FERD3L 15756

Name: FERD3L	Sequence: fasta or formatted (166aa)		NCBI GI: 23097242
Description: nephew of atonal 3		Referenced in: Helix-Loop-Helix Transcription Factors
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.4 14 2 C cysteine 2.4 4 1 D aspartate 5.4 9 1 E glutamate 14.5 24 7 F phenylalanine 4.2 7 1 G glycine 6.0 10 1 H histidine 0.0 0 0 I isoleucine 3.0 5 1 K lysine 4.2 7 2 L leucine 10.2 17 2 M methionine 2.4 4 1 N asparagine 1.8 3 1 P proline 5.4 9 1 Q glutamine 2.4 4 1 R arginine 12.7 21 2 S serine 5.4 9 1 T threonine 3.6 6 2 V valine 5.4 9 1 W tryptophan 0.0 0 0 Y tyrosine 2.4 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 nephew of atonal 3 PTF1A 0.177 pancreas specific transcription factor, 1a NEUROD2 0.177 neurogenic differentiation 2 NEUROD4 0.151 neurogenic differentiation 4 NEUROD6 0.148 neurogenic differentiation 6 NEUROD1 0.148 neurogenic differentiation 1 ATOH1 0.144 atonal homolog 1 ATOH7 0.128 atonal homolog 7 NEUROG1 0.118 neurogenin 1 TCF15 0.118 basic helix-loop-helix transcription factor 15 [Homo... BHLHA9 0.108 PREDICTED: basic helix-loop-helix family, member a9... BHLHA9 0.108 PREDICTED: basic helix-loop-helix family, member a9... BHLHA9 0.108 PREDICTED: basic helix-loop-helix family, member a9... NEUROG2 0.108 neurogenin 2 TWIST1 0.108 twist TWIST2 0.108 twist homolog 2 NEUROG3 0.108 neurogenin 3 MSC 0.105 musculin NHLH2 0.102 nescient helix loop helix 2 NHLH2 0.102 nescient helix loop helix 2 NHLH1 0.098 nescient helix loop helix 1 SCXB 0.098 scleraxis homolog B SCXA 0.098 scleraxis homolog A TAL2 0.098 T-cell acute lymphocytic leukemia 2 TAL1 0.095 T-cell acute lymphocytic leukemia 1 ASCL5 0.092 PREDICTED: achaete-scute complex homolog 5 (Drosoph... ASCL5 0.092 PREDICTED: achaete-scute complex homolog 5 (Drosoph... ASCL5 0.092 PREDICTED: achaete-scute complex homolog 5 BHLHE23 0.092 basic helix-loop-helix domain containing, class B, 4... TCF21 0.089 transcription factor 21 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.