Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Search of human proteins with 4758272

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4758272 endosulfine alpha isoform 3 [Homo sapiens]
         (121 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4758272 endosulfine alpha isoform 3 [Homo sapiens]                 245   7e-66
gi|46389554 endosulfine alpha isoform 4 [Homo sapiens]                237   1e-63
gi|46389550 endosulfine alpha isoform 1 [Homo sapiens]                234   9e-63
gi|46389552 endosulfine alpha isoform 2 [Homo sapiens]                227   2e-60
gi|46389558 endosulfine alpha isoform 6 [Homo sapiens]                208   7e-55
gi|46389560 endosulfine alpha isoform 7 [Homo sapiens]                201   1e-52
gi|46389556 endosulfine alpha isoform 5 [Homo sapiens]                198   9e-52
gi|5729732 cyclic AMP phosphoprotein, 19 kD [Homo sapiens]            168   8e-43
gi|169163530 PREDICTED: similar to endosulfine alpha [Homo sapiens]   144   1e-35
gi|169164492 PREDICTED: similar to hCG2040272 [Homo sapiens]          143   3e-35
gi|169164903 PREDICTED: similar to hCG2040272 [Homo sapiens]          143   3e-35
gi|46389562 endosulfine alpha isoform 8 [Homo sapiens]                124   1e-29
gi|7657465 podocalyxin-like 2 [Homo sapiens]                           35   0.013
gi|58761548 tau tubulin kinase 1 [Homo sapiens]                        34   0.023
gi|157785645 SPEG complex locus [Homo sapiens]                         33   0.051
gi|157738619 smoothelin-like 1 [Homo sapiens]                          33   0.051
gi|194097392 Golgi autoantigen, golgin subfamily a, 2 [Homo sapi...    32   0.087
gi|4759128 solute carrier family 24 (sodium/potassium/calcium ex...    32   0.087
gi|111955162 5-azacytidine induced 1 isoform b [Homo sapiens]          32   0.087
gi|111955084 5-azacytidine induced 1 isoform a [Homo sapiens]          32   0.087
gi|224458301 family with sequence similarity 186, member A [Homo...    32   0.11 
gi|71044479 death inducer-obliterator 1 isoform c [Homo sapiens]       32   0.15 
gi|71044477 death inducer-obliterator 1 isoform b [Homo sapiens]       32   0.15 
gi|18375619 death inducer-obliterator 1 isoform a [Homo sapiens]       32   0.15 
gi|18375617 death inducer-obliterator 1 isoform a [Homo sapiens]       32   0.15 
gi|21071077 dishevelled-associated activator of morphogenesis 1 ...    32   0.15 
gi|211904182 DDB1 and CUL4 associated factor 8-like 2 [Homo sapi...    31   0.19 
gi|48255883 troponin T type 2, cardiac isoform 4 [Homo sapiens]        31   0.19 
gi|112789536 troponin T3, skeletal, fast isoform 3 [Homo sapiens]      31   0.19 
gi|112789541 troponin T3, skeletal, fast isoform 4 [Homo sapiens]      31   0.19 

>gi|4758272 endosulfine alpha isoform 3 [Homo sapiens]
          Length = 121

 Score =  245 bits (625), Expect = 7e-66
 Identities = 121/121 (100%), Positives = 121/121 (100%)

Query: 1   MSQKQEEENPAEETGEEKQDTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQK 60
           MSQKQEEENPAEETGEEKQDTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQK
Sbjct: 1   MSQKQEEENPAEETGEEKQDTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQK 60

Query: 61  GQKYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLAGGQV 120
           GQKYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLAGGQV
Sbjct: 61  GQKYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLAGGQV 120

Query: 121 E 121
           E
Sbjct: 121 E 121


>gi|46389554 endosulfine alpha isoform 4 [Homo sapiens]
          Length = 117

 Score =  237 bits (605), Expect = 1e-63
 Identities = 117/117 (100%), Positives = 117/117 (100%)

Query: 1   MSQKQEEENPAEETGEEKQDTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQK 60
           MSQKQEEENPAEETGEEKQDTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQK
Sbjct: 1   MSQKQEEENPAEETGEEKQDTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQK 60

Query: 61  GQKYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLAG 117
           GQKYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLAG
Sbjct: 61  GQKYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLAG 117


>gi|46389550 endosulfine alpha isoform 1 [Homo sapiens]
          Length = 137

 Score =  234 bits (598), Expect = 9e-63
 Identities = 121/137 (88%), Positives = 121/137 (88%), Gaps = 16/137 (11%)

Query: 1   MSQKQEEENPAEETGEEKQDTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQK 60
           MSQKQEEENPAEETGEEKQDTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQK
Sbjct: 1   MSQKQEEENPAEETGEEKQDTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQK 60

Query: 61  G----------------QKYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLP 104
           G                QKYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLP
Sbjct: 61  GDYKSLHWSVLLCADEMQKYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLP 120

Query: 105 QRKSSLVTSKLAGGQVE 121
           QRKSSLVTSKLAGGQVE
Sbjct: 121 QRKSSLVTSKLAGGQVE 137


>gi|46389552 endosulfine alpha isoform 2 [Homo sapiens]
          Length = 133

 Score =  227 bits (578), Expect = 2e-60
 Identities = 117/133 (87%), Positives = 117/133 (87%), Gaps = 16/133 (12%)

Query: 1   MSQKQEEENPAEETGEEKQDTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQK 60
           MSQKQEEENPAEETGEEKQDTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQK
Sbjct: 1   MSQKQEEENPAEETGEEKQDTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQK 60

Query: 61  G----------------QKYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLP 104
           G                QKYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLP
Sbjct: 61  GDYKSLHWSVLLCADEMQKYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLP 120

Query: 105 QRKSSLVTSKLAG 117
           QRKSSLVTSKLAG
Sbjct: 121 QRKSSLVTSKLAG 133


>gi|46389558 endosulfine alpha isoform 6 [Homo sapiens]
          Length = 117

 Score =  208 bits (530), Expect = 7e-55
 Identities = 102/103 (99%), Positives = 103/103 (100%)

Query: 19  QDTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQKGQKYFDSGDYNMAKAKMK 78
           +DTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQKGQKYFDSGDYNMAKAKMK
Sbjct: 15  EDTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQKGQKYFDSGDYNMAKAKMK 74

Query: 79  NKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLAGGQVE 121
           NKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLAGGQVE
Sbjct: 75  NKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLAGGQVE 117


>gi|46389560 endosulfine alpha isoform 7 [Homo sapiens]
          Length = 113

 Score =  201 bits (510), Expect = 1e-52
 Identities = 98/99 (98%), Positives = 99/99 (100%)

Query: 19  QDTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQKGQKYFDSGDYNMAKAKMK 78
           +DTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQKGQKYFDSGDYNMAKAKMK
Sbjct: 15  EDTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQKGQKYFDSGDYNMAKAKMK 74

Query: 79  NKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLAG 117
           NKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLAG
Sbjct: 75  NKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLAG 113


>gi|46389556 endosulfine alpha isoform 5 [Homo sapiens]
          Length = 133

 Score =  198 bits (503), Expect = 9e-52
 Identities = 102/119 (85%), Positives = 103/119 (86%), Gaps = 16/119 (13%)

Query: 19  QDTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQKG----------------Q 62
           +DTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQKG                Q
Sbjct: 15  EDTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQKGDYKSLHWSVLLCADEMQ 74

Query: 63  KYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLAGGQVE 121
           KYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLAGGQVE
Sbjct: 75  KYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLAGGQVE 133


>gi|5729732 cyclic AMP phosphoprotein, 19 kD [Homo sapiens]
          Length = 112

 Score =  168 bits (426), Expect = 8e-43
 Identities = 84/110 (76%), Positives = 93/110 (84%), Gaps = 1/110 (0%)

Query: 8   ENPAEETGEEKQDTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQKGQKYFDS 67
           E P   + EE+++ ++K    PE+AEEAKLKA+YP LGQKPGGSDFL KRLQKGQKYFDS
Sbjct: 4   EVPEAASAEEQKEMEDKV-TSPEKAEEAKLKARYPHLGQKPGGSDFLRKRLQKGQKYFDS 62

Query: 68  GDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLAG 117
           GDYNMAKAKMKNKQLP+A PDK  VTGDHIPTPQDLPQRK SLV SKLAG
Sbjct: 63  GDYNMAKAKMKNKQLPTAAPDKTEVTGDHIPTPQDLPQRKPSLVASKLAG 112


>gi|169163530 PREDICTED: similar to endosulfine alpha [Homo sapiens]
          Length = 164

 Score =  144 bits (364), Expect = 1e-35
 Identities = 77/109 (70%), Positives = 88/109 (80%), Gaps = 8/109 (7%)

Query: 12  EETGEEKQDT---QEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQKGQKYFDSG 68
           E  GE++Q     Q+KEGIL ER EE KLK+KY SLGQ+PGGS+FLMKRLQKG++YF SG
Sbjct: 61  EPCGEDQQGETKMQDKEGILSERVEEPKLKSKYLSLGQEPGGSNFLMKRLQKGKRYFVSG 120

Query: 69  DYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLAG 117
           DYNMAKAKMK+KQLPSA P KNLVTGDHI     LP RKS ++TSKLAG
Sbjct: 121 DYNMAKAKMKSKQLPSAEPKKNLVTGDHI-----LPHRKSLVITSKLAG 164


>gi|169164492 PREDICTED: similar to hCG2040272 [Homo sapiens]
          Length = 164

 Score =  143 bits (361), Expect = 3e-35
 Identities = 76/109 (69%), Positives = 88/109 (80%), Gaps = 8/109 (7%)

Query: 12  EETGEEKQDT---QEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQKGQKYFDSG 68
           E  GE++Q     Q+KEGIL ER EE KLK+KY +LGQ+PGGS+FLMKRLQKG++YF SG
Sbjct: 61  EPCGEDQQGETKMQDKEGILSERVEEPKLKSKYLNLGQEPGGSNFLMKRLQKGKRYFVSG 120

Query: 69  DYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLAG 117
           DYNMAKAKMK+KQLPSA P KNLVTGDHI     LP RKS ++TSKLAG
Sbjct: 121 DYNMAKAKMKSKQLPSAEPKKNLVTGDHI-----LPHRKSLVITSKLAG 164


>gi|169164903 PREDICTED: similar to hCG2040272 [Homo sapiens]
          Length = 164

 Score =  143 bits (361), Expect = 3e-35
 Identities = 76/109 (69%), Positives = 88/109 (80%), Gaps = 8/109 (7%)

Query: 12  EETGEEKQDT---QEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQKGQKYFDSG 68
           E  GE++Q     Q+KEGIL ER EE KLK+KY +LGQ+PGGS+FLMKRLQKG++YF SG
Sbjct: 61  EPCGEDQQGETKMQDKEGILSERVEEPKLKSKYLNLGQEPGGSNFLMKRLQKGKRYFVSG 120

Query: 69  DYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLAG 117
           DYNMAKAKMK+KQLPSA P KNLVTGDHI     LP RKS ++TSKLAG
Sbjct: 121 DYNMAKAKMKSKQLPSAEPKKNLVTGDHI-----LPHRKSLVITSKLAG 164


>gi|46389562 endosulfine alpha isoform 8 [Homo sapiens]
          Length = 105

 Score =  124 bits (312), Expect = 1e-29
 Identities = 61/61 (100%), Positives = 61/61 (100%)

Query: 1  MSQKQEEENPAEETGEEKQDTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQK 60
          MSQKQEEENPAEETGEEKQDTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQK
Sbjct: 1  MSQKQEEENPAEETGEEKQDTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQK 60

Query: 61 G 61
          G
Sbjct: 61 G 61


>gi|7657465 podocalyxin-like 2 [Homo sapiens]
          Length = 605

 Score = 35.0 bits (79), Expect = 0.013
 Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 20/110 (18%)

Query: 3   QKQEEENPAEETGEEKQDTQEKEGILPERA--EEAKLKAKYPSL---GQKPGGSDFLMKR 57
           +++EEE   E+   EKQ+ +E+E +LP     EEAK + +  SL    Q PG +      
Sbjct: 165 EEEEEEEEREKEEVEKQEEEEEEELLPVNGSQEEAKPQVRDFSLTSSSQTPGATK----- 219

Query: 58  LQKGQKYFDSGDYNMAKAKMKNKQ-----LPSAGPDKNLVTGDHIPTPQD 102
                ++ DSGD   +  ++++       LPS  P   +  GD   T Q+
Sbjct: 220 ----SRHEDSGDQASSGVEVESSMGPSLLLPSVTP-TTVTPGDQDSTSQE 264


>gi|58761548 tau tubulin kinase 1 [Homo sapiens]
          Length = 1321

 Score = 34.3 bits (77), Expect = 0.023
 Identities = 36/120 (30%), Positives = 54/120 (45%), Gaps = 14/120 (11%)

Query: 4   KQEEENPAEETGEEKQDTQEKEGILPERAEEAKLKAKYPSLGQKPG----GSDFLMKRLQ 59
           ++EEE   EE  EE+++ +E+E    E  E A   A    LG + G    GS+    R Q
Sbjct: 742 EEEEEEDEEEEEEEEEEEEEEEEEEEEEEEAAAAVALGEVLGPRSGSSSEGSERSTDRSQ 801

Query: 60  KGQK---YFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLA 116
           +G       D    +  +A M +  L      K LV    + +P D+   K S VT++LA
Sbjct: 802 EGAPSTLLADDQKESRGRASMADGDLEPEEGSKTLV----LVSPGDM---KKSPVTAELA 854


>gi|157785645 SPEG complex locus [Homo sapiens]
          Length = 3267

 Score = 33.1 bits (74), Expect = 0.051
 Identities = 33/116 (28%), Positives = 49/116 (42%), Gaps = 17/116 (14%)

Query: 5    QEEENPAEETGEEKQDTQEKEGILPERAEEAKLKAKYPSLGQKP-GGSDFLMKRLQKGQK 63
            ++E     ETG       +++G  P + +EA      PS GQ+P  G+      L++G  
Sbjct: 1956 EDEALGTPETGAATPMDWQEQGRAPSQDQEAPSPEALPSPGQEPAAGASPRRGELRRGSS 2015

Query: 64   YFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTPQDLPQRKS-SLVTSKLAGG 118
                              LP AGP + L  G H     +LPQR+S S   ++LA G
Sbjct: 2016 --------------AESALPRAGP-RELGRGLHKAASVELPQRRSPSPGATRLARG 2056


>gi|157738619 smoothelin-like 1 [Homo sapiens]
          Length = 512

 Score = 33.1 bits (74), Expect = 0.051
 Identities = 17/48 (35%), Positives = 24/48 (50%)

Query: 5   QEEENPAEETGEEKQDTQEKEGILPERAEEAKLKAKYPSLGQKPGGSD 52
           QE     EET  E ++ +EKE  L    ++A+ K   P  GQK   +D
Sbjct: 127 QEMTGRKEETKSEPKEAEEKESTLASEKQKAEEKEAKPESGQKADAND 174


>gi|194097392 Golgi autoantigen, golgin subfamily a, 2 [Homo
           sapiens]
          Length = 1002

 Score = 32.3 bits (72), Expect = 0.087
 Identities = 32/130 (24%), Positives = 54/130 (41%), Gaps = 23/130 (17%)

Query: 4   KQEEENPAEETGEEKQDTQEKEGILPER------------AEEAKLKAKYP----SLGQK 47
           KQ+ +   ++  EEK++  +K+G L E+            +E+A+L+        +  QK
Sbjct: 188 KQQNQEITDQLEEEKKECHQKQGALREQLQVHIQTIGILVSEKAELQTALAHTQHAARQK 247

Query: 48  PGGSDFLMKRLQKG-------QKYFDSGDYNMAKAKMKNKQLPSAGPDKNLVTGDHIPTP 100
            G S+ L  RLQ         ++   +      KA   NK+L        L    +  + 
Sbjct: 248 EGESEDLASRLQYSRRRVGELERALSAVSTQQKKADRYNKELTKERDALRLELYKNTQSN 307

Query: 101 QDLPQRKSSL 110
           +DL Q KS L
Sbjct: 308 EDLKQEKSEL 317


>gi|4759128 solute carrier family 24 (sodium/potassium/calcium
           exchanger), member 1 [Homo sapiens]
          Length = 1099

 Score = 32.3 bits (72), Expect = 0.087
 Identities = 17/53 (32%), Positives = 28/53 (52%)

Query: 3   QKQEEENPAEETGEEKQDTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLM 55
           +++EEE   EE  EE+++ +E+E    E+  E  L   +P   QK     FL+
Sbjct: 863 EEEEEEQEEEEEEEEQEEEEEEEEEEEEKGNEEPLSLDWPETRQKQAIYLFLL 915


>gi|111955162 5-azacytidine induced 1 isoform b [Homo sapiens]
          Length = 1044

 Score = 32.3 bits (72), Expect = 0.087
 Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 8/119 (6%)

Query: 3   QKQEEENPAEETGEEKQDTQEKEGILPERAEEAKL-KAKYPSLGQKPGGSDFLMKRLQKG 61
           +K  EE   +      Q+ Q+K  +  ++A  A+    + P   + PG     M++  + 
Sbjct: 325 RKAREEKARQARRAAIQELQQKRALRAQKASTAERGPPENPRETRVPG-----MRQPAQE 379

Query: 62  QKYFDSGDYNMA-KAKMKNKQLPSAGP-DKNLVTGDHIPTPQDLPQRKSSLVTSKLAGG 118
                 G  + A KA      LP+AGP D+ L T D  P PQ  P+ ++  V ++ A G
Sbjct: 380 LSPTPGGTAHQALKANNTGGGLPAAGPGDRCLPTSDSSPEPQQPPEDRTQDVLAQDAAG 438


>gi|111955084 5-azacytidine induced 1 isoform a [Homo sapiens]
          Length = 1080

 Score = 32.3 bits (72), Expect = 0.087
 Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 8/119 (6%)

Query: 3   QKQEEENPAEETGEEKQDTQEKEGILPERAEEAKL-KAKYPSLGQKPGGSDFLMKRLQKG 61
           +K  EE   +      Q+ Q+K  +  ++A  A+    + P   + PG     M++  + 
Sbjct: 325 RKAREEKARQARRAAIQELQQKRALRAQKASTAERGPPENPRETRVPG-----MRQPAQE 379

Query: 62  QKYFDSGDYNMA-KAKMKNKQLPSAGP-DKNLVTGDHIPTPQDLPQRKSSLVTSKLAGG 118
                 G  + A KA      LP+AGP D+ L T D  P PQ  P+ ++  V ++ A G
Sbjct: 380 LSPTPGGTAHQALKANNTGGGLPAAGPGDRCLPTSDSSPEPQQPPEDRTQDVLAQDAAG 438


>gi|224458301 family with sequence similarity 186, member A [Homo
            sapiens]
          Length = 2351

 Score = 32.0 bits (71), Expect = 0.11
 Identities = 34/117 (29%), Positives = 53/117 (45%), Gaps = 15/117 (12%)

Query: 3    QKQEEENPAEETGEEKQDTQEKEGILP----ERAEEAKLKAKYPS-LGQKPGGSDFLMKR 57
            QKQ     AE+  ++KQ  QE+E  LP    +R EE   K K    L +K  G    M++
Sbjct: 893  QKQATPKQAEQEEKQKQRGQEEEE-LPKSSLQRLEEGTQKMKTQGLLLEKENGQ---MRQ 948

Query: 58   LQKGQKYFDSGDYNMAKAKMKNKQLPSAG---PDKNLVTGDHIPTPQDLPQRKSSLV 111
            +QK  K+      +  + K K KQ P  G    ++ + T D +   +  P+    +V
Sbjct: 949  IQKEAKHLGP---HRRREKGKEKQKPERGLEDLERQIKTKDQMQMKETQPKELEKMV 1002


>gi|71044479 death inducer-obliterator 1 isoform c [Homo sapiens]
          Length = 2240

 Score = 31.6 bits (70), Expect = 0.15
 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 2/33 (6%)

Query: 1   MSQKQEEENPAEETGEEKQDTQEKEGILPERAE 33
           + +K+ EE PAE  G E  DT   EG+LP + E
Sbjct: 188 LRKKRREEGPAETVGSEASDT--VEGVLPSKQE 218


>gi|71044477 death inducer-obliterator 1 isoform b [Homo sapiens]
          Length = 1189

 Score = 31.6 bits (70), Expect = 0.15
 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 2/33 (6%)

Query: 1   MSQKQEEENPAEETGEEKQDTQEKEGILPERAE 33
           + +K+ EE PAE  G E  DT   EG+LP + E
Sbjct: 188 LRKKRREEGPAETVGSEASDT--VEGVLPSKQE 218


>gi|18375619 death inducer-obliterator 1 isoform a [Homo sapiens]
          Length = 562

 Score = 31.6 bits (70), Expect = 0.15
 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 2/33 (6%)

Query: 1   MSQKQEEENPAEETGEEKQDTQEKEGILPERAE 33
           + +K+ EE PAE  G E  DT   EG+LP + E
Sbjct: 188 LRKKRREEGPAETVGSEASDT--VEGVLPSKQE 218


>gi|18375617 death inducer-obliterator 1 isoform a [Homo sapiens]
          Length = 562

 Score = 31.6 bits (70), Expect = 0.15
 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 2/33 (6%)

Query: 1   MSQKQEEENPAEETGEEKQDTQEKEGILPERAE 33
           + +K+ EE PAE  G E  DT   EG+LP + E
Sbjct: 188 LRKKRREEGPAETVGSEASDT--VEGVLPSKQE 218


>gi|21071077 dishevelled-associated activator of morphogenesis 1 [Homo
            sapiens]
          Length = 1078

 Score = 31.6 bits (70), Expect = 0.15
 Identities = 21/87 (24%), Positives = 44/87 (50%), Gaps = 5/87 (5%)

Query: 4    KQEEENPAEETGEEKQDTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQKGQK 63
            KQE EN  ++  EE++  + +  +  +R  E K++ K     ++ G  D L+  L+ G+ 
Sbjct: 987  KQENENMRKKKEEEERRARMEAQLKEQRERERKMR-KAKENSEESGEFDDLVSALRSGEV 1045

Query: 64   YFDSGDYNMAKAKMKNKQLPSAGPDKN 90
            +    D +++K K   K++ +   D +
Sbjct: 1046 F----DKDLSKLKRNRKRITNQMTDSS 1068


>gi|211904182 DDB1 and CUL4 associated factor 8-like 2 [Homo
           sapiens]
          Length = 631

 Score = 31.2 bits (69), Expect = 0.19
 Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 3/60 (5%)

Query: 3   QKQEEENPAEETGEEKQDTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQKGQ 62
           +++E+E   EE GEE+++ +E+E    E  EE + + + P  G +  G +     L++ Q
Sbjct: 113 REEEDEEIQEEGGEEEEEEEEEE---EEEEEEEEEEEEQPRAGPQGSGGNHEQYSLEEDQ 169


>gi|48255883 troponin T type 2, cardiac isoform 4 [Homo sapiens]
          Length = 282

 Score = 31.2 bits (69), Expect = 0.19
 Identities = 17/52 (32%), Positives = 25/52 (48%)

Query: 3  QKQEEENPAEETGEEKQDTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFL 54
          +++E+E  AEE  E + +T+E      E  EEAK     P    KP    F+
Sbjct: 15 EQEEQEEAAEEDAEAEAETEETRAEEDEEEEEAKEAEDGPMEESKPKPRSFM 66


>gi|112789536 troponin T3, skeletal, fast isoform 3 [Homo sapiens]
          Length = 250

 Score = 31.2 bits (69), Expect = 0.19
 Identities = 19/55 (34%), Positives = 25/55 (45%)

Query: 6  EEENPAEETGEEKQDTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQK 60
          EE    EE  EE+++ QE+E +  E     KL A     G+K    D   KR  K
Sbjct: 4  EEVEQVEEQYEEEEEAQEEEEVQEEEKPRPKLTAPKIPEGEKVDFDDIQKKRQNK 58


>gi|112789541 troponin T3, skeletal, fast isoform 4 [Homo sapiens]
          Length = 250

 Score = 31.2 bits (69), Expect = 0.19
 Identities = 19/55 (34%), Positives = 25/55 (45%)

Query: 6  EEENPAEETGEEKQDTQEKEGILPERAEEAKLKAKYPSLGQKPGGSDFLMKRLQK 60
          EE    EE  EE+++ QE+E +  E     KL A     G+K    D   KR  K
Sbjct: 4  EEVEQVEEQYEEEEEAQEEEEVQEEEKPRPKLTAPKIPEGEKVDFDDIQKKRQNK 58


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.303    0.125    0.340 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,496,812
Number of Sequences: 37866
Number of extensions: 263216
Number of successful extensions: 2195
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 131
Number of HSP's successfully gapped in prelim test: 89
Number of HSP's that attempted gapping in prelim test: 1419
Number of HSP's gapped (non-prelim): 661
length of query: 121
length of database: 18,247,518
effective HSP length: 89
effective length of query: 32
effective length of database: 14,877,444
effective search space: 476078208
effective search space used: 476078208
T: 11
A: 40
X1: 17 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.8 bits)
S2: 55 (25.8 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press