Guide to the Human Genome
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Name: TAL2 Sequence: fasta or formatted (108aa) NCBI GI: 4885619
Description:

T-cell acute lymphocytic leukemia 2

Referenced in:

T cells
Helix-Loop-Helix Transcription Factors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.6          5           2
 C cysteine            0.0          0           0
 D aspartate           1.9          2           1
 E glutamate           4.6          5           1
 F phenylalanine       3.7          4           1
 G glycine             6.5          7           1
 H histidine           3.7          4           2
 I isoleucine          4.6          5           1
 K lysine              6.5          7           2
 L leucine            13.0         14           2
 M methionine          1.9          2           1
 N asparagine          6.5          7           1
 P proline             9.3         10           2
 Q glutamine           7.4          8           2
 R arginine            7.4          8           1
 S serine              4.6          5           1
 T threonine           6.5          7           1
 V valine              4.6          5           1
 W tryptophan          0.9          1           1
 Y tyrosine            1.9          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   T-cell acute lymphocytic leukemia 2 
TAL1                  0.419   T-cell acute lymphocytic leukemia 1 
LYL1                  0.389   lymphoblastic leukemia derived sequence 1 
TWIST1                0.212   twist 
TWIST2                0.202   twist homolog 2 
NHLH2                 0.187   nescient helix loop helix 2 
NHLH2                 0.187   nescient helix loop helix 2 
NHLH1                 0.187   nescient helix loop helix 1 
TCF15                 0.187   basic helix-loop-helix transcription factor 15 [Homo...
SCXB                  0.177   scleraxis homolog B 
PTF1A                 0.177   pancreas specific transcription factor, 1a 
SCXA                  0.177   scleraxis homolog A 
ATOH7                 0.177   atonal homolog 7 
HAND2                 0.167   basic helix-loop-helix transcription factor HAND2 [H...
HAND1                 0.157   basic helix-loop-helix transcription factor HAND1 [Ho...
NEUROG2               0.152   neurogenin 2 
ATOH1                 0.152   atonal homolog 1 
FERD3L                0.152   nephew of atonal 3 
NEUROG3               0.146   neurogenin 3 
NEUROG1               0.141   neurogenin 1 
BHLHA15               0.131   basic helix-loop-helix family, member a15 
TCF21                 0.126   transcription factor 21 
TCF21                 0.126   transcription factor 21 
ASCL5                 0.126   PREDICTED: achaete-scute complex homolog 5 (Drosoph...
ASCL5                 0.126   PREDICTED: achaete-scute complex homolog 5 (Drosoph...
ASCL5                 0.126   PREDICTED: achaete-scute complex homolog 5 
NEUROD1               0.126   neurogenic differentiation 1 
NEUROD4               0.126   neurogenic differentiation 4 
MSC                   0.126   musculin 
ASCL4                 0.121   achaete-scute complex-like 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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