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Search of human proteins with 48255909
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|48255909 basic helix-loop-helix transcription factor 15
[Homo sapiens]
(199 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|48255909 basic helix-loop-helix transcription factor 15 [Homo... 400 e-112
gi|148922889 scleraxis homolog B [Homo sapiens] 181 5e-46
gi|186972126 scleraxis homolog A [Homo sapiens] 181 5e-46
gi|12545384 basic helix-loop-helix transcription factor HAND2 [H... 78 4e-15
gi|116805332 musculin [Homo sapiens] 78 6e-15
gi|4507741 twist [Homo sapiens] 77 1e-14
gi|4758506 basic helix-loop-helix transcription factor HAND1 [Ho... 76 2e-14
gi|38202237 transcription factor 21 [Homo sapiens] 72 2e-13
gi|38202239 transcription factor 21 [Homo sapiens] 72 2e-13
gi|29126247 basic helix-loop-helix family, member a15 [Homo sapi... 70 2e-12
gi|21553337 atonal homolog 7 [Homo sapiens] 69 2e-12
gi|4507363 T-cell acute lymphocytic leukemia 1 [Homo sapiens] 68 4e-12
gi|17981708 twist homolog 2 [Homo sapiens] 66 2e-11
gi|5031943 nescient helix loop helix 1 [Homo sapiens] 65 3e-11
gi|34147558 lymphoblastic leukemia derived sequence 1 [Homo sapi... 65 5e-11
gi|239749439 PREDICTED: similar to transcription factor 23 [Homo... 64 6e-11
gi|239743573 PREDICTED: similar to transcription factor 23 [Homo... 64 6e-11
gi|68989258 neurogenin 3 [Homo sapiens] 64 1e-10
gi|30039710 pancreas specific transcription factor, 1a [Homo sap... 63 1e-10
gi|31077092 neurogenin 2 [Homo sapiens] 63 1e-10
gi|4885619 T-cell acute lymphocytic leukemia 2 [Homo sapiens] 62 4e-10
gi|98986461 neurogenic differentiation 2 [Homo sapiens] 61 5e-10
gi|237757328 oligodendrocyte transcription factor 1 [Homo sapiens] 61 7e-10
gi|23097242 nephew of atonal 3 [Homo sapiens] 61 7e-10
gi|239754900 PREDICTED: similar to transcription factor 23 [Homo... 59 2e-09
gi|38455396 neurogenin 1 [Homo sapiens] 59 3e-09
gi|27475985 neurogenic differentiation 6 [Homo sapiens] 59 3e-09
gi|161484632 nescient helix loop helix 2 [Homo sapiens] 59 4e-09
gi|5031945 nescient helix loop helix 2 [Homo sapiens] 59 4e-09
gi|121114306 neurogenic differentiation 1 [Homo sapiens] 58 6e-09
>gi|48255909 basic helix-loop-helix transcription factor 15 [Homo
sapiens]
Length = 199
Score = 400 bits (1029), Expect = e-112
Identities = 199/199 (100%), Positives = 199/199 (100%)
Query: 1 MAFALLRPVGAHVLYPDVRLLSEDEENRSESDASDQSFGCCEGPEAARRGPGPGGGRRAG 60
MAFALLRPVGAHVLYPDVRLLSEDEENRSESDASDQSFGCCEGPEAARRGPGPGGGRRAG
Sbjct: 1 MAFALLRPVGAHVLYPDVRLLSEDEENRSESDASDQSFGCCEGPEAARRGPGPGGGRRAG 60
Query: 61 GGGGAGPVVVVRQRQAANARERDRTQSVNTAFTALRTLIPTEPVDRKLSKIETLRLASSY 120
GGGGAGPVVVVRQRQAANARERDRTQSVNTAFTALRTLIPTEPVDRKLSKIETLRLASSY
Sbjct: 61 GGGGAGPVVVVRQRQAANARERDRTQSVNTAFTALRTLIPTEPVDRKLSKIETLRLASSY 120
Query: 121 IAHLANVLLLGDSADDGQPCFRAAGSAKGAVPAAADGGRQPRSICTFCLSNQRKGGGRRD 180
IAHLANVLLLGDSADDGQPCFRAAGSAKGAVPAAADGGRQPRSICTFCLSNQRKGGGRRD
Sbjct: 121 IAHLANVLLLGDSADDGQPCFRAAGSAKGAVPAAADGGRQPRSICTFCLSNQRKGGGRRD 180
Query: 181 LGGSCLKVRGVAPLRGPRR 199
LGGSCLKVRGVAPLRGPRR
Sbjct: 181 LGGSCLKVRGVAPLRGPRR 199
>gi|148922889 scleraxis homolog B [Homo sapiens]
Length = 201
Score = 181 bits (458), Expect = 5e-46
Identities = 114/197 (57%), Positives = 125/197 (63%), Gaps = 20/197 (10%)
Query: 1 MAFALLRPVG-AHVLYPDVRLLSEDEENRSESDASDQS----FGCCEGPEAARRGPGPGG 55
M+FA LRP LYP+V LSEDE+ S+S SD+ G + ARR G
Sbjct: 1 MSFATLRPAPPGRYLYPEVSPLSEDEDRGSDSSGSDEKPCRVHAARCGLQGARRR---AG 57
Query: 56 GRRAGGGGGAG-PVVVVRQRQAANARERDRTQSVNTAFTALRTLIPTEPVDRKLSKIETL 114
GRRAGGGG G P RQR ANARERDRT SVNTAFTALRTLIPTEP DRKLSKIETL
Sbjct: 58 GRRAGGGGPGGRPGREPRQRHTANARERDRTNSVNTAFTALRTLIPTEPADRKLSKIETL 117
Query: 115 RLASSYIAHLANVLLLGDSADDGQPC------FRAAGSAK----GAVPAAADG-GRQPRS 163
RLASSYI+HL NVLL G++ DGQPC F AA + P A DG QP+
Sbjct: 118 RLASSYISHLGNVLLAGEACGDGQPCHSGPAFFHAARAGSPPPPPPPPPARDGENTQPKQ 177
Query: 164 ICTFCLSNQRKGGGRRD 180
ICTFCLSNQRK RD
Sbjct: 178 ICTFCLSNQRKLSKDRD 194
>gi|186972126 scleraxis homolog A [Homo sapiens]
Length = 201
Score = 181 bits (458), Expect = 5e-46
Identities = 114/197 (57%), Positives = 125/197 (63%), Gaps = 20/197 (10%)
Query: 1 MAFALLRPVG-AHVLYPDVRLLSEDEENRSESDASDQS----FGCCEGPEAARRGPGPGG 55
M+FA LRP LYP+V LSEDE+ S+S SD+ G + ARR G
Sbjct: 1 MSFATLRPAPPGRYLYPEVSPLSEDEDRGSDSSGSDEKPCRVHAARCGLQGARRR---AG 57
Query: 56 GRRAGGGGGAG-PVVVVRQRQAANARERDRTQSVNTAFTALRTLIPTEPVDRKLSKIETL 114
GRRAGGGG G P RQR ANARERDRT SVNTAFTALRTLIPTEP DRKLSKIETL
Sbjct: 58 GRRAGGGGPGGRPGREPRQRHTANARERDRTNSVNTAFTALRTLIPTEPADRKLSKIETL 117
Query: 115 RLASSYIAHLANVLLLGDSADDGQPC------FRAAGSAK----GAVPAAADG-GRQPRS 163
RLASSYI+HL NVLL G++ DGQPC F AA + P A DG QP+
Sbjct: 118 RLASSYISHLGNVLLAGEACGDGQPCHSGPAFFHAARAGSPPPPPPPPPARDGENTQPKQ 177
Query: 164 ICTFCLSNQRKGGGRRD 180
ICTFCLSNQRK RD
Sbjct: 178 ICTFCLSNQRKLSKDRD 194
>gi|12545384 basic helix-loop-helix transcription factor HAND2 [Homo
sapiens]
Length = 217
Score = 78.2 bits (191), Expect = 4e-15
Identities = 48/114 (42%), Positives = 61/114 (53%), Gaps = 5/114 (4%)
Query: 30 ESDASDQSFGCCEGPEAARRGPGPGGGRRAGGGGGAGPVVV-----VRQRQAANARERDR 84
E D S PE A G G GAGP + V++R AN +ER R
Sbjct: 52 EMSPPDYSMALSYSPEYASGAAGLDHSHYGGVPPGAGPPGLGGPRPVKRRGTANRKERRR 111
Query: 85 TQSVNTAFTALRTLIPTEPVDRKLSKIETLRLASSYIAHLANVLLLGDSADDGQ 138
TQS+N+AF LR IP P D KLSKI+TLRLA+SYIA+L ++L D + +
Sbjct: 112 TQSINSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDLLAKDDQNGEAE 165
>gi|116805332 musculin [Homo sapiens]
Length = 206
Score = 77.8 bits (190), Expect = 6e-15
Identities = 49/113 (43%), Positives = 62/113 (54%), Gaps = 9/113 (7%)
Query: 23 EDEENRSESDASDQSFGCCEGPEAARRGPGPGGGRRAGGGG-------GAGPVVVVRQRQ 75
+ EE R + + GC G G GG AGGGG G+ QR
Sbjct: 53 DGEEERCALGTAGSAEGCKRKRPRVAGGGGAGGS--AGGGGKKPLPAKGSAAECKQSQRN 110
Query: 76 AANARERDRTQSVNTAFTALRTLIPTEPVDRKLSKIETLRLASSYIAHLANVL 128
AANARER R + ++ AF+ L+T +P P D KLSK++TLRLASSYIAHL +L
Sbjct: 111 AANARERARMRVLSKAFSRLKTSLPWVPPDTKLSKLDTLRLASSYIAHLRQLL 163
>gi|4507741 twist [Homo sapiens]
Length = 202
Score = 76.6 bits (187), Expect = 1e-14
Identities = 48/93 (51%), Positives = 56/93 (60%), Gaps = 6/93 (6%)
Query: 36 QSFGCCEGPEAARRGPGPGGGRRAGGGGGAGPVVVVRQRQAANARERDRTQSVNTAFTAL 95
+S GC G G G GGG +GGG + QR AN RER RTQS+N AF AL
Sbjct: 77 KSAGCGGGG-----GAGGGGGSSSGGGSPQSYEELQTQRVMANVRERQRTQSLNEAFAAL 131
Query: 96 RTLIPTEPVDRKLSKIETLRLASSYIAHLANVL 128
R +IPT P D KLSKI+TL+LA+ YI L VL
Sbjct: 132 RKIIPTLPSD-KLSKIQTLKLAARYIDFLYQVL 163
>gi|4758506 basic helix-loop-helix transcription factor HAND1 [Homo
sapiens]
Length = 215
Score = 75.9 bits (185), Expect = 2e-14
Identities = 52/120 (43%), Positives = 66/120 (55%), Gaps = 16/120 (13%)
Query: 43 GPEAARRGPGPGGGRRAGGGGGAGPVVVVRQRQAANARERDRTQSVNTAFTALRTLIPTE 102
GP+A PG GR GG G R++ + +ER RT+S+N+AF LR IP
Sbjct: 73 GPDAR---PGQSPGRLEALGGRLG-----RRKGSGPKKERRRTESINSAFAELRECIPNV 124
Query: 103 PVDRKLSKIETLRLASSYIAHLANVLLLGDSADDGQPCFRAAGSAKGAVPAAADGGRQPR 162
P D KLSKI+TLRLA+SYIA+L +V L A G P A A ADGGR+ +
Sbjct: 125 PADTKLSKIKTLRLATSYIAYLMDV--LAKDAQSGDP------EAFKAELKKADGGRESK 176
>gi|38202237 transcription factor 21 [Homo sapiens]
Length = 179
Score = 72.4 bits (176), Expect = 2e-13
Identities = 45/114 (39%), Positives = 66/114 (57%), Gaps = 9/114 (7%)
Query: 21 LSEDEENRSESDASDQSFGCCEGPEAARRGPGPGGGRRAGGGGGAGPVVVVRQ------R 74
+ ++E + ++++++S C G RG G G+R P+ V Q R
Sbjct: 25 MDSNKEFVTSNESTEESSNCENGSPQKGRG---GLGKRRKAPTKKSPLSGVSQEGKQVQR 81
Query: 75 QAANARERDRTQSVNTAFTALRTLIPTEPVDRKLSKIETLRLASSYIAHLANVL 128
AANARER R + ++ AF+ L+T +P P D KLSK++TLRLASSYIAHL +L
Sbjct: 82 NAANARERARMRVLSKAFSRLKTTLPWVPPDTKLSKLDTLRLASSYIAHLRQIL 135
>gi|38202239 transcription factor 21 [Homo sapiens]
Length = 179
Score = 72.4 bits (176), Expect = 2e-13
Identities = 45/114 (39%), Positives = 66/114 (57%), Gaps = 9/114 (7%)
Query: 21 LSEDEENRSESDASDQSFGCCEGPEAARRGPGPGGGRRAGGGGGAGPVVVVRQ------R 74
+ ++E + ++++++S C G RG G G+R P+ V Q R
Sbjct: 25 MDSNKEFVTSNESTEESSNCENGSPQKGRG---GLGKRRKAPTKKSPLSGVSQEGKQVQR 81
Query: 75 QAANARERDRTQSVNTAFTALRTLIPTEPVDRKLSKIETLRLASSYIAHLANVL 128
AANARER R + ++ AF+ L+T +P P D KLSK++TLRLASSYIAHL +L
Sbjct: 82 NAANARERARMRVLSKAFSRLKTTLPWVPPDTKLSKLDTLRLASSYIAHLRQIL 135
>gi|29126247 basic helix-loop-helix family, member a15 [Homo
sapiens]
Length = 189
Score = 69.7 bits (169), Expect = 2e-12
Identities = 52/129 (40%), Positives = 63/129 (48%), Gaps = 14/129 (10%)
Query: 46 AARRGPGPGGGRRAGGGGGAGPV-VVVRQRQAANARERDRTQSVNTAFTALRTLIPTEPV 104
AA R PG G RR G G G +++R +N RER R +N AF ALR +IP
Sbjct: 48 AAARAPGEGRRRRPGPSGPGGRRDSSIQRRLESNERERQRMHKLNNAFQALREVIPHVRA 107
Query: 105 DRKLSKIETLRLASSYIAHL-ANVLLLGDSADDG------------QPCFRAAGSAKGAV 151
D+KLSKIETL LA +YI L A +L + S G Q + AG A GA
Sbjct: 108 DKKLSKIETLTLAKNYIKSLTATILTMSSSRLPGLEGPGPKLYQHYQQQQQVAGGALGAT 167
Query: 152 PAAADGGRQ 160
A G Q
Sbjct: 168 EAQPQGHLQ 176
>gi|21553337 atonal homolog 7 [Homo sapiens]
Length = 152
Score = 69.3 bits (168), Expect = 2e-12
Identities = 44/89 (49%), Positives = 53/89 (59%), Gaps = 3/89 (3%)
Query: 43 GPEAARRGPGP--GGGRRAGGGGGAGPVV-VVRQRQAANARERDRTQSVNTAFTALRTLI 99
GP A R P GG AG GAG + R+R AANARER R Q +NTAF LR ++
Sbjct: 8 GPPAGARVAPPCAGGTECAGTCAGAGRLESAARRRLAANARERRRMQGLNTAFDRLRRVV 67
Query: 100 PTEPVDRKLSKIETLRLASSYIAHLANVL 128
P D+KLSK ETL++A SYI L +L
Sbjct: 68 PQWGQDKKLSKYETLQMALSYIMALTRIL 96
>gi|4507363 T-cell acute lymphocytic leukemia 1 [Homo sapiens]
Length = 331
Score = 68.2 bits (165), Expect = 4e-12
Identities = 45/93 (48%), Positives = 53/93 (56%), Gaps = 5/93 (5%)
Query: 66 GPVVVVRQRQAANARERDRTQSVNTAFTALRTLIPTEPVDRKLSKIETLRLASSYIAHLA 125
GP V +R N+RER R Q+VN AF LR LIPT P D+KLSK E LRLA YI LA
Sbjct: 181 GPHTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLA 240
Query: 126 NVLLLGDSADDGQPCFRAAGSAKGAVPAAADGG 158
LL D ++G + A + K V A GG
Sbjct: 241 K--LLNDQEEEGT---QRAKTGKDPVVGAGGGG 268
Score = 27.7 bits (60), Expect = 6.7
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 42 EGPEAARRGPGPGGGRRAGGGGGAG 66
EG + A+ G P G GGGGG G
Sbjct: 249 EGTQRAKTGKDPVVGAGGGGGGGGG 273
Score = 27.3 bits (59), Expect = 8.8
Identities = 18/38 (47%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
Query: 45 EAARRGPGPGGGRRAGGGGGAGPVVVVRQRQAANARER 82
E RG GPGGG GGGGA + R A AR R
Sbjct: 53 ELGARG-GPGGG--PAGGGGAARDLKGRDAATAEARHR 87
>gi|17981708 twist homolog 2 [Homo sapiens]
Length = 160
Score = 65.9 bits (159), Expect = 2e-11
Identities = 40/78 (51%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 51 PGPGGGRRAGGGGGAGPVVVVRQRQAANARERDRTQSVNTAFTALRTLIPTEPVDRKLSK 110
P PG + G + QR AN RER RTQS+N AF ALR +IPT P D KLSK
Sbjct: 45 PTPGKRGKKGSPSAQSFEELQSQRILANVRERQRTQSLNEAFAALRKIIPTLPSD-KLSK 103
Query: 111 IETLRLASSYIAHLANVL 128
I+TL+LA+ YI L VL
Sbjct: 104 IQTLKLAARYIDFLYQVL 121
>gi|5031943 nescient helix loop helix 1 [Homo sapiens]
Length = 133
Score = 65.5 bits (158), Expect = 3e-11
Identities = 46/116 (39%), Positives = 60/116 (51%), Gaps = 17/116 (14%)
Query: 29 SESDASDQSFGCCEGPEAARRGPGPGGGRRAG---GGGGAGPV-------------VVVR 72
SE+++ G GP+ A G GPGGG+ G G G + +
Sbjct: 17 SETESGFSDCGGGAGPDGAGPG-GPGGGQARGPEPGEPGRKDLQHLSREERRRRRRATAK 75
Query: 73 QRQAANARERDRTQSVNTAFTALRTLIPTEPVDRKLSKIETLRLASSYIAHLANVL 128
R A RER R ++ N AF LR L+PT P D+KLSKIE LRLA YI++L +VL
Sbjct: 76 YRTAHATRERIRVEAFNLAFAELRKLLPTLPPDKKLSKIEILRLAICYISYLNHVL 131
>gi|34147558 lymphoblastic leukemia derived sequence 1 [Homo
sapiens]
Length = 280
Score = 64.7 bits (156), Expect = 5e-11
Identities = 48/109 (44%), Positives = 56/109 (51%), Gaps = 15/109 (13%)
Query: 71 VRQRQAANARERDRTQSVNTAFTALRTLIPTEPVDRKLSKIETLRLASSYIAHLANVLLL 130
V +R N+RER R Q+VN AF LR L+PT P DRKLSK E LRLA YI L V LL
Sbjct: 149 VARRVFTNSRERWRQQNVNGAFAELRKLLPTHPPDRKLSKNEVLRLAMKYIGFL--VRLL 206
Query: 131 GDSADDGQPCFRAAGSAKGAVPAAADGGRQPRSICTFCLSNQRKGGGRR 179
D +AA A G P G + R + R+G GRR
Sbjct: 207 RD---------QAAALAAGPTPP----GPRKRPVHRVPDDGARRGSGRR 242
>gi|239749439 PREDICTED: similar to transcription factor 23 [Homo
sapiens]
Length = 167
Score = 64.3 bits (155), Expect = 6e-11
Identities = 43/106 (40%), Positives = 56/106 (52%), Gaps = 18/106 (16%)
Query: 48 RRGPGP---GGGRRAGGGGGAGPVVVVRQRQAANARERDRTQSVNTAFTALRTLIPTEPV 104
R GPGP GGG R+G G R A ARER R Q++ AF L+ +P+ P
Sbjct: 31 RTGPGPAGPGGGSRSGSG---------RPAAANAARERSRVQTLRHAFLELQRTLPSVPP 81
Query: 105 DRKLSKIETLRLASSYIAHLANVLLLGDSADDGQ-PCFRAAGSAKG 149
D KLSK++ L LA++YIAHL L DD + P G+ +G
Sbjct: 82 DTKLSKLDVLLLATTYIAHLTRSL-----QDDAEAPADAGLGALRG 122
>gi|239743573 PREDICTED: similar to transcription factor 23 [Homo
sapiens]
Length = 167
Score = 64.3 bits (155), Expect = 6e-11
Identities = 43/106 (40%), Positives = 56/106 (52%), Gaps = 18/106 (16%)
Query: 48 RRGPGP---GGGRRAGGGGGAGPVVVVRQRQAANARERDRTQSVNTAFTALRTLIPTEPV 104
R GPGP GGG R+G G R A ARER R Q++ AF L+ +P+ P
Sbjct: 31 RTGPGPAGPGGGSRSGSG---------RPAAANAARERSRVQTLRHAFLELQRTLPSVPP 81
Query: 105 DRKLSKIETLRLASSYIAHLANVLLLGDSADDGQ-PCFRAAGSAKG 149
D KLSK++ L LA++YIAHL L DD + P G+ +G
Sbjct: 82 DTKLSKLDVLLLATTYIAHLTRSL-----QDDAEAPADAGLGALRG 122
>gi|68989258 neurogenin 3 [Homo sapiens]
Length = 214
Score = 63.5 bits (153), Expect = 1e-10
Identities = 40/98 (40%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 40 CCEGPEAARRG-PGPGGGRRAGGGGGAGPVVVVRQRQA----ANARERDRTQSVNTAFTA 94
C E E RG P RR G + + +QR++ AN RER+R ++N+A A
Sbjct: 46 CAEAEEGGCRGAPRKLRARRGGRSRPKSELALSKQRRSRRKKANDRERNRMHNLNSALDA 105
Query: 95 LRTLIPTEPVDRKLSKIETLRLASSYIAHLANVLLLGD 132
LR ++PT P D KL+KIETLR A +YI L L + D
Sbjct: 106 LRGVLPTFPDDAKLTKIETLRFAHNYIWALTQTLRIAD 143
>gi|30039710 pancreas specific transcription factor, 1a [Homo
sapiens]
Length = 328
Score = 63.2 bits (152), Expect = 1e-10
Identities = 31/55 (56%), Positives = 41/55 (74%)
Query: 74 RQAANARERDRTQSVNTAFTALRTLIPTEPVDRKLSKIETLRLASSYIAHLANVL 128
RQAAN RER R QS+N AF LR+ IPT P +++LSK++TLRLA YI L+ ++
Sbjct: 165 RQAANVRERRRMQSINDAFEGLRSHIPTLPYEKRLSKVDTLRLAIGYINFLSELV 219
>gi|31077092 neurogenin 2 [Homo sapiens]
Length = 272
Score = 63.2 bits (152), Expect = 1e-10
Identities = 60/187 (32%), Positives = 72/187 (38%), Gaps = 41/187 (21%)
Query: 22 SEDEENRSESDASDQSFGCCEGPEAARRGPGPGGGRRAGGGG------------------ 63
S DEE E AS G A G G GG AG G
Sbjct: 36 SADEEEEEEPGAS----GGARRQRGAEAGQGARGGVAAGAEGCRPARLLGLVHDCKRRPS 91
Query: 64 -------GAGPVVVVRQ-----RQAANARERDRTQSVNTAFTALRTLIPTEPVDRKLSKI 111
GA V++ R AN RER+R ++N A ALR ++PT P D KL+KI
Sbjct: 92 RARAVSRGAKTAETVQRIKKTRRLKANNRERNRMHNLNAALDALREVLPTFPEDAKLTKI 151
Query: 112 ETLRLASSYIAHLANVLLLGDSADDGQPCFRAA-------GSAKGAVPAAADGGRQPRSI 164
ETLR A +YI L L L D G A S GA A + G P
Sbjct: 152 ETLRFAHNYIWALTETLRLADHCGGGGGGLPGALFSEAVLLSPGGASAALSSSGDSPSPA 211
Query: 165 CTFCLSN 171
T+ +N
Sbjct: 212 STWSCTN 218
>gi|4885619 T-cell acute lymphocytic leukemia 2 [Homo sapiens]
Length = 108
Score = 61.6 bits (148), Expect = 4e-10
Identities = 33/51 (64%), Positives = 36/51 (70%)
Query: 78 NARERDRTQSVNTAFTALRTLIPTEPVDRKLSKIETLRLASSYIAHLANVL 128
N RER R Q+VN+AF LR LIPT P D+KLSK ETLRLA YI L VL
Sbjct: 8 NTRERWRQQNVNSAFAKLRKLIPTHPPDKKLSKNETLRLAMRYINFLVKVL 58
>gi|98986461 neurogenic differentiation 2 [Homo sapiens]
Length = 382
Score = 61.2 bits (147), Expect = 5e-10
Identities = 42/113 (37%), Positives = 57/113 (50%), Gaps = 10/113 (8%)
Query: 23 EDEENRSESDASDQSFGCCEGPEAARRGPGPGGGRRAGGGGGAGPVVVVRQRQAANARER 82
E+EE E + D++ EG +RGP +A +RQ ANARER
Sbjct: 82 EEEEEEEEEEGLDEA----EGERPKKRGPKKRKMTKARLERSK------LRRQKANARER 131
Query: 83 DRTQSVNTAFTALRTLIPTEPVDRKLSKIETLRLASSYIAHLANVLLLGDSAD 135
+R +N A LR ++P +KLSKIETLRLA +YI L+ +L G D
Sbjct: 132 NRMHDLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRSGKRPD 184
>gi|237757328 oligodendrocyte transcription factor 1 [Homo sapiens]
Length = 271
Score = 60.8 bits (146), Expect = 7e-10
Identities = 54/124 (43%), Positives = 60/124 (48%), Gaps = 22/124 (17%)
Query: 42 EGPEAARRGPGPGGGRRAGGGGGAGPVVVVRQ----RQAANARERDRTQSVNTAFTALRT 97
E PEA PGPG G A GG A P Q R+ N+RER R Q +N A ALR
Sbjct: 71 EKPEAPAEPPGPGPGSGAHPGGSARPDAKEEQQQQLRRKINSRERKRMQDLNLAMDALRE 130
Query: 98 LIPTEPV-------DRKLSKIETLRLASSYIAHLANVLLLGDSADDGQPCFRAAGSAKGA 150
+I RKLSKI TL LA +YI LLLG S Q RA G +GA
Sbjct: 131 VILPYSAAHCQGAPGRKLSKIATLLLARNYI------LLLGSSL---QELRRALG--EGA 179
Query: 151 VPAA 154
PAA
Sbjct: 180 GPAA 183
>gi|23097242 nephew of atonal 3 [Homo sapiens]
Length = 166
Score = 60.8 bits (146), Expect = 7e-10
Identities = 42/119 (35%), Positives = 59/119 (49%), Gaps = 4/119 (3%)
Query: 19 RLLSEDEENRSESDASDQSFGCCEGPEAARRGPGPGGGRRAGGGGGAGPVVVVRQRQAAN 78
R ++ EE E + + G E E RG G G V+ QRQAAN
Sbjct: 52 RRMARFEEGDPEEEECEVDQGDGEEEEEEERGRGVS----LLGRPKRKRVITYAQRQAAN 107
Query: 79 ARERDRTQSVNTAFTALRTLIPTEPVDRKLSKIETLRLASSYIAHLANVLLLGDSADDG 137
RER R ++N AF LR +PT +++LS+IETLRLA YI+ + +L + + G
Sbjct: 108 IRERKRMFNLNEAFDQLRRKVPTFAYEKRLSRIETLRLAIVYISFMTELLESCEKKESG 166
>gi|239754900 PREDICTED: similar to transcription factor 23 [Homo
sapiens]
Length = 167
Score = 59.3 bits (142), Expect = 2e-09
Identities = 42/105 (40%), Positives = 56/105 (53%), Gaps = 16/105 (15%)
Query: 48 RRGPGPGGGRRAGGGGGAGPVVVVRQRQAAN--ARERDRTQSVNTAFTALRTLIPTEPVD 105
R GPGP G GGG +G R AA ARER R Q++ AF ++ +P+ P D
Sbjct: 31 RTGPGPAG---LGGGSCSGS-----GRPAAENAARERSRVQTLRHAFLEVQRTLPSVPPD 82
Query: 106 RKLSKIETLRLASSYIAHLANVLLLGDSADDGQ-PCFRAAGSAKG 149
KLSK++ L LA++YIAHL L DD + P G+ +G
Sbjct: 83 TKLSKLDVLLLATTYIAHLTRSL-----QDDAEAPADAGLGALRG 122
>gi|38455396 neurogenin 1 [Homo sapiens]
Length = 237
Score = 58.9 bits (141), Expect = 3e-09
Identities = 32/65 (49%), Positives = 42/65 (64%)
Query: 73 QRQAANARERDRTQSVNTAFTALRTLIPTEPVDRKLSKIETLRLASSYIAHLANVLLLGD 132
+R AN RER+R ++N A ALR+++P+ P D KL+KIETLR A +YI LA L L D
Sbjct: 93 RRVKANDRERNRMHNLNAALDALRSVLPSFPDDTKLTKIETLRFAYNYIWALAETLRLAD 152
Query: 133 SADDG 137
G
Sbjct: 153 QGLPG 157
>gi|27475985 neurogenic differentiation 6 [Homo sapiens]
Length = 337
Score = 58.9 bits (141), Expect = 3e-09
Identities = 31/63 (49%), Positives = 41/63 (65%)
Query: 73 QRQAANARERDRTQSVNTAFTALRTLIPTEPVDRKLSKIETLRLASSYIAHLANVLLLGD 132
+RQ ANARER+R +N A LR ++P +KLSKIETLRLA +YI L+ +L +G
Sbjct: 95 RRQEANARERNRMHGLNDALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRIGK 154
Query: 133 SAD 135
D
Sbjct: 155 RPD 157
>gi|161484632 nescient helix loop helix 2 [Homo sapiens]
Length = 135
Score = 58.5 bits (140), Expect = 4e-09
Identities = 31/57 (54%), Positives = 39/57 (68%)
Query: 72 RQRQAANARERDRTQSVNTAFTALRTLIPTEPVDRKLSKIETLRLASSYIAHLANVL 128
+ R A RER R ++ N AF LR L+PT P D+KLSKIE LRLA YI++L +VL
Sbjct: 77 KYRSAHATRERIRVEAFNLAFAELRKLLPTLPPDKKLSKIEILRLAICYISYLNHVL 133
>gi|5031945 nescient helix loop helix 2 [Homo sapiens]
Length = 135
Score = 58.5 bits (140), Expect = 4e-09
Identities = 31/57 (54%), Positives = 39/57 (68%)
Query: 72 RQRQAANARERDRTQSVNTAFTALRTLIPTEPVDRKLSKIETLRLASSYIAHLANVL 128
+ R A RER R ++ N AF LR L+PT P D+KLSKIE LRLA YI++L +VL
Sbjct: 77 KYRSAHATRERIRVEAFNLAFAELRKLLPTLPPDKKLSKIEILRLAICYISYLNHVL 133
>gi|121114306 neurogenic differentiation 1 [Homo sapiens]
Length = 356
Score = 57.8 bits (138), Expect = 6e-09
Identities = 31/63 (49%), Positives = 40/63 (63%)
Query: 73 QRQAANARERDRTQSVNTAFTALRTLIPTEPVDRKLSKIETLRLASSYIAHLANVLLLGD 132
+R ANARER+R +N A LR ++P +KLSKIETLRLA +YI L+ +L G
Sbjct: 102 RRMKANARERNRMHGLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRSGK 161
Query: 133 SAD 135
S D
Sbjct: 162 SPD 164
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.136 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,727,572
Number of Sequences: 37866
Number of extensions: 451431
Number of successful extensions: 6409
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 203
Number of HSP's successfully gapped in prelim test: 141
Number of HSP's that attempted gapping in prelim test: 4660
Number of HSP's gapped (non-prelim): 1259
length of query: 199
length of database: 18,247,518
effective HSP length: 97
effective length of query: 102
effective length of database: 14,574,516
effective search space: 1486600632
effective search space used: 1486600632
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.