Guide to the Human Genome
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Name: ARPP19 Sequence: fasta or formatted (112aa) NCBI GI: 5729732
Description:

cyclic AMP phosphoprotein, 19 kD

Referenced in:

Additional Brain Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.6         13           2
 C cysteine            0.0          0           0
 D aspartate           6.2          7           1
 E glutamate           8.9         10           2
 F phenylalanine       1.8          2           1
 G glycine             6.2          7           2
 H histidine           1.8          2           1
 I isoleucine          0.9          1           1
 K lysine             14.3         16           1
 L leucine             7.1          8           1
 M methionine          3.6          4           1
 N asparagine          1.8          2           1
 P proline             8.9         10           1
 Q glutamine           6.2          7           1
 R arginine            3.6          4           1
 S serine              6.2          7           1
 T threonine           4.5          5           1
 V valine              3.6          4           1
 W tryptophan          0.0          0           0
 Y tyrosine            2.7          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cyclic AMP phosphoprotein, 19 kD 
ENSA                  0.711   endosulfine alpha isoform 4 
ENSA                  0.711   endosulfine alpha isoform 3 
ENSA                  0.692   endosulfine alpha isoform 7 
ENSA                  0.692   endosulfine alpha isoform 6 
ENSA                  0.662   endosulfine alpha isoform 2 
ENSA                  0.662   endosulfine alpha isoform 1 
ENSA                  0.637   endosulfine alpha isoform 5 
LOC100128203          0.453   PREDICTED: similar to hCG2040272 
LOC100128203          0.453   PREDICTED: similar to hCG2040272 
LOC100128203          0.448   PREDICTED: similar to endosulfine alpha 
ENSA                  0.214   endosulfine alpha isoform 8 
PCLO                  0.050   piccolo isoform 2 
PCLO                  0.050   piccolo isoform 1 
TTN                   0.035   titin isoform N2-A 
CCDC124               0.020   coiled-coil domain containing 124 
CCDC124               0.020   coiled-coil domain containing 124 
CABIN1                0.020   calcineurin binding protein 1 
MAP7D1                0.020   MAP7 domain containing 1 
LONRF2                0.015   LON peptidase N-terminal domain and ring finger 2 [...
RAB33B                0.015   RAB33B, member RAS oncogene family 
TULP1                 0.015   tubby like protein 1 
KIAA1009              0.015   KIAA1009 protein 
SPAG1                 0.015   sperm associated antigen 1 
SPAG1                 0.015   sperm associated antigen 1 
ANKRD17               0.015   ankyrin repeat domain protein 17 isoform a 
ANKRD17               0.015   ankyrin repeat domain protein 17 isoform b 
TPM2                  0.015   tropomyosin 2 (beta) isoform 2 
TPM2                  0.015   tropomyosin 2 (beta) isoform 3 
PRAM1                 0.015   PML-RARA regulated adaptor molecule 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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