| Name: HAND1 | Sequence: fasta or formatted (215aa) | NCBI GI: 4758506 | |
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Description: basic helix-loop-helix transcription factor HAND1
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Referenced in: Helix-Loop-Helix Transcription Factors
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 13.0 28 6 C cysteine 0.9 2 1 D aspartate 3.7 8 1 E glutamate 6.5 14 1 F phenylalanine 3.3 7 1 G glycine 8.8 19 2 H histidine 5.6 12 7 I isoleucine 2.3 5 1 K lysine 6.5 14 2 L leucine 8.8 19 2 M methionine 1.4 3 1 N asparagine 1.9 4 1 P proline 10.7 23 3 Q glutamine 4.2 9 2 R arginine 7.9 17 3 S serine 5.6 12 1 T threonine 2.8 6 1 V valine 2.3 5 1 W tryptophan 1.4 3 1 Y tyrosine 2.3 5 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 basic helix-loop-helix transcription factor HAND1 [Ho... HAND2 0.407 basic helix-loop-helix transcription factor HAND2 [H... TCF15 0.119 basic helix-loop-helix transcription factor 15 [Homo... SCXB 0.110 scleraxis homolog B SCXA 0.110 scleraxis homolog A LOC100129654 0.105 PREDICTED: similar to transcription factor 23 [Homo... LOC100129654 0.105 PREDICTED: similar to transcription factor 23 [Homo... LOC100129654 0.101 PREDICTED: similar to transcription factor 23 [Homo... BHLHA15 0.094 basic helix-loop-helix family, member a15 NHLH1 0.089 nescient helix loop helix 1 TWIST1 0.082 twist TWIST2 0.080 twist homolog 2 TCF21 0.080 transcription factor 21 TCF21 0.080 transcription factor 21 ATOH7 0.080 atonal homolog 7 NHLH2 0.077 nescient helix loop helix 2 NHLH2 0.077 nescient helix loop helix 2 PTF1A 0.075 pancreas specific transcription factor, 1a MSC 0.075 musculin TAL2 0.073 T-cell acute lymphocytic leukemia 2 TAL1 0.070 T-cell acute lymphocytic leukemia 1 LYL1 0.066 lymphoblastic leukemia derived sequence 1 MESP1 0.066 mesoderm posterior 1 FIGLA 0.063 factor in the germline alpha TCF23 0.063 transcription factor 23 NEUROG1 0.063 neurogenin 1 MESP2 0.063 mesoderm posterior 2 homolog ASCL4 0.061 achaete-scute complex-like 4 ASCL5 0.061 PREDICTED: achaete-scute complex homolog 5 (Drosoph... ASCL5 0.061 PREDICTED: achaete-scute complex homolog 5 (Drosoph...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
