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Search of human proteins with 4758612
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4758612 allograft inflammatory factor 1 isoform 2 [Homo
sapiens]
(132 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4758612 allograft inflammatory factor 1 isoform 2 [Homo sapiens] 277 2e-75
gi|14574568 allograft inflammatory factor 1 isoform 3 [Homo sapi... 109 7e-25
gi|14574566 allograft inflammatory factor 1 isoform 1 [Homo sapi... 109 7e-25
gi|13899241 ionized calcium binding adapter molecule 2 isoform 1... 85 1e-17
gi|20149675 EF-hand domain family, member D2 [Homo sapiens] 45 2e-05
gi|20149496 EF-hand domain family, member D1 [Homo sapiens] 44 4e-05
gi|195539372 ADAM metallopeptidase with thrombospondin type 1 mo... 33 0.065
gi|13376768 elongation factor RNA polymerase II-like 3 [Homo sap... 32 0.11
gi|218505835 membrane-associated guanylate kinase-related 3 iso... 31 0.25
gi|155969695 membrane-associated guanylate kinase-related 3 iso... 31 0.25
gi|4757902 caltractin [Homo sapiens] 31 0.32
gi|38093637 Nance-Horan syndrome protein isoform 1 [Homo sapiens] 31 0.32
gi|209862849 Nance-Horan syndrome protein isoform 2 [Homo sapiens] 31 0.32
gi|182507165 thymus expressed gene 3-like [Homo sapiens] 31 0.32
gi|4757974 centrin 1 [Homo sapiens] 30 0.42
gi|4885111 calmodulin-like 3 [Homo sapiens] 30 0.55
gi|134142824 forkhead box D2 [Homo sapiens] 30 0.55
gi|157419120 transmembrane protein 177 [Homo sapiens] 30 0.72
gi|157419116 transmembrane protein 177 [Homo sapiens] 30 0.72
gi|53831997 suppressor of cytokine signaling 7 [Homo sapiens] 30 0.72
gi|157419118 transmembrane protein 177 [Homo sapiens] 30 0.72
gi|239742468 PREDICTED: double homeobox, 4-like [Homo sapiens] 29 0.94
gi|32967514 neurofibromin 2 isoform 7 [Homo sapiens] 29 0.94
gi|32967254 neurofibromin 2 isoform 2 [Homo sapiens] 29 0.94
gi|32967266 neurofibromin 2 isoform 2 [Homo sapiens] 29 0.94
gi|32967264 neurofibromin 2 isoform 7 [Homo sapiens] 29 0.94
gi|32967262 neurofibromin 2 isoform 6 [Homo sapiens] 29 0.94
gi|32967260 neurofibromin 2 isoform 5 [Homo sapiens] 29 0.94
gi|32451486 neurofibromin 2 isoform 2 [Homo sapiens] 29 0.94
gi|4557795 neurofibromin 2 isoform 1 [Homo sapiens] 29 0.94
>gi|4758612 allograft inflammatory factor 1 isoform 2 [Homo sapiens]
Length = 132
Score = 277 bits (709), Expect = 2e-75
Identities = 132/132 (100%), Positives = 132/132 (100%)
Query: 1 MEFDLNGNGDIGEKRVICGGRVVCRPKKTEVSPTCSIPHDLGGGPPTTVGGRRMGMRKWE 60
MEFDLNGNGDIGEKRVICGGRVVCRPKKTEVSPTCSIPHDLGGGPPTTVGGRRMGMRKWE
Sbjct: 1 MEFDLNGNGDIGEKRVICGGRVVCRPKKTEVSPTCSIPHDLGGGPPTTVGGRRMGMRKWE 60
Query: 61 RRERVSPPSPHPHPLPPDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLR 120
RRERVSPPSPHPHPLPPDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLR
Sbjct: 61 RRERVSPPSPHPHPLPPDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLR 120
Query: 121 MMLGKRSAILKM 132
MMLGKRSAILKM
Sbjct: 121 MMLGKRSAILKM 132
>gi|14574568 allograft inflammatory factor 1 isoform 3 [Homo
sapiens]
Length = 147
Score = 109 bits (272), Expect = 7e-25
Identities = 55/55 (100%), Positives = 55/55 (100%)
Query: 78 DIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKRSAILKM 132
DIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKRSAILKM
Sbjct: 66 DIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKRSAILKM 120
Score = 27.7 bits (60), Expect = 2.7
Identities = 11/11 (100%), Positives = 11/11 (100%)
Query: 1 MEFDLNGNGDI 11
MEFDLNGNGDI
Sbjct: 55 MEFDLNGNGDI 65
>gi|14574566 allograft inflammatory factor 1 isoform 1 [Homo
sapiens]
Length = 93
Score = 109 bits (272), Expect = 7e-25
Identities = 55/55 (100%), Positives = 55/55 (100%)
Query: 78 DIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKRSAILKM 132
DIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKRSAILKM
Sbjct: 12 DIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKRSAILKM 66
Score = 27.7 bits (60), Expect = 2.7
Identities = 11/11 (100%), Positives = 11/11 (100%)
Query: 1 MEFDLNGNGDI 11
MEFDLNGNGDI
Sbjct: 1 MEFDLNGNGDI 11
>gi|13899241 ionized calcium binding adapter molecule 2 isoform 1
[Homo sapiens]
Length = 150
Score = 85.1 bits (209), Expect = 1e-17
Identities = 39/55 (70%), Positives = 48/55 (87%)
Query: 78 DIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKRSAILKM 132
D+MSLKRM+EKLGVPKTHLE+KK+I EV+ G +T SY DF+ MMLGKRSA+LK+
Sbjct: 68 DLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNMMLGKRSAVLKL 122
>gi|20149675 EF-hand domain family, member D2 [Homo sapiens]
Length = 240
Score = 44.7 bits (104), Expect = 2e-05
Identities = 21/42 (50%), Positives = 27/42 (64%)
Query: 78 DIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFL 119
D+M LK M+EKLG P+THL LK +I EV S+ +FL
Sbjct: 113 DLMELKLMMEKLGAPQTHLGLKNMIKEVDEDFDSKLSFREFL 154
>gi|20149496 EF-hand domain family, member D1 [Homo sapiens]
Length = 239
Score = 43.9 bits (102), Expect = 4e-05
Identities = 21/42 (50%), Positives = 27/42 (64%)
Query: 78 DIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFL 119
D+M LK M+EKLG P+THL LK +I EV S+ +FL
Sbjct: 111 DLMELKLMMEKLGAPQTHLGLKSMIKEVDEDFDGKLSFREFL 152
>gi|195539372 ADAM metallopeptidase with thrombospondin type 1
motif, 5 preproprotein [Homo sapiens]
Length = 930
Score = 33.1 bits (74), Expect = 0.065
Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Query: 31 VSPTCSIPHDLGGGPPTTVGGRRMGMRKWER-RERVSPPSPHPHPL 75
V P + D G PPT + R+ E +ER PP HPHPL
Sbjct: 20 VGPAATPAQDKAGQPPTAAAAAQPRRRQGEEVQERAEPPG-HPHPL 64
>gi|13376768 elongation factor RNA polymerase II-like 3 [Homo
sapiens]
Length = 397
Score = 32.3 bits (72), Expect = 0.11
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 20 GRVVCRPKKT--EVSPTCSIPHDLGGGPPTTVGGRRMGMRKWERRERVSPPSPHPHPLPP 77
G V +P+ EVS + + + G P G R M +WE R + P+ P P
Sbjct: 149 GDAVSQPQMALEEVSVSDPLASNQGQSLP---GSSREHMAQWEVRSQTHVPNREPVQALP 205
Query: 78 DIMSLKRMLEKLGVPKTHLELKK 100
S KR+ +K VP +EL++
Sbjct: 206 SSASRKRLDKKRSVPVATVELEE 228
>gi|218505835 membrane-associated guanylate kinase-related 3
isoform 1 [Homo sapiens]
Length = 1481
Score = 31.2 bits (69), Expect = 0.25
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
Query: 41 LGGGPPTTVGGRRMGMRKWERR---ERVSPPSPHPHPLPPDIMSLKRMLEKLGVPKTHLE 97
L GGPP+ +M K E E ++ P P P P PP I ++ KL + +L+
Sbjct: 653 LRGGPPSPTKTAKMKTDKKENAGSLEAINEPIPQPMPFPPSI--IRSGSPKLDPSEVYLK 710
Query: 98 LKKL 101
K L
Sbjct: 711 SKTL 714
>gi|155969695 membrane-associated guanylate kinase-related 3
isoform 2 [Homo sapiens]
Length = 1125
Score = 31.2 bits (69), Expect = 0.25
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
Query: 41 LGGGPPTTVGGRRMGMRKWERR---ERVSPPSPHPHPLPPDIMSLKRMLEKLGVPKTHLE 97
L GGPP+ +M K E E ++ P P P P PP I ++ KL + +L+
Sbjct: 653 LRGGPPSPTKTAKMKTDKKENAGSLEAINEPIPQPMPFPPSI--IRSGSPKLDPSEVYLK 710
Query: 98 LKKL 101
K L
Sbjct: 711 SKTL 714
>gi|4757902 caltractin [Homo sapiens]
Length = 172
Score = 30.8 bits (68), Expect = 0.32
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 78 DIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKRS 127
D+ LK + LG E+KK+I E+ ++ DFL +M K S
Sbjct: 49 DVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMS 98
Score = 27.7 bits (60), Expect = 2.7
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 81 SLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMM 122
+LKR+ ++LG T EL+++I E S +FLR+M
Sbjct: 125 NLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIM 166
>gi|38093637 Nance-Horan syndrome protein isoform 1 [Homo sapiens]
Length = 1630
Score = 30.8 bits (68), Expect = 0.32
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 6/70 (8%)
Query: 32 SPTCSIPHDLGGGPPTTVGGRRMGMRKWERRERVSPPSPHPHPLPPDIMSLKRMLEKLGV 91
+PT S P GP + GG + + ER+ + PS L +SL + LE +
Sbjct: 1010 TPTSSFPTAFFSGP-LSPGGSKRKPKVPERKSSLQQPS-----LKDGTISLSKDLELPII 1063
Query: 92 PKTHLELKKL 101
P THL+L L
Sbjct: 1064 PPTHLDLSAL 1073
>gi|209862849 Nance-Horan syndrome protein isoform 2 [Homo sapiens]
Length = 1474
Score = 30.8 bits (68), Expect = 0.32
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 6/70 (8%)
Query: 32 SPTCSIPHDLGGGPPTTVGGRRMGMRKWERRERVSPPSPHPHPLPPDIMSLKRMLEKLGV 91
+PT S P GP + GG + + ER+ + PS L +SL + LE +
Sbjct: 854 TPTSSFPTAFFSGP-LSPGGSKRKPKVPERKSSLQQPS-----LKDGTISLSKDLELPII 907
Query: 92 PKTHLELKKL 101
P THL+L L
Sbjct: 908 PPTHLDLSAL 917
>gi|182507165 thymus expressed gene 3-like [Homo sapiens]
Length = 629
Score = 30.8 bits (68), Expect = 0.32
Identities = 26/106 (24%), Positives = 38/106 (35%), Gaps = 9/106 (8%)
Query: 7 GNGDIGEKRVICGGRVVCRPKKTEVSPTCSIP------HDLGGGPPTTVGGRRMGMRKWE 60
G D G +R V RP SP + P +GG P + R WE
Sbjct: 273 GGADGGPRRQ---NSVRQRPPDASPSPGSARPAREPSLERVGGHPTSPAALSRAWASSWE 329
Query: 61 RRERVSPPSPHPHPLPPDIMSLKRMLEKLGVPKTHLELKKLIGEVS 106
P +P P PPD + R+++ +P + L G +
Sbjct: 330 SEAAPEPAAPPAAPSPPDSPAEGRLVKAQYIPGAQAATRGLPGRAA 375
>gi|4757974 centrin 1 [Homo sapiens]
Length = 172
Score = 30.4 bits (67), Expect = 0.42
Identities = 18/50 (36%), Positives = 23/50 (46%)
Query: 78 DIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKRS 127
D LK + LG E+KK+I EV S+ DFL +M K S
Sbjct: 49 DAKELKVAMRALGFEPRKEEMKKMISEVDREGTGKISFNDFLAVMTQKMS 98
Score = 26.2 bits (56), Expect = 8.0
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 81 SLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMM 122
+LKR+ +LG T EL+++I E + +FLR+M
Sbjct: 125 NLKRVANELGENLTDEELQEMIDEADRDGDGEVNEEEFLRIM 166
>gi|4885111 calmodulin-like 3 [Homo sapiens]
Length = 149
Score = 30.0 bits (66), Expect = 0.55
Identities = 14/44 (31%), Positives = 22/44 (50%)
Query: 82 LKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGK 125
L ++ LG T EL+ ++ E+ T +P+FL MM K
Sbjct: 33 LGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVDFPEFLGMMARK 76
>gi|134142824 forkhead box D2 [Homo sapiens]
Length = 495
Score = 30.0 bits (66), Expect = 0.55
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 51 GRRMGMRKWERRERVSPPSPHPHPLP 76
G + RK +R+ + PP PHPHP P
Sbjct: 214 GSFLRRRKRFKRQPLPPPHPHPHPHP 239
Score = 27.3 bits (59), Expect = 3.6
Identities = 17/55 (30%), Positives = 23/55 (41%)
Query: 56 MRKWERRERVSPPSPHPHPLPPDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSG 110
+R+ +R +R P PHPHP P + L+ G P L G G G
Sbjct: 217 LRRRKRFKRQPLPPPHPHPHPHPELLLRGGAAAAGDPGAFLPGFAAYGAYGYGYG 271
>gi|157419120 transmembrane protein 177 [Homo sapiens]
Length = 311
Score = 29.6 bits (65), Expect = 0.72
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Query: 68 PSPHPHPLPPDIMSL-KRMLEKLGVPKTH 95
P P PLPP + SL + +L+ +GVP H
Sbjct: 50 PQGQPAPLPPQLQSLFQEVLQDIGVPSGH 78
>gi|157419116 transmembrane protein 177 [Homo sapiens]
Length = 311
Score = 29.6 bits (65), Expect = 0.72
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Query: 68 PSPHPHPLPPDIMSL-KRMLEKLGVPKTH 95
P P PLPP + SL + +L+ +GVP H
Sbjct: 50 PQGQPAPLPPQLQSLFQEVLQDIGVPSGH 78
>gi|53831997 suppressor of cytokine signaling 7 [Homo sapiens]
Length = 581
Score = 29.6 bits (65), Expect = 0.72
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 19 GGRVVCRPKKTEVSPTCSIPHDLGGGPPTTVGGRRMGMRKWERRERVSPPSPHPHPLPP 77
GGR++ +P E+ P +P L P +G G ++ +++++ PP P P PL P
Sbjct: 147 GGRLLLQPPGPELPP---VPFPLQDLVP--LGRLSRGEQQQQQQQQPPPPPPPPGPLRP 200
>gi|157419118 transmembrane protein 177 [Homo sapiens]
Length = 311
Score = 29.6 bits (65), Expect = 0.72
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Query: 68 PSPHPHPLPPDIMSL-KRMLEKLGVPKTH 95
P P PLPP + SL + +L+ +GVP H
Sbjct: 50 PQGQPAPLPPQLQSLFQEVLQDIGVPSGH 78
>gi|239742468 PREDICTED: double homeobox, 4-like [Homo sapiens]
Length = 485
Score = 29.3 bits (64), Expect = 0.94
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 11/56 (19%)
Query: 45 PPTTVG--------GRRMGMRKWERRERVSPPSPHPHPLPPDIMSLKRMLEKLGVP 92
PPT+ G G ++ WE + +PP P P PPD + R + G+P
Sbjct: 362 PPTSQGSPWWGWGRGPQVAGAAWEPQAGAAPP---PQPAPPDASASARQGQMQGIP 414
>gi|32967514 neurofibromin 2 isoform 7 [Homo sapiens]
Length = 507
Score = 29.3 bits (64), Expect = 0.94
Identities = 17/59 (28%), Positives = 26/59 (44%)
Query: 67 PPSPHPHPLPPDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGK 125
P +P P PLPPDI S + + L ++K+L E+ E L+ L +
Sbjct: 400 PMNPIPAPLPPDIPSFNLIGDSLSFDFKDTDMKRLSMEIEKEKVEYMEKSKHLQEQLNE 458
>gi|32967254 neurofibromin 2 isoform 2 [Homo sapiens]
Length = 590
Score = 29.3 bits (64), Expect = 0.94
Identities = 17/59 (28%), Positives = 26/59 (44%)
Query: 67 PPSPHPHPLPPDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGK 125
P +P P PLPPDI S + + L ++K+L E+ E L+ L +
Sbjct: 483 PMNPIPAPLPPDIPSFNLIGDSLSFDFKDTDMKRLSMEIEKEKVEYMEKSKHLQEQLNE 541
>gi|32967266 neurofibromin 2 isoform 2 [Homo sapiens]
Length = 590
Score = 29.3 bits (64), Expect = 0.94
Identities = 17/59 (28%), Positives = 26/59 (44%)
Query: 67 PPSPHPHPLPPDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGK 125
P +P P PLPPDI S + + L ++K+L E+ E L+ L +
Sbjct: 483 PMNPIPAPLPPDIPSFNLIGDSLSFDFKDTDMKRLSMEIEKEKVEYMEKSKHLQEQLNE 541
>gi|32967264 neurofibromin 2 isoform 7 [Homo sapiens]
Length = 507
Score = 29.3 bits (64), Expect = 0.94
Identities = 17/59 (28%), Positives = 26/59 (44%)
Query: 67 PPSPHPHPLPPDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGK 125
P +P P PLPPDI S + + L ++K+L E+ E L+ L +
Sbjct: 400 PMNPIPAPLPPDIPSFNLIGDSLSFDFKDTDMKRLSMEIEKEKVEYMEKSKHLQEQLNE 458
>gi|32967262 neurofibromin 2 isoform 6 [Homo sapiens]
Length = 549
Score = 29.3 bits (64), Expect = 0.94
Identities = 17/59 (28%), Positives = 26/59 (44%)
Query: 67 PPSPHPHPLPPDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGK 125
P +P P PLPPDI S + + L ++K+L E+ E L+ L +
Sbjct: 442 PMNPIPAPLPPDIPSFNLIGDSLSFDFKDTDMKRLSMEIEKEKVEYMEKSKHLQEQLNE 500
>gi|32967260 neurofibromin 2 isoform 5 [Homo sapiens]
Length = 548
Score = 29.3 bits (64), Expect = 0.94
Identities = 17/59 (28%), Positives = 26/59 (44%)
Query: 67 PPSPHPHPLPPDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGK 125
P +P P PLPPDI S + + L ++K+L E+ E L+ L +
Sbjct: 441 PMNPIPAPLPPDIPSFNLIGDSLSFDFKDTDMKRLSMEIEKEKVEYMEKSKHLQEQLNE 499
>gi|32451486 neurofibromin 2 isoform 2 [Homo sapiens]
Length = 590
Score = 29.3 bits (64), Expect = 0.94
Identities = 17/59 (28%), Positives = 26/59 (44%)
Query: 67 PPSPHPHPLPPDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGK 125
P +P P PLPPDI S + + L ++K+L E+ E L+ L +
Sbjct: 483 PMNPIPAPLPPDIPSFNLIGDSLSFDFKDTDMKRLSMEIEKEKVEYMEKSKHLQEQLNE 541
>gi|4557795 neurofibromin 2 isoform 1 [Homo sapiens]
Length = 595
Score = 29.3 bits (64), Expect = 0.94
Identities = 17/59 (28%), Positives = 26/59 (44%)
Query: 67 PPSPHPHPLPPDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGK 125
P +P P PLPPDI S + + L ++K+L E+ E L+ L +
Sbjct: 483 PMNPIPAPLPPDIPSFNLIGDSLSFDFKDTDMKRLSMEIEKEKVEYMEKSKHLQEQLNE 541
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.140 0.435
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,729,444
Number of Sequences: 37866
Number of extensions: 394105
Number of successful extensions: 2352
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 59
Number of HSP's that attempted gapping in prelim test: 2271
Number of HSP's gapped (non-prelim): 134
length of query: 132
length of database: 18,247,518
effective HSP length: 91
effective length of query: 41
effective length of database: 14,801,712
effective search space: 606870192
effective search space used: 606870192
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.