Search of human proteins with 4758826

Search of human proteins with 4758826

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4758826 neurturin preproprotein [Homo sapiens]
         (197 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4758826 neurturin preproprotein [Homo sapiens]                     402   e-112
gi|40549413 glial cell derived neurotrophic factor isoform 3 [Ho...   100   1e-21
gi|40549411 glial cell derived neurotrophic factor isoform 2 pre...   100   1e-21
gi|4503975 glial cell derived neurotrophic factor isoform 1 prep...   100   1e-21
gi|16950645 neurotrophic factor artemin isoform 2 [Homo sapiens]       95   4e-20
gi|209954781 neurotrophic factor artemin isoform 1 precursor [Ho...    95   4e-20
gi|209954778 neurotrophic factor artemin isoform 3 precursor [Ho...    95   4e-20
gi|209954776 neurotrophic factor artemin isoform 1 precursor [Ho...    95   4e-20
gi|209977029 neurotrophic factor artemin isoform 3 precursor [Ho...    95   4e-20
gi|4758974 persephin precursor [Homo sapiens]                          88   4e-18
gi|153792495 growth differentiation factor 15 [Homo sapiens]           47   8e-06
gi|239757187 PREDICTED: similar to growth differentiation factor...    47   8e-06
gi|157266298 anti-Mullerian hormone [Homo sapiens]                     47   1e-05
gi|239754987 PREDICTED: hypothetical protein [Homo sapiens]            36   0.024
gi|239749506 PREDICTED: hypothetical protein [Homo sapiens]            36   0.024
gi|239743640 PREDICTED: hypothetical protein XP_002342920 [Homo ...    36   0.024
gi|20070266 RAS-like GTP-binding protein REM [Homo sapiens]            32   0.35 
gi|115430237 spectrin, beta, non-erythrocytic 4 isoform sigma1 [...    31   0.78 
gi|4506109 protamine 1 [Homo sapiens]                                  30   1.0  
gi|239741585 PREDICTED: hypothetical protein XP_002342243 [Homo ...    30   1.3  
gi|22035558 transcription initiation factor IIIB isoform 3 [Homo...    30   1.3  
gi|22035556 transcription initiation factor IIIB isoform 1 [Homo...    30   1.3  
gi|102469037 jun D proto-oncogene [Homo sapiens]                       29   2.3  
gi|253735778 Rho/Rac guanine nucleotide exchange factor 2 isofor...    29   3.0  
gi|253735775 Rho/Rac guanine nucleotide exchange factor 2 isofor...    29   3.0  
gi|15011974 Rho/Rac guanine nucleotide exchange factor 2 isoofor...    29   3.0  
gi|90903240 glutathione peroxidase 4 isoform C precursor [Homo s...    29   3.0  
gi|112807221 N-acetylgalactosaminyltransferase 12 [Homo sapiens]       29   3.0  
gi|164663768 hypothetical protein LOC339263 [Homo sapiens]             29   3.0  
gi|222446620 hypothetical protein LOC342346 [Homo sapiens]             28   3.9  

>gi|4758826 neurturin preproprotein [Homo sapiens]
          Length = 197

 Score =  402 bits (1032), Expect = e-112
 Identities = 197/197 (100%), Positives = 197/197 (100%)

Query: 1   MQRWKAAALASVLCSSVLSIWMCREGLLLSHRLGPALVPLHRLPRTLDARIARLAQYRAL 60
           MQRWKAAALASVLCSSVLSIWMCREGLLLSHRLGPALVPLHRLPRTLDARIARLAQYRAL
Sbjct: 1   MQRWKAAALASVLCSSVLSIWMCREGLLLSHRLGPALVPLHRLPRTLDARIARLAQYRAL 60

Query: 61  LQGAPDAMELRELTPWAGRPPGPRRRAGPRRRRARARLGARPCGLRELEVRVSELGLGYA 120
           LQGAPDAMELRELTPWAGRPPGPRRRAGPRRRRARARLGARPCGLRELEVRVSELGLGYA
Sbjct: 61  LQGAPDAMELRELTPWAGRPPGPRRRAGPRRRRARARLGARPCGLRELEVRVSELGLGYA 120

Query: 121 SDETVLFRYCAGACEAAARVYDLGLRRLRQRRRLRRERVRAQPCCRPTAYEDEVSFLDAH 180
           SDETVLFRYCAGACEAAARVYDLGLRRLRQRRRLRRERVRAQPCCRPTAYEDEVSFLDAH
Sbjct: 121 SDETVLFRYCAGACEAAARVYDLGLRRLRQRRRLRRERVRAQPCCRPTAYEDEVSFLDAH 180

Query: 181 SRYHTVHELSARECACV 197
           SRYHTVHELSARECACV
Sbjct: 181 SRYHTVHELSARECACV 197


>gi|40549413 glial cell derived neurotrophic factor isoform 3 [Homo
           sapiens]
          Length = 133

 Score =  100 bits (248), Expect = 1e-21
 Identities = 48/115 (41%), Positives = 72/115 (62%), Gaps = 5/115 (4%)

Query: 87  AGPRRRRARARLGARP----CGLRELEVRVSELGLGYASDETVLFRYCAGACEAAARVYD 142
           A P   R + R G R     C L  + + V++LGLGY + E ++FRYC+G+C+AA   YD
Sbjct: 20  ANPENSRGKGRRGQRGKNRGCVLTAIHLNVTDLGLGYETKEELIFRYCSGSCDAAETTYD 79

Query: 143 LGLRRLRQRRRLRRERVRAQPCCRPTAYEDEVSFLDAHSRYHTVHELSARECACV 197
             L+ L + RRL  ++V  Q CCRP A++D++SFLD +  YH + + SA+ C C+
Sbjct: 80  KILKNLSRNRRLVSDKV-GQACCRPIAFDDDLSFLDDNLVYHILRKHSAKRCGCI 133


>gi|40549411 glial cell derived neurotrophic factor isoform 2
           precursor [Homo sapiens]
          Length = 185

 Score =  100 bits (248), Expect = 1e-21
 Identities = 48/115 (41%), Positives = 72/115 (62%), Gaps = 5/115 (4%)

Query: 87  AGPRRRRARARLGARP----CGLRELEVRVSELGLGYASDETVLFRYCAGACEAAARVYD 142
           A P   R + R G R     C L  + + V++LGLGY + E ++FRYC+G+C+AA   YD
Sbjct: 72  ANPENSRGKGRRGQRGKNRGCVLTAIHLNVTDLGLGYETKEELIFRYCSGSCDAAETTYD 131

Query: 143 LGLRRLRQRRRLRRERVRAQPCCRPTAYEDEVSFLDAHSRYHTVHELSARECACV 197
             L+ L + RRL  ++V  Q CCRP A++D++SFLD +  YH + + SA+ C C+
Sbjct: 132 KILKNLSRNRRLVSDKV-GQACCRPIAFDDDLSFLDDNLVYHILRKHSAKRCGCI 185


>gi|4503975 glial cell derived neurotrophic factor isoform 1
           preproprotein [Homo sapiens]
          Length = 211

 Score =  100 bits (248), Expect = 1e-21
 Identities = 48/115 (41%), Positives = 72/115 (62%), Gaps = 5/115 (4%)

Query: 87  AGPRRRRARARLGARP----CGLRELEVRVSELGLGYASDETVLFRYCAGACEAAARVYD 142
           A P   R + R G R     C L  + + V++LGLGY + E ++FRYC+G+C+AA   YD
Sbjct: 98  ANPENSRGKGRRGQRGKNRGCVLTAIHLNVTDLGLGYETKEELIFRYCSGSCDAAETTYD 157

Query: 143 LGLRRLRQRRRLRRERVRAQPCCRPTAYEDEVSFLDAHSRYHTVHELSARECACV 197
             L+ L + RRL  ++V  Q CCRP A++D++SFLD +  YH + + SA+ C C+
Sbjct: 158 KILKNLSRNRRLVSDKV-GQACCRPIAFDDDLSFLDDNLVYHILRKHSAKRCGCI 211


>gi|16950645 neurotrophic factor artemin isoform 2 [Homo sapiens]
          Length = 237

 Score = 94.7 bits (234), Expect = 4e-20
 Identities = 61/127 (48%), Positives = 72/127 (56%), Gaps = 6/127 (4%)

Query: 75  PWAGRPPGPRR-RAGPRRRRARARLGARPCGLRELEVRVSELGLGYASDETVLFRYCAGA 133
           P +  P G R  RAG    RARA  GAR C LR   V V  LGLG+ SDE V FR+C+G+
Sbjct: 112 PPSALPRGGRAARAGGPGSRARAA-GARGCRLRSQLVPVRALGLGHRSDELVRFRFCSGS 170

Query: 134 CEAAARVYDLGLRRLRQRRRLR---RERVRAQPCCRPTAYEDEVSFLDAHSRYHTVHELS 190
           C  A   +DL L  L     LR     R  +QPCCRPT YE  VSF+D +S + TV  LS
Sbjct: 171 CRRARSPHDLSLASLLGAGALRPPPGSRPVSQPCCRPTRYE-AVSFMDVNSTWRTVDRLS 229

Query: 191 ARECACV 197
           A  C C+
Sbjct: 230 ATACGCL 236


>gi|209954781 neurotrophic factor artemin isoform 1 precursor [Homo
           sapiens]
          Length = 220

 Score = 94.7 bits (234), Expect = 4e-20
 Identities = 61/127 (48%), Positives = 72/127 (56%), Gaps = 6/127 (4%)

Query: 75  PWAGRPPGPRR-RAGPRRRRARARLGARPCGLRELEVRVSELGLGYASDETVLFRYCAGA 133
           P +  P G R  RAG    RARA  GAR C LR   V V  LGLG+ SDE V FR+C+G+
Sbjct: 95  PPSALPRGGRAARAGGPGSRARAA-GARGCRLRSQLVPVRALGLGHRSDELVRFRFCSGS 153

Query: 134 CEAAARVYDLGLRRLRQRRRLR---RERVRAQPCCRPTAYEDEVSFLDAHSRYHTVHELS 190
           C  A   +DL L  L     LR     R  +QPCCRPT YE  VSF+D +S + TV  LS
Sbjct: 154 CRRARSPHDLSLASLLGAGALRPPPGSRPVSQPCCRPTRYE-AVSFMDVNSTWRTVDRLS 212

Query: 191 ARECACV 197
           A  C C+
Sbjct: 213 ATACGCL 219


>gi|209954778 neurotrophic factor artemin isoform 3 precursor [Homo
           sapiens]
          Length = 228

 Score = 94.7 bits (234), Expect = 4e-20
 Identities = 61/127 (48%), Positives = 72/127 (56%), Gaps = 6/127 (4%)

Query: 75  PWAGRPPGPRR-RAGPRRRRARARLGARPCGLRELEVRVSELGLGYASDETVLFRYCAGA 133
           P +  P G R  RAG    RARA  GAR C LR   V V  LGLG+ SDE V FR+C+G+
Sbjct: 103 PPSALPRGGRAARAGGPGSRARAA-GARGCRLRSQLVPVRALGLGHRSDELVRFRFCSGS 161

Query: 134 CEAAARVYDLGLRRLRQRRRLR---RERVRAQPCCRPTAYEDEVSFLDAHSRYHTVHELS 190
           C  A   +DL L  L     LR     R  +QPCCRPT YE  VSF+D +S + TV  LS
Sbjct: 162 CRRARSPHDLSLASLLGAGALRPPPGSRPVSQPCCRPTRYE-AVSFMDVNSTWRTVDRLS 220

Query: 191 ARECACV 197
           A  C C+
Sbjct: 221 ATACGCL 227


>gi|209954776 neurotrophic factor artemin isoform 1 precursor [Homo
           sapiens]
          Length = 220

 Score = 94.7 bits (234), Expect = 4e-20
 Identities = 61/127 (48%), Positives = 72/127 (56%), Gaps = 6/127 (4%)

Query: 75  PWAGRPPGPRR-RAGPRRRRARARLGARPCGLRELEVRVSELGLGYASDETVLFRYCAGA 133
           P +  P G R  RAG    RARA  GAR C LR   V V  LGLG+ SDE V FR+C+G+
Sbjct: 95  PPSALPRGGRAARAGGPGSRARAA-GARGCRLRSQLVPVRALGLGHRSDELVRFRFCSGS 153

Query: 134 CEAAARVYDLGLRRLRQRRRLR---RERVRAQPCCRPTAYEDEVSFLDAHSRYHTVHELS 190
           C  A   +DL L  L     LR     R  +QPCCRPT YE  VSF+D +S + TV  LS
Sbjct: 154 CRRARSPHDLSLASLLGAGALRPPPGSRPVSQPCCRPTRYE-AVSFMDVNSTWRTVDRLS 212

Query: 191 ARECACV 197
           A  C C+
Sbjct: 213 ATACGCL 219


>gi|209977029 neurotrophic factor artemin isoform 3 precursor [Homo
           sapiens]
          Length = 228

 Score = 94.7 bits (234), Expect = 4e-20
 Identities = 61/127 (48%), Positives = 72/127 (56%), Gaps = 6/127 (4%)

Query: 75  PWAGRPPGPRR-RAGPRRRRARARLGARPCGLRELEVRVSELGLGYASDETVLFRYCAGA 133
           P +  P G R  RAG    RARA  GAR C LR   V V  LGLG+ SDE V FR+C+G+
Sbjct: 103 PPSALPRGGRAARAGGPGSRARAA-GARGCRLRSQLVPVRALGLGHRSDELVRFRFCSGS 161

Query: 134 CEAAARVYDLGLRRLRQRRRLR---RERVRAQPCCRPTAYEDEVSFLDAHSRYHTVHELS 190
           C  A   +DL L  L     LR     R  +QPCCRPT YE  VSF+D +S + TV  LS
Sbjct: 162 CRRARSPHDLSLASLLGAGALRPPPGSRPVSQPCCRPTRYE-AVSFMDVNSTWRTVDRLS 220

Query: 191 ARECACV 197
           A  C C+
Sbjct: 221 ATACGCL 227


>gi|4758974 persephin precursor [Homo sapiens]
          Length = 156

 Score = 88.2 bits (217), Expect = 4e-18
 Identities = 52/109 (47%), Positives = 64/109 (58%), Gaps = 9/109 (8%)

Query: 89  PRRRRARARLGARPCGLRELEVRVSELGLGYASDETVLFRYCAGACEAAARV-YDLGLRR 147
           P  R  RA  G  PC L  L + V+ELGLGYAS+E V+FRYCAG+C   AR  + L L R
Sbjct: 54  PLARLRRALSG--PCQLWSLTLSVAELGLGYASEEKVIFRYCAGSCPRGARTQHGLALAR 111

Query: 148 LRQRRRLRRERVRAQPCCRPTAYEDEVSFLDAHSRYHTVHELSARECAC 196
           L+      + R    PCCRPT Y D V+FLD   R+  + +LSA  C C
Sbjct: 112 LQ-----GQGRAHGGPCCRPTRYTD-VAFLDDRHRWQRLPQLSAAACGC 154


>gi|153792495 growth differentiation factor 15 [Homo sapiens]
          Length = 308

 Score = 47.4 bits (111), Expect = 8e-06
 Identities = 38/125 (30%), Positives = 53/125 (42%), Gaps = 12/125 (9%)

Query: 84  RRRAGPRRRRARARLG-------ARPCGLRELEVRVSELGLG--YASDETVLFRYCAGAC 134
           R +A   RRRARAR G        R C L  +   + +LG      S   V    C GAC
Sbjct: 185 RPQAARGRRRARARNGDHCPLGPGRCCRLHTVRASLEDLGWADWVLSPREVQVTMCIGAC 244

Query: 135 EAAARVYDLGLRRLRQRRRLRRERVRAQPCCRPTAYEDEVSF--LDAHSRYHTVHELSAR 192
            +  R  ++  +      RL+ + V A PCC P +Y   V     D      T  +L A+
Sbjct: 245 PSQFRAANMHAQIKTSLHRLKPDTVPA-PCCVPASYNPMVLIQKTDTGVSLQTYDDLLAK 303

Query: 193 ECACV 197
           +C C+
Sbjct: 304 DCHCI 308


>gi|239757187 PREDICTED: similar to growth differentiation factor 15
           [Homo sapiens]
          Length = 270

 Score = 47.4 bits (111), Expect = 8e-06
 Identities = 38/125 (30%), Positives = 53/125 (42%), Gaps = 12/125 (9%)

Query: 84  RRRAGPRRRRARARLG-------ARPCGLRELEVRVSELGLG--YASDETVLFRYCAGAC 134
           R +A   RRRARAR G        R C L  +   + +LG      S   V    C GAC
Sbjct: 147 RPQAARGRRRARARNGDHCPLGPGRCCRLHTVRASLEDLGWADWVLSPREVQVTMCIGAC 206

Query: 135 EAAARVYDLGLRRLRQRRRLRRERVRAQPCCRPTAYEDEVSF--LDAHSRYHTVHELSAR 192
            +  R  ++  +      RL+ + V A PCC P +Y   V     D      T  +L A+
Sbjct: 207 PSQFRAANMHAQIKTSLHRLKPDTVPA-PCCVPASYNPMVLIQKTDTGVSLQTYDDLLAK 265

Query: 193 ECACV 197
           +C C+
Sbjct: 266 DCHCI 270


>gi|157266298 anti-Mullerian hormone [Homo sapiens]
          Length = 560

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 55/193 (28%), Positives = 69/193 (35%), Gaps = 21/193 (10%)

Query: 21  WMCREGLLLSHRLGPALVPLHRLPRTLDARIARLAQYRALLQGAPDAM--ELREL----- 73
           W       ++  L  A   L  LP    A    LA+  AL  G P  +   LR L     
Sbjct: 371 WATALARRVAAELQAAAAELRSLPGLPPATAPLLARLLALCPGGPGGLGDPLRALLLLKA 430

Query: 74  -----TPWAGRPPGPRRRAGPRRRRARARLGARPCGLRELEVRVSELGLGYASDETVLFR 128
                  W GR P   R  G  +R A A     PC LREL V +          ET    
Sbjct: 431 LQGLRVEWRGRDP---RGPGRAQRSAGATAADGPCALRELSVDL-RAERSVLIPETYQAN 486

Query: 129 YCAGAC--EAAARVYDLGLR-RLRQRRRLRRERVRAQPCCRPTAYEDE--VSFLDAHSRY 183
            C G C    + R    G    L  + + R   +   PCC PTAY  +  +S  +     
Sbjct: 487 NCQGVCGWPQSDRNPRYGNHVVLLLKMQARGAALARPPCCVPTAYAGKLLISLSEERISA 546

Query: 184 HTVHELSARECAC 196
           H V  + A EC C
Sbjct: 547 HHVPNMVATECGC 559


>gi|239754987 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 412

 Score = 35.8 bits (81), Expect = 0.024
 Identities = 27/76 (35%), Positives = 32/76 (42%), Gaps = 13/76 (17%)

Query: 30  SHRLGPALVPLHRLPRTLDARIARLAQYRALLQGAPDAMELRELTPWAGRPPGPRRRAGP 89
           S   G A+V   ++P +L             L+GAPDA   R   P  G  P P  RA  
Sbjct: 65  SRLFGSAVVKAQQVPLSLGGH----------LRGAPDAEPAR---PAEGARPSPGTRARK 111

Query: 90  RRRRARARLGARPCGL 105
            R RAR     RPC L
Sbjct: 112 TRPRARTASTRRPCAL 127


>gi|239749506 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 446

 Score = 35.8 bits (81), Expect = 0.024
 Identities = 27/76 (35%), Positives = 32/76 (42%), Gaps = 13/76 (17%)

Query: 30  SHRLGPALVPLHRLPRTLDARIARLAQYRALLQGAPDAMELRELTPWAGRPPGPRRRAGP 89
           S   G A+V   ++P +L             L+GAPDA   R   P  G  P P  RA  
Sbjct: 65  SRLFGSAVVKAQQVPLSLGGH----------LRGAPDAEPAR---PAEGARPSPGTRARK 111

Query: 90  RRRRARARLGARPCGL 105
            R RAR     RPC L
Sbjct: 112 TRPRARTASTRRPCAL 127


>gi|239743640 PREDICTED: hypothetical protein XP_002342920 [Homo
           sapiens]
          Length = 487

 Score = 35.8 bits (81), Expect = 0.024
 Identities = 27/76 (35%), Positives = 32/76 (42%), Gaps = 13/76 (17%)

Query: 30  SHRLGPALVPLHRLPRTLDARIARLAQYRALLQGAPDAMELRELTPWAGRPPGPRRRAGP 89
           S   G A+V   ++P +L             L+GAPDA   R   P  G  P P  RA  
Sbjct: 65  SRLFGSAVVKAQQVPLSLGGH----------LRGAPDAEPAR---PAEGARPSPGTRARK 111

Query: 90  RRRRARARLGARPCGL 105
            R RAR     RPC L
Sbjct: 112 TRPRARTASTRRPCAL 127


>gi|20070266 RAS-like GTP-binding protein REM [Homo sapiens]
          Length = 298

 Score = 32.0 bits (71), Expect = 0.35
 Identities = 22/54 (40%), Positives = 25/54 (46%), Gaps = 2/54 (3%)

Query: 60  LLQGAPDAMELRELTPWAGRPPGPRRRA--GPRRRRARARLGARPCGLRELEVR 111
           L +G    + LR     A  PP PRR A    R RR  ARL AR    R L+ R
Sbjct: 235 LFEGVVRQLRLRRRDSAAKEPPAPRRPASLAQRARRFLARLTARSARRRALKAR 288


>gi|115430237 spectrin, beta, non-erythrocytic 4 isoform sigma1 [Homo
            sapiens]
          Length = 2564

 Score = 30.8 bits (68), Expect = 0.78
 Identities = 25/55 (45%), Positives = 28/55 (50%), Gaps = 5/55 (9%)

Query: 54   LAQYRALLQGA-PDAMELRELTPWAGRPPGPRRRAGPR-RRRARARLGARPCGLR 106
            L Q R L  G  P+ +EL E TP   RP  PR R  P+ RRR R R G    G R
Sbjct: 2345 LPQPRELPPGRLPNGLELPERTP---RPDRPRARDRPKPRRRPRPREGGEGGGSR 2396


>gi|4506109 protamine 1 [Homo sapiens]
          Length = 51

 Score = 30.4 bits (67), Expect = 1.0
 Identities = 16/40 (40%), Positives = 21/40 (52%)

Query: 128 RYCAGACEAAARVYDLGLRRLRQRRRLRRERVRAQPCCRP 167
           RY     ++ +R Y    R  R+RRR  + R RA  CCRP
Sbjct: 3   RYRCCRSQSRSRYYRQRQRSRRRRRRSCQTRRRAMRCCRP 42


>gi|239741585 PREDICTED: hypothetical protein XP_002342243 [Homo
           sapiens]
          Length = 439

 Score = 30.0 bits (66), Expect = 1.3
 Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 10/72 (13%)

Query: 34  GPALVPLHRLPRTLDARIARLAQYRALLQGAPDAMELRELTPWAGRPPGPRRRAGPRRR- 92
           GP   P+ RLP       ++L     L + AP       LTP+    P PR  +  R R 
Sbjct: 173 GPWRAPVFRLPGARLRLSSQLPSPTTLPRAAP-------LTPYRPGSPSPRGHSRLRSRP 225

Query: 93  --RARARLGARP 102
             RA+ R+GA P
Sbjct: 226 PTRAQLRVGANP 237


>gi|22035558 transcription initiation factor IIIB isoform 3 [Homo
           sapiens]
          Length = 473

 Score = 30.0 bits (66), Expect = 1.3
 Identities = 13/25 (52%), Positives = 14/25 (56%)

Query: 57  YRALLQGAPDAMELRELTPWAGRPP 81
           YR LL GAP + E      W GRPP
Sbjct: 178 YRELLGGAPGSSEAAGSPEWGGRPP 202


>gi|22035556 transcription initiation factor IIIB isoform 1 [Homo
           sapiens]
          Length = 677

 Score = 30.0 bits (66), Expect = 1.3
 Identities = 13/25 (52%), Positives = 14/25 (56%)

Query: 57  YRALLQGAPDAMELRELTPWAGRPP 81
           YR LL GAP + E      W GRPP
Sbjct: 382 YRELLGGAPGSSEAAGSPEWGGRPP 406


>gi|102469037 jun D proto-oncogene [Homo sapiens]
          Length = 347

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 1/63 (1%)

Query: 53  RLAQYRALLQGAPDAMELRELTPWAGRPPGPRRRAGPRRRRARARLGARPCGLRELEVRV 112
           RLA  +   Q  PD     E  P +      + R    R+R R R+ A  C  R+LE R+
Sbjct: 235 RLAALKDEPQTVPDVPSFGESPPLSPIDMDTQERIKAERKRLRNRIAASKCRKRKLE-RI 293

Query: 113 SEL 115
           S L
Sbjct: 294 SRL 296


>gi|253735778 Rho/Rac guanine nucleotide exchange factor 2 isoform 2
           [Homo sapiens]
          Length = 985

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 13/56 (23%)

Query: 46  TLDARIARLAQYRALLQGAPDAMELRELT------------PWAGRPPGPRRRAGP 89
           +L+AR+    Q RALL+   +    R+L             PWA RP  PRRR+ P
Sbjct: 833 SLEARLRESEQARALLEREAEEAR-RQLAALGQTEPLPAEAPWARRPVDPRRRSLP 887


>gi|253735775 Rho/Rac guanine nucleotide exchange factor 2 isoform 1
           [Homo sapiens]
          Length = 986

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 13/56 (23%)

Query: 46  TLDARIARLAQYRALLQGAPDAMELRELT------------PWAGRPPGPRRRAGP 89
           +L+AR+    Q RALL+   +    R+L             PWA RP  PRRR+ P
Sbjct: 834 SLEARLRESEQARALLEREAEEAR-RQLAALGQTEPLPAEAPWARRPVDPRRRSLP 888


>gi|15011974 Rho/Rac guanine nucleotide exchange factor 2 isooform 3
           [Homo sapiens]
          Length = 958

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 13/56 (23%)

Query: 46  TLDARIARLAQYRALLQGAPDAMELRELT------------PWAGRPPGPRRRAGP 89
           +L+AR+    Q RALL+   +    R+L             PWA RP  PRRR+ P
Sbjct: 806 SLEARLRESEQARALLEREAEEAR-RQLAALGQTEPLPAEAPWARRPVDPRRRSLP 860


>gi|90903240 glutathione peroxidase 4 isoform C precursor [Homo
           sapiens]
          Length = 234

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 19/43 (44%), Positives = 22/43 (51%), Gaps = 3/43 (6%)

Query: 63  GAPDAMELRELTPWAGRPPGPRRRAGP--RRRRARARLGARPC 103
           G+P     R  +    RP  PRRR  P  RRRRAR R   +PC
Sbjct: 7   GSPGRRRQRCQSRGRRRPRAPRRRKAPACRRRRARRR-RKKPC 48


>gi|112807221 N-acetylgalactosaminyltransferase 12 [Homo sapiens]
          Length = 581

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 24/79 (30%), Positives = 30/79 (37%), Gaps = 1/79 (1%)

Query: 50  RIARLAQYRALLQGAPDAMELRELTPWAGRPPGPRRRAGPRRRRARARLGARPCGLRELE 109
           R  R A   A   G P         P   RPP P    G R    R +L      L+E  
Sbjct: 38  RAQRGAGAGAAEPGPPRTPRPGRREPVMPRPPVPANALGARGEAVRLQLQGEELRLQEES 97

Query: 110 VRVSELGLGYASDETVLFR 128
           VR+ ++ + Y SD   L R
Sbjct: 98  VRLHQINI-YLSDRISLHR 115


>gi|164663768 hypothetical protein LOC339263 [Homo sapiens]
          Length = 221

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 28/88 (31%), Positives = 33/88 (37%), Gaps = 17/88 (19%)

Query: 30  SHRLGPALVPLHRLPRTLDARIARLAQYRAL------LQGAPDAMELRELTPWAGR---- 79
           S R GPA       PR  D ++ R   +            AP A        WA R    
Sbjct: 5   SRRKGPA-------PRHADGKLGRTCDHPYAPWSFTPSSRAPTAWVRPPCPVWASRLQEH 57

Query: 80  PPGPRRRAGPRRRRARARLGARPCGLRE 107
            P PRR   P  RRA+A L A    LR+
Sbjct: 58  SPEPRRARAPPTRRAQAALYAPALRLRD 85


>gi|222446620 hypothetical protein LOC342346 [Homo sapiens]
          Length = 1141

 Score = 28.5 bits (62), Expect = 3.9
 Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 3/49 (6%)

Query: 35  PALVPLHRLPRTLD---ARIARLAQYRALLQGAPDAMELRELTPWAGRP 80
           P L P+ RL    D   +R+ +L    ALLQ  P   +L E +    RP
Sbjct: 69  PILNPMKRLSNVFDHVVSRLDKLENQLALLQDLPSTAQLLEASQGTARP 117


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.327    0.138    0.440 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,139,596
Number of Sequences: 37866
Number of extensions: 375060
Number of successful extensions: 2191
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 2125
Number of HSP's gapped (non-prelim): 81
length of query: 197
length of database: 18,247,518
effective HSP length: 97
effective length of query: 100
effective length of database: 14,574,516
effective search space: 1457451600
effective search space used: 1457451600
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.