Guide to the Human Genome
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Name: PLEKHO1 Sequence: fasta or formatted (409aa) NCBI GI: 20149626
Description:

pleckstrin homology domain containing, family O member 1

Referenced in:

Inositol Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.6         31           2
 C cysteine            1.0          4           1
 D aspartate           6.1         25           1
 E glutamate           9.0         37           2
 F phenylalanine       1.5          6           1
 G glycine             4.2         17           1
 H histidine           1.7          7           1
 I isoleucine          3.2         13           1
 K lysine              8.1         33           2
 L leucine             9.8         40           3
 M methionine          1.5          6           2
 N asparagine          3.2         13           2
 P proline             7.1         29           2
 Q glutamine           5.9         24           2
 R arginine            8.6         35           3
 S serine              9.5         39           2
 T threonine           5.4         22           2
 V valine              3.9         16           2
 W tryptophan          1.2          5           1
 Y tyrosine            1.7          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   pleckstrin homology domain containing, family O memb... 
PLEKHO2               0.134   pleckstrin homology domain containing, family O memb...
NEFH                  0.025   neurofilament, heavy polypeptide 200kDa 
PSD3                  0.025   ADP-ribosylation factor guanine nucleotide factor 6 ...
PSD3                  0.025   ADP-ribosylation factor guanine nucleotide factor 6...
ARHGAP24              0.024   Rho GTPase activating protein 24 isoform 1 
IPCEF1                0.024   phosphoinositide-binding protein PIP3-E isoform 1 [...
IPCEF1                0.024   phosphoinositide-binding protein PIP3-E isoform 1 [...
IPCEF1                0.024   phosphoinositide-binding protein PIP3-E isoform 2 [H...
CYTH1                 0.023   cytohesin 1 isoform 1 
PLEKHA6               0.023   phosphoinositol 3-phosphate-binding protein-3 
CYTH1                 0.022   cytohesin 1 isoform 2 
AKT3                  0.020   AKT3 kinase isoform 1 
AKT3                  0.020   AKT3 kinase isoform 2 
NAV3                  0.020   neuron navigator 3 
CYTH3                 0.020   cytohesin 3 
AKT2                  0.019   AKT2 kinase 
CYTH4                 0.018   cytohesin 4 
PLEKHA1               0.018   pleckstrin homology domain containing, family A (pho...
PLEKHA1               0.018   pleckstrin homology domain containing, family A (pho...
LOC100133220          0.018   PREDICTED: hypothetical protein 
AKT1                  0.018   AKT1 kinase 
AKT1                  0.018   AKT1 kinase 
AKT1                  0.018   AKT1 kinase 
VEPH1                 0.018   ventricular zone expressed PH domain homolog 1 [Homo...
LOC653061             0.016   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653061             0.016   PREDICTED: similar to Golgin subfamily A member 8-l...
PRPF4B                0.016   serine/threonine-protein kinase PRP4K 
PRKCSH                0.015   protein kinase C substrate 80K-H isoform 2 
DGKH                  0.014   diacylglycerol kinase, eta isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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