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Search of human proteins with 47716512
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|47716512 mex-3 homolog B [Homo sapiens]
(569 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|47716512 mex-3 homolog B [Homo sapiens] 1151 0.0
gi|148229134 ring finger and KH domain containing 2 [Homo sapiens] 506 e-143
gi|165905613 ring finger and KH domain containing 1 [Homo sapiens] 449 e-126
gi|147902746 MEX3A protein [Homo sapiens] 390 e-108
gi|154355000 KH-type splicing regulatory protein [Homo sapiens] 54 4e-07
gi|38683807 ankyrin repeat domain protein 17 isoform a [Homo sap... 53 9e-07
gi|38683816 ankyrin repeat domain protein 17 isoform b [Homo sap... 53 9e-07
gi|32528299 baculoviral IAP repeat-containing protein 4 [Homo sa... 52 1e-06
gi|17402900 far upstream element-binding protein [Homo sapiens] 52 1e-06
gi|161016767 mucin 21 [Homo sapiens] 50 4e-06
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 50 4e-06
gi|217416388 neuralized homolog 1B [Homo sapiens] 50 7e-06
gi|4502141 baculoviral IAP repeat-containing protein 2 [Homo sap... 49 9e-06
gi|33946285 baculoviral IAP repeat-containing protein 3 [Homo sa... 49 2e-05
gi|4502139 baculoviral IAP repeat-containing protein 3 [Homo sap... 49 2e-05
gi|28559039 mediator complex subunit 1 [Homo sapiens] 48 2e-05
gi|169173184 PREDICTED: hypothetical protein [Homo sapiens] 47 5e-05
gi|111120318 NK6 transcription factor related, locus 1 [Homo sap... 47 5e-05
gi|18375613 dachshund homolog 1 isoform b [Homo sapiens] 47 6e-05
gi|18375611 dachshund homolog 1 isoform a [Homo sapiens] 47 6e-05
gi|18375609 dachshund homolog 1 isoform c [Homo sapiens] 47 6e-05
gi|23397642 GREB1 protein isoform a [Homo sapiens] 47 6e-05
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] 47 6e-05
gi|38788243 myosin regulatory light chain interacting protein [H... 47 6e-05
gi|223278368 neuralized-like [Homo sapiens] 46 8e-05
gi|28872796 CCAAT/enhancer binding protein beta [Homo sapiens] 46 8e-05
gi|57864582 hornerin [Homo sapiens] 46 8e-05
gi|21359963 ring finger and WD repeat domain 2 isoform a [Homo s... 46 8e-05
gi|50233824 ring finger and WD repeat domain 2 isoform d24 [Homo... 46 8e-05
gi|55953110 retinoblastoma protein-binding zinc finger protein i... 46 1e-04
>gi|47716512 mex-3 homolog B [Homo sapiens]
Length = 569
Score = 1151 bits (2978), Expect = 0.0
Identities = 569/569 (100%), Positives = 569/569 (100%)
Query: 1 MPSSLFADLERNGSGGGGGGSSGGGETLDDQRALQLALDQLSLLGLDSDEGASLYDSEPR 60
MPSSLFADLERNGSGGGGGGSSGGGETLDDQRALQLALDQLSLLGLDSDEGASLYDSEPR
Sbjct: 1 MPSSLFADLERNGSGGGGGGSSGGGETLDDQRALQLALDQLSLLGLDSDEGASLYDSEPR 60
Query: 61 KKSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRKEDV 120
KKSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRKEDV
Sbjct: 61 KKSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRKEDV 120
Query: 121 AMARREIISAAEHFSMIRASRNKNTALNGAVPGPPNLPGQTTIQVRVPYRVVGLVVGPKG 180
AMARREIISAAEHFSMIRASRNKNTALNGAVPGPPNLPGQTTIQVRVPYRVVGLVVGPKG
Sbjct: 121 AMARREIISAAEHFSMIRASRNKNTALNGAVPGPPNLPGQTTIQVRVPYRVVGLVVGPKG 180
Query: 181 ATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRAREEIEAHIALRTGGIIELTDEND 240
ATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRAREEIEAHIALRTGGIIELTDEND
Sbjct: 181 ATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRAREEIEAHIALRTGGIIELTDEND 240
Query: 241 FHANGTDVGFDLHHGSGGSGPGSLWSKPTPSITPTPGRKPFSSYRNDSSSSLGSASTDSY 300
FHANGTDVGFDLHHGSGGSGPGSLWSKPTPSITPTPGRKPFSSYRNDSSSSLGSASTDSY
Sbjct: 241 FHANGTDVGFDLHHGSGGSGPGSLWSKPTPSITPTPGRKPFSSYRNDSSSSLGSASTDSY 300
Query: 301 FGGGTSSSAAATQRLADYSPPSPALSFAHNGNNNNNGNGYTYTAGGEASVPSPDGCPELQ 360
FGGGTSSSAAATQRLADYSPPSPALSFAHNGNNNNNGNGYTYTAGGEASVPSPDGCPELQ
Sbjct: 301 FGGGTSSSAAATQRLADYSPPSPALSFAHNGNNNNNGNGYTYTAGGEASVPSPDGCPELQ 360
Query: 361 PTFDPAPAPPPGAPLIWAQFERSPGGGPAAPVSSSCSSSASSSASSSSVVFPGGGASAPS 420
PTFDPAPAPPPGAPLIWAQFERSPGGGPAAPVSSSCSSSASSSASSSSVVFPGGGASAPS
Sbjct: 361 PTFDPAPAPPPGAPLIWAQFERSPGGGPAAPVSSSCSSSASSSASSSSVVFPGGGASAPS 420
Query: 421 NANLGLLVHRRLHPGTSCPRLSPPLHMAPGAGEHHLARRVRSDPGGGGLAYAAYANGLGA 480
NANLGLLVHRRLHPGTSCPRLSPPLHMAPGAGEHHLARRVRSDPGGGGLAYAAYANGLGA
Sbjct: 421 NANLGLLVHRRLHPGTSCPRLSPPLHMAPGAGEHHLARRVRSDPGGGGLAYAAYANGLGA 480
Query: 481 QLPGLQPSDTSGSSSSSSSSSSSSSSSSGLRRKGSRDCSVCFESEVIAALVPCGHNLFCM 540
QLPGLQPSDTSGSSSSSSSSSSSSSSSSGLRRKGSRDCSVCFESEVIAALVPCGHNLFCM
Sbjct: 481 QLPGLQPSDTSGSSSSSSSSSSSSSSSSGLRRKGSRDCSVCFESEVIAALVPCGHNLFCM 540
Query: 541 ECANRICEKSEPECPVCHTAVTQAIRIFS 569
ECANRICEKSEPECPVCHTAVTQAIRIFS
Sbjct: 541 ECANRICEKSEPECPVCHTAVTQAIRIFS 569
>gi|148229134 ring finger and KH domain containing 2 [Homo sapiens]
Length = 659
Score = 506 bits (1303), Expect = e-143
Identities = 301/510 (59%), Positives = 333/510 (65%), Gaps = 76/510 (14%)
Query: 60 RKKSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRKED 119
R+KSVN TECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEP+FVVTGRKED
Sbjct: 226 RRKSVNTTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPIFVVTGRKED 285
Query: 120 VAMARREIISAAEHFSMIRASRNKNTALNGAVPGPPNLPGQTTIQVRVPYRVVGLVVGPK 179
VAMA+REI+SAAEHFSMIRASRNKN G + PNLPGQTT+QVRVPYRVVGLVVGPK
Sbjct: 286 VAMAKREILSAAEHFSMIRASRNKNGPALGGLSCSPNLPGQTTVQVRVPYRVVGLVVGPK 345
Query: 180 GATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRAREEIEAHIALRTGGIIELTDEN 239
GATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRAREEIE HIA+RTG IEL +EN
Sbjct: 346 GATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRAREEIEMHIAMRTGNYIELNEEN 405
Query: 240 DFHANGTDVGFDLHHGSGGSGPGSLWSKPTPSITPTPGRKPFSSYRNDSSSSLGSASTDS 299
DFH NGTDV F+ G GS W P P + S+YRNDSSSSLGS STDS
Sbjct: 406 DFHYNGTDVSFE------GGTLGSAWLSSNP--VPPSRARMISNYRNDSSSSLGSGSTDS 457
Query: 300 YFGGGTSSSAAATQRLADYSPPSPALSFAHNGNNNNNGNGYTYTAGGEASVPSPDGCPEL 359
YFG + RLAD+SP SP G + SV S D +
Sbjct: 458 YFG---------SNRLADFSPTSPF------------STGNFWFGDTLPSVGSEDLAVD- 495
Query: 360 QPTFDPAPAPPPGAPLIWAQFERSPGGGPAAPVSSSCSSSASSSASSSSVVFPGGGASAP 419
P FD P A IW FE P P+S G S P
Sbjct: 496 SPAFDSLPT---SAQTIWTPFE------PVNPLS--------------------GFGSDP 526
Query: 420 SNANLGLLVHRRLHPGTSCPRLSPPLHMAPGAGEHHLARRVRSDPGGGGLAYAAYANGLG 479
S G + +R S PRLSP P + EH LARRVRSDP G N +G
Sbjct: 527 S----GNMKTQRRGSQPSTPRLSPTF---PESIEHPLARRVRSDPPSTG-------NHVG 572
Query: 480 AQLPGLQPSDTSGSSSSSSSSSSSSSSSSGLRRKGSRDCSVCFESEVIAALVPCGHNLFC 539
LP P+ ++G++S SSS+ S+SSS R+ DC +CFE+EVIAALVPCGHNLFC
Sbjct: 573 --LPIYIPAFSNGTNSYSSSNGGSTSSSPPESRR-KHDCVICFENEVIAALVPCGHNLFC 629
Query: 540 MECANRICEKSEPECPVCHTAVTQAIRIFS 569
MECAN+ICEK P CPVC TAVTQAI+I S
Sbjct: 630 MECANKICEKRTPSCPVCQTAVTQAIQIHS 659
>gi|165905613 ring finger and KH domain containing 1 [Homo sapiens]
Length = 651
Score = 449 bits (1154), Expect = e-126
Identities = 281/556 (50%), Positives = 323/556 (58%), Gaps = 88/556 (15%)
Query: 36 LALDQLSLLGLDSDEGASLYDSEPRKKSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAK 95
L DQ+S++G RKKSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAK
Sbjct: 162 LLADQMSVIG-------------SRKKSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAK 208
Query: 96 TNTYIKTPVRGEEPVFVVTGRKEDVAMARREIISAAEHFSMIRASRNKNTALNGAVPGPP 155
TNTYIKTPVRGEEPVF+VTGRKEDV MA+REI+SAAEHFS+IRA+R+K L GA GPP
Sbjct: 209 TNTYIKTPVRGEEPVFIVTGRKEDVEMAKREILSAAEHFSIIRATRSKAGGLPGAAQGPP 268
Query: 156 NLPGQTTIQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVD 215
NLPGQTTIQVRVPYRVVGLVVGPKGATIKRIQQ+THTYIVTP RDKEPVF VTGMPENVD
Sbjct: 269 NLPGQTTIQVRVPYRVVGLVVGPKGATIKRIQQRTHTYIVTPGRDKEPVFAVTGMPENVD 328
Query: 216 RAREEIEAHIALRTGGIIELTDENDFHANGTDVGFDLHHGSGGSGPGSLWSKPTPSITPT 275
RAREEIEAHI LRTG + ++DFHANGTDV DL SLW+K TP
Sbjct: 329 RAREEIEAHITLRTGAFTDAGPDSDFHANGTDVCLDLL-----GAAASLWAK-----TPN 378
Query: 276 PGRKP---FSSYRNDSSSSLGSASTDSYFGGGTSSSAAATQRLADYSPPSPALSFAHNGN 332
GR+P + R D ++LG+ S F G+ + P PA ++ +GN
Sbjct: 379 QGRRPPTATAGLRGD--TALGAPSAPEAFYAGSRGGPSVPD-------PGPASPYSGSGN 429
Query: 333 NNNNGNGYTYTA---GGEASVPSPDGCP-ELQPTFDPAPAPPPGAPLIWAQFERSPGGGP 388
G+ + A G +PD C F P A IWA FER+
Sbjct: 430 -----GGFAFGAEGPGAPVGTAAPDDCDFGFDFDFLALDLTVPAAATIWAPFERA----A 480
Query: 389 AAPVSSSCSSSASSSASSSSVVFPGGGASAPSNANLGLLVHRRLHPGTSCPRLSPPLHMA 448
P S CS+ GA P A R G PR SP L
Sbjct: 481 PLPAFSGCSTV--------------NGAPGPPAAG------ARRSSGAGTPRHSPTLPEP 520
Query: 449 PGAG-EHHLARRVRSDPGG--------------GGLAYAAYANGLGAQLPGLQPSDTSGS 493
G E L+RR DP G GG A++ A L + +
Sbjct: 521 GGLRLELPLSRRGAPDPVGALSWRPPQGPVSFPGGAAFST-ATSLPSSPAAAACAPLDSG 579
Query: 494 SSSSSSSSSSSSSSSGLRRKGSRDCSVCFESEVIAALVPCGHNLFCMECANRICEKSEPE 553
+S +S S+SS+ L +R+C VC E EV+AALVPCGHNLFCM+CA RIC KSEPE
Sbjct: 580 ASENSRKPPSASSAPAL----ARECVVCAEGEVMAALVPCGHNLFCMDCAVRICGKSEPE 635
Query: 554 CPVCHTAVTQAIRIFS 569
CP C T TQAI IFS
Sbjct: 636 CPACRTPATQAIHIFS 651
Score = 66.2 bits (160), Expect = 7e-11
Identities = 75/256 (29%), Positives = 99/256 (38%), Gaps = 51/256 (19%)
Query: 1 MPSSLFADLERNGSGGGGGGSSGGGETL-------------------------DDQRALQ 35
MPSSL G GGGGGG GE D AL+
Sbjct: 1 MPSSLGQPDGGGGGGGGGGGVGAAGEDPGPGPAPPPEGAQEAAPAPRPPPEPDDAAAALR 60
Query: 36 LALDQLSLLGL----DSDEGASLYDSEPRKKSVN---MTECVPVPSSEHVAEIVGRQGC- 87
LALDQLS LGL D+DE + D + E VP E A
Sbjct: 61 LALDQLSALGLGGAGDTDEEGAAGDGAAAAGGADGGAAPEPVPPDGPEAGAPPTLAPAVA 120
Query: 88 --KIKALRAKTNTYIKTPVRGEEPVFVVTGRKEDVAMARREIISAAEHFSMIRASRNKNT 145
+ L + P R P A+ ++ A+ S+I SR K+
Sbjct: 121 PGSLPLLDPNASPPPPPPPRPSPPDVFAGFAPHPAALGPPTLL--ADQMSVI-GSRKKSV 177
Query: 146 ALNGAVPGPPNLPGQTTIQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSRDKEPVF 205
+ VP P + V +VG +G IK ++ +T+TYI TP R +EPVF
Sbjct: 178 NMTECVPVPSS-------------EHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVF 224
Query: 206 EVTGMPENVDRAREEI 221
VTG E+V+ A+ EI
Sbjct: 225 IVTGRKEDVEMAKREI 240
Score = 31.6 bits (70), Expect = 2.0
Identities = 40/136 (29%), Positives = 48/136 (35%), Gaps = 21/136 (15%)
Query: 330 NGNNNNNGNGYTYTAGGEASVPSPDGCPELQPTFDPAPAPPP-----GAPLIWAQFERSP 384
+G G G A GE P P PE PAP PPP A L A + S
Sbjct: 9 DGGGGGGGGGGGVGAAGEDPGPGPAPPPEGAQEAAPAPRPPPEPDDAAAALRLALDQLSA 68
Query: 385 ----GGGP-----AAPVSSSCSSSASSSASSSSVVFPGGGASAP-------SNANLGLLV 428
G G AA ++ + A A+ V G A AP + +L LL
Sbjct: 69 LGLGGAGDTDEEGAAGDGAAAAGGADGGAAPEPVPPDGPEAGAPPTLAPAVAPGSLPLLD 128
Query: 429 HRRLHPGTSCPRLSPP 444
P PR SPP
Sbjct: 129 PNASPPPPPPPRPSPP 144
>gi|147902746 MEX3A protein [Homo sapiens]
Length = 520
Score = 390 bits (1001), Expect = e-108
Identities = 248/509 (48%), Positives = 282/509 (55%), Gaps = 115/509 (22%)
Query: 61 KKSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRKEDV 120
K S N TECVPVP+SEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVF+VTGR+EDV
Sbjct: 127 KGSSNTTECVPVPTSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFMVTGRREDV 186
Query: 121 AMARREIISAAEHFSMIRASRNKNTALNGAVPGPPNLPGQTTIQVRVPYRVVGLVVGPKG 180
A ARREIISAAEHFSMIRASRNK+ A G P LPGQ TI+VRVPYRVVGLVVGPKG
Sbjct: 187 ATARREIISAAEHFSMIRASRNKSGAAFGVAPA---LPGQVTIRVRVPYRVVGLVVGPKG 243
Query: 181 ATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRAREEIEAHIALRTGGIIELTDEND 240
ATIKRIQQQT+TYI+TPSRD++PVFE+TG P NV+RAREEIE HIA+RTG I+E +END
Sbjct: 244 ATIKRIQQQTNTYIITPSRDRDPVFEITGAPGNVERAREEIETHIAVRTGKILEYNNEND 303
Query: 241 FHANGTDVGFDLHHGSGGSGPGSLWSKPTPSITPTPGRKPFSSYRNDSSSSLGSASTDSY 300
F A D D + W PG KP S++R +S +G DS
Sbjct: 304 FLAGSPDAAIDSRYSDA-------WR------VHQPGCKPLSTFRQNSLGCIGECGVDSG 350
Query: 301 FGGGTSSSAAATQRLADYSPPSPALSFAHNGNNNNNGNGYTYTAGGEASVPSPDGCPELQ 360
F A G + G GY + G G E
Sbjct: 351 F---------------------EAPRLGEQGGDFGYG-GYLFPGYGVGKQDVYYGVAETS 388
Query: 361 PTFDPAPAPPPGAPLIWAQFERSPGGGPAAPVSSSCSSSASSSASSSSVVFPGGGASAPS 420
P +WA E + P + + SS SSS+SSSA + + PG S +
Sbjct: 389 PP-------------LWAGQENAT---PTSVLFSSASSSSSSSAKARAGP-PGAHRSPAT 431
Query: 421 NANLGLLVHRRLHPGTSCPRLSPPLHMAPGAGEHHLARRVRSDPGGGGLAYAAYANGLGA 480
+A L R PG P G L GGGGL
Sbjct: 432 SAGPELAGLPRRPPG------------EPLQGFSKL--------GGGGL----------- 460
Query: 481 QLPGLQPSDTSGSSSSSSSSSSSSSSSSGLRRKGSRDCSVCFESEVIAALVPCGHNLFCM 540
+ PG G RDC VCFESEV AALVPCGHNLFCM
Sbjct: 461 RSPG-----------------------------GGRDCMVCFESEVTAALVPCGHNLFCM 491
Query: 541 ECANRICEKSEPECPVCHTAVTQAIRIFS 569
ECA RICE+++PECPVCH TQAIRIFS
Sbjct: 492 ECAVRICERTDPECPVCHITATQAIRIFS 520
>gi|154355000 KH-type splicing regulatory protein [Homo sapiens]
Length = 711
Score = 53.9 bits (128), Expect = 4e-07
Identities = 88/385 (22%), Positives = 128/385 (33%), Gaps = 79/385 (20%)
Query: 70 VPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPV---RGEEPVFVVTGRKEDVAMARRE 126
VPVP V ++GR G IK ++ I+ G E + + G + A R
Sbjct: 327 VPVPRHS-VGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHAARI 385
Query: 127 IISAAEHFSMIRASRNKNTALNGAVPGPPNLPGQTT------------------IQVRVP 168
I + +L PGPP PG + +P
Sbjct: 386 INDLLQ-------------SLRSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSIP 432
Query: 169 YRVVGLVVGPKGATIKRIQQQTHTYI-----VTPSRDKE-PVFEVTGMPENVDRAREEIE 222
GLV+G G +K I QQT ++ + P+ D +F + G P+ +D A++ IE
Sbjct: 433 THKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIE 492
Query: 223 AHIALRTGGIIELTDENDFHANGTDVGFDLHHGSGGSGPGSLWSKPTPSITP-TPGRKPF 281
I G + + G G GPG P + P PG PF
Sbjct: 493 EKI---EGPLCPV-------------------GPGPGGPG-----PAGPMGPFNPG--PF 523
Query: 282 SSYRNDSSSSLGSASTDSYFGGGTSSSAAATQRLADYSPPSPALSFAHNGNNNNNGNGYT 341
+ + G Y G ++ Q A + PS A + A + N
Sbjct: 524 NQGPPGAPPHAGGPPPHQYPPQGWGNTYPQWQPPAPHD-PSKAAAAAADPNAAWAAYYSH 582
Query: 342 YTAGGEASVPSPDGCPELQPTFDPAPAPPPGA----PLIWAQFERSPG---GGPAAPVSS 394
Y VP P P P P PPP W ++ + G P AP
Sbjct: 583 YYQQPPGPVPGPAPAPAAPPAQGEPPQPPPTGQSDYTKAWEEYYKKIGQQPQQPGAPPQQ 642
Query: 395 SCSSSASSSASSSSVVFPGGGASAP 419
+ + + V GGG AP
Sbjct: 643 DYTKAWEEYYKKQAQVATGGGPGAP 667
Score = 40.0 bits (92), Expect = 0.006
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 5/84 (5%)
Query: 153 GPPNLPGQTTI--QVRVPYRVVGLVVGPKGATIKRIQQQTHTYI-VTPSRDKEPVFEV-- 207
GP + P +T++ + RVP +VGL++G G I +IQQ + + ++P P V
Sbjct: 135 GPIHPPPRTSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSL 194
Query: 208 TGMPENVDRAREEIEAHIALRTGG 231
TG PE+V +A+ ++ ++ GG
Sbjct: 195 TGAPESVQKAKMMLDDIVSRGRGG 218
Score = 36.6 bits (83), Expect = 0.064
Identities = 49/201 (24%), Positives = 82/201 (40%), Gaps = 24/201 (11%)
Query: 65 NMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIK-TPVRGEEPVFVV--TGRKEDVA 121
+MTE VP V I+GR G +I ++ + ++ +P G P V TG E V
Sbjct: 144 SMTEEYRVPDGM-VGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQ 202
Query: 122 MARR---EIISAAEHFSMIRASRNKNTALNGAVPGPPNLPGQTTIQVRVPYRVVGLVVGP 178
A+ +I+S + N N NG V ++ +P GLV+G
Sbjct: 203 KAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQ-----------EIMIPAGKAGLVIGK 251
Query: 179 KGATIKRIQQQTHTYIV-----TPSRDKEPVFEVTGMPENVDRAREEIEAHIALR-TGGI 232
G TIK++Q++ ++ + + + + + G P V +A E + + R GG
Sbjct: 252 GGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRERDQGGF 311
Query: 233 IELTDENDFHANGTDVGFDLH 253
+ + G DV H
Sbjct: 312 GDRNEYGSRIGGGIDVPVPRH 332
Score = 31.6 bits (70), Expect = 2.0
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Query: 163 IQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSRD---KEPVFEVTGMPENVDRARE 219
I V VP VG+V+G G IK+IQ I D E + + G P+ + A
Sbjct: 325 IDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHAAR 384
Query: 220 EIEAHI-ALRTG 230
I + +LR+G
Sbjct: 385 IINDLLQSLRSG 396
>gi|38683807 ankyrin repeat domain protein 17 isoform a [Homo sapiens]
Length = 2603
Score = 52.8 bits (125), Expect = 9e-07
Identities = 100/413 (24%), Positives = 159/413 (38%), Gaps = 68/413 (16%)
Query: 61 KKSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYI---KTPVRGEEPVFVVTGRK 117
K+ V ++ V VPS+ ++ ++GR GC I A+R T +I K + + + + G
Sbjct: 1721 KEVVRRSKKVSVPSTV-ISRVIGRGGCNINAIREFTGAHIDIDKQKDKTGDRIITIRGGT 1779
Query: 118 EDVAMARREIISA------AEHFSMIRASRNKNTALNGAV-PGPPNLPGQTTIQVRVPYR 170
E A ++I+A E +I +R K+++ N + P T + +
Sbjct: 1780 ESTRQA-TQLINALIKDPDKEIDELIPKNRLKSSSANSKIGSSAPTTTAANTSLMGIKMT 1838
Query: 171 VVGLVVGPKGATIKRI----QQQTHTYIVTPSRDKEPVFEVTGMPENVDRAREEIEAHIA 226
V L + AT + TH I P + P F V+ +P + A +A
Sbjct: 1839 TVALSSTSQTATALTVPAISSASTHKTIKNPVNNVRPGFPVS-LPLAYP-PPQFAHALLA 1896
Query: 227 LRTGGIIELTDENDFHANGTDVGFDLHHGSGGSGPGSLWSKPTPSITPTPGRKPFSSYRN 286
+T I H GT F + G P S + +P P P S +N
Sbjct: 1897 AQTFQQIRPPRLPMTHFGGT---FPPAQSTWGPFPVRPLSPARATNSPKPHMVPRHSNQN 1953
Query: 287 DSSSSLGSASTDSYFGGGTSSSAAAT--QRLADYSPPSPAL-----------------SF 327
S S + SA + + T+SS+A+T + SP SP++ +
Sbjct: 1954 SSGSQVNSAGSLTSSPTTTTSSSASTVPGTSTNGSPSSPSVRRQLFVTVVKTSNATTTTV 2013
Query: 328 AHNGNNNNNGNGYTYTAGGEASVPSP---DGCPELQPTFDPAPAPPPG----APL----- 375
+NNN TA A+ P P + P P+ PA P G +PL
Sbjct: 2014 TTTASNNN-------TAPTNATYPMPTAKEHYPVSSPSSPSPPAQPGGVSRNSPLDCGSA 2066
Query: 376 ----IWAQFERSPGGGPAAPVS-----SSCSSSASSSASSSSVVFPGGGASAP 419
+ + E+ G P + +S SSS SSSA S+ PG + P
Sbjct: 2067 SPNKVASSSEQEAGSPPVVETTNTRPPNSSSSSGSSSAHSNQQQPPGSVSQEP 2119
Score = 37.0 bits (84), Expect = 0.049
Identities = 88/403 (21%), Positives = 120/403 (29%), Gaps = 56/403 (13%)
Query: 94 AKTNTYIKTPVRGEEPVFVVTGRKEDVAMARREIISAAEHFSMIRASRNKNTALNGAVPG 153
A T+ IK PV P F V+ + AA+ F IR R T G P
Sbjct: 1860 ASTHKTIKNPVNNVRPGFPVSLPLAYPPPQFAHALLAAQTFQQIRPPRLPMTHFGGTFPP 1919
Query: 154 PPNLPGQTTIQVRVPYRVVGLVVGPKGATIKRIQQQTH---------------TYIVTPS 198
+ G ++ P R PK + R Q T + S
Sbjct: 1920 AQSTWGPFPVRPLSPARATN---SPKPHMVPRHSNQNSSGSQVNSAGSLTSSPTTTTSSS 1976
Query: 199 RDKEPVFEVTGMPENVDRARE----EIEAHIALRTGGIIELTDENDFHANGTDVGFDLHH 254
P G P + R+ ++ A T ++ N N T
Sbjct: 1977 ASTVPGTSTNGSPSSPSVRRQLFVTVVKTSNATTTTVTTTASNNNTAPTNATYPMPTAKE 2036
Query: 255 GSGGSGPGSLWSKPTPSITPTPGRKPFSSYRNDSSSSLGSASTDSYFGGGTSSSAAATQR 314
S P S PS PG +S + S+S ++ S G+ T
Sbjct: 2037 HYPVSSPSS------PSPPAQPGGVSRNSPLDCGSASPNKVASSSEQEAGSPPVVETTNT 2090
Query: 315 LADYSPPSPALSFAHNGNNNNNGN-----------------GYTYTAGGEASVPSPDGCP 357
S S S AH+ G+ T A+ +P P
Sbjct: 2091 RPPNSSSSSGSSSAHSNQQQPPGSVSQEPRPPLQQSQVPPPEVRMTVPPLATSSAPVAVP 2150
Query: 358 ELQPTFDPAPAPPPGAPLIWAQFE----RSPGGGPAAPVSSSCSSSASSSA--SSSSVVF 411
P P P P G P + E R P G AP +S S SS A S + +
Sbjct: 2151 STAPVTYPMPQTPMGCPQPTPKMETPAIRPPPHGTTAPHKNSASVQNSSVAVLSVNHIKR 2210
Query: 412 PGGGASA---PSNANLGLLVHRRLHPGTS--CPRLSPPLHMAP 449
P S+ PS + +HP P S PL P
Sbjct: 2211 PHSVPSSVQLPSTLSTQSACQNSVHPANKPIAPNFSAPLPFGP 2253
Score = 31.2 bits (69), Expect = 2.7
Identities = 13/24 (54%), Positives = 16/24 (66%)
Query: 2 PSSLFADLERNGSGGGGGGSSGGG 25
PSS + + + SGGGGGG GGG
Sbjct: 83 PSSSESSSDSDNSGGGGGGGGGGG 106
Score = 30.8 bits (68), Expect = 3.5
Identities = 11/19 (57%), Positives = 14/19 (73%)
Query: 7 ADLERNGSGGGGGGSSGGG 25
+D + +G GGGGGG GGG
Sbjct: 90 SDSDNSGGGGGGGGGGGGG 108
Score = 29.6 bits (65), Expect = 7.8
Identities = 13/23 (56%), Positives = 14/23 (60%)
Query: 3 SSLFADLERNGSGGGGGGSSGGG 25
SS +D G GGGGGG GGG
Sbjct: 88 SSSDSDNSGGGGGGGGGGGGGGG 110
>gi|38683816 ankyrin repeat domain protein 17 isoform b [Homo sapiens]
Length = 2352
Score = 52.8 bits (125), Expect = 9e-07
Identities = 100/413 (24%), Positives = 159/413 (38%), Gaps = 68/413 (16%)
Query: 61 KKSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYI---KTPVRGEEPVFVVTGRK 117
K+ V ++ V VPS+ ++ ++GR GC I A+R T +I K + + + + G
Sbjct: 1470 KEVVRRSKKVSVPSTV-ISRVIGRGGCNINAIREFTGAHIDIDKQKDKTGDRIITIRGGT 1528
Query: 118 EDVAMARREIISA------AEHFSMIRASRNKNTALNGAV-PGPPNLPGQTTIQVRVPYR 170
E A ++I+A E +I +R K+++ N + P T + +
Sbjct: 1529 ESTRQA-TQLINALIKDPDKEIDELIPKNRLKSSSANSKIGSSAPTTTAANTSLMGIKMT 1587
Query: 171 VVGLVVGPKGATIKRI----QQQTHTYIVTPSRDKEPVFEVTGMPENVDRAREEIEAHIA 226
V L + AT + TH I P + P F V+ +P + A +A
Sbjct: 1588 TVALSSTSQTATALTVPAISSASTHKTIKNPVNNVRPGFPVS-LPLAYP-PPQFAHALLA 1645
Query: 227 LRTGGIIELTDENDFHANGTDVGFDLHHGSGGSGPGSLWSKPTPSITPTPGRKPFSSYRN 286
+T I H GT F + G P S + +P P P S +N
Sbjct: 1646 AQTFQQIRPPRLPMTHFGGT---FPPAQSTWGPFPVRPLSPARATNSPKPHMVPRHSNQN 1702
Query: 287 DSSSSLGSASTDSYFGGGTSSSAAAT--QRLADYSPPSPAL-----------------SF 327
S S + SA + + T+SS+A+T + SP SP++ +
Sbjct: 1703 SSGSQVNSAGSLTSSPTTTTSSSASTVPGTSTNGSPSSPSVRRQLFVTVVKTSNATTTTV 1762
Query: 328 AHNGNNNNNGNGYTYTAGGEASVPSP---DGCPELQPTFDPAPAPPPG----APL----- 375
+NNN TA A+ P P + P P+ PA P G +PL
Sbjct: 1763 TTTASNNN-------TAPTNATYPMPTAKEHYPVSSPSSPSPPAQPGGVSRNSPLDCGSA 1815
Query: 376 ----IWAQFERSPGGGPAAPVS-----SSCSSSASSSASSSSVVFPGGGASAP 419
+ + E+ G P + +S SSS SSSA S+ PG + P
Sbjct: 1816 SPNKVASSSEQEAGSPPVVETTNTRPPNSSSSSGSSSAHSNQQQPPGSVSQEP 1868
Score = 37.0 bits (84), Expect = 0.049
Identities = 88/403 (21%), Positives = 120/403 (29%), Gaps = 56/403 (13%)
Query: 94 AKTNTYIKTPVRGEEPVFVVTGRKEDVAMARREIISAAEHFSMIRASRNKNTALNGAVPG 153
A T+ IK PV P F V+ + AA+ F IR R T G P
Sbjct: 1609 ASTHKTIKNPVNNVRPGFPVSLPLAYPPPQFAHALLAAQTFQQIRPPRLPMTHFGGTFPP 1668
Query: 154 PPNLPGQTTIQVRVPYRVVGLVVGPKGATIKRIQQQTH---------------TYIVTPS 198
+ G ++ P R PK + R Q T + S
Sbjct: 1669 AQSTWGPFPVRPLSPARATN---SPKPHMVPRHSNQNSSGSQVNSAGSLTSSPTTTTSSS 1725
Query: 199 RDKEPVFEVTGMPENVDRARE----EIEAHIALRTGGIIELTDENDFHANGTDVGFDLHH 254
P G P + R+ ++ A T ++ N N T
Sbjct: 1726 ASTVPGTSTNGSPSSPSVRRQLFVTVVKTSNATTTTVTTTASNNNTAPTNATYPMPTAKE 1785
Query: 255 GSGGSGPGSLWSKPTPSITPTPGRKPFSSYRNDSSSSLGSASTDSYFGGGTSSSAAATQR 314
S P S PS PG +S + S+S ++ S G+ T
Sbjct: 1786 HYPVSSPSS------PSPPAQPGGVSRNSPLDCGSASPNKVASSSEQEAGSPPVVETTNT 1839
Query: 315 LADYSPPSPALSFAHNGNNNNNGN-----------------GYTYTAGGEASVPSPDGCP 357
S S S AH+ G+ T A+ +P P
Sbjct: 1840 RPPNSSSSSGSSSAHSNQQQPPGSVSQEPRPPLQQSQVPPPEVRMTVPPLATSSAPVAVP 1899
Query: 358 ELQPTFDPAPAPPPGAPLIWAQFE----RSPGGGPAAPVSSSCSSSASSSA--SSSSVVF 411
P P P P G P + E R P G AP +S S SS A S + +
Sbjct: 1900 STAPVTYPMPQTPMGCPQPTPKMETPAIRPPPHGTTAPHKNSASVQNSSVAVLSVNHIKR 1959
Query: 412 PGGGASA---PSNANLGLLVHRRLHPGTS--CPRLSPPLHMAP 449
P S+ PS + +HP P S PL P
Sbjct: 1960 PHSVPSSVQLPSTLSTQSACQNSVHPANKPIAPNFSAPLPFGP 2002
Score = 31.2 bits (69), Expect = 2.7
Identities = 13/24 (54%), Positives = 16/24 (66%)
Query: 2 PSSLFADLERNGSGGGGGGSSGGG 25
PSS + + + SGGGGGG GGG
Sbjct: 83 PSSSESSSDSDNSGGGGGGGGGGG 106
Score = 30.8 bits (68), Expect = 3.5
Identities = 11/19 (57%), Positives = 14/19 (73%)
Query: 7 ADLERNGSGGGGGGSSGGG 25
+D + +G GGGGGG GGG
Sbjct: 90 SDSDNSGGGGGGGGGGGGG 108
Score = 29.6 bits (65), Expect = 7.8
Identities = 13/23 (56%), Positives = 14/23 (60%)
Query: 3 SSLFADLERNGSGGGGGGSSGGG 25
SS +D G GGGGGG GGG
Sbjct: 88 SSSDSDNSGGGGGGGGGGGGGGG 110
>gi|32528299 baculoviral IAP repeat-containing protein 4 [Homo
sapiens]
Length = 497
Score = 52.4 bits (124), Expect = 1e-06
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 5/91 (5%)
Query: 478 LGAQLPGLQPSDTSGSSSSSSSSSSSSSSSSGLRRKGSRDCSVCFESEVIAALVPCGHNL 537
L A L Q SS +S S+ R + + C +C + + VPCGH +
Sbjct: 410 LVADLVNAQKDSMQDESSQTSLQKEISTEEQLRRLQEEKLCKICMDRNIAIVFVPCGHLV 469
Query: 538 FCMECANRICEKSEPECPVCHTAVTQAIRIF 568
C +CA + +CP+C+T +T +IF
Sbjct: 470 TCKQCAEAV-----DKCPMCYTVITFKQKIF 495
>gi|17402900 far upstream element-binding protein [Homo sapiens]
Length = 644
Score = 52.0 bits (123), Expect = 1e-06
Identities = 72/284 (25%), Positives = 110/284 (38%), Gaps = 58/284 (20%)
Query: 12 NGSGGGGGGSSGGGETLDDQR-ALQLALDQLSLLGLDSDEGASLYD-------------S 57
+GS GGGGG GGG D + ALQ A + +G D+ + D
Sbjct: 12 SGSAGGGGGGGGGGGVNDAFKDALQRARQIAAKIGGDAGTSLNSNDYGYGGQKRPLEDGD 71
Query: 58 EPRKKSVN---------------------MTECVPVPSSEHVAEIVGRQGCKIKALRAKT 96
+P K V MTE VP V I+GR G +I ++ ++
Sbjct: 72 QPDAKKVAPQNDSFGTQLPPMHQQQSRSVMTEEYKVPDGM-VGFIIGRGGEQISRIQQES 130
Query: 97 NTYIK-TPVRGEEPV--FVVTGRKEDVAMARREIISAAEHFSMIRASRNKNTALNGAVPG 153
I+ P G P ++TG E V A+R + E K G G
Sbjct: 131 GCKIQIAPDSGGLPERSCMLTGTPESVQSAKRLLDQIVE----------KGRPAPGFHHG 180
Query: 154 PPNLPGQTTIQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIV-----TPSRDKEPVFEVT 208
PG ++ +P GLV+G G TIK++Q++ +V + + +T
Sbjct: 181 DG--PGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRIT 238
Query: 209 GMPENVDRAREEIEAHIALRTGGIIELTDENDFHANGTDVGFDL 252
G P V +A+E + + GG E+ +E G + G D+
Sbjct: 239 GDPYKVQQAKEMV-LELIRDQGGFREVRNEYGSRIGGNE-GIDV 280
Score = 51.2 bits (121), Expect = 2e-06
Identities = 94/375 (25%), Positives = 129/375 (34%), Gaps = 69/375 (18%)
Query: 70 VPVPSSEHVAEIVGRQGCKIKALRAKTNTYIK-TPVRGEEP--VFVVTGRKEDVAMARRE 126
VP+P V ++GR G IK ++ I+ P G P + +TG + A
Sbjct: 280 VPIPRFA-VGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPERIAQITGPPDRCQHAAEI 338
Query: 127 I------ISAAEHFSMIRASRNKNTALNGAVPGPPNLPGQTTIQVRVPYRVVGLVVGPKG 180
I + A R + GPP G VP GL++G G
Sbjct: 339 ITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPG--GLQEFNFIVPTGKTGLIIGKGG 396
Query: 181 ATIKRIQQQTHTYIV---TPSRDKEP---VFEVTGMPENVDRAREEIEAHIALRTGGIIE 234
TIK I QQ+ I P + +P +F + G P+ +D AR+ IE I G +
Sbjct: 397 ETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKIG---GPVNP 453
Query: 235 LTDENDFHANGTDVGFDLHHGSGGSGPGSLWS--KPTPSITPTPGRKPFSSYRNDSSSSL 292
L +G H G GPG+ P P PG P +
Sbjct: 454 LGPPVPHGPHGVP---GPHGPPGPPGPGTPMGPYNPAPYNPGPPGPAPHGPPAPYAPQGW 510
Query: 293 GS--------ASTDSYFGGGTSSSAAATQRLADY----SPPSPALSFAHNGNNNNNGNGY 340
G+ A D G +SAA A Y + P PA NG
Sbjct: 511 GNAYPHWQQQAPPDPAKAGTDPNSAAWAAYYAHYYQQQAQPPPAAPAGAPTTTQTNGQ-- 568
Query: 341 TYTAGGEASVPSPDGCPELQPTFD----------PAP--APPPGAP---LIWAQFER--- 382
G+ P+P G + ++ PAP APP G P WA++ R
Sbjct: 569 -----GDQQNPAPAGQVDYTKAWEEYYKKMGQAVPAPTGAPPGGQPDYSAAWAEYYRQQA 623
Query: 383 ------SPGGGPAAP 391
SP G P P
Sbjct: 624 AYYAQTSPQGMPQHP 638
Score = 39.7 bits (91), Expect = 0.008
Identities = 42/172 (24%), Positives = 67/172 (38%), Gaps = 32/172 (18%)
Query: 65 NMTECVPVPSSEHVAEIVGRQGCKIKALRAKT------------NTYIKTPVRGEEPVFV 112
N + + +P+S+ ++G+ G IK L+ + NT P+R
Sbjct: 185 NAVQEIMIPASK-AGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLR------- 236
Query: 113 VTGRKEDVAMARREIISAAEHFSMIRASRNKNTALNGAVPGPPNLPGQTTIQVRVPYRVV 172
+TG V A+ ++ R RN+ + G G I V +P V
Sbjct: 237 ITGDPYKVQQAKEMVLELIRDQGGFREVRNEYGSRIG---------GNEGIDVPIPRFAV 287
Query: 173 GLVVGPKGATIKRIQQQTHTYIVTPSRD---KEPVFEVTGMPENVDRAREEI 221
G+V+G G IK+IQ I D E + ++TG P+ A E I
Sbjct: 288 GIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPERIAQITGPPDRCQHAAEII 339
>gi|161016767 mucin 21 [Homo sapiens]
Length = 566
Score = 50.4 bits (119), Expect = 4e-06
Identities = 68/299 (22%), Positives = 111/299 (37%), Gaps = 43/299 (14%)
Query: 229 TGGIIELTDENDFHANGTDV-------------GFDLHHGSGGSGPGSLWSKPTPSITPT 275
T + + ++FH + + G + S S S S T S + T
Sbjct: 68 TSNGVSIVTNSEFHTTSSGISTATNSEFSTVSSGISIATNSESSTTSSGASTATNSESST 127
Query: 276 PGRKPFSSYRNDSSSSLGSASTDSYFGGGTSSSAAATQRLADYSPPSPALSFAHNGNNNN 335
P ++ +DSS++ AST + T+SS A+T ++ S S S A N ++
Sbjct: 128 PSSGASTATNSDSSTTSSGASTATNSDSSTTSSEASTATNSESSTTSSGASTATNSESST 187
Query: 336 NGNGYTYTAGGEASVPSPDGCPELQPTFDPAPAPPPGAPLIWAQFER--SPGGGPAAPVS 393
+ + E+S S GA R S G G A
Sbjct: 188 VSSRASTATNSESSTTS------------------SGASTATNSESRTTSNGAGTATNSE 229
Query: 394 SSCSSSASSSASSSSVVFPGGGASAPSNANLGLLVHRRLHPGTSCPRLSPPLHMAPGAGE 453
SS +SS +S+A++S P GA +N+ GT+ S + +G
Sbjct: 230 SSTTSSGASTATNSESSTPSSGAGTATNSESST---TSSGAGTATNSESSTV----SSGI 282
Query: 454 HHLARRVRSDPGGGGLAYA---AYANGLGAQLPGLQPSDTSGSSSSSSSSSSSSSSSSG 509
+ S P G + GA S T+ S +S++++S SS++SSG
Sbjct: 283 STVTNSESSTPSSGANTATNSESSTTSSGANTATNSDSSTTSSGASTATNSESSTTSSG 341
Score = 50.4 bits (119), Expect = 4e-06
Identities = 66/284 (23%), Positives = 103/284 (36%), Gaps = 23/284 (8%)
Query: 246 TDVGFDLHHGSGGSGPGSLWSKPTPSITPTPGRKPFSSYRNDSSSSLGSASTDSYFGGGT 305
T G S S P S S T S + T ++ +DSS++ AST + T
Sbjct: 113 TSSGASTATNSESSTPSSGASTATNSDSSTTSSGASTATNSDSSTTSSEASTATNSESST 172
Query: 306 SSSAAATQRLADYSPPSPALSFAHNGNNNNNGNGYTY--------------TAGGEASVP 351
+SS A+T ++ S S S A N ++ +G + TA S
Sbjct: 173 TSSGASTATNSESSTVSSRASTATNSESSTTSSGASTATNSESRTTSNGAGTATNSESST 232
Query: 352 SPDGCPELQPTFDPAPAPPPGAPLIWAQFERSPGGGPAAPVSSSCSSSASSSASSSSVVF 411
+ G + P+ G S G G A SS SS S+ ++S
Sbjct: 233 TSSGASTATNSESSTPSSGAGTATNSESSTTSSGAGTATNSESSTVSSGISTVTNSESST 292
Query: 412 PGGGASAPSNANLGLLVHRRLHPGTSCPRLSPPLHMAPGAGEHHLARRVRSDPGGGGLAY 471
P GA+ +N+ G + S + GA A S G +
Sbjct: 293 PSSGANTATNSE-----SSTTSSGANTATNSDSSTTSSGAS---TATNSESSTTSSGAST 344
Query: 472 AAYANGLGAQLPGLQPSDTSGSSSSSSSSSSSSSSSSGLRRKGS 515
A + G + SGSS++SS +S++++S S G+
Sbjct: 345 ATNSES-STTSSGASTATNSGSSTTSSGTSTATNSESSTVSSGA 387
Score = 49.3 bits (116), Expect = 9e-06
Identities = 68/301 (22%), Positives = 109/301 (36%), Gaps = 13/301 (4%)
Query: 234 ELTDENDFHANGTDVGFDLHHGSGGSGPGSLWSKPTPSITPTPGRKPFSSYRNDSSSSLG 293
E + + ++ T G S S S S T S + T ++ ++S ++
Sbjct: 161 EASTATNSESSTTSSGASTATNSESSTVSSRASTATNSESSTTSSGASTATNSESRTTSN 220
Query: 294 SASTDSYFGGGTSSSAAATQRLADYSPPSPALSFAHNGNNNNNGNGYTYTAGGEASVPSP 353
A T + T+SS A+T ++ S PS A N ++ +G E+S S
Sbjct: 221 GAGTATNSESSTTSSGASTATNSESSTPSSGAGTATNSESSTTSSGAGTATNSESSTVS- 279
Query: 354 DGCPELQPTFDPAPAPPPGAPLIWAQFERSPGGGPAAPVSSSCSSSASSSASSSSVVFPG 413
G + + P+ S G A SS +SS +S+A++S
Sbjct: 280 SGISTVTNSESSTPSSGANTATNSESSTTSSGANTATNSDSSTTSSGASTATNSESSTTS 339
Query: 414 GGASAPSNANLGLLVHRRLHPGTSCPRLSPPLHMAPGAGEHHLARRVRSDPGGGGLAYAA 473
GAS +N+ G S S + G A S G + A
Sbjct: 340 SGASTATNSESSTT-----SSGASTATNSGSSTTSSGTST---ATNSESSTVSSGASTAT 391
Query: 474 YANGL----GAQLPGLQPSDTSGSSSSSSSSSSSSSSSSGLRRKGSRDCSVCFESEVIAA 529
+ GA S T S +S++++S SS++SSG + SV AA
Sbjct: 392 TSESSTTSSGASTATNSESSTVSSGASTATNSESSTTSSGANTATNSGSSVTSAGSGTAA 451
Query: 530 L 530
L
Sbjct: 452 L 452
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 50.4 bits (119), Expect = 4e-06
Identities = 57/174 (32%), Positives = 77/174 (44%), Gaps = 15/174 (8%)
Query: 346 GEASVPSPDGCPELQ----PTFDPAPAPPPGAPLIWAQFERSPGGGPAAPVSSSCSSSAS 401
G SVP+P G P P A P A L A+ RS ++ SSS SSS+S
Sbjct: 2492 GMLSVPAP-GVPHSDVGEPPASTGAQQPSALAALQPAKERRSSSSSSSSSSSSSSSSSSS 2550
Query: 402 SSASSS-SVVFPGGGASAPSNANLGLLVHRRLHPGTSCPRLSPPLHMAPGAGEHHLARRV 460
SS+SSS S G+S P + L +R+ T P+ + P RR
Sbjct: 2551 SSSSSSGSSSSDSEGSSLPVQPEVAL---KRVPSPTPAPKEAVREGRPPEPTPAKRKRRS 2607
Query: 461 RSDPGGGGLAYAAYANGLGAQLPGLQPSDTSGSSSSSSSSSSSSSSSSGLRRKG 514
S + ++ ++ + S +S SSSSSSSSSSSSSSS + G
Sbjct: 2608 SSSSSSSSSSSSSSSSSSSSS------SSSSSSSSSSSSSSSSSSSSPSPAKPG 2655
Score = 47.8 bits (112), Expect = 3e-05
Identities = 105/493 (21%), Positives = 168/493 (34%), Gaps = 77/493 (15%)
Query: 37 ALDQLSLLGLDSDEGASLYDSEPRKKSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAKT 96
AL LSL G + A+ Y S R + + P S H V G + A A
Sbjct: 2305 ALAALSLTGSGTPPTAANYPSSSRTPQAPASANLVGPRSAHATAPVNIAGSRTAAALAPA 2364
Query: 97 NTYIKTPVRGEEPVFVVTGRKEDVAMARREIISAAEHFSMIRASRNKNTALNGAVPGPPN 156
+ T R + V ++ E +S ++ +R++ PP+
Sbjct: 2365 SL---TSARMAPALSGANLTSPRVPLSAYERVSGRTSPPLLDRARSRT---------PPS 2412
Query: 157 LPGQTTI-QVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVD 215
P Q+ + R P + P + + Q Q + + + D+ P
Sbjct: 2413 APSQSRMTSERAPSPSSRMGQAPSQSLLPPAQDQPRSPVPSAFSDQSRCLIAQTTP---- 2468
Query: 216 RAREEIEAHIALRTGGIIELTDENDFHANGTDVGFD-LHHGSGGSGPGSLWSKPTPSITP 274
+ +L +G + T H V + H G P S ++ ++
Sbjct: 2469 -----VAGSQSLSSGAVATTTSSAGDHNGMLSVPAPGVPHSDVGEPPASTGAQQPSALAA 2523
Query: 275 TPGRKPFSSYRNDSSSSLGSASTDSYFGGGTSSSAAATQRLADYSPPSPALSFAHNGNNN 334
K S + SSSS S+S+ S +SS ++++ P P ++
Sbjct: 2524 LQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALKR----- 2578
Query: 335 NNGNGYTYTAGGEASVPSPDGCPELQPTFDPAPAPPPG--------APLIWAQFERSPGG 386
VPSP P+ P P P + + S
Sbjct: 2579 ---------------VPSPTPAPKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSS 2623
Query: 387 GPAAPVSSSCSSSASSSASSSSVVFPGGGASAPSNANLGLLVHRRLHPGTSCPRLSPPLH 446
++ SSS SSS+SSS+SSSS +S+PS A G + P+ + P
Sbjct: 2624 SSSSSSSSSSSSSSSSSSSSSS-------SSSPSPAKPG---------PQALPKPASPKK 2667
Query: 447 MAPGAGEHHLARR-VRSDPGGGGLAYAAYANGLGAQLPGLQPSDTSGSSSSSSSSS---- 501
PG R+ + S L+Y+ + + P QPS SSSS S
Sbjct: 2668 PPPGERRSRSPRKPIDSLRDSRSLSYSP----VERRRPSPQPSPRDQQSSSSERGSRRGQ 2723
Query: 502 -SSSSSSSGLRRK 513
S S S RR+
Sbjct: 2724 RGDSRSPSHKRRR 2736
Score = 43.1 bits (100), Expect = 7e-04
Identities = 77/276 (27%), Positives = 99/276 (35%), Gaps = 47/276 (17%)
Query: 299 SYFGGGTSSSAAATQRLADYSPPSPALS------FAHNGNNNNNGNGYTYTAGGEASVPS 352
S G GT +AA + +P +PA + AH N T A AS+ S
Sbjct: 2310 SLTGSGTPPTAA-NYPSSSRTPQAPASANLVGPRSAHATAPVNIAGSRTAAALAPASLTS 2368
Query: 353 PDGCPELQPTFDPAPAPPPGA----------PLIWAQFERSPGGGPAAPVSSSCSSSASS 402
P L +P P A PL+ R+P P+AP S +S +
Sbjct: 2369 ARMAPALSGANLTSPRVPLSAYERVSGRTSPPLLDRARSRTP---PSAPSQSRMTSERAP 2425
Query: 403 SASSSSVVFPGGGASAP-------------SNANLGLLVHRRLHPGTSCPRLSPPLHMAP 449
S SS P P S+ + L+ G+
Sbjct: 2426 SPSSRMGQAPSQSLLPPAQDQPRSPVPSAFSDQSRCLIAQTTPVAGSQSLSSGAVATTTS 2485
Query: 450 GAGEHHLARRVRSDPGGGGLAYAAYANGLGAQLPG----LQP---------SDTSGSSSS 496
AG+H+ V + PG GAQ P LQP S +S SSSS
Sbjct: 2486 SAGDHNGMLSVPA-PGVPHSDVGEPPASTGAQQPSALAALQPAKERRSSSSSSSSSSSSS 2544
Query: 497 SSSSSSSSSSSSGLRRKGSRDCSVCFESEVIAALVP 532
SSSSSSSSSSSSG S S+ + EV VP
Sbjct: 2545 SSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALKRVP 2580
>gi|217416388 neuralized homolog 1B [Homo sapiens]
Length = 555
Score = 49.7 bits (117), Expect = 7e-06
Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 13/88 (14%)
Query: 494 SSSSSSSSSSSSSSSGLRRKGSR-------------DCSVCFESEVIAALVPCGHNLFCM 540
SSS+S SS ++ SS L S +C+VCF+ EV + CGH C
Sbjct: 466 SSSASESSLVTAPSSPLSPPVSPVFSPPEPAGIKNGECTVCFDGEVDTVIYTCGHMCLCH 525
Query: 541 ECANRICEKSEPECPVCHTAVTQAIRIF 568
C R+ ++ CP+C + I+I+
Sbjct: 526 SCGLRLKRQARACCPICRRPIKDVIKIY 553
>gi|4502141 baculoviral IAP repeat-containing protein 2 [Homo
sapiens]
Length = 618
Score = 49.3 bits (116), Expect = 9e-06
Identities = 25/68 (36%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Query: 502 SSSSSSSGLRR-KGSRDCSVCFESEVIAALVPCGHNLFCMECANRICEKSEPECPVCHTA 560
S S LRR + R C VC + EV +PCGH + C ECA S +CP+C
Sbjct: 554 SGLSLEEQLRRLQEERTCKVCMDKEVSVVFIPCGHLVVCQECA-----PSLRKCPICRGI 608
Query: 561 VTQAIRIF 568
+ +R F
Sbjct: 609 IKGTVRTF 616
>gi|33946285 baculoviral IAP repeat-containing protein 3 [Homo
sapiens]
Length = 604
Score = 48.5 bits (114), Expect = 2e-05
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Query: 511 RRKGSRDCSVCFESEVIAALVPCGHNLFCMECANRICEKSEPECPVCHTAVTQAIRIF 568
R + R C VC + EV +PCGH + C +CA S +CP+C + + +R F
Sbjct: 550 RLQEERTCKVCMDKEVSIVFIPCGHLVVCKDCA-----PSLRKCPICRSTIKGTVRTF 602
>gi|4502139 baculoviral IAP repeat-containing protein 3 [Homo
sapiens]
Length = 604
Score = 48.5 bits (114), Expect = 2e-05
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Query: 511 RRKGSRDCSVCFESEVIAALVPCGHNLFCMECANRICEKSEPECPVCHTAVTQAIRIF 568
R + R C VC + EV +PCGH + C +CA S +CP+C + + +R F
Sbjct: 550 RLQEERTCKVCMDKEVSIVFIPCGHLVVCKDCA-----PSLRKCPICRSTIKGTVRTF 602
>gi|28559039 mediator complex subunit 1 [Homo sapiens]
Length = 1581
Score = 48.1 bits (113), Expect = 2e-05
Identities = 64/273 (23%), Positives = 102/273 (37%), Gaps = 36/273 (13%)
Query: 257 GGSGPGSLWSKPTPSITPTPGRKPFSSYRNDSSSSLGSASTDSYF--GGGTSSSAAATQR 314
G PGS TP TP + + +G S+ S + G SSS + +
Sbjct: 1039 GSKSPGSAGRSQTPPGVATPPIPKITIQIPKGTVMVGKPSSHSQYTSSGSVSSSGSKSHH 1098
Query: 315 LADYSPPSPALSFAHNGNNNNNGNGYTYTAGGEASVPSPDGCPELQPTFDPAPAPPPGAP 374
S S A + ++ + G+ + + S G + + +
Sbjct: 1099 SHSSSSSSSASTSGKMKSSKSEGSSSSKLSSSMYSSQGSSGSSQSKNS------------ 1146
Query: 375 LIWAQFERSPGGGPAAPVSSSCSSSASSSASSSSVVFPGGGASAPSNANLGL--LVHRRL 432
S GG P SS + SS SSS+ + P G S+ N +L +
Sbjct: 1147 --------SQSGGK--PGSSPITKHGLSSGSSSTKMKPQGKPSSLMNPSLSKPNISPSHS 1196
Query: 433 HPGTSCPRLSPPLHMAPGAGEHHLARR-VRSDPGGGGLAYAAYANGL---------GAQL 482
P +L+ P+ PG A+ + S GG ++ + ++G+ G+
Sbjct: 1197 RPPGGSDKLASPMKPVPGTPPSSKAKSPISSGSGGSHMSGTSSSSGMKSSSGLGSSGSLS 1256
Query: 483 PGLQPSDTSGSSSSSSSSSSSSSSSSGLRRKGS 515
PS S ++SSSS SSS SS SS + GS
Sbjct: 1257 QKTPPSSNSCTASSSSFSSSGSSMSSSQNQHGS 1289
Score = 39.7 bits (91), Expect = 0.008
Identities = 66/286 (23%), Positives = 103/286 (36%), Gaps = 35/286 (12%)
Query: 256 SGGSGPGSLWSKPTPSITPTPGRKPFSSYRNDSSSSLGSASTDSYFGGGTSSSAAATQRL 315
S GS S + S T G+ S SSS L S+ S G+S S ++Q
Sbjct: 1091 SSGSKSHHSHSSSSSSSASTSGKMKSSKSEGSSSSKLSSSMYSSQGSSGSSQSKNSSQ-- 1148
Query: 316 ADYSPPSPALS-FAHNGNNNNNGNGYTYTAGGEASVPSPD-GCPELQPTFDPAPAPPPGA 373
S P S +G ++ + + G +S+ +P P + P+ PP G+
Sbjct: 1149 ---SGGKPGSSPITKHGLSSGSSSTKMKPQGKPSSLMNPSLSKPNISPSHS---RPPGGS 1202
Query: 374 PLIWAQFERSPGGGPA----APVSSSCSSSASSSASSSSVVFPGGGASAPSNANLGLLVH 429
+ + + PG P+ +P+SS S S SSSS G S+ + G L
Sbjct: 1203 DKLASPMKPVPGTPPSSKAKSPISSGSGGSHMSGTSSSS-----GMKSSSGLGSSGSLSQ 1257
Query: 430 RRLHPGTSCPRLSPPLHMA----PGAGEHHLARRVRSDPGG---------GGLAYAAYAN 476
+ SC S + + H + + +S L + +
Sbjct: 1258 KTPPSSNSCTASSSSFSSSGSSMSSSQNQHGSSKGKSPSRNKKPSLTAVIDKLKHGVVTS 1317
Query: 477 GLGAQLP---GLQPSDTSGSSSSSSSSSSSSSSSSGLRRKGSRDCS 519
G G + P + S S S SS + S G R K +D S
Sbjct: 1318 GPGGEDPLDGQMGVSTNSSSHPMSSKHNMSGGEFQGKREKSDKDKS 1363
>gi|169173184 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1230
Score = 47.0 bits (110), Expect = 5e-05
Identities = 68/270 (25%), Positives = 107/270 (39%), Gaps = 40/270 (14%)
Query: 243 ANGTDVGFDLHHGSGGSGPGSLWSKPTPSITPTPGRKPFSSYRNDSSSSLGSASTDSYFG 302
A+ + G SG + P W P+ S +P ++S +DS + SAS S
Sbjct: 178 ASSSASGASTPSDSGWASPSVFWVSPSTSWASSPSDFGWASTPSDSGWASSSASCIS--- 234
Query: 303 GGTSSSAAATQRLADYSPPSPA-LSFAHNGNNNNNGNGYTYTAGGEASVPSPDG--CPEL 359
S+S A+T + ++ PS + +S + + + ++ +G+ ++ S+ S G CP
Sbjct: 235 --PSASGASTSSDSGWASPSASWVSTSTSRASTSSDSGWASSSASWDSITSDSGWVCPSA 292
Query: 360 QPTFDPAPAPPPGAPLIWAQFERSPGGGPAAPVSSSCSSSASSSASSSS-VVFPGGGASA 418
WA S P+ SSS S S +S+ S S F GASA
Sbjct: 293 S----------------WASSSASWASAPSDSGSSSPSVSRASTLSVSGWASFSASGASA 336
Query: 419 PSNANLGLLVHRRLHPGTSCPRLSPPLHMAPGAGEHHLARRVRSDPG-GGGLAYAAYANG 477
PS++ H + S +P A SD G A A +
Sbjct: 337 PSDSGW------TSHSASGVSTTSDSGWASPSAS----GASTSSDSGWASPSASWASPSA 386
Query: 478 LGAQLPGLQPSDTSGSSSSSSSSSSSSSSS 507
GA PSD+ +S S+S +S S+ S
Sbjct: 387 SGAS----TPSDSGWASPSASGASMPSAPS 412
Score = 40.0 bits (92), Expect = 0.006
Identities = 66/274 (24%), Positives = 104/274 (37%), Gaps = 18/274 (6%)
Query: 246 TDVGFDLHHGSGGSGPGSLWSKPTPSITPTPG----RKPFSSYRNDSSSS---LGSASTD 298
+D G+ SG S P + W+ P+ S TP P +S+ + SS S SAS
Sbjct: 112 SDSGWASPSVSGASIPSAFWASPSASGASTPSDSGWASPSASWASTSSDSGWASPSASWT 171
Query: 299 SYFGGGTSSSAAATQRLADYSPPSPA---LSFAHNGNNNNNGNGYTYTAGGEASVPSPDG 355
S SSSA+ +D SP+ +S + + ++ + G+ T S
Sbjct: 172 SPSASCASSSASGASTPSDSGWASPSVFWVSPSTSWASSPSDFGWASTPSDSGWASSSAS 231
Query: 356 CPELQPTFDPAPAPPPGAPLIWAQFERSPGGGPAAPVSSSCSSS-ASSSASSSSVVFPGG 414
C + P+ A WA S + S+S S ASSSAS S+ G
Sbjct: 232 C--ISPSASGASTSSDSG---WASPSASWVSTSTSRASTSSDSGWASSSASWDSITSDSG 286
Query: 415 GA--SAPSNANLGLLVHRRLHPGTSCPRLSPPLHMAPGAGEHHLARRVRSDPGGGGLAYA 472
SA ++ G+S P +S ++ A + G +++
Sbjct: 287 WVCPSASWASSSASWASAPSDSGSSSPSVSRASTLSVSGWASFSASGASAPSDSGWTSHS 346
Query: 473 AYANGLGAQLPGLQPSDTSGSSSSSSSSSSSSSS 506
A + PS + S+SS S +S S+S
Sbjct: 347 ASGVSTTSDSGWASPSASGASTSSDSGWASPSAS 380
Score = 37.0 bits (84), Expect = 0.049
Identities = 53/198 (26%), Positives = 81/198 (40%), Gaps = 31/198 (15%)
Query: 256 SGGSGPGSLWSKPTPSITPTPGRKPFSSYRNDSSSSLGSASTDSYF----GGGTSSSAAA 311
SG + P + W + S T ++S SS+S S ++DS + SSSA+
Sbjct: 246 SGWASPSASWVSTSTSRASTSSDSGWAS----SSASWDSITSDSGWVCPSASWASSSASW 301
Query: 312 TQRLADYSPPSPALSFAHNGNNNNNGNGYTYTAGGEASVPSPDGCPE-----LQPTFDPA 366
+D SP++S A + + +G+ + AS PS G + T D
Sbjct: 302 ASAPSDSGSSSPSVSRA----STLSVSGWASFSASGASAPSDSGWTSHSASGVSTTSDSG 357
Query: 367 PAPPP--GAPLIWAQFERSPGGGPAAPVSSSCSSSASSSASSSSVVFPGGGASAPSNANL 424
A P GA SP A+P +S S+ + S +S S GAS PS +
Sbjct: 358 WASPSASGASTSSDSGWASPSASWASPSASGASTPSDSGWASPSA----SGASMPSAPS- 412
Query: 425 GLLVHRRLHPGTSCPRLS 442
L PG+ P+L+
Sbjct: 413 -------LCPGSCFPQLT 423
>gi|111120318 NK6 transcription factor related, locus 1 [Homo
sapiens]
Length = 367
Score = 47.0 bits (110), Expect = 5e-05
Identities = 42/121 (34%), Positives = 57/121 (47%), Gaps = 23/121 (19%)
Query: 388 PAAPVSSSCSSSASSSASSSSVVFPGGGASAPSNANLGLLVHRRLHPGTSCPRLSPPLHM 447
PA P SSS SSS+SSS S GG P+ L L SPP +
Sbjct: 44 PAGPPSSSSSSSSSSSPSPPLGTHNPGGLKPPATGGLSSLG-------------SPPQQL 90
Query: 448 APGAGEHHLARRVRSDPGGGGLAYAAYANGLGAQLPGLQPSDTSGSSSSSSSSSSSSSSS 507
+ A H + S P + A+ GA LP PS +S SSSSS+S+SS+S+++
Sbjct: 91 S--AATPHGINDILSRPS---MPVAS-----GAALPSASPSGSSSSSSSSASASSASAAA 140
Query: 508 S 508
+
Sbjct: 141 A 141
Score = 37.4 bits (85), Expect = 0.037
Identities = 43/152 (28%), Positives = 66/152 (43%), Gaps = 19/152 (12%)
Query: 303 GGTSSSAAATQRLADYSPPSPALSFAHNGNNNNNGNGYTYTAGG---EASVPSPDGCPEL 359
G SSS++++ S PSP L + G G + G + S +P G ++
Sbjct: 46 GPPSSSSSSSSS----SSPSPPLGTHNPGGLKPPATGGLSSLGSPPQQLSAATPHGINDI 101
Query: 360 QPTFDPAPAPPPGAPLIWAQFERSPGGGPAAPVSSSCSSSASSSASSSSVVFPGGGASAP 419
P+ GA L A SP G SSS SSS++S++S+S+ A+A
Sbjct: 102 LSR--PSMPVASGAALPSA----SPSG------SSSSSSSSASASSASAAAAAAAAAAAA 149
Query: 420 SNANLGLLVHRRLHPGTSCPRLSPPLHMAPGA 451
+++ GLL S P P L+ +P A
Sbjct: 150 ASSPAGLLAGLPRFSSLSPPPPPPGLYFSPSA 181
>gi|18375613 dachshund homolog 1 isoform b [Homo sapiens]
Length = 558
Score = 46.6 bits (109), Expect = 6e-05
Identities = 43/149 (28%), Positives = 60/149 (40%), Gaps = 18/149 (12%)
Query: 388 PAAPVSSSCSSSASSSASSSSVVFPGGGASAPSNANLGLLVHRRLHPGTSCPRLSPPLHM 447
P P+S+S SSS +++++SS+ P P+++ L + +
Sbjct: 16 PQPPISTSASSSGTTTSTSSATSSPAPSIGPPASSGPTLFRPEPIASAAAAAATVTSTGG 75
Query: 448 APGAGEHHLARRVRSDPGGGGLA---------YAAYANGLGAQLPGLQ---------PSD 489
G G + GGGG AA +NG G G+ P +
Sbjct: 76 GGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPIN 135
Query: 490 TSGSSSSSSSSSSSSSSSSGLRRKGSRDC 518
S SSSSSSSSSSSSSSS S C
Sbjct: 136 ASTGSSSSSSSSSSSSSSSSSSSSSSSSC 164
Score = 44.3 bits (103), Expect = 3e-04
Identities = 58/193 (30%), Positives = 72/193 (37%), Gaps = 45/193 (23%)
Query: 320 PPSPALSFAHNGNNNNNGNGYTYTAGGEASVPSPDGCPELQ--PT-FDPAPAPPPGAPLI 376
PP P +S + + +G T + S P+P P PT F P P A
Sbjct: 15 PPQPPIS------TSASSSGTTTSTSSATSSPAPSIGPPASSGPTLFRPEPIASAAAA-- 66
Query: 377 WAQFERSPGGGPAAPVSSSCSSSASSSASSSSVVFPGGGASAPSNANLGLLVHRRLHPGT 436
A S GGG S S+ + GGG SN N
Sbjct: 67 -AATVTSTGGGGGGGGSGGGGGSSGNGGG-------GGGGGGGSNCN------------- 105
Query: 437 SCPRLSPPLHMAPGAGEHHLARRVRSDPGGGGLAYAAYANGLGAQLPGLQPSDTSGSSSS 496
P L+ + + G G A GGG+A + N A S +S SSSS
Sbjct: 106 --PNLAAASNGSGGGGGGISA--------GGGVASSTPIN---ASTGSSSSSSSSSSSSS 152
Query: 497 SSSSSSSSSSSSG 509
SSSSSSSSSSS G
Sbjct: 153 SSSSSSSSSSSCG 165
Score = 35.4 bits (80), Expect = 0.14
Identities = 41/165 (24%), Positives = 63/165 (38%), Gaps = 32/165 (19%)
Query: 263 SLWSKPTPSITPTPGRKPFSSYRNDSSSSLGSASTDSYFGGGTSSSAAATQRLADYSPPS 322
S S P PSI P P +S+ +A+T + GGG +
Sbjct: 35 SATSSPAPSIGPPASSGPTLFRPEPIASAAAAAATVTSTGGGGGGGGSG----------- 83
Query: 323 PALSFAHNGNNNNNGNGYTYTAGGEASVPSPDGCPELQPTFDPAPAPPPGAPLIWAQFER 382
G ++GNG GG S +P+ L + + G
Sbjct: 84 --------GGGGSSGNGGGGGGGGGGSNCNPN----LAAASNGSGGGGGGI--------- 122
Query: 383 SPGGGPAAPVSSSCSSSASSSASSSSVVFPGGGASAPSNANLGLL 427
S GGG A+ + S+ +SSS+SSSS +S+ S+++ G L
Sbjct: 123 SAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSSSSCGPL 167
Score = 33.9 bits (76), Expect = 0.41
Identities = 27/77 (35%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Query: 254 HGSGGSGPGSLWSKPTPSITPTPGRKPFSSYRNDSSSSLGSASTDSYFGGGTSSSAAATQ 313
+GSGG G G S TP SS + SSSS S+S+ S +SSS
Sbjct: 113 NGSGGGGGGISAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSS----SSSSSCGPLP 168
Query: 314 RLADYSPPSPALSFAHN 330
YS PSP + N
Sbjct: 169 GKPVYSTPSPVENTPQN 185
Score = 33.5 bits (75), Expect = 0.54
Identities = 42/166 (25%), Positives = 67/166 (40%), Gaps = 24/166 (14%)
Query: 268 PTPSITPTPGRKPFSSYRNDSSSSLGSASTDSYFGGGTSSSAAATQRLADYSPPSPALSF 327
PT + P P P S+ + S ++ ++S S A++ L P + A +
Sbjct: 10 PTQLVPPQP---PISTSASSSGTTTSTSSATSSPAPSIGPPASSGPTLFRPEPIASAAAA 66
Query: 328 AHNGNNNNNGNGYTYTAGGEASVPSPDG---------C-PELQPTFDPAPAPPPGAPLIW 377
A + G G + GG S + G C P L + + G
Sbjct: 67 AATVTSTGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGI---- 122
Query: 378 AQFERSPGGGPAA--PVSSSCSSSASSSASSSSVVFPGGGASAPSN 421
S GGG A+ P+++S SS+SSS+SSSS +S+ S+
Sbjct: 123 -----SAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSSSS 163
Score = 31.2 bits (69), Expect = 2.7
Identities = 20/62 (32%), Positives = 24/62 (38%), Gaps = 6/62 (9%)
Query: 12 NGSGGGGGGSSGGGETLDDQRALQLALDQLSLLGLDSDEGASLYDSEPRKKSVNMTECVP 71
NGSGGGGGG S GG S S +S S S + + C P
Sbjct: 113 NGSGGGGGGISAGGGVASSTPI------NASTGSSSSSSSSSSSSSSSSSSSSSSSSCGP 166
Query: 72 VP 73
+P
Sbjct: 167 LP 168
Score = 30.0 bits (66), Expect = 5.9
Identities = 12/19 (63%), Positives = 13/19 (68%)
Query: 7 ADLERNGSGGGGGGSSGGG 25
A + G GGGGGGS GGG
Sbjct: 68 ATVTSTGGGGGGGGSGGGG 86
>gi|18375611 dachshund homolog 1 isoform a [Homo sapiens]
Length = 706
Score = 46.6 bits (109), Expect = 6e-05
Identities = 43/149 (28%), Positives = 60/149 (40%), Gaps = 18/149 (12%)
Query: 388 PAAPVSSSCSSSASSSASSSSVVFPGGGASAPSNANLGLLVHRRLHPGTSCPRLSPPLHM 447
P P+S+S SSS +++++SS+ P P+++ L + +
Sbjct: 16 PQPPISTSASSSGTTTSTSSATSSPAPSIGPPASSGPTLFRPEPIASAAAAAATVTSTGG 75
Query: 448 APGAGEHHLARRVRSDPGGGGLA---------YAAYANGLGAQLPGLQ---------PSD 489
G G + GGGG AA +NG G G+ P +
Sbjct: 76 GGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPIN 135
Query: 490 TSGSSSSSSSSSSSSSSSSGLRRKGSRDC 518
S SSSSSSSSSSSSSSS S C
Sbjct: 136 ASTGSSSSSSSSSSSSSSSSSSSSSSSSC 164
Score = 44.3 bits (103), Expect = 3e-04
Identities = 58/193 (30%), Positives = 72/193 (37%), Gaps = 45/193 (23%)
Query: 320 PPSPALSFAHNGNNNNNGNGYTYTAGGEASVPSPDGCPELQ--PT-FDPAPAPPPGAPLI 376
PP P +S + + +G T + S P+P P PT F P P A
Sbjct: 15 PPQPPIS------TSASSSGTTTSTSSATSSPAPSIGPPASSGPTLFRPEPIASAAAA-- 66
Query: 377 WAQFERSPGGGPAAPVSSSCSSSASSSASSSSVVFPGGGASAPSNANLGLLVHRRLHPGT 436
A S GGG S S+ + GGG SN N
Sbjct: 67 -AATVTSTGGGGGGGGSGGGGGSSGNGGG-------GGGGGGGSNCN------------- 105
Query: 437 SCPRLSPPLHMAPGAGEHHLARRVRSDPGGGGLAYAAYANGLGAQLPGLQPSDTSGSSSS 496
P L+ + + G G A GGG+A + N A S +S SSSS
Sbjct: 106 --PNLAAASNGSGGGGGGISA--------GGGVASSTPIN---ASTGSSSSSSSSSSSSS 152
Query: 497 SSSSSSSSSSSSG 509
SSSSSSSSSSS G
Sbjct: 153 SSSSSSSSSSSCG 165
Score = 35.4 bits (80), Expect = 0.14
Identities = 41/165 (24%), Positives = 63/165 (38%), Gaps = 32/165 (19%)
Query: 263 SLWSKPTPSITPTPGRKPFSSYRNDSSSSLGSASTDSYFGGGTSSSAAATQRLADYSPPS 322
S S P PSI P P +S+ +A+T + GGG +
Sbjct: 35 SATSSPAPSIGPPASSGPTLFRPEPIASAAAAAATVTSTGGGGGGGGSG----------- 83
Query: 323 PALSFAHNGNNNNNGNGYTYTAGGEASVPSPDGCPELQPTFDPAPAPPPGAPLIWAQFER 382
G ++GNG GG S +P+ L + + G
Sbjct: 84 --------GGGGSSGNGGGGGGGGGGSNCNPN----LAAASNGSGGGGGGI--------- 122
Query: 383 SPGGGPAAPVSSSCSSSASSSASSSSVVFPGGGASAPSNANLGLL 427
S GGG A+ + S+ +SSS+SSSS +S+ S+++ G L
Sbjct: 123 SAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSSSSCGPL 167
Score = 33.9 bits (76), Expect = 0.41
Identities = 27/77 (35%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Query: 254 HGSGGSGPGSLWSKPTPSITPTPGRKPFSSYRNDSSSSLGSASTDSYFGGGTSSSAAATQ 313
+GSGG G G S TP SS + SSSS S+S+ S +SSS
Sbjct: 113 NGSGGGGGGISAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSS----SSSSSCGPLP 168
Query: 314 RLADYSPPSPALSFAHN 330
YS PSP + N
Sbjct: 169 GKPVYSTPSPVENTPQN 185
Score = 33.5 bits (75), Expect = 0.54
Identities = 42/166 (25%), Positives = 67/166 (40%), Gaps = 24/166 (14%)
Query: 268 PTPSITPTPGRKPFSSYRNDSSSSLGSASTDSYFGGGTSSSAAATQRLADYSPPSPALSF 327
PT + P P P S+ + S ++ ++S S A++ L P + A +
Sbjct: 10 PTQLVPPQP---PISTSASSSGTTTSTSSATSSPAPSIGPPASSGPTLFRPEPIASAAAA 66
Query: 328 AHNGNNNNNGNGYTYTAGGEASVPSPDG---------C-PELQPTFDPAPAPPPGAPLIW 377
A + G G + GG S + G C P L + + G
Sbjct: 67 AATVTSTGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGI---- 122
Query: 378 AQFERSPGGGPAA--PVSSSCSSSASSSASSSSVVFPGGGASAPSN 421
S GGG A+ P+++S SS+SSS+SSSS +S+ S+
Sbjct: 123 -----SAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSSSS 163
Score = 31.2 bits (69), Expect = 2.7
Identities = 20/62 (32%), Positives = 24/62 (38%), Gaps = 6/62 (9%)
Query: 12 NGSGGGGGGSSGGGETLDDQRALQLALDQLSLLGLDSDEGASLYDSEPRKKSVNMTECVP 71
NGSGGGGGG S GG S S +S S S + + C P
Sbjct: 113 NGSGGGGGGISAGGGVASSTPI------NASTGSSSSSSSSSSSSSSSSSSSSSSSSCGP 166
Query: 72 VP 73
+P
Sbjct: 167 LP 168
Score = 30.0 bits (66), Expect = 5.9
Identities = 12/19 (63%), Positives = 13/19 (68%)
Query: 7 ADLERNGSGGGGGGSSGGG 25
A + G GGGGGGS GGG
Sbjct: 68 ATVTSTGGGGGGGGSGGGG 86
Score = 30.0 bits (66), Expect = 5.9
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 348 ASVPSPDGCPELQPTFDPAPAPPPGAPLIWAQFERSPGGGPAAPVSSSCSSSASSSASSS 407
A V SP E + P P AP + + R PG P++ SSS SSS + + SSS
Sbjct: 418 AQVQSPPSRVETSVIKERVPDSPSPAPSL--EEGRRPGSHPSSHRSSSVSSSPARTESSS 475
>gi|18375609 dachshund homolog 1 isoform c [Homo sapiens]
Length = 504
Score = 46.6 bits (109), Expect = 6e-05
Identities = 43/149 (28%), Positives = 60/149 (40%), Gaps = 18/149 (12%)
Query: 388 PAAPVSSSCSSSASSSASSSSVVFPGGGASAPSNANLGLLVHRRLHPGTSCPRLSPPLHM 447
P P+S+S SSS +++++SS+ P P+++ L + +
Sbjct: 16 PQPPISTSASSSGTTTSTSSATSSPAPSIGPPASSGPTLFRPEPIASAAAAAATVTSTGG 75
Query: 448 APGAGEHHLARRVRSDPGGGGLA---------YAAYANGLGAQLPGLQ---------PSD 489
G G + GGGG AA +NG G G+ P +
Sbjct: 76 GGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPIN 135
Query: 490 TSGSSSSSSSSSSSSSSSSGLRRKGSRDC 518
S SSSSSSSSSSSSSSS S C
Sbjct: 136 ASTGSSSSSSSSSSSSSSSSSSSSSSSSC 164
Score = 44.3 bits (103), Expect = 3e-04
Identities = 58/193 (30%), Positives = 72/193 (37%), Gaps = 45/193 (23%)
Query: 320 PPSPALSFAHNGNNNNNGNGYTYTAGGEASVPSPDGCPELQ--PT-FDPAPAPPPGAPLI 376
PP P +S + + +G T + S P+P P PT F P P A
Sbjct: 15 PPQPPIS------TSASSSGTTTSTSSATSSPAPSIGPPASSGPTLFRPEPIASAAAA-- 66
Query: 377 WAQFERSPGGGPAAPVSSSCSSSASSSASSSSVVFPGGGASAPSNANLGLLVHRRLHPGT 436
A S GGG S S+ + GGG SN N
Sbjct: 67 -AATVTSTGGGGGGGGSGGGGGSSGNGGG-------GGGGGGGSNCN------------- 105
Query: 437 SCPRLSPPLHMAPGAGEHHLARRVRSDPGGGGLAYAAYANGLGAQLPGLQPSDTSGSSSS 496
P L+ + + G G A GGG+A + N A S +S SSSS
Sbjct: 106 --PNLAAASNGSGGGGGGISA--------GGGVASSTPIN---ASTGSSSSSSSSSSSSS 152
Query: 497 SSSSSSSSSSSSG 509
SSSSSSSSSSS G
Sbjct: 153 SSSSSSSSSSSCG 165
Score = 35.4 bits (80), Expect = 0.14
Identities = 41/165 (24%), Positives = 63/165 (38%), Gaps = 32/165 (19%)
Query: 263 SLWSKPTPSITPTPGRKPFSSYRNDSSSSLGSASTDSYFGGGTSSSAAATQRLADYSPPS 322
S S P PSI P P +S+ +A+T + GGG +
Sbjct: 35 SATSSPAPSIGPPASSGPTLFRPEPIASAAAAAATVTSTGGGGGGGGSG----------- 83
Query: 323 PALSFAHNGNNNNNGNGYTYTAGGEASVPSPDGCPELQPTFDPAPAPPPGAPLIWAQFER 382
G ++GNG GG S +P+ L + + G
Sbjct: 84 --------GGGGSSGNGGGGGGGGGGSNCNPN----LAAASNGSGGGGGGI--------- 122
Query: 383 SPGGGPAAPVSSSCSSSASSSASSSSVVFPGGGASAPSNANLGLL 427
S GGG A+ + S+ +SSS+SSSS +S+ S+++ G L
Sbjct: 123 SAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSSSSCGPL 167
Score = 33.9 bits (76), Expect = 0.41
Identities = 27/77 (35%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Query: 254 HGSGGSGPGSLWSKPTPSITPTPGRKPFSSYRNDSSSSLGSASTDSYFGGGTSSSAAATQ 313
+GSGG G G S TP SS + SSSS S+S+ S +SSS
Sbjct: 113 NGSGGGGGGISAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSS----SSSSSCGPLP 168
Query: 314 RLADYSPPSPALSFAHN 330
YS PSP + N
Sbjct: 169 GKPVYSTPSPVENTPQN 185
Score = 33.5 bits (75), Expect = 0.54
Identities = 42/166 (25%), Positives = 67/166 (40%), Gaps = 24/166 (14%)
Query: 268 PTPSITPTPGRKPFSSYRNDSSSSLGSASTDSYFGGGTSSSAAATQRLADYSPPSPALSF 327
PT + P P P S+ + S ++ ++S S A++ L P + A +
Sbjct: 10 PTQLVPPQP---PISTSASSSGTTTSTSSATSSPAPSIGPPASSGPTLFRPEPIASAAAA 66
Query: 328 AHNGNNNNNGNGYTYTAGGEASVPSPDG---------C-PELQPTFDPAPAPPPGAPLIW 377
A + G G + GG S + G C P L + + G
Sbjct: 67 AATVTSTGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGI---- 122
Query: 378 AQFERSPGGGPAA--PVSSSCSSSASSSASSSSVVFPGGGASAPSN 421
S GGG A+ P+++S SS+SSS+SSSS +S+ S+
Sbjct: 123 -----SAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSSSS 163
Score = 31.2 bits (69), Expect = 2.7
Identities = 20/62 (32%), Positives = 24/62 (38%), Gaps = 6/62 (9%)
Query: 12 NGSGGGGGGSSGGGETLDDQRALQLALDQLSLLGLDSDEGASLYDSEPRKKSVNMTECVP 71
NGSGGGGGG S GG S S +S S S + + C P
Sbjct: 113 NGSGGGGGGISAGGGVASSTPI------NASTGSSSSSSSSSSSSSSSSSSSSSSSSCGP 166
Query: 72 VP 73
+P
Sbjct: 167 LP 168
Score = 30.0 bits (66), Expect = 5.9
Identities = 12/19 (63%), Positives = 13/19 (68%)
Query: 7 ADLERNGSGGGGGGSSGGG 25
A + G GGGGGGS GGG
Sbjct: 68 ATVTSTGGGGGGGGSGGGG 86
>gi|23397642 GREB1 protein isoform a [Homo sapiens]
Length = 1949
Score = 46.6 bits (109), Expect = 6e-05
Identities = 47/168 (27%), Positives = 63/168 (37%), Gaps = 19/168 (11%)
Query: 275 TPGRKPFSSYRNDSSSSLGSASTDSYFGGGTSSSAAATQRLADYSPPSPALSFAHNGNNN 334
+P ++ S + +SSSL S ++ S GG +S+ A + P P
Sbjct: 1115 SPMKRERSRSHDSASSSLSSKASGSALGGESSAQPTALPQGEHARSPQP----------- 1163
Query: 335 NNGNGYTYTAGGEASVP-SPDGCPELQPTFDPAPAPPPGAPLIWAQFERSPGGGPAAPVS 393
G A GE P + G P P P P P L R+ V+
Sbjct: 1164 -RGPAEEGRAPGEKQRPRASQGPPSAISRHSPGPTPQPDCSL------RTGQRSVQVSVT 1216
Query: 394 SSCSSSASSSASSSSVVFPGGGASAPSNANLGLLVHRRLHPGTSCPRL 441
SSCS +SSS SSSS V P G + L R P P+L
Sbjct: 1217 SSCSQLSSSSGSSSSSVAPAAGTWVLQASQCSLTKACRQPPIVFLPKL 1264
Score = 30.8 bits (68), Expect = 3.5
Identities = 42/132 (31%), Positives = 55/132 (41%), Gaps = 18/132 (13%)
Query: 381 ERSPGGGPAAPVSSSCSSSASSSASSSSVVFPGGGASAPSNANLGLLVHRRLHPGTSCPR 440
+RSP + S SSS SS AS S++ GG +SA A + + H + PR
Sbjct: 1113 KRSPMKRERSRSHDSASSSLSSKASGSAL---GGESSAQPTA-----LPQGEHARSPQPR 1164
Query: 441 LSPPLHMAPGAGEHHLARR------VRSDPGGGGLAYAAYANGLGAQLPGLQPSDTSGSS 494
APG + A + R PG + G + +Q S TS S
Sbjct: 1165 GPAEEGRAPGEKQRPRASQGPPSAISRHSPGPTPQPDCSLRTGQRS----VQVSVTSSCS 1220
Query: 495 SSSSSSSSSSSS 506
SSSS SSSSS
Sbjct: 1221 QLSSSSGSSSSS 1232
>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
Length = 2968
Score = 46.6 bits (109), Expect = 6e-05
Identities = 42/195 (21%), Positives = 81/195 (41%), Gaps = 8/195 (4%)
Query: 205 FEVTGMPENVDRAR------EEIEAHIALRTGGIIELTDENDFHANGTDVGFDLHHGSGG 258
FE +G P++ D+A+ EE E+ + +G + + + +G GG
Sbjct: 2535 FEDSGNPKSPDKAQAEQDGAEESESSSSSSSGSSSSSSSSSSSGSETEGEEEGDKNGDGG 2594
Query: 259 SGPGSLWSKPTPSITPTPGRKPFSSYRNDSSSSLGSASTDSYFGGGTSSSAAATQRLADY 318
G G S +P SS + SSSS S+S+ S +SSS++++ +
Sbjct: 2595 CGTGGRNCSAASSRAASPASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2654
Query: 319 SPPSPALSFAHNGNNNNNGNGYTYTAGGEASVPSPDGCPELQPTFDPAPAPPPG--APLI 376
S S + S + + ++++ + + + + + P+P P Q G P
Sbjct: 2655 SSSSSSSSSSSSSSSSSTTDEDSSCSSDDEAAPAPTAGPSAQAALPTKATKQAGKARPSA 2714
Query: 377 WAQFERSPGGGPAAP 391
+ +++P P AP
Sbjct: 2715 HSPGKKTPAPQPQAP 2729
Score = 43.5 bits (101), Expect = 5e-04
Identities = 45/152 (29%), Positives = 60/152 (39%), Gaps = 10/152 (6%)
Query: 378 AQFERSPGGGPAAPVSSSCSSSASSSASSSSVVFPGGGASAPSNANLGLLVHRRLHPGTS 437
AQ E+ + SSS SS+SSS+SSSS G N + G R S
Sbjct: 2547 AQAEQDGAEESESSSSSSSGSSSSSSSSSSSGSETEGEEEGDKNGDGGCGTGGRNCSAAS 2606
Query: 438 CPRLSPPLHMAPGAGEHHLARRVRSDPGGGGLAYAAYANGLGAQLPGLQPSDTSGSSSSS 497
SP + + S + ++ ++ + S +S SSSSS
Sbjct: 2607 SRAASPASSSSSSS----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2656
Query: 498 SSSSSSSSSSSGLRRKGSRDCSVCFESEVIAA 529
SSSSSSSSSSS D S + E A
Sbjct: 2657 SSSSSSSSSSSSSSSTTDEDSSCSSDDEAAPA 2688
Score = 42.7 bits (99), Expect = 9e-04
Identities = 58/224 (25%), Positives = 79/224 (35%), Gaps = 55/224 (24%)
Query: 343 TAGGEASVPSPDGCPELQPTFDPAPAPPPGAPLIWAQFERSPGGGPAAPVSSSCSSSASS 402
T G + S P P P PAP P AP F P P A + + +S A +
Sbjct: 2369 TPGSKKSPPEPVDKRAKAPKARPAPPQPSPAP---PAFTSCPAPEPFAELPAPATSLAPA 2425
Query: 403 SASSSSVVFPGGGASAPSNANLGLLVHRRLHPGTSCPRLSPPLH---MAPGAGEHHLARR 459
+ P + + + G RR PG L H +P + + A
Sbjct: 2426 PLITMPATRPKPKKARAAEES-GAKGPRR--PGEEAELLVKLDHEGVTSPKSKKAKEALL 2482
Query: 460 VRSDPGGGG-------LAYAAYANGLGAQLP----------------------------- 483
+R DPG GG L+ +Y G+ P
Sbjct: 2483 LREDPGAGGWQEPKSLLSLGSYPPAAGSSEPKAPWPKATDGDLAQEPGPGLTFEDSGNPK 2542
Query: 484 ----------GLQPSDTSGSSSSSSSSSSSSSSSSGLRRKGSRD 517
G + S++S SSSS SSSSSSSSSSSG +G +
Sbjct: 2543 SPDKAQAEQDGAEESESSSSSSSGSSSSSSSSSSSGSETEGEEE 2586
Score = 41.6 bits (96), Expect = 0.002
Identities = 44/156 (28%), Positives = 60/156 (38%), Gaps = 29/156 (18%)
Query: 364 DPAPAPPPGAPLIWAQFERSPGGGPAAPVSSSCSSSASSSASSSSVVFPGGGASAPSNAN 423
D A P PG FE S G P +P + + + SSS G +S+ S+++
Sbjct: 2524 DLAQEPGPGLT-----FEDS--GNPKSPDKAQAEQDGAEESESSSSSSSGSSSSSSSSSS 2576
Query: 424 LGLLVHRRLHPGTSCPRLSPPLHMAPGAGEHHLARRVRSDPGGGGLAYAAYANGLGAQLP 483
G + GE + G GG +A ++ +
Sbjct: 2577 SG----------------------SETEGEEEGDKNGDGGCGTGGRNCSAASSRAASPAS 2614
Query: 484 GLQPSDTSGSSSSSSSSSSSSSSSSGLRRKGSRDCS 519
S +S SSSSSSSSSSSSSSSS S S
Sbjct: 2615 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2650
>gi|38788243 myosin regulatory light chain interacting protein [Homo
sapiens]
Length = 445
Score = 46.6 bits (109), Expect = 6e-05
Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 11/94 (11%)
Query: 481 QLPGLQPSDTSGSSSSSSSSSSSSSSSSGLRRKGSRD------CSVCFESEVIAALVPCG 534
Q P P +S SS + SS S + + ++ R C VC E E+ + PCG
Sbjct: 344 QSPSHSPLKSSESSMNCSSCEGLSCQQTRVLQEKLRKLKEAMLCMVCCEEEINSTFCPCG 403
Query: 535 HNLFCMECANRICEKSEPECPVCHTAVTQAIRIF 568
H + C CA ++ CPVC + V ++
Sbjct: 404 HTVCCESCAAQL-----QSCPVCRSRVEHVQHVY 432
>gi|223278368 neuralized-like [Homo sapiens]
Length = 574
Score = 46.2 bits (108), Expect = 8e-05
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 488 SDTSGSSSSSSSSSSSSSSSSGLRRKGSRDCSVCFESEVIAALVPCGHNLFCMECANRIC 547
S G++ +S S S + GL + S +C++C+E V + CGH C C R+
Sbjct: 492 SSAGGTAPNSPVSLPESPVTPGLGQ-WSDECTICYEHAVDTVIYTCGHMCLCYACGLRLK 550
Query: 548 EKSEPECPVCHTAVTQAIRIF 568
+ CP+C + I+ +
Sbjct: 551 KALHACCPICRRPIKDIIKTY 571
>gi|28872796 CCAAT/enhancer binding protein beta [Homo sapiens]
Length = 345
Score = 46.2 bits (108), Expect = 8e-05
Identities = 66/230 (28%), Positives = 85/230 (36%), Gaps = 50/230 (21%)
Query: 320 PPSPALSFAHNGNNNNNGNGYTYTAGGEASVPSPDGCPELQPTFDPAPAPPPGAPLIWAQ 379
PP PA N + GG+A+ +P P P P PP G
Sbjct: 16 PPPPAFKSMEVANFYYEADCLAAAYGGKAAPAAP-------PAARPGPRPPAGELGSIGD 68
Query: 380 FERS--------PGGGPAAPVSSSCSSS--------ASSSASSS------SVVFPG--GG 415
ER+ P G P AP ++ + + A + ASS S +F GG
Sbjct: 69 HERAIDFSPYLEPLGAPQAPAPATATDTFEAAPPAPAPAPASSGQHHDFLSDLFSDDYGG 128
Query: 416 ASAPSNANLGLLVHRR-------LHPGTSCPRLSPP--------LHMAPGAGEHHLARRV 460
+ A G + R LHPG P PP L PG R+
Sbjct: 129 KNCKKPAEYGYVSLGRLGAAKGALHPGCFAPLHPPPPPPPPPAELKAEPGFEPADCKRKE 188
Query: 461 RSD-PGGGGLAYAAYANGLGAQLPGLQ--PSDTSGSSSSSSSSSSSSSSS 507
+ PGGG A + L A L G Q PS +SGS S+SSSSS + S
Sbjct: 189 EAGAPGGGAGMAAGFPYALRAYL-GYQAVPSGSSGSLSTSSSSSPPGTPS 237
Score = 42.0 bits (97), Expect = 0.002
Identities = 56/184 (30%), Positives = 69/184 (37%), Gaps = 25/184 (13%)
Query: 344 AGGEASVPSPDGCPELQPTFDPAPAPPPGAPLIWAQ-FERSPGGGPAAPVSSSCSSSASS 402
AG S+ + + P +P AP AP FE +P AP SS S
Sbjct: 60 AGELGSIGDHERAIDFSPYLEPLGAPQAPAPATATDTFEAAPPAPAPAPASSGQHHDFLS 119
Query: 403 SASSSSVVFPGGGASAPSNANLGLLVHRRL-------HPGTSCPRLSPP--------LHM 447
S GG + A G + RL HPG P PP L
Sbjct: 120 DLFSDDY----GGKNCKKPAEYGYVSLGRLGAAKGALHPGCFAPLHPPPPPPPPPAELKA 175
Query: 448 APGAGEHHLARRVRSD-PGGGGLAYAAYANGLGAQLPGLQ--PSDTSGSSSSSSSSSSSS 504
PG R+ + PGGG A + L A L G Q PS +SGS S +SSSSS
Sbjct: 176 EPGFEPADCKRKEEAGAPGGGAGMAAGFPYALRAYL-GYQAVPSGSSGSLS-TSSSSSPP 233
Query: 505 SSSS 508
+ S
Sbjct: 234 GTPS 237
>gi|57864582 hornerin [Homo sapiens]
Length = 2850
Score = 46.2 bits (108), Expect = 8e-05
Identities = 69/279 (24%), Positives = 98/279 (35%), Gaps = 61/279 (21%)
Query: 239 NDFHANGTDVGFDLHHGSGGSGPGSLWSKPTPSITPTPGRKPFSSYRNDSSSSLGSASTD 298
+ + +G+ L HG GSG G S +P+ GR S ++ S S GS
Sbjct: 1451 SSYGQHGSGSRQSLGHGQHGSGSGQ-------SPSPSRGRHGSGSGQSSSYSPYGS---- 1499
Query: 299 SYFGGGTSSSAAATQRLADYSPPSPALSFAHNGNNNNNGNGYTYTAGGEASVPSPDGCPE 358
G G SSS + + +S L + + ++G G ++ G +S G
Sbjct: 1500 ---GSGWSSSRGPYESGSSHSS---GLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSTS 1553
Query: 359 LQPTFDPAPAPPPGAPLIWAQFERSPGGGPAAPVSSSCSSSASSSASSSSVVFPGGGASA 418
Q SSSC +SS SSS G G+S
Sbjct: 1554 GQ--------------------------------SSSCGQHGASSGQSSSHGQHGSGSSQ 1581
Query: 419 PSNANLGLLVHRRLHPGTSCPRLSPPLHMAPGAGEHHLARRVRSDPGGGGLAYAA-YANG 477
S + R G+ P H G+G R G G + + + +G
Sbjct: 1582 SSG-------YGRQGSGSG----QSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGSG 1630
Query: 478 LGAQLPGLQPSDTSGSSSSSSSSSSSSSSSSGLRRKGSR 516
LG +SG SSS S S S SSG + GSR
Sbjct: 1631 LGESSGFGHHESSSGQSSSYSQHGSGSGHSSGYGQHGSR 1669
Score = 45.8 bits (107), Expect = 1e-04
Identities = 75/284 (26%), Positives = 103/284 (36%), Gaps = 31/284 (10%)
Query: 243 ANGTDVGFDLHHGSGGSGPGSLWSKPTPSITPTPGRKPFSSYRNDSSSSLGSASTDSYFG 302
++G G+ H GSG G + S R SS SS GS+S+ G
Sbjct: 937 SSGQSSGYTQH----GSGSGH-----SSSYEQHGSRSGQSSRSEQHGSSSGSSSSYGQHG 987
Query: 303 GGTSSSAAATQRLADYSPPSPALSFAHNGNNNNNGNGY-TYTAG-GEASVPSPDGCPELQ 360
G+ S Q S SP+ S +G+ + + Y Y +G G +S P
Sbjct: 988 SGSRQSLGHGQH-GSGSGQSPSPSRGRHGSGSGQSSSYGPYRSGSGWSSSRGPYESGSGH 1046
Query: 361 PTFDPAPAPPPGAPLIWAQFERSPGG-------GPAAPVSSSCSSSASSSASSSSVVFPG 413
+ G + Q S G G + SSSC +SS SSS G
Sbjct: 1047 SSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQSSSCGQHGASSGQSSSHGQHG 1106
Query: 414 GGASAPSNANLGLLVHRRLHPGTSCPRLSPPLHMAPGAGEHHLARRVRSDPGGGGLAYAA 473
G+S S + R G+ P H G+G R G G + +
Sbjct: 1107 SGSSQSSG-------YGRQGSGSG----QSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSG 1155
Query: 474 -YANGLGAQLPGLQPSDTSGSSSSSSSSSSSSSSSSGLRRKGSR 516
+ +GLG +SG SSS S S S SSG + GSR
Sbjct: 1156 QHGSGLGESSGFGHHESSSGQSSSYSQHGSGSGHSSGYGQHGSR 1199
Score = 45.8 bits (107), Expect = 1e-04
Identities = 69/279 (24%), Positives = 98/279 (35%), Gaps = 61/279 (21%)
Query: 239 NDFHANGTDVGFDLHHGSGGSGPGSLWSKPTPSITPTPGRKPFSSYRNDSSSSLGSASTD 298
+ + +G+ L HG GSG G S +P+ GR S ++ S S GS
Sbjct: 2391 SSYGQHGSGSRQSLGHGQHGSGSGQ-------SPSPSRGRHGSGSGQSSSYSPYGS---- 2439
Query: 299 SYFGGGTSSSAAATQRLADYSPPSPALSFAHNGNNNNNGNGYTYTAGGEASVPSPDGCPE 358
G G SSS + + +S L + + ++G G ++ G +S G
Sbjct: 2440 ---GSGWSSSRGPYESGSGHSS---GLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSTS 2493
Query: 359 LQPTFDPAPAPPPGAPLIWAQFERSPGGGPAAPVSSSCSSSASSSASSSSVVFPGGGASA 418
Q SSSC +SS SSS G G+S
Sbjct: 2494 GQ--------------------------------SSSCGQHGASSGQSSSHGQHGSGSSQ 2521
Query: 419 PSNANLGLLVHRRLHPGTSCPRLSPPLHMAPGAGEHHLARRVRSDPGGGGLAYAA-YANG 477
S + R G+ P H G+G R G G + + + +G
Sbjct: 2522 SSG-------YGRQGSGSG----QSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGSG 2570
Query: 478 LGAQLPGLQPSDTSGSSSSSSSSSSSSSSSSGLRRKGSR 516
LG +SG SSS S S S SSG + GSR
Sbjct: 2571 LGESSGFGHHESSSGQSSSYSQHGSGSGHSSGYGQHGSR 2609
Score = 43.5 bits (101), Expect = 5e-04
Identities = 68/286 (23%), Positives = 97/286 (33%), Gaps = 35/286 (12%)
Query: 242 HANGTDVGFDLHHGSGGSGPGSLWSKPTPSITPTPGRKPFSSYRNDSS------SSLGSA 295
H +G H SG S +S+ + G S SS SS GS+
Sbjct: 1157 HGSGLGESSGFGHHESSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGERHGSSSGSS 1216
Query: 296 STDSYFGGGTSSSAAATQRLADYSPPSPALSFAHNGNNNNNGNGYTYTAGGEASVPSPDG 355
S G G+ S+ R S SP+ +G +++ +G + G +S P
Sbjct: 1217 SHYGQHGSGSRQSSGHG-RQGSGSGHSPSRGRHGSGLGHSSSHGQHGSGSGRSSSRGPYE 1275
Query: 356 CPELQPTFDPAPAPPPGAPLIWAQFERSPGGGPAAPVSSS-----CSSSASSSASSSSVV 410
G ++ Q E G A S CS S S S
Sbjct: 1276 SRS-------------GHSSVFGQHESGSGHSSAYSQHGSGSGHFCSQGQHGSTSGQSST 1322
Query: 411 FPGGGASAPSNANLGLLVHRRLHPGTSCPRLSPPLHMAPGAGEHHLARRVRSDPGGG-GL 469
F G+S +++ G H G+ + S + GAG R R G G
Sbjct: 1323 FDQEGSSTGQSSSYG-------HRGSGSSQSSG--YGRHGAGSGQSPSRGRHGSGSGHSS 1373
Query: 470 AYAAYANGLGAQLPGLQPSDTSGSSSSSSSSSSSSSSSSGLRRKGS 515
+Y + +G G + SG SS SSS SSG + GS
Sbjct: 1374 SYGQHGSGSGWSSSSGRHGSGSGQSSGFGHHESSSWQSSGCTQHGS 1419
Score = 42.0 bits (97), Expect = 0.002
Identities = 74/299 (24%), Positives = 111/299 (37%), Gaps = 43/299 (14%)
Query: 244 NGTDVGFDLHHGSGGSGPGSLWSKPTPSITPTPGRKPFSSYRNDSSSSLGSASTDS---- 299
+G+ G HG GS G + + G+ +S ++ S GS S+ S
Sbjct: 600 HGSSSGHSSTHGQHGSTSGQ---------SSSCGQHGATSGQSSSHGQHGSGSSQSSRYG 650
Query: 300 YFGGGTSSSAAATQRLADYSPPSP----------ALSFAHNGNNNNNGNGYTYTAG-GEA 348
G G+ S + + +D+ S + S +G+ + +G+ + +G G++
Sbjct: 651 QQGSGSGQSPSRGRHGSDFGHSSSYGQHGSGSGWSSSNGPHGSVSGQSSGFGHKSGSGQS 710
Query: 349 SVPSPDGCPELQPTFDPAPAPPPGAPLIWAQFERSPGGGPAAPVSSSCSSSASSSASSSS 408
S S G + G Q RS G ++ +SSS S S SS
Sbjct: 711 SGYSQHGSGSSHSSGYRKHGSRSG------QSSRSEQHGSSSGLSSSYGQHGSGSHQSSG 764
Query: 409 VVFPGGGAS-APSNANLGLLV-----HRRLHPGTSCPRLSPPLHMAPGAGEHHLARRVRS 462
G G+ +PS G H + GTSC S H G+G+ A
Sbjct: 765 HGRQGSGSGHSPSRVRHGSSSGHSSSHGQHGSGTSCS--SSCGHYESGSGQ---ASGFGQ 819
Query: 463 DPGGGGLAYAAYANGLGAQLPGLQPSDTSGSSSSSSS--SSSSSSSSSGLRRKGSRDCS 519
G G Y+ + + G + TSG SSSS SSS SSS G S S
Sbjct: 820 HESGSGQGYSQHGSASGHFSSQGRHGSTSGQSSSSGQHDSSSGQSSSYGQHESASHHAS 878
Score = 40.8 bits (94), Expect = 0.003
Identities = 70/299 (23%), Positives = 96/299 (32%), Gaps = 46/299 (15%)
Query: 244 NGTDVGFDLHHGSGGSGPGSLWSKPTPSITPTPGRKPFSSYRNDSSSSLGSASTDSYFGG 303
+G+ +G HG GSG G S+ P R SS S G +S S G
Sbjct: 1718 HGSGLGHSSSHGQHGSGSGRSSSRG-----PYESRSGHSSVFGQHESGSGHSSAYSQHGS 1772
Query: 304 GTS--------SSAAATQRLADYSPPSPALSFAHNGNNNNNGNGYTYTAGGEASVPSPDG 355
G+ S + D S S +H + + + +Y G S SP
Sbjct: 1773 GSGHFCSQGQHGSTSGQSSTFDQEGSSTGQSSSHGQHGSGSSQSSSYGQQGSGSGQSPSR 1832
Query: 356 CPELQPTFDPAPAPPPGAPLIWAQFERSPGGGPAAPVSSSCSSSASSSASSSSVVFPGGG 415
+ + G+ W+ G G SS SSS SS G G
Sbjct: 1833 GRHGSGSGHSSSYGQHGSGSGWSSSSGRHGSGSGQ--SSGFGHHESSSWQSSGYTQHGSG 1890
Query: 416 ASAPSN-----ANLGLLVHRRLHPGTSCPRLSPPLHMA------------PGAGEHHLAR 458
+ S+ + G H +S S H + G+G+
Sbjct: 1891 SGHSSSYEQHGSRSGQSSRGEQHGSSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSPS 1950
Query: 459 RVRSDPGGG-GLAYAAYANGLGAQLPGLQPSDTSGSSSSSSSSSSSSSSSSGLRRKGSR 516
R R G G +Y Y +G SG SSS S S SSGL + SR
Sbjct: 1951 RGRHGSGSGQSSSYGPYGSG-------------SGWSSSRGPYESGSGHSSGLGHRESR 1996
Score = 40.8 bits (94), Expect = 0.003
Identities = 80/316 (25%), Positives = 107/316 (33%), Gaps = 47/316 (14%)
Query: 244 NGTDVGFDLHHGSGGSGPG----SLWSKPTPSITPTPGRKPFSSYRNDSSSSLGSASTDS 299
+G GF H S G S + S R SS SS GS+S+
Sbjct: 1865 SGQSSGFGHHESSSWQSSGYTQHGSGSGHSSSYEQHGSRSGQSSRGEQHGSSSGSSSSYG 1924
Query: 300 YFGGGTSSSAAATQRLADYSPPSPALSFAHNGNNNNNGNGY-TYTAG-GEASVPSPDGCP 357
G G+ S Q S SP+ S +G+ + + Y Y +G G +S P
Sbjct: 1925 QHGSGSRQSLGHGQH-GSGSGQSPSPSRGRHGSGSGQSSSYGPYGSGSGWSSSRGPYESG 1983
Query: 358 ELQPTFDPAPAPPPGAPLIWAQFERSPGG-------GPAAPVSSSCSSSASSSASSSSVV 410
+ G + Q S G G A+ SSSC +SS SSS
Sbjct: 1984 SGHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSASGQSSSCGQHGASSGQSSSHG 2043
Query: 411 FPGGGAS--------------APSNANLGLLVHRRLHP-----GTSCPRLSPPLHMAPGA 451
G G+S +P + G R P G+ R S PG
Sbjct: 2044 QHGSGSSQSSGYGRQGSGSGQSPGHGQRGS--GSRQSPSYGRHGSGSGRSSSSGQHGPGL 2101
Query: 452 GE-----HHLARRVRSDP-------GGGGLAYAAYANGLGAQLPGLQPSDTSGSSSSSSS 499
GE HH + +S G Y + + G G + +SGSSS
Sbjct: 2102 GESSGFGHHESSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGERHGSSSGSSSRYGQ 2161
Query: 500 SSSSSSSSSGLRRKGS 515
S S SSG R+GS
Sbjct: 2162 HGSGSRQSSGHGRQGS 2177
Score = 40.4 bits (93), Expect = 0.004
Identities = 67/294 (22%), Positives = 98/294 (33%), Gaps = 45/294 (15%)
Query: 241 FHANGTDVGFDLHHGSGGSGPGSLWSKPTPSITPTPGRKPFSSYRNDSSSSLGSASTDSY 300
F G+ G HG GSG S + S S R S G +S+
Sbjct: 1793 FDQEGSSTGQSSSHGQHGSG-----SSQSSSYGQQGSGSGQSPSRGRHGSGSGHSSSYGQ 1847
Query: 301 FGGGTSSSAAATQRLADYSPPSPALSFAHNGNNNNNGNGYTY--TAGGEASVPSPDGCPE 358
G G+ S+++ + + S F H+ +++ +GYT + G +S G
Sbjct: 1848 HGSGSGWSSSSGRHGSGSGQSS---GFGHHESSSWQSSGYTQHGSGSGHSSSYEQHGSRS 1904
Query: 359 LQPTFDPAPAPPPGAPLIWAQF-----------ERSPGGGPAAPVSSSCSSSASSSASSS 407
Q + G+ + Q + G G + S S S +SS
Sbjct: 1905 GQSSRGEQHGSSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSY 1964
Query: 408 SVVFPGGGASA---PSNANLGL---LVHRRLHPGTSCPRLSPPLHMAPGAGEHHLARRVR 461
G G S+ P + G L HR G S G G+H
Sbjct: 1965 GPYGSGSGWSSSRGPYESGSGHSSGLGHRESRSGQSS-----------GYGQH------- 2006
Query: 462 SDPGGGGLAYAAYANGLGAQLPGLQPSDTSGSSSSSSSSSSSSSSSSGLRRKGS 515
G + + + G Q +SG SSS S SS SSG R+GS
Sbjct: 2007 GSSSGHSSTHGQHGSASGQSSSCGQHGASSGQSSSHGQHGSGSSQSSGYGRQGS 2060
Score = 40.4 bits (93), Expect = 0.004
Identities = 68/291 (23%), Positives = 92/291 (31%), Gaps = 30/291 (10%)
Query: 244 NGTDVGFDLHHGSGGSGPGSLWSKPTPSITPTPGRKPFSSYRNDSSSSLGSASTDSYFGG 303
+G+ G HG GSG G S+ P R SS S G +S S G
Sbjct: 2188 HGSGSGHSSSHGQHGSGSGRSSSRG-----PYESRSGHSSVFGQHESGSGHSSAYSQHGS 2242
Query: 304 GTS--------SSAAATQRLADYSPPSPALSFAHNGNNNNNGNGYTYTAGGEASVPSPDG 355
G+ S + D S S +H + + + +Y G S SP
Sbjct: 2243 GSGHFCSQGQHGSTSGQSSTFDQEGSSTGQSSSHGQHGSGSSQSSSYGQQGSGSGQSPSR 2302
Query: 356 CPELQPTFDPAPAPPPGAPLIWAQFERSPGGGPAAPVSSSCSSSASSSASSSSVVFPGGG 415
+ + G+ W+ G G SS SSS SS G G
Sbjct: 2303 GRHGSGSGHSSSYGQHGSGSGWSSSSGRHGSGSGQ--SSGFGHHESSSWQSSGYTQHGSG 2360
Query: 416 ASAPSN-----ANLGLLVHRRLHPGTSCPRLSPPLH-----MAPGAGEHHLARRVRSDPG 465
+ S+ + G H +S S H + G G+H P
Sbjct: 2361 SGHSSSYEQHGSRSGQSSRGERHGSSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSPS 2420
Query: 466 GGGLAYAAYANGLGAQLPGLQPSDTSGSSSSSSSSSSSSSSSSGLRRKGSR 516
G + +G G SG SSS S S SSGL + SR
Sbjct: 2421 RG-----RHGSGSGQSSSYSPYGSGSGWSSSRGPYESGSGHSSGLGHRESR 2466
Score = 38.9 bits (89), Expect = 0.013
Identities = 67/288 (23%), Positives = 96/288 (33%), Gaps = 44/288 (15%)
Query: 239 NDFHANGTDVGFDLHHGSGGSGPGSLWSKPTPSITPTPGRKPFSSYRNDSSSSLGSASTD 298
+ + +G+ L HG GSG S+ +PS R S + S GS S+
Sbjct: 281 SSYGQHGSGSRQSLGHGRQGSG-----SRQSPSHV----RHGSGSGHSSSHGQHGSGSSY 331
Query: 299 SYFGGGTSSSAAATQRLADY---SPPSPALSFAHNGNNNNNGNGYTYTAGGEASVPSPDG 355
SY G S + T + S S S +G+ +++ G + G+AS G
Sbjct: 332 SYSRGHYESGSGQTSGFGQHESGSGQSSGYSKHGSGSGHSSSQGQHGSTSGQASSSGQHG 391
Query: 356 CPELQPTFDPAPAPPPGAPLIWAQFERSPGGGPAAPVSSSCSSSASSSASSSSVVFPG-- 413
Q + + Q E S+S SS SS S PG
Sbjct: 392 SSSRQSSS-------------YGQHE-----------SASRHSSGRGQHSSGSGQSPGHG 427
Query: 414 ----GGASAPSNANLGLLVHRRLHPG--TSCPRLSPPLHMAPGAGEHHLARRVRSDPGGG 467
G +PS+ G R G S S + EH G
Sbjct: 428 QRGSGSGQSPSSGQHGTGFGRSSSSGPYVSGSGYSSGFGHHESSSEHSSGYTQHGSGSGH 487
Query: 468 GLAYAAYANGLGAQLPGLQPSDTSGSSSSSSSSSSSSSSSSGLRRKGS 515
+ + + G G + ++GSSSS S S S G R GS
Sbjct: 488 SSGHGQHGSRSGQSSRGERQGSSAGSSSSYGQHGSGSRQSLGHSRHGS 535
Score = 36.6 bits (83), Expect = 0.064
Identities = 61/277 (22%), Positives = 91/277 (32%), Gaps = 24/277 (8%)
Query: 241 FHANGTDVGFDLHHGSGGSGPGSLWSKPTPSITPTPGRKPFSSYRNDSSSSLGSASTDSY 300
F G+ G HG GSG S + S S R S G +S+
Sbjct: 2263 FDQEGSSTGQSSSHGQHGSG-----SSQSSSYGQQGSGSGQSPSRGRHGSGSGHSSSYGQ 2317
Query: 301 FGGGTSSSAAATQRLADYSPPSPALSFAHNGNNNNNGNGYTY--TAGGEASVPSPDGCPE 358
G G+ S+++ + + S F H+ +++ +GYT + G +S G
Sbjct: 2318 HGSGSGWSSSSGRHGSGSGQSS---GFGHHESSSWQSSGYTQHGSGSGHSSSYEQHGSRS 2374
Query: 359 LQPTFDPAPAPPPGAPLIWAQFERSPGGGPAAPVSSSCSSSASSSASSSSVVFPGGGASA 418
Q + G+ + Q G G + S S + S S G G+
Sbjct: 2375 GQSSRGERHGSSSGSSSSYGQH----GSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQ 2430
Query: 419 PSNANLGLLVHRRLHPGTSCPRLSPPLHMAPGAGEHHLARRVRSDPGGGGLAYAAYANGL 478
S+ + G+ P G R RS G Y + +
Sbjct: 2431 SSS-------YSPYGSGSGWSSSRGPYESGSGHSSGLGHRESRSGQSSG---YGQHGSSS 2480
Query: 479 GAQLPGLQPSDTSGSSSSSSSSSSSSSSSSGLRRKGS 515
G Q TSG SSS +SS SS + GS
Sbjct: 2481 GHSSTHGQHGSTSGQSSSCGQHGASSGQSSSHGQHGS 2517
Score = 36.2 bits (82), Expect = 0.083
Identities = 69/285 (24%), Positives = 101/285 (35%), Gaps = 58/285 (20%)
Query: 236 TDENDFHANGTDVGFDLHHGSGGSGPGSLWSKPTPSITPTPGRKPFSSYRNDSSSSLGSA 295
+ + + G+ G HG GSG S+ +PS GR S R+ SS GS
Sbjct: 1110 SQSSGYGRQGSGSGQSPGHGQRGSG-----SRQSPSY----GRHGSGSGRSSSSGQHGSG 1160
Query: 296 STDSY-FGGGTSSSAAATQRLADYSPPSPALSFAHNGNNNNNGNGYTYTAGGEASVPSPD 354
+S FG SSS ++ S++ +G+ + + +GY G+ S
Sbjct: 1161 LGESSGFGHHESSSGQSS-------------SYSQHGSGSGHSSGY-----GQHGSRS-- 1200
Query: 355 GCPELQPTFDPAPAPPPGAPLIWAQFERSPGGGPAAPVSSSCSSSASSSASSSSVVFPGG 414
Q R G ++ SS S S SS G
Sbjct: 1201 -----------------------GQSSRGERHGSSSGSSSHYGQHGSGSRQSSGHGRQGS 1237
Query: 415 GAS-APSNANLGL-LVHRRLHP--GTSCPRLSPPLHMAPGAGEHHLARRVRSDPGGGGLA 470
G+ +PS G L H H G+ R S +G + + S G A
Sbjct: 1238 GSGHSPSRGRHGSGLGHSSSHGQHGSGSGRSSSRGPYESRSGHSSVFGQHESGSGHSS-A 1296
Query: 471 YAAYANGLGAQLPGLQPSDTSGSSSSSSSSSSSSSSSSGLRRKGS 515
Y+ + +G G Q TSG SS+ SS+ SS +GS
Sbjct: 1297 YSQHGSGSGHFCSQGQHGSTSGQSSTFDQEGSSTGQSSSYGHRGS 1341
Score = 35.4 bits (80), Expect = 0.14
Identities = 70/275 (25%), Positives = 91/275 (33%), Gaps = 27/275 (9%)
Query: 244 NGTDVGFDLHHGSGGSGPGSLWSKPTPSITPTPGRKPFSSYRNDSSSSLGSASTDSYFGG 303
+G+ G +G GSG S S G P S R+ SSS G +S+ G
Sbjct: 742 HGSSSGLSSSYGQHGSG--SHQSSGHGRQGSGSGHSP-SRVRHGSSS--GHSSSHGQHGS 796
Query: 304 GTSSSAAATQRLADYSPPSPALSFAHNGNNNNNGNGYTYTAGGEASVPSPDGCPELQPTF 363
GTS S++ S A F + + + G +A G S G Q +
Sbjct: 797 GTSCSSSCGHY---ESGSGQASGFGQHESGSGQGYSQHGSASGHFSSQGRHGSTSGQSSS 853
Query: 364 DPAPAPPPGAPLIWAQFERSPGGGPAAPVSSSCSSSASSSASSSSVVFPGGGASAPSNAN 423
G + Q E S+S +S S S PG G +
Sbjct: 854 SGQHDSSSGQSSSYGQHE-----------SASHHASGRGRHGSGSGQSPGHGQRGSGS-- 900
Query: 424 LGLLVHRRLHPGTSCPRLSPPLHMAPGAGEHHLARRVRSDPGGGGLAYAAYANGLGAQLP 483
G H S S H G+G + G Y + +G G
Sbjct: 901 -GQSPSYGRHGSGSGRSSSSGRH---GSGSGQSSGFGHKSSSGQSSGYTQHGSGSGHSSS 956
Query: 484 GLQPSDTSGSSSSSSS--SSSSSSSSSGLRRKGSR 516
Q SG SS S SSS SSSS G GSR
Sbjct: 957 YEQHGSRSGQSSRSEQHGSSSGSSSSYGQHGSGSR 991
Score = 35.4 bits (80), Expect = 0.14
Identities = 69/285 (24%), Positives = 100/285 (35%), Gaps = 58/285 (20%)
Query: 236 TDENDFHANGTDVGFDLHHGSGGSGPGSLWSKPTPSITPTPGRKPFSSYRNDSSSSLGSA 295
+ + + G+ G HG GSG S+ +PS GR S R+ SS GS
Sbjct: 2520 SQSSGYGRQGSGSGQSPGHGQRGSG-----SRQSPSY----GRHGSGSGRSSSSGQHGSG 2570
Query: 296 STDSY-FGGGTSSSAAATQRLADYSPPSPALSFAHNGNNNNNGNGYTYTAGGEASVPSPD 354
+S FG SSS ++ S++ +G+ + + +GY G+ S
Sbjct: 2571 LGESSGFGHHESSSGQSS-------------SYSQHGSGSGHSSGY-----GQHGSRS-- 2610
Query: 355 GCPELQPTFDPAPAPPPGAPLIWAQFERSPGGGPAAPVSSSCSSSASSSASSSSVVFPGG 414
Q R G ++ SS S S SS G
Sbjct: 2611 -----------------------GQSSRGERHGSSSGSSSHYGQHGSGSRQSSGHGRQGS 2647
Query: 415 GAS-APSNANLGL-LVHRRLHP--GTSCPRLSPPLHMAPGAGEHHLARRVRSDPGGGGLA 470
G+ +PS G L H H G+ R S G + + S G A
Sbjct: 2648 GSGQSPSRGRHGSGLGHSSSHGQHGSGSGRSSSRGPYESRLGHSSVFGQHESGSGHSS-A 2706
Query: 471 YAAYANGLGAQLPGLQPSDTSGSSSSSSSSSSSSSSSSGLRRKGS 515
Y+ + +G G Q TSG SS+ SS+ SS +GS
Sbjct: 2707 YSQHGSGSGHFCSQGQHGSTSGQSSTFDQEGSSTGQSSSYGHRGS 2751
Score = 35.0 bits (79), Expect = 0.18
Identities = 72/291 (24%), Positives = 103/291 (35%), Gaps = 60/291 (20%)
Query: 236 TDENDFHANGTDVGFDLHHGSGGSGPGSLWSKPTPSITPTPGRKPFSSYRNDSSSSLGSA 295
+ + + G+ G HG GSG S+ +PS GR S R+ SS GS
Sbjct: 1580 SQSSGYGRQGSGSGQSPGHGQRGSG-----SRQSPSY----GRHGSGSGRSSSSGQHGSG 1630
Query: 296 STDSY-FGGGTSSSAAATQRLADYSPPSPALSFAHNGNNNNNGNGYTYTAGGEASVPSPD 354
+S FG SSS ++ S++ +G+ + + +GY G+ S
Sbjct: 1631 LGESSGFGHHESSSGQSS-------------SYSQHGSGSGHSSGY-----GQHGSRS-- 1670
Query: 355 GCPELQPTFDPAPAPPPGAPLIWAQFERSPGGGPAAPVSSSCSSSASSSASSSSVVFPGG 414
Q R G ++ SS S S SS G
Sbjct: 1671 -----------------------GQSSRGERHGSSSRSSSRYGQHGSGSRQSSGHGRQGS 1707
Query: 415 GAS-APSNANLGL-LVHRRLHP--GTSCPRLSPPLHMAPGAGEHHLARRVRSDPGGGGLA 470
G+ +PS G L H H G+ R S +G + + S G A
Sbjct: 1708 GSGQSPSRGRHGSGLGHSSSHGQHGSGSGRSSSRGPYESRSGHSSVFGQHESGSGHSS-A 1766
Query: 471 YAAYANGLGAQLPGLQPSDTSGSSSS--SSSSSSSSSSSSGLRRKGSRDCS 519
Y+ + +G G Q TSG SS+ SS+ SSS G GS S
Sbjct: 1767 YSQHGSGSGHFCSQGQHGSTSGQSSTFDQEGSSTGQSSSHGQHGSGSSQSS 1817
Score = 33.9 bits (76), Expect = 0.41
Identities = 61/274 (22%), Positives = 89/274 (32%), Gaps = 51/274 (18%)
Query: 244 NGTDVGFDLHHGSGGSGPGSLWSKPTPSITPTPGRKPFSSYRNDSSSSLGSASTDSYFGG 303
+G+ G HG GSG G +P+ GR S R+ SS GS S S G
Sbjct: 883 HGSGSGQSPGHGQRGSGSGQ---------SPSYGRHGSGSGRSSSSGRHGSGSGQSSGFG 933
Query: 304 GTSSSAAATQRLADYSPPSPALSFAHNGNNNNNGNGYTY--TAGGEASVPSPDGCPELQP 361
SSS ++ + +G+ + + + Y + G++S G
Sbjct: 934 HKSSSGQSS-------------GYTQHGSGSGHSSSYEQHGSRSGQSSRSEQHGSSS--- 977
Query: 362 TFDPAPAPPPGAPLIWAQFERSPGGGPAAPVSSSCSSSASSSASSSSVVFPGGGASAPSN 421
G+ + Q G G + S S + S S G G+ S+
Sbjct: 978 ----------GSSSSYGQH----GSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSS 1023
Query: 422 ANLGLLVHRRLHPGTSCPRLSPPLHMAPGAGEHHLARRVRSDPGGGGLAYAAYANGLGAQ 481
+ G+ P G R RS G Y + + G
Sbjct: 1024 -------YGPYRSGSGWSSSRGPYESGSGHSSGLGHRESRSGQSSG---YGQHGSSSGHS 1073
Query: 482 LPGLQPSDTSGSSSSSSSSSSSSSSSSGLRRKGS 515
Q TSG SSS +SS SS + GS
Sbjct: 1074 STHGQHGSTSGQSSSCGQHGASSGQSSSHGQHGS 1107
Score = 33.5 bits (75), Expect = 0.54
Identities = 64/280 (22%), Positives = 96/280 (34%), Gaps = 68/280 (24%)
Query: 278 RKPFSSYRND---SSSSLGSASTDSYFGGGTSSSAAATQRLADYSPPSPALSFAHNGNNN 334
++ FS N SSS G ++DS+ G + + + +Y + + + +
Sbjct: 162 QRDFSGQHNSYSGQSSSYGEQNSDSHQSSGRGQCGSGSGQSPNYGQHGSGSGQSSSNDTH 221
Query: 335 NNGNGYTY------TAGGEASVPSPDGCPELQPTFDPAPAPPPGAPLIWAQFERSPGGGP 388
+G+G + ++ G++S S G G + Q G
Sbjct: 222 GSGSGQSSGFSQHKSSSGQSSGYSQHGSGS-------------GHSSGYGQH------GS 262
Query: 389 AAPVSSSCSSSASSSASSSSVVFPGGGASAPSNANLGLLVHRRLHPGTSCPRLSPPLHMA 448
+ SS SSS SSSS G G S +LG H R G+ P H+
Sbjct: 263 RSGQSSRGERHRSSSGSSSSYGQHGSG----SRQSLG---HGRQGSGSR----QSPSHVR 311
Query: 449 PGAGEHHLARRVRSDPG---------------------------GGGLAYAAYANGLGAQ 481
G+G H + + G G Y+ + +G G
Sbjct: 312 HGSGSGHSSSHGQHGSGSSYSYSRGHYESGSGQTSGFGQHESGSGQSSGYSKHGSGSGHS 371
Query: 482 LPGLQPSDTSGSSSSSS--SSSSSSSSSSGLRRKGSRDCS 519
Q TSG +SSS SSS SSS G SR S
Sbjct: 372 SSQGQHGSTSGQASSSGQHGSSSRQSSSYGQHESASRHSS 411
Score = 33.5 bits (75), Expect = 0.54
Identities = 62/281 (22%), Positives = 92/281 (32%), Gaps = 30/281 (10%)
Query: 244 NGTDVGFDLHHGSGGSGPGSLWSKPTPSITPTPGRKPFSSYRNDSSSSLGSASTDSYFGG 303
+G G HG GSG S + GR+ S ++ GS S S G
Sbjct: 2032 HGASSGQSSSHGQHGSGS---------SQSSGYGRQGSGSGQSPGHGQRGSGSRQSPSYG 2082
Query: 304 GTSSSAAATQRLADYSPP-SPALSFAHNGNNNNNGNGYTY--TAGGEASVPSPDGCPELQ 360
S + + + P + F H+ +++ + Y+ + G +S G Q
Sbjct: 2083 RHGSGSGRSSSSGQHGPGLGESSGFGHHESSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQ 2142
Query: 361 PTFDPAPAPPPGAPLIWAQFERSPGGGPAAPVSSSCSSSASSSASSSSVVFPGGGASAPS 420
+ G+ + Q G + SS S S S S G G+ S
Sbjct: 2143 SSRGERHGSSSGSSSRYGQH------GSGSRQSSGHGRQGSGSGHSPSRGRHGSGSGHSS 2196
Query: 421 NANLGLLVHRRLHPGTSCPRLSPPLHMAPGAGEHHLARRVRSDPGGGGLAYAAYANGLGA 480
+ H + G+ P G H G AY+ + +G G
Sbjct: 2197 S-------HGQHGSGSGRSSSRGPYESRSG---HSSVFGQHESGSGHSSAYSQHGSGSGH 2246
Query: 481 QLPGLQPSDTSGSSSS--SSSSSSSSSSSSGLRRKGSRDCS 519
Q TSG SS+ SS+ SSS G GS S
Sbjct: 2247 FCSQGQHGSTSGQSSTFDQEGSSTGQSSSHGQHGSGSSQSS 2287
Score = 31.2 bits (69), Expect = 2.7
Identities = 64/280 (22%), Positives = 99/280 (35%), Gaps = 48/280 (17%)
Query: 242 HANGTDVGFDLHHGSGGSGPGSLWSKPTPSITPTPGRKPFSSYRNDS----SSSLGSAST 297
H +G+ G+ H + G T + + G+ SS ++ S S+ AS
Sbjct: 820 HESGSGQGYSQHGSASGHFSSQGRHGSTSGQSSSSGQHDSSSGQSSSYGQHESASHHASG 879
Query: 298 DSYFGGGTSSSAAATQRLADYSPPSPALSFAHNGNNNNNGNGYTYTAGGEASVPSPDGCP 357
G G+ S QR S SP+ +G+ ++ +G + G++S G
Sbjct: 880 RGRHGSGSGQSPGHGQR-GSGSGQSPSYGRHGSGSGRSSSSGRHGSGSGQSS-----GFG 933
Query: 358 ELQPTFDPAPAPPPGAPLIWAQFERSPGGGPAAPVSSSCSSSASSSASSSSVVFPGGGAS 417
+ + G+ G G ++ S S SS S G+S
Sbjct: 934 HKSSSGQSSGYTQHGS-----------GSGHSSSYEQHGSRSGQSSRSEQH------GSS 976
Query: 418 APSNANLGLLVHRRLHPGTSCPRLSPPLHMAPGAGEHHLARRVRSDPGGG-GLAYAAYAN 476
+ S+++ G H S L H G+G+ R R G G +Y Y +
Sbjct: 977 SGSSSSYGQ------HGSGSRQSLGHGQH-GSGSGQSPSPSRGRHGSGSGQSSSYGPYRS 1029
Query: 477 GLGAQLPGLQPSDTSGSSSSSSSSSSSSSSSSGLRRKGSR 516
G SG SSS S S SSGL + SR
Sbjct: 1030 G-------------SGWSSSRGPYESGSGHSSGLGHRESR 1056
Score = 30.8 bits (68), Expect = 3.5
Identities = 62/279 (22%), Positives = 92/279 (32%), Gaps = 31/279 (11%)
Query: 254 HGS-----GGSGPGSLWSKPTPSITPTPGRKPFSSYRNDSSSSLGSASTDSYFGGGTSSS 308
HGS SG S+ + S SS R SS G + G G+ S
Sbjct: 377 HGSTSGQASSSGQHGSSSRQSSSYGQHESASRHSSGRGQHSSGSGQSPGHGQRGSGSGQS 436
Query: 309 AAATQRLADY---SPPSPALS-------FAHNGNNNNNGNGYTY--TAGGEASVPSPDGC 356
++ Q + S P +S F H+ +++ + +GYT + G +S G
Sbjct: 437 PSSGQHGTGFGRSSSSGPYVSGSGYSSGFGHHESSSEHSSGYTQHGSGSGHSSGHGQHGS 496
Query: 357 PELQPTFDPAPAPPPGAPLIWAQFERSPGGGPAAPVSSSCSSSASSSASSSSVVFPGGGA 416
Q + G+ + Q G G + S S S + S S G
Sbjct: 497 RSGQSSRGERQGSSAGSSSSYGQH----GSGSRQSLGHSRHGSGSGQSPSPS----RGRH 548
Query: 417 SAPSNANLGLLVHRRLHPGTSCPRLSPPLHMAPGAGEHHLARRVRSDPGGGGLAYAAYAN 476
+ S + H G R S G+G H + G Y + +
Sbjct: 549 ESGSRQSSSYGPH-----GYGSGRSSSRGPYESGSG-HSSGLGHQESRSGQSSGYGQHGS 602
Query: 477 GLGAQLPGLQPSDTSGSSSSSSSSSSSSSSSSGLRRKGS 515
G Q TSG SSS ++S SS + GS
Sbjct: 603 SSGHSSTHGQHGSTSGQSSSCGQHGATSGQSSSHGQHGS 641
>gi|21359963 ring finger and WD repeat domain 2 isoform a [Homo
sapiens]
Length = 731
Score = 46.2 bits (108), Expect = 8e-05
Identities = 49/190 (25%), Positives = 74/190 (38%), Gaps = 27/190 (14%)
Query: 382 RSPGGGPAAPVSSSCSSSASSSASSSSVVFPGGGASAPSNANLGLLVHRRLHPGTSCPRL 441
R G G A S ++S+ +SASSS +S+PS ++ + + G +
Sbjct: 5 RQAGSGSAGTSPGSSAASSVTSASSSL-------SSSPSPPSVAVSAAALVSGGVA---- 53
Query: 442 SPPLHMAPGAGEHHLARRVRSDPGGGGLAYAAYANGLGAQLPGLQPSDTSGSSSSSSSSS 501
A G R V P G A + GL +PS G SSSS S
Sbjct: 54 ----QAAGSGGLGGPVRPVLVAPAVSGSGGGAVSTGLSRHSCAARPSAGVGGSSSSLGSG 109
Query: 502 S----------SSSSSSGLRRKGSRDCSVCFESEVIAALVPCGHNLFCMECANRICEKSE 551
S + +S + C +CF+ A + CGH+ FC +C ++ E +
Sbjct: 110 SRKRPLLAPLCNGLINSYEDKSNDFVCPICFDMIEEAYMTKCGHS-FCYKCIHQSLEDNN 168
Query: 552 PECPVCHTAV 561
CP C+ V
Sbjct: 169 -RCPKCNYVV 177
>gi|50233824 ring finger and WD repeat domain 2 isoform d24 [Homo
sapiens]
Length = 707
Score = 46.2 bits (108), Expect = 8e-05
Identities = 49/190 (25%), Positives = 74/190 (38%), Gaps = 27/190 (14%)
Query: 382 RSPGGGPAAPVSSSCSSSASSSASSSSVVFPGGGASAPSNANLGLLVHRRLHPGTSCPRL 441
R G G A S ++S+ +SASSS +S+PS ++ + + G +
Sbjct: 5 RQAGSGSAGTSPGSSAASSVTSASSSL-------SSSPSPPSVAVSAAALVSGGVA---- 53
Query: 442 SPPLHMAPGAGEHHLARRVRSDPGGGGLAYAAYANGLGAQLPGLQPSDTSGSSSSSSSSS 501
A G R V P G A + GL +PS G SSSS S
Sbjct: 54 ----QAAGSGGLGGPVRPVLVAPAVSGSGGGAVSTGLSRHSCAARPSAGVGGSSSSLGSG 109
Query: 502 S----------SSSSSSGLRRKGSRDCSVCFESEVIAALVPCGHNLFCMECANRICEKSE 551
S + +S + C +CF+ A + CGH+ FC +C ++ E +
Sbjct: 110 SRKRPLLAPLCNGLINSYEDKSNDFVCPICFDMIEEAYMTKCGHS-FCYKCIHQSLEDNN 168
Query: 552 PECPVCHTAV 561
CP C+ V
Sbjct: 169 -RCPKCNYVV 177
>gi|55953110 retinoblastoma protein-binding zinc finger protein
isoform c [Homo sapiens]
Length = 1481
Score = 45.8 bits (107), Expect = 1e-04
Identities = 50/151 (33%), Positives = 67/151 (44%), Gaps = 10/151 (6%)
Query: 260 GPGSLWSKPTPSITPTPGRKPFSSYRNDSSSSLGSASTDSYFGGGTSSSAAATQRLADYS 319
GPGS + P P++ TP P S S S G SS L +
Sbjct: 727 GPGSGF--PAPTVESTPDVCPSSPALQTPSLSSGQLPP-LLIPTDPSSPPPCPPVLTVAT 783
Query: 320 PPSPALSFAHNGNNNNNGNGYTYTAG-GEASVPSPDGCPELQPTFDPAPAP-PPGAPLIW 377
PP P L +++ + + + A+ SP P L PT P+P+P PP PL+
Sbjct: 784 PPPPLLPTVPLPAPSSSASPHPCPSPLSNATAQSP--LPILSPTVSPSPSPIPPVEPLMS 841
Query: 378 AQFERSPGGGPAAPVSSSCSSSASSSASSSS 408
A SPG + SSS SSS+S S+SSSS
Sbjct: 842 A---ASPGPPTLSSSSSSSSSSSSFSSSSSS 869
Score = 37.7 bits (86), Expect = 0.029
Identities = 62/233 (26%), Positives = 75/233 (32%), Gaps = 60/233 (25%)
Query: 276 PGRKPFSSYRNDSSSSLGSASTDSYFGGGTSSSAAATQRLADYSPPSPALSFAHNGNNNN 335
P P R+ S A D G G+ A + D P SPAL
Sbjct: 701 PVENPADGTRSPSPCKSLEAQPDPDLGPGSGFPAPTVESTPDVCPSSPALQ--------- 751
Query: 336 NGNGYTYTAGGEASVPSPDGCPELQPTFDPAPAPPPGAPLIWAQFERSPGGGPAAPVSSS 395
S+ S P L PT P+ PP P + P P P+ +
Sbjct: 752 -----------TPSLSSGQLPPLLIPT---DPSSPPPCPPVLTVATPPPPLLPTVPLPAP 797
Query: 396 CSSSASSSASSSSVVFPGGGASAPSNANLGLLVHRRLHPGTSCPRLSPPLHMAPGAGEHH 455
SSSAS P A+A S P LSP + +P
Sbjct: 798 -----SSSASPHPCPSPLSNATAQS----------------PLPILSPTVSPSPSPIPPV 836
Query: 456 LARRVRSDPGGGGLAYAAYANGLGAQLPGLQPSDTSGSSSSSSSSSSSSSSSS 508
+ PG P L S +S SSSSS SSSSSSSS S
Sbjct: 837 EPLMSAASPGP----------------PTLSSSSSSSSSSSSFSSSSSSSSPS 873
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.129 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,936,548
Number of Sequences: 37866
Number of extensions: 1697938
Number of successful extensions: 22893
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 234
Number of HSP's successfully gapped in prelim test: 784
Number of HSP's that attempted gapping in prelim test: 14356
Number of HSP's gapped (non-prelim): 6285
length of query: 569
length of database: 18,247,518
effective HSP length: 108
effective length of query: 461
effective length of database: 14,157,990
effective search space: 6526833390
effective search space used: 6526833390
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.