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Search of human proteins with 13375913
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|13375913 transmembrane protein 149 [Homo sapiens]
(355 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|13375913 transmembrane protein 149 [Homo sapiens] 750 0.0
gi|122937343 platelet endothelial aggregation receptor 1 [Homo s... 39 0.007
gi|45387958 1A6/DRIM (down-regulated in metastasis) interacting ... 38 0.012
gi|239753545 PREDICTED: similar to hCG2041452 [Homo sapiens] 35 0.078
gi|239748117 PREDICTED: hypothetical protein XP_002346556 [Homo ... 35 0.078
gi|239742016 PREDICTED: hypothetical protein XP_002342392 [Homo ... 35 0.078
gi|163965366 nascent polypeptide-associated complex alpha subuni... 35 0.078
gi|110832843 TBP-associated factor 4 [Homo sapiens] 35 0.10
gi|14195601 protein phosphatase 1, regulatory (inhibitor) subuni... 35 0.10
gi|4505319 protein phosphatase 1, regulatory (inhibitor) subunit... 35 0.10
gi|52630419 sterol regulatory element binding transcription fact... 35 0.13
gi|22547195 sterol regulatory element binding transcription fact... 35 0.13
gi|56549666 tyrosine kinase, non-receptor, 2 isoform 1 [Homo sap... 35 0.13
gi|58331191 tyrosine kinase, non-receptor, 2 isoform 2 [Homo sap... 35 0.13
gi|126366080 regulator of G-protein signaling 9 isoform 2 [Homo ... 34 0.17
gi|126365761 regulator of G-protein signaling 9 isoform 1 [Homo ... 34 0.17
gi|9507203 triggering receptor expressed on myeloid cells 2 prec... 34 0.17
gi|221316699 maltase-glucoamylase [Homo sapiens] 34 0.23
gi|47078278 choline kinase alpha isoform b [Homo sapiens] 34 0.23
gi|47078276 choline kinase alpha isoform a [Homo sapiens] 34 0.23
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 34 0.23
gi|209571519 cysteine rich BMP regulator 2 isoform 1 [Homo sapiens] 34 0.23
gi|40353729 Ras and Rab interactor 3 [Homo sapiens] 34 0.23
gi|33356148 formin-like 1 [Homo sapiens] 34 0.23
gi|239747126 PREDICTED: hypothetical protein XP_002343919 [Homo ... 33 0.30
gi|239757337 PREDICTED: hypothetical protein XP_002345251 [Homo ... 33 0.39
gi|239751874 PREDICTED: hypothetical protein XP_002348034 [Homo ... 33 0.39
gi|239746363 PREDICTED: hypothetical protein XP_002343737 [Homo ... 33 0.39
gi|157384971 cyclin G associated kinase [Homo sapiens] 33 0.39
gi|41281612 zinc finger protein 828 [Homo sapiens] 33 0.39
>gi|13375913 transmembrane protein 149 [Homo sapiens]
Length = 355
Score = 750 bits (1937), Expect = 0.0
Identities = 355/355 (100%), Positives = 355/355 (100%)
Query: 1 MGPGRCLLTALLLLALAPPPEASQYCGRLEYWNPDNKCCSSCLQRFGPPPCPDYEFRENC 60
MGPGRCLLTALLLLALAPPPEASQYCGRLEYWNPDNKCCSSCLQRFGPPPCPDYEFRENC
Sbjct: 1 MGPGRCLLTALLLLALAPPPEASQYCGRLEYWNPDNKCCSSCLQRFGPPPCPDYEFRENC 60
Query: 61 GLNDHGDFVTPPFRKCSSGQCNPDGAELCSPCGGGAVTPTPAAGGGRTPWRCRERPVPAK 120
GLNDHGDFVTPPFRKCSSGQCNPDGAELCSPCGGGAVTPTPAAGGGRTPWRCRERPVPAK
Sbjct: 61 GLNDHGDFVTPPFRKCSSGQCNPDGAELCSPCGGGAVTPTPAAGGGRTPWRCRERPVPAK 120
Query: 121 GHCPLTPGNPGAPSSQERSSPASSIAWRTPEPVPQQAWPNFLPLVVLVLLLTLAVIAILL 180
GHCPLTPGNPGAPSSQERSSPASSIAWRTPEPVPQQAWPNFLPLVVLVLLLTLAVIAILL
Sbjct: 121 GHCPLTPGNPGAPSSQERSSPASSIAWRTPEPVPQQAWPNFLPLVVLVLLLTLAVIAILL 180
Query: 181 FILLWHLCWPKEKADPYPYPGLVCGVPNTHTPSSSHLSSPGALETGDTWKEASLLPLLSR 240
FILLWHLCWPKEKADPYPYPGLVCGVPNTHTPSSSHLSSPGALETGDTWKEASLLPLLSR
Sbjct: 181 FILLWHLCWPKEKADPYPYPGLVCGVPNTHTPSSSHLSSPGALETGDTWKEASLLPLLSR 240
Query: 241 ELSSLASQPLSRLLDELEVLEELIVLLDPEPGPGGGMAHGTTRHLAARYGLPAAWSTFAY 300
ELSSLASQPLSRLLDELEVLEELIVLLDPEPGPGGGMAHGTTRHLAARYGLPAAWSTFAY
Sbjct: 241 ELSSLASQPLSRLLDELEVLEELIVLLDPEPGPGGGMAHGTTRHLAARYGLPAAWSTFAY 300
Query: 301 SLRPSRSPLRALIEMVVAREPSASLGQLGTHLAQLGRADALRVLSKLGSSGVCWA 355
SLRPSRSPLRALIEMVVAREPSASLGQLGTHLAQLGRADALRVLSKLGSSGVCWA
Sbjct: 301 SLRPSRSPLRALIEMVVAREPSASLGQLGTHLAQLGRADALRVLSKLGSSGVCWA 355
>gi|122937343 platelet endothelial aggregation receptor 1 [Homo
sapiens]
Length = 1037
Score = 38.9 bits (89), Expect = 0.007
Identities = 49/183 (26%), Positives = 67/183 (36%), Gaps = 36/183 (19%)
Query: 26 CGRLEYWNPDNKCCSSCLQRFGPP---PCPDYEFRENCGLN---DHGDFVTPPFRKCSSG 79
C + +P N C GP PCP + ENC HG G
Sbjct: 624 CANHSFCHPSNGTCYCLAGWTGPDCSQPCPPGHWGENCAQTCQCHHG------------G 671
Query: 80 QCNP-DGAELCS------PCGGGAVTPTPAAGGGRTPWRCR--ERPVPAKGHCPLTPGNP 130
C+P DG+ +C C G T A + P +C E+ P G C PG+
Sbjct: 672 TCHPQDGSCICPLGWTGHHCLEGCPLGTFGANCSQ-PCQCGPGEKCHPETGACVCPPGHS 730
Query: 131 GAPSSQERSSPASSIAWRTPEPVPQQAWPNFLPLVVLVLLLTLAVIAILLFILLWHLCWP 190
GAP P T P A+ + ++ + +L +L V + LFI H W
Sbjct: 731 GAPCRIGIQEPF------TVMPTTPVAYNSLGAVIGIAVLGSLVVALVALFIGYRH--WQ 782
Query: 191 KEK 193
K K
Sbjct: 783 KGK 785
>gi|45387958 1A6/DRIM (down-regulated in metastasis) interacting
protein [Homo sapiens]
Length = 1209
Score = 38.1 bits (87), Expect = 0.012
Identities = 31/75 (41%), Positives = 35/75 (46%), Gaps = 16/75 (21%)
Query: 73 FRKCSSGQCNPDGAELCSPCGGGAVTPTPAAGGGRTPWRCRERPVPAKGHCP-------L 125
+ K SG P GA P GA P+ AAGGG RC+ P PA G P L
Sbjct: 140 YLKAKSGAAQP-GAGGAQP---GAAQPSRAAGGGS---RCK--PEPAHGSAPTALCPPKL 190
Query: 126 TPGNPGAPSSQERSS 140
PG+ G P SQ SS
Sbjct: 191 VPGSGGGPGSQVGSS 205
>gi|239753545 PREDICTED: similar to hCG2041452 [Homo sapiens]
Length = 410
Score = 35.4 bits (80), Expect = 0.078
Identities = 20/58 (34%), Positives = 24/58 (41%), Gaps = 6/58 (10%)
Query: 93 GGGAVTPTPAAGGGRTPWRCRERPVPAKGHCPLTPGNPGAPSSQERSSPASSIAWRTP 150
G G T GGG RP P + P +PG P P R +PAS A +P
Sbjct: 51 GSGGAVGTGRRGGGAA------RPAPVRRGSPSSPGEPYRPEEDSRMTPASPEARTSP 102
>gi|239748117 PREDICTED: hypothetical protein XP_002346556 [Homo
sapiens]
Length = 410
Score = 35.4 bits (80), Expect = 0.078
Identities = 20/58 (34%), Positives = 24/58 (41%), Gaps = 6/58 (10%)
Query: 93 GGGAVTPTPAAGGGRTPWRCRERPVPAKGHCPLTPGNPGAPSSQERSSPASSIAWRTP 150
G G T GGG RP P + P +PG P P R +PAS A +P
Sbjct: 51 GSGGAVGTGRRGGGAA------RPAPVRRGSPSSPGEPYRPEEDSRMTPASPEARTSP 102
>gi|239742016 PREDICTED: hypothetical protein XP_002342392 [Homo
sapiens]
Length = 410
Score = 35.4 bits (80), Expect = 0.078
Identities = 20/58 (34%), Positives = 24/58 (41%), Gaps = 6/58 (10%)
Query: 93 GGGAVTPTPAAGGGRTPWRCRERPVPAKGHCPLTPGNPGAPSSQERSSPASSIAWRTP 150
G G T GGG RP P + P +PG P P R +PAS A +P
Sbjct: 51 GSGGAVGTGRRGGGAA------RPAPVRRGSPSSPGEPYRPEEDSRMTPASPEARTSP 102
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 35.4 bits (80), Expect = 0.078
Identities = 32/91 (35%), Positives = 35/91 (38%), Gaps = 12/91 (13%)
Query: 69 VTPPFRKCS-------SGQCNPDGAELCSPCGGGAVTPTPAAGGGRTPWRCRERPVPAKG 121
VTPP K S G P A SP G A TP P G TP P P G
Sbjct: 1014 VTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPK-GAPTTP--AATLPSPKGG 1070
Query: 122 HCPLTPGNPGAPSSQERSSPASSIAWRTPEP 152
P TP GAP+ + P+ TP P
Sbjct: 1071 --PATPSLKGAPTPPAATPPSPKGGPATPSP 1099
Score = 28.9 bits (63), Expect = 7.3
Identities = 28/86 (32%), Positives = 31/86 (36%), Gaps = 16/86 (18%)
Query: 72 PFRKCSSGQCNPDGAELCSPCGGGAV-----TPTPAAGGGRTPWRCRERPVPAKGHCPLT 126
P G P A SP GG A PTP A TP P P G P T
Sbjct: 931 PASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAA---TP------PSPKGG--PAT 979
Query: 127 PGNPGAPSSQERSSPASSIAWRTPEP 152
P GAP+ + P+ TP P
Sbjct: 980 PSPKGAPTPPAATPPSPKGGPATPSP 1005
Score = 28.9 bits (63), Expect = 7.3
Identities = 35/119 (29%), Positives = 42/119 (35%), Gaps = 26/119 (21%)
Query: 70 TPPFRKCS-------SGQCNPDGAELCSPCGGGAV-----TPTPAA-------GGGRTPW 110
TPP K S G A L SP GG A PTP A GG TP
Sbjct: 1039 TPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATP- 1097
Query: 111 RCRERPVPAKGHCP------LTPGNPGAPSSQERSSPASSIAWRTPEPVPQQAWPNFLP 163
+ P+P P TP + GAP++ + P+ TP P P P
Sbjct: 1098 SPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATP 1156
Score = 28.9 bits (63), Expect = 7.3
Identities = 27/98 (27%), Positives = 34/98 (34%), Gaps = 8/98 (8%)
Query: 70 TPPFRKCSSGQCNPDGAEL----CSPCGGGAVTPTPAAGGGRTPWRCRERPVPAKGHCPL 125
TPP K +P GA + P G + P G TP P P G
Sbjct: 1086 TPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTP--AATPPSPKGGLA-- 1141
Query: 126 TPGNPGAPSSQERSSPASSIAWRTPEPVPQQAWPNFLP 163
TP GAP++ + P+ TP P P P
Sbjct: 1142 TPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATP 1179
Score = 28.5 bits (62), Expect = 9.6
Identities = 29/99 (29%), Positives = 34/99 (34%), Gaps = 10/99 (10%)
Query: 70 TPPFRKCSSGQCNPDGAELCSPCG-----GGAVTPTPAAGGGRTPWRCRERPVPAKGHCP 124
TPP K P GA GG TP+P G TP P P G
Sbjct: 1155 TPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPK-GAPTTP--AATPPSPKGGLA- 1210
Query: 125 LTPGNPGAPSSQERSSPASSIAWRTPEPVPQQAWPNFLP 163
TP GAP++ + P+ TP P P P
Sbjct: 1211 -TPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATP 1248
Score = 28.5 bits (62), Expect = 9.6
Identities = 22/76 (28%), Positives = 27/76 (35%), Gaps = 16/76 (21%)
Query: 66 GDFVTPPFRKCSSGQCNPDGAELCSPCGGGAVTPTPAAGGGRTPWRCRERPVPAKGHCPL 125
G TPP + G NP SP GG A +P A P P P
Sbjct: 1276 GGLATPPHK----GAPNPAVVTPPSPKGGPATSPPKGA------------PTPPAATPPS 1319
Query: 126 TPGNPGAPSSQERSSP 141
G+PG P + +P
Sbjct: 1320 PKGSPGTPPPKGAPTP 1335
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 35.0 bits (79), Expect = 0.10
Identities = 23/70 (32%), Positives = 28/70 (40%), Gaps = 2/70 (2%)
Query: 85 GAELCSPCGG--GAVTPTPAAGGGRTPWRCRERPVPAKGHCPLTPGNPGAPSSQERSSPA 142
GA +P G GA P AG R +RP P PL P P P+++ R P
Sbjct: 72 GAGPAAPAEGAPGAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPE 131
Query: 143 SSIAWRTPEP 152
S P P
Sbjct: 132 GSAGSCAPVP 141
Score = 30.4 bits (67), Expect = 2.5
Identities = 37/137 (27%), Positives = 48/137 (35%), Gaps = 6/137 (4%)
Query: 71 PPFRKCSSGQCNPDGAELCSPCGGGAVTPTPAAGGGRTPWRCRERPVPAKGHCPLTPGNP 130
PP + P G P AV P PAA P PA G G P
Sbjct: 271 PPPPPAPATLARPPGHPAGPPTAAPAV-PPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQP 329
Query: 131 GAPSSQERSSPASSIAWRTPEPVPQQAWPNFLPLVVLVLLLTLAVIAILLFILLWHLCWP 190
G ++ ++PA + +P+ V Q A P L T A + I + P
Sbjct: 330 GPGAA--AAAPAPGVKAESPKRVVQAAPPAAQTLAASGPASTAASMVIGPTM---QGALP 384
Query: 191 KEKADPYPYPGLVCGVP 207
A P P PG G+P
Sbjct: 385 SPAAVPPPAPGTPTGLP 401
>gi|14195601 protein phosphatase 1, regulatory (inhibitor) subunit
12B isoform b [Homo sapiens]
Length = 998
Score = 35.0 bits (79), Expect = 0.10
Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 6/65 (9%)
Query: 96 AVTPTPAAGGGRTPW--RCRERPVPAKGHCPLTPGNPGAPSSQERSSP----ASSIAWRT 149
+ P AG G+ PW E P+ + CP P P P+S S P +S + W
Sbjct: 694 SAVPATEAGEGQQPWGRSLDEEPICHRLRCPAQPDKPTTPASPSTSRPSLYTSSHLLWTN 753
Query: 150 PEPVP 154
VP
Sbjct: 754 RFSVP 758
>gi|4505319 protein phosphatase 1, regulatory (inhibitor) subunit
12B isoform a [Homo sapiens]
Length = 982
Score = 35.0 bits (79), Expect = 0.10
Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 6/65 (9%)
Query: 96 AVTPTPAAGGGRTPW--RCRERPVPAKGHCPLTPGNPGAPSSQERSSP----ASSIAWRT 149
+ P AG G+ PW E P+ + CP P P P+S S P +S + W
Sbjct: 694 SAVPATEAGEGQQPWGRSLDEEPICHRLRCPAQPDKPTTPASPSTSRPSLYTSSHLLWTN 753
Query: 150 PEPVP 154
VP
Sbjct: 754 RFSVP 758
>gi|52630419 sterol regulatory element binding transcription factor
1 isoform a [Homo sapiens]
Length = 1177
Score = 34.7 bits (78), Expect = 0.13
Identities = 28/113 (24%), Positives = 42/113 (37%), Gaps = 15/113 (13%)
Query: 63 NDHGDFVTPPFRKCSSGQCNPDGAELCSPCGGGAVTPTPAA---------GGGRTPWRCR 113
+D PP+ +G +P + SP G+++P PA G +
Sbjct: 71 SDFPGLFDPPYAGSGAGGTDPASPDTSSP---GSLSPPPATLSSSLEAFLSGPQAAPSPL 127
Query: 114 ERPVPAKGHCPLTPGNPG---APSSQERSSPASSIAWRTPEPVPQQAWPNFLP 163
P PA + P P P +E S P S + TP+P+P P P
Sbjct: 128 SPPQPAPTPLKMYPSMPAFSPGPGIKEESVPLSILQTPTPQPLPGALLPQSFP 180
>gi|22547195 sterol regulatory element binding transcription factor
1 isoform b [Homo sapiens]
Length = 1147
Score = 34.7 bits (78), Expect = 0.13
Identities = 28/113 (24%), Positives = 42/113 (37%), Gaps = 15/113 (13%)
Query: 63 NDHGDFVTPPFRKCSSGQCNPDGAELCSPCGGGAVTPTPAA---------GGGRTPWRCR 113
+D PP+ +G +P + SP G+++P PA G +
Sbjct: 41 SDFPGLFDPPYAGSGAGGTDPASPDTSSP---GSLSPPPATLSSSLEAFLSGPQAAPSPL 97
Query: 114 ERPVPAKGHCPLTPGNPG---APSSQERSSPASSIAWRTPEPVPQQAWPNFLP 163
P PA + P P P +E S P S + TP+P+P P P
Sbjct: 98 SPPQPAPTPLKMYPSMPAFSPGPGIKEESVPLSILQTPTPQPLPGALLPQSFP 150
>gi|56549666 tyrosine kinase, non-receptor, 2 isoform 1 [Homo
sapiens]
Length = 1038
Score = 34.7 bits (78), Expect = 0.13
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
Query: 87 ELCSPCGGGAVTPTPAAGGG---RTPWRCRERPVPAKGHCPLTPGNPGAPSSQERSSPAS 143
+L +P G A P+P+ GG + P R P P + H L+P PG + + PAS
Sbjct: 717 QLQAPAGSPA--PSPSPGGDDKPQVPPRVPIPPRPTRPHVQLSPAPPGEEETSQWPGPAS 774
Query: 144 SIAWRTPEPVPQQAWPNFLPLV 165
EP+ Q PLV
Sbjct: 775 PPRVPPREPLSPQGSRTPSPLV 796
>gi|58331191 tyrosine kinase, non-receptor, 2 isoform 2 [Homo
sapiens]
Length = 1086
Score = 34.7 bits (78), Expect = 0.13
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
Query: 87 ELCSPCGGGAVTPTPAAGGG---RTPWRCRERPVPAKGHCPLTPGNPGAPSSQERSSPAS 143
+L +P G A P+P+ GG + P R P P + H L+P PG + + PAS
Sbjct: 795 QLQAPAGSPA--PSPSPGGDDKPQVPPRVPIPPRPTRPHVQLSPAPPGEEETSQWPGPAS 852
Query: 144 SIAWRTPEPVPQQAWPNFLPLV 165
EP+ Q PLV
Sbjct: 853 PPRVPPREPLSPQGSRTPSPLV 874
>gi|126366080 regulator of G-protein signaling 9 isoform 2 [Homo
sapiens]
Length = 671
Score = 34.3 bits (77), Expect = 0.17
Identities = 33/107 (30%), Positives = 48/107 (44%), Gaps = 8/107 (7%)
Query: 222 ALETGDTWKEASLLPLLSRELSSLASQPLSRLLDELEVLEELIVLLDPEPGPGGGMAHGT 281
A+E +T K++S LP + R L S S + R L+E E +D PG MA
Sbjct: 417 AIEPQETTKKSSTLPFMRRHLRSSPSPVILRQLEEEAKAREAANTVDITQ-PGQHMA--P 473
Query: 282 TRHLAARYGL---PAAWSTFAYSLRPSRSPLRALIEMVVAREPSASL 325
+ HL G P+ S F+ S R R P + + R PS ++
Sbjct: 474 SPHLTVYTGTCMPPSPSSPFSSSCRSPRKPFASPSRFI--RRPSTTI 518
>gi|126365761 regulator of G-protein signaling 9 isoform 1 [Homo
sapiens]
Length = 674
Score = 34.3 bits (77), Expect = 0.17
Identities = 33/107 (30%), Positives = 48/107 (44%), Gaps = 8/107 (7%)
Query: 222 ALETGDTWKEASLLPLLSRELSSLASQPLSRLLDELEVLEELIVLLDPEPGPGGGMAHGT 281
A+E +T K++S LP + R L S S + R L+E E +D PG MA
Sbjct: 420 AIEPQETTKKSSTLPFMRRHLRSSPSPVILRQLEEEAKAREAANTVDITQ-PGQHMA--P 476
Query: 282 TRHLAARYGL---PAAWSTFAYSLRPSRSPLRALIEMVVAREPSASL 325
+ HL G P+ S F+ S R R P + + R PS ++
Sbjct: 477 SPHLTVYTGTCMPPSPSSPFSSSCRSPRKPFASPSRFI--RRPSTTI 521
>gi|9507203 triggering receptor expressed on myeloid cells 2
precursor [Homo sapiens]
Length = 230
Score = 34.3 bits (77), Expect = 0.17
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
Query: 161 FLPLVVLVLLLTLAVIAILLFILLWHLCWPKEKADPYPYPGLVCGVPNTHTPSSSHLSSP 220
F P +L+LL + +I IL LW W +K +P L CG H P + P
Sbjct: 170 FPPTSILLLLACIFLIKILAASALWAAAWHGQKPGTHPPSELDCG----HDPGYQLQTLP 225
Query: 221 GALET 225
G +T
Sbjct: 226 GLRDT 230
>gi|221316699 maltase-glucoamylase [Homo sapiens]
Length = 1857
Score = 33.9 bits (76), Expect = 0.23
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Query: 162 LPLVVLVLLLTLAVIAILLFILLWHLCWPKEKADP----YPYPGLVCGVPNTHTPSSSHL 217
L +V+ VLLL L +I+I+L +LL DP P PG G P+ T ++H
Sbjct: 12 LEIVLSVLLLVLFIISIVLIVLLAKESLKSTAPDPGTTGTPDPG-TTGTPDPGTTGTTHA 70
Query: 218 SSPGALETGDT 228
+ G + G T
Sbjct: 71 RTTGPPDPGTT 81
>gi|47078278 choline kinase alpha isoform b [Homo sapiens]
Length = 439
Score = 33.9 bits (76), Expect = 0.23
Identities = 21/80 (26%), Positives = 27/80 (33%), Gaps = 14/80 (17%)
Query: 76 CSSGQCNPDGAELCSPCGGGAVTPTPAAG--------------GGRTPWRCRERPVPAKG 121
C+ G+ P L CG G+ P P G GG+ P P P
Sbjct: 6 CTGGEAEPSPLGLLLSCGSGSAAPAPGVGQQRDAASDLESKQLGGQQPPLALPPPPPLPL 65
Query: 122 HCPLTPGNPGAPSSQERSSP 141
PL P P + E+ P
Sbjct: 66 PLPLPQPPPPQPPADEQPEP 85
>gi|47078276 choline kinase alpha isoform a [Homo sapiens]
Length = 457
Score = 33.9 bits (76), Expect = 0.23
Identities = 21/80 (26%), Positives = 27/80 (33%), Gaps = 14/80 (17%)
Query: 76 CSSGQCNPDGAELCSPCGGGAVTPTPAAG--------------GGRTPWRCRERPVPAKG 121
C+ G+ P L CG G+ P P G GG+ P P P
Sbjct: 6 CTGGEAEPSPLGLLLSCGSGSAAPAPGVGQQRDAASDLESKQLGGQQPPLALPPPPPLPL 65
Query: 122 HCPLTPGNPGAPSSQERSSP 141
PL P P + E+ P
Sbjct: 66 PLPLPQPPPPQPPADEQPEP 85
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 33.9 bits (76), Expect = 0.23
Identities = 39/151 (25%), Positives = 56/151 (37%), Gaps = 23/151 (15%)
Query: 18 PPPEASQYCGRLEYWNPDNKCCSSCLQRFGPPPCPDYEFRENCGLNDHGDFVTPPFRKCS 77
PPP + Y G E P L+ GP P P G ++ TPP +K
Sbjct: 831 PPPYLASYPGFPENGAPGPPISRFPLEEPGPRPLP-----WPPGSDEVAKIQTPPPKKEP 885
Query: 78 SGQCNPDGAELCSP---------CGGGAVTPTPAAGGGRTPWRCRERPVPAKGHCPLTPG 128
+ + A+L P G G P P RT R RP ++ P P
Sbjct: 886 PKE---ETAQLTGPEAGRKPARGVGSGGQGPPPPRRESRTETRWGPRPGSSRRGIP--PE 940
Query: 129 NPGAPSSQ----ERSSPASSIAWRTPEPVPQ 155
PGAP + ++ P + + P+P+ Q
Sbjct: 941 EPGAPPRRAGPIKKPPPPTKVEELPPKPLEQ 971
>gi|209571519 cysteine rich BMP regulator 2 isoform 1 [Homo sapiens]
Length = 1503
Score = 33.9 bits (76), Expect = 0.23
Identities = 29/110 (26%), Positives = 37/110 (33%), Gaps = 14/110 (12%)
Query: 32 WNPDNKCCSSCLQRFGPPPCPDYEFRENCGLNDHGDFVTPP--------FRKCSSGQCNP 83
W P + CSSC+ G C + +C G P RK G+
Sbjct: 909 WVPPDSACSSCVCHEGVVTCARIQCISSCAQPRQGPHDCCPQCSDCEHEGRKYEPGESFQ 968
Query: 84 DGAELCSPCGGGAVTPTPAAGGGRTPWRCRERPVPAKGHCPLTPGNPGAP 133
GA+ C C P P G RC R P+ CP + P P
Sbjct: 969 PGADPCEVC---ICEPQPE---GPPSLRCHRRQCPSLVGCPPSQLLPPGP 1012
>gi|40353729 Ras and Rab interactor 3 [Homo sapiens]
Length = 985
Score = 33.9 bits (76), Expect = 0.23
Identities = 30/93 (32%), Positives = 35/93 (37%), Gaps = 4/93 (4%)
Query: 63 NDHGDFVTPPF-RKCSSGQCNPDGAELCSPCGGGAVTPTPAAGGGRTPWRCRERPVPAKG 121
ND FV P F CSS P C + PT A + W R RP P
Sbjct: 229 NDRLWFVNPIFIEDCSSAL--PTDQPPLGNCPARPLPPTSDATSPTSRWAPR-RPPPPPP 285
Query: 122 HCPLTPGNPGAPSSQERSSPASSIAWRTPEPVP 154
PL P +P P +PA + T PVP
Sbjct: 286 VLPLQPCSPAQPPVLPALAPAPACPLPTSPPVP 318
>gi|33356148 formin-like 1 [Homo sapiens]
Length = 1100
Score = 33.9 bits (76), Expect = 0.23
Identities = 28/89 (31%), Positives = 34/89 (38%), Gaps = 13/89 (14%)
Query: 66 GDFVTPPFRKCSSGQCNPDGAELCSPCGGGAVTPTPAAGGGRTPWRCRERPVPAKGHCPL 125
GD TP +G +PD A P G A P P G +P +E P A P
Sbjct: 514 GDAPTPGV---PTGSPSPDLAPAAEPAPGAAPPPPPPLPGLPSP---QEAPPSAPPQAPP 567
Query: 126 TPGNPGAPSSQERSSPASSIAWRTPEPVP 154
PG+P P PA + P P P
Sbjct: 568 LPGSPEPP-------PAPPLPGDLPPPPP 589
Score = 32.7 bits (73), Expect = 0.51
Identities = 25/79 (31%), Positives = 30/79 (37%), Gaps = 4/79 (5%)
Query: 88 LCSPCGGGAVTPTPAAGGGRTPWRCRERPVPAKGHCPLTPGNPGAPSSQER---SSPASS 144
+ +P GG A TP G P P P P PG PS QE + P +
Sbjct: 508 VATPSGGDAPTPGVPTGSPSPDLAPAAEPAPGAAPPP-PPPLPGLPSPQEAPPSAPPQAP 566
Query: 145 IAWRTPEPVPQQAWPNFLP 163
+PEP P P LP
Sbjct: 567 PLPGSPEPPPAPPLPGDLP 585
>gi|239747126 PREDICTED: hypothetical protein XP_002343919 [Homo
sapiens]
Length = 185
Score = 33.5 bits (75), Expect = 0.30
Identities = 39/146 (26%), Positives = 55/146 (37%), Gaps = 28/146 (19%)
Query: 93 GGGAVTPTPAAGGGRTPWRCRERPVPAKGHCPLTPGNPGAPSSQERSSP--ASSIAWRTP 150
G V P P+ PW C + CP P P A ++ W P
Sbjct: 9 GPSLVLPCPSM-----PWPCPHPALALHWSCPAL----ALPWPWPCLLPGLAFALPWPDP 59
Query: 151 EPVPQQAWP-NFLPLVVLVLLLT-------LAVIAILLFILLW-------HLCWPKEKAD 195
P WP L ++ +L+ LA+ +L+ LLW LC+P
Sbjct: 60 RPTESMKWPWTCLAILCPCPVLSPPCSGPVLALALLLVLPLLWPCSVFGHALCYPSPALP 119
Query: 196 -PYPYPGLVCGVPNTHTPSSSHLSSP 220
P+PY GL+ P HT + S L+ P
Sbjct: 120 WPWPYHGLLLPWPG-HTLAFSTLALP 144
>gi|239757337 PREDICTED: hypothetical protein XP_002345251 [Homo
sapiens]
Length = 330
Score = 33.1 bits (74), Expect = 0.39
Identities = 28/82 (34%), Positives = 34/82 (41%), Gaps = 15/82 (18%)
Query: 75 KCSSGQCNPDGAELCSPCGGGAVTPTPA-----AGGGRTPWRCRERPVPAKGHCPLTPGN 129
K SSG +GA C GGG PA +GGG PWR R P +
Sbjct: 56 KDSSGSAG-EGAADCGTAGGGGERGAPAGGARGSGGGPPPWRLRNEVSP--------KAS 106
Query: 130 PGAPS-SQERSSPASSIAWRTP 150
P P+ S R SP+ + R P
Sbjct: 107 PPRPTCSVCRKSPSGAEMDRAP 128
>gi|239751874 PREDICTED: hypothetical protein XP_002348034 [Homo
sapiens]
Length = 330
Score = 33.1 bits (74), Expect = 0.39
Identities = 28/82 (34%), Positives = 34/82 (41%), Gaps = 15/82 (18%)
Query: 75 KCSSGQCNPDGAELCSPCGGGAVTPTPA-----AGGGRTPWRCRERPVPAKGHCPLTPGN 129
K SSG +GA C GGG PA +GGG PWR R P +
Sbjct: 56 KDSSGSAG-EGAADCGTAGGGGERGAPAGGARGSGGGPPPWRLRNEVSP--------KAS 106
Query: 130 PGAPS-SQERSSPASSIAWRTP 150
P P+ S R SP+ + R P
Sbjct: 107 PPRPTCSVCRKSPSGAEMDRAP 128
>gi|239746363 PREDICTED: hypothetical protein XP_002343737 [Homo
sapiens]
Length = 179
Score = 33.1 bits (74), Expect = 0.39
Identities = 28/82 (34%), Positives = 34/82 (41%), Gaps = 15/82 (18%)
Query: 75 KCSSGQCNPDGAELCSPCGGGAVTPTPA-----AGGGRTPWRCRERPVPAKGHCPLTPGN 129
K SSG +GA C GGG PA +GGG PWR R P +
Sbjct: 56 KDSSGSAG-EGAADCGTAGGGGERGAPAGGARGSGGGPPPWRLRNEVSP--------KAS 106
Query: 130 PGAPS-SQERSSPASSIAWRTP 150
P P+ S R SP+ + R P
Sbjct: 107 PPRPTCSVCRKSPSGAEMDRAP 128
>gi|157384971 cyclin G associated kinase [Homo sapiens]
Length = 1311
Score = 33.1 bits (74), Expect = 0.39
Identities = 35/137 (25%), Positives = 49/137 (35%), Gaps = 32/137 (23%)
Query: 48 PPPCPDYEFRENCGLNDHGDFVTPPFRKCSSGQCNPD---GAELCSPCGGGAVTPTPAAG 104
PPP +F GD P K ++ NPD G + AV PTPA
Sbjct: 1003 PPPSCSADFLHL------GDLPGEP-SKMTASSSNPDLLGGWAAWTETAASAVAPTPATE 1055
Query: 105 G-------------GRTPWRCRERPVPAKGHCPLTPGNPGAPSS--------QERSSPAS 143
G + W + P P L+ G G+P+ + ++P
Sbjct: 1056 GPLFSPGGQPAPCGSQASWTKSQNPDPFADLGDLSSGLQGSPAGFPPGGFIPKTATTPKG 1115
Query: 144 SIAWRTPEPVPQQA-WP 159
S +W+T P Q A WP
Sbjct: 1116 SSSWQTSRPPAQGASWP 1132
>gi|41281612 zinc finger protein 828 [Homo sapiens]
Length = 812
Score = 33.1 bits (74), Expect = 0.39
Identities = 35/136 (25%), Positives = 52/136 (38%), Gaps = 33/136 (24%)
Query: 19 PPEASQYCGRLEYWNPDNKCCSSCLQRFGPPPCPDYEFRENCGLNDHGDFVTPPFRKCSS 78
PP AS +P++ ++ + +GP P E R++ +P RK S
Sbjct: 239 PPSAS---------SPESPVLAASPEPWGPSPAASPESRKSARTT------SPEPRKPSP 283
Query: 79 GQCNPDGAELCSPCGGGAVTPTPAAGGGRTPWRCRERPVPAKGHCPLTPGNPGAPSSQER 138
+ E P AV+P P RP PA PG PG+P +
Sbjct: 284 SE----SPEPWKPFP--AVSPEP------------RRPAPAVSPGSWKPGPPGSPRPWKS 325
Query: 139 SSPASSIAWRTPEPVP 154
+ ASS W+ +P P
Sbjct: 326 NPSASSGPWKPAKPAP 341
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.137 0.455
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,834,623
Number of Sequences: 37866
Number of extensions: 1245714
Number of successful extensions: 5759
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 182
Number of HSP's that attempted gapping in prelim test: 5478
Number of HSP's gapped (non-prelim): 579
length of query: 355
length of database: 18,247,518
effective HSP length: 103
effective length of query: 252
effective length of database: 14,347,320
effective search space: 3615524640
effective search space used: 3615524640
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.