Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 4757980
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4757980 beta chimerin isoform 2 [Homo sapiens]
(468 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4757980 beta chimerin isoform 2 [Homo sapiens] 960 0.0
gi|4502813 chimerin (chimaerin) 1 isoform a [Homo sapiens] 702 0.0
gi|209364623 chimerin (chimaerin) 1 isoform b [Homo sapiens] 664 0.0
gi|91106928 beta chimerin isoform 1 [Homo sapiens] 575 e-164
gi|203097003 Rho GTPase activating protein 21 [Homo sapiens] 132 5e-31
gi|226693398 Rho GTPase activating protein 27 isoform b [Homo sa... 132 9e-31
gi|40548322 Rho GTPase activating protein 27 isoform a [Homo sap... 132 9e-31
gi|91208437 GEM interacting protein [Homo sapiens] 132 9e-31
gi|224458284 Rho GTPase activating protein 23 [Homo sapiens] 130 2e-30
gi|188497642 ARHGAP15 [Homo sapiens] 130 2e-30
gi|23510413 sorting nexin 26 [Homo sapiens] 130 3e-30
gi|194272142 myosin IXB isoform 2 [Homo sapiens] 130 3e-30
gi|33356170 myosin IXB isoform 1 [Homo sapiens] 130 3e-30
gi|50843948 Rho GTPase activating protein 10 [Homo sapiens] 130 3e-30
gi|26986534 Rho GTPase activating protein 12 [Homo sapiens] 128 1e-29
gi|156119615 myosin IXA [Homo sapiens] 128 1e-29
gi|208022687 GTPase regulator associated with the focal adhesion... 128 1e-29
gi|7662208 GTPase regulator associated with the focal adhesion k... 128 1e-29
gi|47834348 minor histocompatibility antigen HA-1 [Homo sapiens] 127 2e-29
gi|150417981 glucocorticoid receptor DNA binding factor 1 [Homo ... 126 5e-29
gi|4505507 oligophrenin 1 [Homo sapiens] 123 4e-28
gi|71834863 Rho GTPase activating protein 5 isoform a [Homo sapi... 122 9e-28
gi|71834861 Rho GTPase activating protein 5 isoform b [Homo sapi... 122 9e-28
gi|134304853 PTPL1-associated RhoGAP 1 [Homo sapiens] 120 3e-27
gi|218083800 Rho GTPase-activating protein isoform 1 [Homo sapiens] 120 3e-27
gi|29469071 Rho GTPase-activating protein isoform 2 [Homo sapiens] 120 3e-27
gi|122939147 Rho GTPase activating protein 9 isoform 1 [Homo sap... 119 5e-27
gi|122939149 Rho GTPase activating protein 9 isoform 3 [Homo sap... 119 5e-27
gi|186928844 Cdc42 GTPase-activating protein [Homo sapiens] 118 1e-26
gi|82546845 breakpoint cluster region isoform 2 [Homo sapiens] 117 2e-26
>gi|4757980 beta chimerin isoform 2 [Homo sapiens]
Length = 468
Score = 960 bits (2481), Expect = 0.0
Identities = 468/468 (100%), Positives = 468/468 (100%)
Query: 1 MAASSNSSLSGSSVSSDAEEYQPPIWKSYLYQLQQEAPRPKRIICPREVENRPKYYGREF 60
MAASSNSSLSGSSVSSDAEEYQPPIWKSYLYQLQQEAPRPKRIICPREVENRPKYYGREF
Sbjct: 1 MAASSNSSLSGSSVSSDAEEYQPPIWKSYLYQLQQEAPRPKRIICPREVENRPKYYGREF 60
Query: 61 HGIISREQADELLGGVEGAYILRESQRQPGCYTLALRFGNQTLNYRLFHDGKHFVGEKRF 120
HGIISREQADELLGGVEGAYILRESQRQPGCYTLALRFGNQTLNYRLFHDGKHFVGEKRF
Sbjct: 61 HGIISREQADELLGGVEGAYILRESQRQPGCYTLALRFGNQTLNYRLFHDGKHFVGEKRF 120
Query: 121 ESIHDLVTDGLITLYIETKAAEYISKMTTNPIYEHIGYATLLREKVSRRLSRSKNEPRKT 180
ESIHDLVTDGLITLYIETKAAEYISKMTTNPIYEHIGYATLLREKVSRRLSRSKNEPRKT
Sbjct: 121 ESIHDLVTDGLITLYIETKAAEYISKMTTNPIYEHIGYATLLREKVSRRLSRSKNEPRKT 180
Query: 181 NVTHEEHTAVEKISSLVRRAALTHNDNHFNYEKTHNFKVHTFRGPHWCEYCANFMWGLIA 240
NVTHEEHTAVEKISSLVRRAALTHNDNHFNYEKTHNFKVHTFRGPHWCEYCANFMWGLIA
Sbjct: 181 NVTHEEHTAVEKISSLVRRAALTHNDNHFNYEKTHNFKVHTFRGPHWCEYCANFMWGLIA 240
Query: 241 QGVRCSDCGLNVHKQCSKHVPNDCQPDLKRIKKVYCCDLTTLVKAHNTQRPMVVDICIRE 300
QGVRCSDCGLNVHKQCSKHVPNDCQPDLKRIKKVYCCDLTTLVKAHNTQRPMVVDICIRE
Sbjct: 241 QGVRCSDCGLNVHKQCSKHVPNDCQPDLKRIKKVYCCDLTTLVKAHNTQRPMVVDICIRE 300
Query: 301 IEARGLKSEGLYRVSGFTEHIEDVKMAFDRDGEKADISANVYPDINIITGALKLYFRDLP 360
IEARGLKSEGLYRVSGFTEHIEDVKMAFDRDGEKADISANVYPDINIITGALKLYFRDLP
Sbjct: 301 IEARGLKSEGLYRVSGFTEHIEDVKMAFDRDGEKADISANVYPDINIITGALKLYFRDLP 360
Query: 361 IPVITYDTYSKFIDAAKISNADERLEAVHEVLMLLPPAHYETLRYLMIHLKKVTMNEKDN 420
IPVITYDTYSKFIDAAKISNADERLEAVHEVLMLLPPAHYETLRYLMIHLKKVTMNEKDN
Sbjct: 361 IPVITYDTYSKFIDAAKISNADERLEAVHEVLMLLPPAHYETLRYLMIHLKKVTMNEKDN 420
Query: 421 FMNAENLGIVFGPTLMRPPEDSTLTTLHDMRYQKLIVQILIENEDVLF 468
FMNAENLGIVFGPTLMRPPEDSTLTTLHDMRYQKLIVQILIENEDVLF
Sbjct: 421 FMNAENLGIVFGPTLMRPPEDSTLTTLHDMRYQKLIVQILIENEDVLF 468
>gi|4502813 chimerin (chimaerin) 1 isoform a [Homo sapiens]
Length = 459
Score = 702 bits (1812), Expect = 0.0
Identities = 333/453 (73%), Positives = 390/453 (86%), Gaps = 1/453 (0%)
Query: 17 DAEEYQPPIWKSYLYQLQQEAPRPKRIICPREVENRPKYYGREFHGIISREQADELLGGV 76
D +EY+PP+WKSYLYQLQQEAP P+RI C EVENRPKYYGREFHG+ISRE AD+LL
Sbjct: 7 DTDEYRPPVWKSYLYQLQQEAPHPRRITCTCEVENRPKYYGREFHGMISREAADQLLIVA 66
Query: 77 EGAYILRESQRQPGCYTLALRFGNQTLNYRLFHDGKHFVGEKRFESIHDLVTDGLITLYI 136
EG+Y++RESQRQPG YTLALRFG+QT N+RL++DGKHFVGEKRFESIHDLVTDGLITLYI
Sbjct: 67 EGSYLIRESQRQPGTYTLALRFGSQTRNFRLYYDGKHFVGEKRFESIHDLVTDGLITLYI 126
Query: 137 ETKAAEYISKMTTNPIYEHIGYATLLREKVSRR-LSRSKNEPRKTNVTHEEHTAVEKISS 195
ETKAAEYI+KMT NPIYEH+GY TL RE ++ + K + + T ++ + ++++S
Sbjct: 127 ETKAAEYIAKMTINPIYEHVGYTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTS 186
Query: 196 LVRRAALTHNDNHFNYEKTHNFKVHTFRGPHWCEYCANFMWGLIAQGVRCSDCGLNVHKQ 255
LVRRA L N+ YEK HNFKVHTFRGPHWCEYCANFMWGLIAQGV+C+DCGLNVHKQ
Sbjct: 187 LVRRATLKENEQIPKYEKIHNFKVHTFRGPHWCEYCANFMWGLIAQGVKCADCGLNVHKQ 246
Query: 256 CSKHVPNDCQPDLKRIKKVYCCDLTTLVKAHNTQRPMVVDICIREIEARGLKSEGLYRVS 315
CSK VPNDC+PDLK +KKVY CDLTTLVKAH T+RPMVVD+CIREIE+RGL SEGLYRVS
Sbjct: 247 CSKMVPNDCKPDLKHVKKVYSCDLTTLVKAHTTKRPMVVDMCIREIESRGLNSEGLYRVS 306
Query: 316 GFTEHIEDVKMAFDRDGEKADISANVYPDINIITGALKLYFRDLPIPVITYDTYSKFIDA 375
GF++ IEDVKMAFDRDGEKADIS N+Y DINIITGALKLYFRDLPIP+ITYD Y KFI++
Sbjct: 307 GFSDLIEDVKMAFDRDGEKADISVNMYEDINIITGALKLYFRDLPIPLITYDAYPKFIES 366
Query: 376 AKISNADERLEAVHEVLMLLPPAHYETLRYLMIHLKKVTMNEKDNFMNAENLGIVFGPTL 435
AKI + DE+LE +HE L LLPPAH ETLRYLM HLK+VT++EK+N MNAENLGIVFGPTL
Sbjct: 367 AKIMDPDEQLETLHEALKLLPPAHCETLRYLMAHLKRVTLHEKENLMNAENLGIVFGPTL 426
Query: 436 MRPPEDSTLTTLHDMRYQKLIVQILIENEDVLF 468
MR PE + L+D+RYQ+L+V++LI+NED+LF
Sbjct: 427 MRSPELDAMAALNDIRYQRLVVELLIKNEDILF 459
>gi|209364623 chimerin (chimaerin) 1 isoform b [Homo sapiens]
Length = 433
Score = 664 bits (1713), Expect = 0.0
Identities = 321/452 (71%), Positives = 371/452 (82%), Gaps = 25/452 (5%)
Query: 17 DAEEYQPPIWKSYLYQLQQEAPRPKRIICPREVENRPKYYGREFHGIISREQADELLGGV 76
D +EY+PP+WKSYLYQLQQEAP P+RI C EVENRPKYYGREFHG+ISRE AD+LL
Sbjct: 7 DTDEYRPPVWKSYLYQLQQEAPHPRRITCTCEVENRPKYYGREFHGMISREAADQLLIVA 66
Query: 77 EGAYILRESQRQPGCYTLALRFGNQTLNYRLFHDGKHFVGEKRFESIHDLVTDGLITLYI 136
EG+Y++RESQRQPG YTLALRFG+QT N+RL++DGKHFVGEKRFESIHDLVTDGLITLYI
Sbjct: 67 EGSYLIRESQRQPGTYTLALRFGSQTRNFRLYYDGKHFVGEKRFESIHDLVTDGLITLYI 126
Query: 137 ETKAAEYISKMTTNPIYEHIGYATLLREKVSRRLSRSKNEPRKTNVTHEEHTAVEKISSL 196
ETKAAEYI+KMT NPIYEH+GY TL RE ++ E TH+E + +
Sbjct: 127 ETKAAEYIAKMTINPIYEHVGYTTLNREPAYKKHMPVLKE------THDERDSTGQDGVS 180
Query: 197 VRRAALTHNDNHFNYEKTHNFKVHTFRGPHWCEYCANFMWGLIAQGVRCSDCGLNVHKQC 256
+R VHTFRGPHWCEYCANFMWGLIAQGV+C+DCGLNVHKQC
Sbjct: 181 EKR-------------------VHTFRGPHWCEYCANFMWGLIAQGVKCADCGLNVHKQC 221
Query: 257 SKHVPNDCQPDLKRIKKVYCCDLTTLVKAHNTQRPMVVDICIREIEARGLKSEGLYRVSG 316
SK VPNDC+PDLK +KKVY CDLTTLVKAH T+RPMVVD+CIREIE+RGL SEGLYRVSG
Sbjct: 222 SKMVPNDCKPDLKHVKKVYSCDLTTLVKAHTTKRPMVVDMCIREIESRGLNSEGLYRVSG 281
Query: 317 FTEHIEDVKMAFDRDGEKADISANVYPDINIITGALKLYFRDLPIPVITYDTYSKFIDAA 376
F++ IEDVKMAFDRDGEKADIS N+Y DINIITGALKLYFRDLPIP+ITYD Y KFI++A
Sbjct: 282 FSDLIEDVKMAFDRDGEKADISVNMYEDINIITGALKLYFRDLPIPLITYDAYPKFIESA 341
Query: 377 KISNADERLEAVHEVLMLLPPAHYETLRYLMIHLKKVTMNEKDNFMNAENLGIVFGPTLM 436
KI + DE+LE +HE L LLPPAH ETLRYLM HLK+VT++EK+N MNAENLGIVFGPTLM
Sbjct: 342 KIMDPDEQLETLHEALKLLPPAHCETLRYLMAHLKRVTLHEKENLMNAENLGIVFGPTLM 401
Query: 437 RPPEDSTLTTLHDMRYQKLIVQILIENEDVLF 468
R PE + L+D+RYQ+L+V++LI+NED+LF
Sbjct: 402 RSPELDAMAALNDIRYQRLVVELLIKNEDILF 433
>gi|91106928 beta chimerin isoform 1 [Homo sapiens]
Length = 332
Score = 575 bits (1483), Expect = e-164
Identities = 277/280 (98%), Positives = 278/280 (99%)
Query: 189 AVEKISSLVRRAALTHNDNHFNYEKTHNFKVHTFRGPHWCEYCANFMWGLIAQGVRCSDC 248
A +ISSLVRRAALTHNDNHFNYEKTHNFKVHTFRGPHWCEYCANFMWGLIAQGVRCSDC
Sbjct: 53 ACSQISSLVRRAALTHNDNHFNYEKTHNFKVHTFRGPHWCEYCANFMWGLIAQGVRCSDC 112
Query: 249 GLNVHKQCSKHVPNDCQPDLKRIKKVYCCDLTTLVKAHNTQRPMVVDICIREIEARGLKS 308
GLNVHKQCSKHVPNDCQPDLKRIKKVYCCDLTTLVKAHNTQRPMVVDICIREIEARGLKS
Sbjct: 113 GLNVHKQCSKHVPNDCQPDLKRIKKVYCCDLTTLVKAHNTQRPMVVDICIREIEARGLKS 172
Query: 309 EGLYRVSGFTEHIEDVKMAFDRDGEKADISANVYPDINIITGALKLYFRDLPIPVITYDT 368
EGLYRVSGFTEHIEDVKMAFDRDGEKADISANVYPDINIITGALKLYFRDLPIPVITYDT
Sbjct: 173 EGLYRVSGFTEHIEDVKMAFDRDGEKADISANVYPDINIITGALKLYFRDLPIPVITYDT 232
Query: 369 YSKFIDAAKISNADERLEAVHEVLMLLPPAHYETLRYLMIHLKKVTMNEKDNFMNAENLG 428
YSKFIDAAKISNADERLEAVHEVLMLLPPAHYETLRYLMIHLKKVTMNEKDNFMNAENLG
Sbjct: 233 YSKFIDAAKISNADERLEAVHEVLMLLPPAHYETLRYLMIHLKKVTMNEKDNFMNAENLG 292
Query: 429 IVFGPTLMRPPEDSTLTTLHDMRYQKLIVQILIENEDVLF 468
IVFGPTLMRPPEDSTLTTLHDMRYQKLIVQILIENEDVLF
Sbjct: 293 IVFGPTLMRPPEDSTLTTLHDMRYQKLIVQILIENEDVLF 332
>gi|203097003 Rho GTPase activating protein 21 [Homo sapiens]
Length = 1958
Score = 132 bits (333), Expect = 5e-31
Identities = 71/182 (39%), Positives = 106/182 (58%)
Query: 287 NTQRPMVVDICIREIEARGLKSEGLYRVSGFTEHIEDVKMAFDRDGEKADISANVYPDIN 346
N P++VDIC + +E RGL+ G+YRV G I ++ ++ DI + + D+N
Sbjct: 1158 NRYIPLIVDICCKLVEERGLEYTGIYRVPGNNAAISSMQEELNKGMADIDIQDDKWRDLN 1217
Query: 347 IITGALKLYFRDLPIPVITYDTYSKFIDAAKISNADERLEAVHEVLMLLPPAHYETLRYL 406
+I+ LK +FR LP P+ T D Y+ FI+A + + +RL+ + ++ LP HYETL++L
Sbjct: 1218 VISSLLKSFFRKLPEPLFTNDKYADFIEANRKEDPLDRLKTLKRLIHDLPEHHYETLKFL 1277
Query: 407 MIHLKKVTMNEKDNFMNAENLGIVFGPTLMRPPEDSTLTTLHDMRYQKLIVQILIENEDV 466
HLK V N + N M NL IVFGPTL+R ED+ + M Q IV+ LI++ D
Sbjct: 1278 SAHLKTVAENSEKNKMEPRNLAIVFGPTLVRTSEDNMTHMVTHMPDQYKIVETLIQHHDW 1337
Query: 467 LF 468
F
Sbjct: 1338 FF 1339
>gi|226693398 Rho GTPase activating protein 27 isoform b [Homo
sapiens]
Length = 521
Score = 132 bits (331), Expect = 9e-31
Identities = 68/190 (35%), Positives = 116/190 (61%), Gaps = 2/190 (1%)
Query: 273 KVYCCDLTTLVKAHNTQRPMVVDICIREIEARGLKSEGLYRVSGFTEHIEDVKMAFDRDG 332
+V+ C L L + ++ P V CIR +EARGL +GLYR+SG I+ ++ D D
Sbjct: 325 QVFGCALAALCERERSRVPRFVQQCIRAVEARGLDIDGLYRISGNLATIQKLRYKVDHD- 383
Query: 333 EKADISANVYPDINIITGALKLYFRDLPIPVITYDTYSKFIDAAKISNADERLEAVHEVL 392
E+ D+ + D+++ITGALKL+FR+LP P+ + + +FI A K+ + R V +++
Sbjct: 384 ERLDLDDGRWEDVHVITGALKLFFRELPEPLFPFSHFRQFIAAIKLQDQARRSRCVRDLV 443
Query: 393 MLLPPAHYETLRYLMIHLKKVTMNEKDNFMNAENLGIVFGPTLMRPPEDSTLTTLHDMRY 452
LP +++TLR L HL +V + + N M+ +++ IVFGPTL+RP + T + M +
Sbjct: 444 RSLPAPNHDTLRMLFQHLCRVIEHGEQNRMSVQSVAIVFGPTLLRPEVEETSMPM-TMVF 502
Query: 453 QKLIVQILIE 462
Q +V+++++
Sbjct: 503 QNQVVELILQ 512
>gi|40548322 Rho GTPase activating protein 27 isoform a [Homo
sapiens]
Length = 548
Score = 132 bits (331), Expect = 9e-31
Identities = 68/190 (35%), Positives = 116/190 (61%), Gaps = 2/190 (1%)
Query: 273 KVYCCDLTTLVKAHNTQRPMVVDICIREIEARGLKSEGLYRVSGFTEHIEDVKMAFDRDG 332
+V+ C L L + ++ P V CIR +EARGL +GLYR+SG I+ ++ D D
Sbjct: 352 QVFGCALAALCERERSRVPRFVQQCIRAVEARGLDIDGLYRISGNLATIQKLRYKVDHD- 410
Query: 333 EKADISANVYPDINIITGALKLYFRDLPIPVITYDTYSKFIDAAKISNADERLEAVHEVL 392
E+ D+ + D+++ITGALKL+FR+LP P+ + + +FI A K+ + R V +++
Sbjct: 411 ERLDLDDGRWEDVHVITGALKLFFRELPEPLFPFSHFRQFIAAIKLQDQARRSRCVRDLV 470
Query: 393 MLLPPAHYETLRYLMIHLKKVTMNEKDNFMNAENLGIVFGPTLMRPPEDSTLTTLHDMRY 452
LP +++TLR L HL +V + + N M+ +++ IVFGPTL+RP + T + M +
Sbjct: 471 RSLPAPNHDTLRMLFQHLCRVIEHGEQNRMSVQSVAIVFGPTLLRPEVEETSMPM-TMVF 529
Query: 453 QKLIVQILIE 462
Q +V+++++
Sbjct: 530 QNQVVELILQ 539
>gi|91208437 GEM interacting protein [Homo sapiens]
Length = 970
Score = 132 bits (331), Expect = 9e-31
Identities = 90/275 (32%), Positives = 136/275 (49%), Gaps = 28/275 (10%)
Query: 213 KTHNFKVHTFRGPHWCEYCANFMWGLIAQGVRCSDCGLNVHKQCSKHVPNDC-QPDLKRI 271
+TH + RGP C C FM G C +C L HK+C + + C L
Sbjct: 492 QTHQLR--RLRGPAKCRECEAFM----VSGTECEECFLTCHKRCLETLLILCGHRRLPAR 545
Query: 272 KKVYCCDLTTLVKAHNTQRPMVVDICIREIEARGLKSEGLYRVSGFTEHIEDVKMAFDRD 331
++ D L + + P VV C EIE R L +G+YRVSG +E + AF+
Sbjct: 546 TPLFGVDFLQLPRDFPEEVPFVVTKCTAEIEHRALDVQGIYRVSGSRVRVERLCQAFENG 605
Query: 332 GEKADISANVYPDINIITGALKLYFRDLPIPVITYDTYSKFIDAAKISNAD--------- 382
++S N D++ + LK + ++L PVI + Y FI AK +AD
Sbjct: 606 RALVELSGNSPHDVSSV---LKRFLQELTEPVIPFHLYDAFISLAKTLHADPGDDPGTPS 662
Query: 383 ---ERLEAVHEVLMLLPPAHYETLRYLMIHLKKVTMNEKDNFMNAENLGIVFGPTLMRPP 439
E + ++ +L+ LP ++Y TLR+L+ HL +V +N M+A NLGIVFGPTL+RPP
Sbjct: 663 PSPEVIRSLKTLLVQLPDSNYNTLRHLVAHLFRVAARFMENKMSANNLGIVFGPTLLRPP 722
Query: 440 EDS------TLTTLHDMRYQKLIVQILIENEDVLF 468
+ +T L D +Q +V+ LI + + +F
Sbjct: 723 DGPRAASAIPVTCLLDSGHQAQLVEFLIVHYEQIF 757
>gi|224458284 Rho GTPase activating protein 23 [Homo sapiens]
Length = 1397
Score = 130 bits (328), Expect = 2e-30
Identities = 75/227 (33%), Positives = 121/227 (53%), Gaps = 24/227 (10%)
Query: 249 GLNVHKQCSKHVPN-------DCQPDLKRIKKVYCCDLTTLVKAHNTQRPMVVDICIREI 301
G+N+ K+ K P +CQP N + P++V C R +
Sbjct: 794 GINIIKKNKKAAPRAFGVRLEECQP-----------------ATENQRVPLIVAACCRIV 836
Query: 302 EARGLKSEGLYRVSGFTEHIEDVKMAFDRDGEKADISANVYPDINIITGALKLYFRDLPI 361
EARGL+S G+YRV G + ++ +R ++ + D+N+I+ LK +FR LP
Sbjct: 837 EARGLESTGIYRVPGNNAVVSSLQEQLNRGPGDINLQDERWQDLNVISSLLKSFFRKLPE 896
Query: 362 PVITYDTYSKFIDAAKISNADERLEAVHEVLMLLPPAHYETLRYLMIHLKKVTMNEKDNF 421
P+ T D Y+ FI+A +I +A ER+ + +++ LP +YETL++L+ HLK + + + N
Sbjct: 897 PLFTDDKYNDFIEANRIEDARERMRTLRKLIRDLPGHYYETLKFLVGHLKTIADHSEKNK 956
Query: 422 MNAENLGIVFGPTLMRPPEDSTLTTLHDMRYQKLIVQILIENEDVLF 468
M NL +VFGPTL+R ED+ + M + IV+ LI++ D F
Sbjct: 957 MEPRNLALVFGPTLVRTSEDNMTDMVTHMPDRYKIVETLIQHSDWFF 1003
>gi|188497642 ARHGAP15 [Homo sapiens]
Length = 475
Score = 130 bits (328), Expect = 2e-30
Identities = 68/211 (32%), Positives = 123/211 (58%), Gaps = 9/211 (4%)
Query: 265 QPDLKRIKK-------VYCCDLTTLVKAHNTQRPMVVDICIREIEARGLKSEGLYRVSGF 317
+P LK +++ ++ L + + N+ P V CI +E RGL +G+YRVSG
Sbjct: 262 RPSLKTLQEKGLIKDQIFGSHLHKVCERENSTVPWFVKQCIEAVEKRGLDVDGIYRVSGN 321
Query: 318 TEHIEDVKMAFDRDGEKADISANVYPDINIITGALKLYFRDLPIPVITYDTYSKFIDAAK 377
I+ ++ +++ EK ++ + + DI+++TGALK++FR+LP P+ Y + +F++A K
Sbjct: 322 LATIQKLRFIVNQE-EKLNLDDSQWEDIHVVTGALKMFFRELPEPLFPYSFFEQFVEAIK 380
Query: 378 ISNADERLEAVHEVLMLLPPAHYETLRYLMIHLKKVTMNEKDNFMNAENLGIVFGPTLMR 437
+ + R+EAV ++ LPP + +T++ L HL K+ N M+ ++LGIVFGPTL+R
Sbjct: 381 KQDNNTRIEAVKSLVQKLPPPNRDTMKVLFGHLTKIVAKASKNLMSTQSLGIVFGPTLLR 440
Query: 438 PPEDSTLTTLHDMRYQKLIVQILIENEDVLF 468
++ +H M YQ I ++++ +F
Sbjct: 441 AENETGNMAIH-MVYQNQIAELMLSEYSKIF 470
>gi|23510413 sorting nexin 26 [Homo sapiens]
Length = 1126
Score = 130 bits (327), Expect = 3e-30
Identities = 70/202 (34%), Positives = 113/202 (55%), Gaps = 6/202 (2%)
Query: 272 KKVYCCDLTTLVKAHNTQRPMVVDICIREIEARGLKSEGLYRVSGFTEHIEDVKMAFDRD 331
++V+ CDL + P V+ C IEA G+ +G+YR+SG + +I+ ++ FD +
Sbjct: 310 QRVFGCDLGEHLSNSGQDVPQVLRCCSEFIEAHGVV-DGIYRLSGVSSNIQRLRHEFDSE 368
Query: 332 GEKADISANVYPDINIITGALKLYFRDLPIPVITYDTYSKFIDAAKISNADERLEAVHEV 391
DI+ ++ KLYFR+LP P++TY Y KF +A + +ERL VH+V
Sbjct: 369 RIPELSGPAFLQDIHSVSSLCKLYFRELPNPLLTYQLYGKFSEAMSVPGEEERLVRVHDV 428
Query: 392 LMLLPPAHYETLRYLMIHLKKVTMNEKDNFMNAENLGIVFGPTLMRPPEDSTL-----TT 446
+ LPP HY TL YL+ HL ++ + + M+A NL IV+ P L+R E ++
Sbjct: 429 IQQLPPPHYRTLEYLLRHLARMARHSANTSMHARNLAIVWAPNLLRSMELESVGMGGAAA 488
Query: 447 LHDMRYQKLIVQILIENEDVLF 468
++R Q ++V+ L+ + DVLF
Sbjct: 489 FREVRVQSVVVEFLLTHVDVLF 510
>gi|194272142 myosin IXB isoform 2 [Homo sapiens]
Length = 2022
Score = 130 bits (326), Expect = 3e-30
Identities = 92/312 (29%), Positives = 155/312 (49%), Gaps = 31/312 (9%)
Query: 162 LREKVSRRLSRSKNEPRKTNVTHEEHTAVEKISSLVRRAALTHNDNHFNYEKTHNFKVHT 221
L ++ +R +++ EP K + ++ E RA HN H F +
Sbjct: 1595 LLDEFTRGYTKNDFEPVKQSKAQKKKRKQE-------RAVQEHNG--------HVFASYQ 1639
Query: 222 FRGPHWCEYCANFMWGLIAQGVRCSDCGLNVHKQCSKHVPNDC--------QPDLKRIKK 273
P CE C +++W L+ + + CS C + HK+C + + C +P ++
Sbjct: 1640 VSIPQSCEQCLSYIW-LMDKALLCSVCKMTCHKKCVHKIQSHCSYTYGRKGEPGVEPGHF 1698
Query: 274 VYCCDLTTLVKAHNTQRPMVVDICIREIEARGLKSEGLYRVSGFTEHIEDVKMAFDRDGE 333
C D T KA P+V++ + +E GL +EGLYR SG +++ A D
Sbjct: 1699 GVCVDSLTSDKA---SVPIVLEKLLEHVEMHGLYTEGLYRKSGAANRTRELRQALQTD-- 1753
Query: 334 KADISANVYPDINIITGALKLYFRDLPIPVITYDTYSKFIDAAKISNADERLEAVHEVLM 393
A + +P I+ ITG LK + R+LP P++T+ Y F+ A ++ E+L A++ VL
Sbjct: 1754 PAAVKLENFP-IHAITGVLKQWLRELPEPLMTFAQYGDFLRAVELPEKQEQLAAIYAVLE 1812
Query: 394 LLPPAHYETLRYLMIHLKKVTMNEKDNFMNAENLGIVFGPTLMRPPEDS-TLTTLHDMRY 452
LP A++ +L L+ HL KV + E N M+ L I+F P L+R P++S LT++ D+
Sbjct: 1813 HLPEANHNSLERLIFHLVKVALLEDVNRMSPGALAIIFAPCLLRCPDNSDPLTSMKDVLK 1872
Query: 453 QKLIVQILIENE 464
V++LI+ +
Sbjct: 1873 ITTCVEMLIKEQ 1884
>gi|33356170 myosin IXB isoform 1 [Homo sapiens]
Length = 2157
Score = 130 bits (326), Expect = 3e-30
Identities = 92/312 (29%), Positives = 155/312 (49%), Gaps = 31/312 (9%)
Query: 162 LREKVSRRLSRSKNEPRKTNVTHEEHTAVEKISSLVRRAALTHNDNHFNYEKTHNFKVHT 221
L ++ +R +++ EP K + ++ E RA HN H F +
Sbjct: 1595 LLDEFTRGYTKNDFEPVKQSKAQKKKRKQE-------RAVQEHNG--------HVFASYQ 1639
Query: 222 FRGPHWCEYCANFMWGLIAQGVRCSDCGLNVHKQCSKHVPNDC--------QPDLKRIKK 273
P CE C +++W L+ + + CS C + HK+C + + C +P ++
Sbjct: 1640 VSIPQSCEQCLSYIW-LMDKALLCSVCKMTCHKKCVHKIQSHCSYTYGRKGEPGVEPGHF 1698
Query: 274 VYCCDLTTLVKAHNTQRPMVVDICIREIEARGLKSEGLYRVSGFTEHIEDVKMAFDRDGE 333
C D T KA P+V++ + +E GL +EGLYR SG +++ A D
Sbjct: 1699 GVCVDSLTSDKA---SVPIVLEKLLEHVEMHGLYTEGLYRKSGAANRTRELRQALQTD-- 1753
Query: 334 KADISANVYPDINIITGALKLYFRDLPIPVITYDTYSKFIDAAKISNADERLEAVHEVLM 393
A + +P I+ ITG LK + R+LP P++T+ Y F+ A ++ E+L A++ VL
Sbjct: 1754 PAAVKLENFP-IHAITGVLKQWLRELPEPLMTFAQYGDFLRAVELPEKQEQLAAIYAVLE 1812
Query: 394 LLPPAHYETLRYLMIHLKKVTMNEKDNFMNAENLGIVFGPTLMRPPEDS-TLTTLHDMRY 452
LP A++ +L L+ HL KV + E N M+ L I+F P L+R P++S LT++ D+
Sbjct: 1813 HLPEANHNSLERLIFHLVKVALLEDVNRMSPGALAIIFAPCLLRCPDNSDPLTSMKDVLK 1872
Query: 453 QKLIVQILIENE 464
V++LI+ +
Sbjct: 1873 ITTCVEMLIKEQ 1884
>gi|50843948 Rho GTPase activating protein 10 [Homo sapiens]
Length = 786
Score = 130 bits (326), Expect = 3e-30
Identities = 68/178 (38%), Positives = 108/178 (60%), Gaps = 3/178 (1%)
Query: 293 VVDICIREIEARGLKSEGLYRVSGFTEHIEDV-KMAFD-RDGEKADISANVYPDINIITG 350
++ CI +E RG+ +GLYRV G + ++ + M D + + D+ + ++ IT
Sbjct: 398 IIRKCISAVETRGINDQGLYRVVGVSSKVQRLLSMLMDVKTCNEVDLENSADWEVKTITS 457
Query: 351 ALKLYFRDLPIPVITYDTYSKFIDAAKISNADERLEAVHEVLMLLPPAHYETLRYLMIHL 410
ALK Y R LP P++TY+ + FI AK + + R+ A+H ++ LP + E L L+ HL
Sbjct: 458 ALKQYLRSLPEPLMTYELHGDFIVPAKSGSPESRVNAIHFLVHKLPEKNKEMLDILVKHL 517
Query: 411 KKVTMNEKDNFMNAENLGIVFGPTLMRPPEDSTLTTLHDMRYQKLIVQILIENEDVLF 468
V+ + K N M NLG+VFGPTLMRP E+ T+ L D+++Q ++V+ILIEN + +F
Sbjct: 518 TNVSNHSKQNLMTVANLGVVFGPTLMRPQEE-TVAALMDLKFQNIVVEILIENHEKIF 574
>gi|26986534 Rho GTPase activating protein 12 [Homo sapiens]
Length = 846
Score = 128 bits (322), Expect = 1e-29
Identities = 66/189 (34%), Positives = 120/189 (63%), Gaps = 3/189 (1%)
Query: 273 KVYCCDLTTLVKAHNTQRPMVVDICIREIEARGLKSEGLYRVSGFTEHIEDVKMAFDRDG 332
+V+ +L L + N P V +CI +E GL +G+YRVSG I+ ++ A + D
Sbjct: 652 QVFGSNLANLCQRENGTVPKFVKLCIEHVEEHGLDIDGIYRVSGNLAVIQKLRFAVNHD- 710
Query: 333 EKADISANVYPDINIITGALKLYFRDLPIPVITYDTYSKFIDAAKISNADERLEAVHEVL 392
EK D++ + + DI++ITGALK++FR+LP P+ T++ ++ F++A K +R+ AV +++
Sbjct: 711 EKLDLNDSKWEDIHVITGALKMFFRELPEPLFTFNHFNDFVNAIK-QEPRQRVAAVKDLI 769
Query: 393 MLLPPAHYETLRYLMIHLKKVTMNEKDNFMNAENLGIVFGPTLMRPPEDSTLTTLHDMRY 452
LP + +T++ L HL++V N + N M +++ IVFGPTL++P +++ +H + Y
Sbjct: 770 RQLPKPNQDTMQILFRHLRRVIENGEKNRMTYQSIAIVFGPTLLKPEKETGNIAVHTV-Y 828
Query: 453 QKLIVQILI 461
Q IV++++
Sbjct: 829 QNQIVELIL 837
>gi|156119615 myosin IXA [Homo sapiens]
Length = 2548
Score = 128 bits (321), Expect = 1e-29
Identities = 75/250 (30%), Positives = 127/250 (50%), Gaps = 8/250 (3%)
Query: 215 HNFKVHTFRGPHWCEYCANFMWGLIAQGVRCSDCGLNVHKQCSKHVPNDCQP--DLKRIK 272
H FK + P +CEYC++ +W + V C C HK+C C D +
Sbjct: 2000 HIFKATQYSIPTYCEYCSSLIWIMDRASV-CKLCKYACHKKCCLKTTAKCSKKYDPELSS 2058
Query: 273 KVYCCDLTTLVKAHNTQRPMVVDICIREIEARGLKSEGLYRVSGFTEHIEDVKMAFDRDG 332
+ + +L+ L T P+VV+ I IE GL +EG+YR SG T I++++ D D
Sbjct: 2059 RQFGVELSRLTSEDRTV-PLVVEKLINYIEMHGLYTEGIYRKSGSTNKIKELRQGLDTDA 2117
Query: 333 EKADISANVYPDINIITGALKLYFRDLPIPVITYDTYSKFIDAAKISNADERLEAVHEVL 392
E ++ +I++I K + RDLP P++T++ Y +F+ A + E + V+ V+
Sbjct: 2118 ESVNLDDY---NIHVIASVFKQWLRDLPNPLMTFELYEEFLRAMGLQERKETIRGVYSVI 2174
Query: 393 MLLPPAHYETLRYLMIHLKKVTMNEKDNFMNAENLGIVFGPTLMRPPEDS-TLTTLHDMR 451
L H TL L+ HL ++ + E N M+A L IVF P ++R P+ + L ++ D+
Sbjct: 2175 DQLSRTHLNTLERLIFHLVRIALQEDTNRMSANALAIVFAPCILRCPDTTDPLQSVQDIS 2234
Query: 452 YQKLIVQILI 461
V++++
Sbjct: 2235 KTTTCVELIV 2244
>gi|208022687 GTPase regulator associated with the focal adhesion
kinase pp125 isoform b [Homo sapiens]
Length = 759
Score = 128 bits (321), Expect = 1e-29
Identities = 69/183 (37%), Positives = 105/183 (57%), Gaps = 13/183 (7%)
Query: 293 VVDICIREIEARGLKSEGLYRVSGFTEHIE-------DVKMAFDRDGEKADISANVYPDI 345
++ CI +E RG+ +GLYR+ G ++ D K A + + DI A +I
Sbjct: 392 IIRKCIHAVETRGINEQGLYRIVGVNSRVQKLLSVLMDPKTASETE---TDICAEW--EI 446
Query: 346 NIITGALKLYFRDLPIPVITYDTYSKFIDAAKISNADERLEAVHEVLMLLPPAHYETLRY 405
IT ALK Y R LP P++ Y FI AAK+ N + R+ +H ++ LP + + L+
Sbjct: 447 KTITSALKTYLRMLPGPLMMYQFQRSFIKAAKLENQESRVSEIHSLVHRLPEKNRQMLQL 506
Query: 406 LMIHLKKVTMNEKDNFMNAENLGIVFGPTLMRPPEDSTLTTLHDMRYQKLIVQILIENED 465
LM HL V N K N M NLG+VFGPTL+RP E+ T+ + D+++Q ++++ILIEN +
Sbjct: 507 LMNHLANVANNHKQNLMTVANLGVVFGPTLLRPQEE-TVAAIMDIKFQNIVIEILIENHE 565
Query: 466 VLF 468
+F
Sbjct: 566 KIF 568
>gi|7662208 GTPase regulator associated with the focal adhesion
kinase pp125 isoform a [Homo sapiens]
Length = 814
Score = 128 bits (321), Expect = 1e-29
Identities = 69/183 (37%), Positives = 105/183 (57%), Gaps = 13/183 (7%)
Query: 293 VVDICIREIEARGLKSEGLYRVSGFTEHIE-------DVKMAFDRDGEKADISANVYPDI 345
++ CI +E RG+ +GLYR+ G ++ D K A + + DI A +I
Sbjct: 392 IIRKCIHAVETRGINEQGLYRIVGVNSRVQKLLSVLMDPKTASETE---TDICAEW--EI 446
Query: 346 NIITGALKLYFRDLPIPVITYDTYSKFIDAAKISNADERLEAVHEVLMLLPPAHYETLRY 405
IT ALK Y R LP P++ Y FI AAK+ N + R+ +H ++ LP + + L+
Sbjct: 447 KTITSALKTYLRMLPGPLMMYQFQRSFIKAAKLENQESRVSEIHSLVHRLPEKNRQMLQL 506
Query: 406 LMIHLKKVTMNEKDNFMNAENLGIVFGPTLMRPPEDSTLTTLHDMRYQKLIVQILIENED 465
LM HL V N K N M NLG+VFGPTL+RP E+ T+ + D+++Q ++++ILIEN +
Sbjct: 507 LMNHLANVANNHKQNLMTVANLGVVFGPTLLRPQEE-TVAAIMDIKFQNIVIEILIENHE 565
Query: 466 VLF 468
+F
Sbjct: 566 KIF 568
>gi|47834348 minor histocompatibility antigen HA-1 [Homo sapiens]
Length = 1136
Score = 127 bits (319), Expect = 2e-29
Identities = 89/282 (31%), Positives = 147/282 (52%), Gaps = 34/282 (12%)
Query: 213 KTHNFKVHTFRGPHWCEYCANFMWGLIAQGVRCSDCGLNVHKQCSKHVPNDC-QPDLKRI 271
+TH ++ R P C C ++++ QG C +C L HK+C + + C L+
Sbjct: 701 RTH--RLRKLRTPAKCRECNSYVY---FQGAECEECCLACHKKCLETLAIQCGHKKLQGR 755
Query: 272 KKVYCCDLTTLVKAHNTQRPMVVDICIREIEARGLKSEGLYRVSGFTEHIEDVKMAFDRD 331
+++ D + ++ P +V C+ EIE R L+++G+YRV+G +E + AF+
Sbjct: 756 LQLFGQDFSHAARSAPDGVPFIVKKCVCEIERRALRTKGIYRVNGVKTRVEKLCQAFENG 815
Query: 332 GEKADISANVYPDINIITGALKLYFRDLPIPVITYDTYSKFIDAAKISNADE-------- 383
E ++S DI+ + LKLY R LP P+I++ Y + + AK S E
Sbjct: 816 KELVELSQASPHDISNV---LKLYLRQLPEPLISFRLYHELVGLAKDSLKAEAEAKAASR 872
Query: 384 ------RLEAV--------HEVLMLLPPAHYETLRYLMIHLKKVTMNEKDNFMNAENLGI 429
EAV E+L LPP + +L+YL+ HL+++ E+DN M NLGI
Sbjct: 873 GRQDGSESEAVAVALAGRLRELLRDLPPENRASLQYLLRHLRRIVEVEQDNKMTPGNLGI 932
Query: 430 VFGPTLMRP-PEDST--LTTLHDMRYQKLIVQILIENEDVLF 468
VFGPTL+RP P ++T L++L D +Q +++ LI + ++F
Sbjct: 933 VFGPTLLRPRPTEATVSLSSLVDYPHQARVIETLIVHYGLVF 974
>gi|150417981 glucocorticoid receptor DNA binding factor 1 [Homo
sapiens]
Length = 1499
Score = 126 bits (316), Expect = 5e-29
Identities = 69/184 (37%), Positives = 112/184 (60%), Gaps = 4/184 (2%)
Query: 279 LTTLVKAHNTQRPMVVDICIREIEARGLKSEGLYRVSGFTEHIEDVKMAFDRDGEKADIS 338
LTT+V P+ ++ CI IEA GL +EG+YRVSG +E ++ FD+D D++
Sbjct: 1251 LTTVVTPEKPI-PIFIERCIEYIEATGLSTEGIYRVSGNKSEMESLQRQFDQD-HNLDLA 1308
Query: 339 ANVYPDINIITGALKLYFRDLPIPVITYDTYSKFIDAAKISNADERLEAVHEVLMLLPPA 398
+ +N + GA+K +F +LP P++ Y+ ++A KI++ +++L A+ EVL P
Sbjct: 1309 EKDFT-VNTVAGAMKSFFSELPDPLVPYNMQIDLVEAHKINDREQKLHALKEVLKKFPKE 1367
Query: 399 HYETLRYLMIHLKKVTMNEKDNFMNAENLGIVFGPTLMRPPEDSTLTTLHDMRYQKLIVQ 458
++E +Y++ HL KV+ N K N M +ENL I F PTLMR P+ ST+ L R + I++
Sbjct: 1368 NHEVFKYVISHLNKVSHNNKVNLMTSENLSICFWPTLMR-PDFSTMDALTATRTYQTIIE 1426
Query: 459 ILIE 462
+ I+
Sbjct: 1427 LFIQ 1430
>gi|4505507 oligophrenin 1 [Homo sapiens]
Length = 802
Score = 123 bits (308), Expect = 4e-28
Identities = 67/168 (39%), Positives = 100/168 (59%), Gaps = 2/168 (1%)
Query: 297 CIREIEARGLKSEGLYRVSGFTEHIEDVKMAFDRDGEKADISA-NVYPDINIITGALKLY 355
CI IE +G+K+EGLYR G ++ + AF D+ N DI IT +LK Y
Sbjct: 393 CINIIETKGIKTEGLYRTVGSNIQVQKLLNAFFDPKCPGDVDFHNSDWDIKTITSSLKFY 452
Query: 356 FRDLPIPVITYDTYSKFIDAAKISNADERLEAVHEVLMLLPPAHYETLRYLMIHLKKVTM 415
R+L PV+TY + + + AAK N D RL A+H ++ LP + E L L+ HL V
Sbjct: 453 LRNLSEPVMTYRLHKELVSAAKSDNLDYRLGAIHSLVYKLPEKNREMLELLIRHLVNVCE 512
Query: 416 NEKDNFMNAENLGIVFGPTLMRPPEDSTLTTLHDMRYQKLIVQILIEN 463
+ K+N M N+G++FGPTLMR ED T+ + ++++Q ++V+ILIE+
Sbjct: 513 HSKENLMTPSNMGVIFGPTLMRAQED-TVAAMMNIKFQNIVVEILIEH 559
>gi|71834863 Rho GTPase activating protein 5 isoform a [Homo sapiens]
Length = 1502
Score = 122 bits (305), Expect = 9e-28
Identities = 67/172 (38%), Positives = 99/172 (57%), Gaps = 6/172 (3%)
Query: 291 PMVVDICIREIEARGLKSEGLYRVSGFTEHIEDVKMAFDRDGEKADISANVYPDINIITG 350
P+ V+ C+ IE GL +EGLYRVSG ++++ FD+D +S V +N + G
Sbjct: 1275 PLFVEKCVEFIEDTGLCTEGLYRVSGNKTDQDNIQKQFDQDHNINLVSMEV--TVNAVAG 1332
Query: 351 ALKLYFRDLPIPVITYDTYSKFIDAAKISNADERLEAVHEVLMLLPPAHYETLRYLMIHL 410
ALK +F DLP P+I Y + + ++AAKI + ERL A+ E++ P +Y+ RY++ HL
Sbjct: 1333 ALKAFFADLPDPLIPYSLHPELLEAAKIPDKTERLHALKEIVKKFHPVNYDVFRYVITHL 1392
Query: 411 KKVTMNEKDNFMNAENLGIVFGPTLMRPP----EDSTLTTLHDMRYQKLIVQ 458
+V+ K N M A+NL I F PTLMRP E + T +H + I Q
Sbjct: 1393 NRVSQQHKINLMTADNLSICFWPTLMRPDFENREFLSTTKIHQSVVETFIQQ 1444
>gi|71834861 Rho GTPase activating protein 5 isoform b [Homo sapiens]
Length = 1501
Score = 122 bits (305), Expect = 9e-28
Identities = 67/172 (38%), Positives = 99/172 (57%), Gaps = 6/172 (3%)
Query: 291 PMVVDICIREIEARGLKSEGLYRVSGFTEHIEDVKMAFDRDGEKADISANVYPDINIITG 350
P+ V+ C+ IE GL +EGLYRVSG ++++ FD+D +S V +N + G
Sbjct: 1274 PLFVEKCVEFIEDTGLCTEGLYRVSGNKTDQDNIQKQFDQDHNINLVSMEV--TVNAVAG 1331
Query: 351 ALKLYFRDLPIPVITYDTYSKFIDAAKISNADERLEAVHEVLMLLPPAHYETLRYLMIHL 410
ALK +F DLP P+I Y + + ++AAKI + ERL A+ E++ P +Y+ RY++ HL
Sbjct: 1332 ALKAFFADLPDPLIPYSLHPELLEAAKIPDKTERLHALKEIVKKFHPVNYDVFRYVITHL 1391
Query: 411 KKVTMNEKDNFMNAENLGIVFGPTLMRPP----EDSTLTTLHDMRYQKLIVQ 458
+V+ K N M A+NL I F PTLMRP E + T +H + I Q
Sbjct: 1392 NRVSQQHKINLMTADNLSICFWPTLMRPDFENREFLSTTKIHQSVVETFIQQ 1443
>gi|134304853 PTPL1-associated RhoGAP 1 [Homo sapiens]
Length = 1261
Score = 120 bits (301), Expect = 3e-27
Identities = 89/302 (29%), Positives = 141/302 (46%), Gaps = 47/302 (15%)
Query: 195 SLVRRAALTHNDNHFNYEKTHNFKVHTFRGPHWCEYCANFMWGLIAQGVRCSDCGLNVHK 254
+L+ +AALTH K R P C C + + QGV C +C L H+
Sbjct: 604 TLMSKAALTH-------------KFRKLRSPTKCRDCEGIV---VFQGVECEECLLVCHR 647
Query: 255 QCSKHVPNDC-QPDLKRIKKVYCCDLTTLVKAHNTQRPMVVDICIREIEARGLKSEGLYR 313
+C +++ C L ++ + T + K P ++ IC EIE R L +G+YR
Sbjct: 648 KCLENLVIICGHQKLPGKIHLFGAEFTQVAKKEPDGIPFILKICASEIENRALCLQGIYR 707
Query: 314 VSGFTEHIEDVKMAFDRDGEKADISANVYPDINIITGALKLYFRDLPIPVITYDTYSKFI 373
V G E + A + DIS DI LKLY R LP P I + Y +FI
Sbjct: 708 VCGNKIKTEKLCQALENGMHLVDISEFSSHDI---CDVLKLYLRQLPEPFILFRLYKEFI 764
Query: 374 DAAK-ISNADERLEAVH-----------------------EVLMLLPPAHYETLRYLMIH 409
D AK I + +E E ++L LP +++ +L +L++H
Sbjct: 765 DLAKEIQHVNEEQETKKNSLEDKKWPNMCIEINRILLKSKDLLRQLPASNFNSLHFLIVH 824
Query: 410 LKKVTMNEKDNFMNAENLGIVFGPTLMRPPEDS---TLTTLHDMRYQKLIVQILIENEDV 466
LK+V + ++N MN++NLG++FGP+L+RP + T+++L + Q +V+ LI
Sbjct: 825 LKRVVDHAEENKMNSKNLGVIFGPSLIRPRPTTAPITISSLAEYSNQARLVEFLITYSQK 884
Query: 467 LF 468
+F
Sbjct: 885 IF 886
>gi|218083800 Rho GTPase-activating protein isoform 1 [Homo sapiens]
Length = 2087
Score = 120 bits (300), Expect = 3e-27
Identities = 70/203 (34%), Positives = 112/203 (55%), Gaps = 8/203 (3%)
Query: 272 KKVYCCDLTTLVKAHNTQRPMVVDICIREIEARGLKSEGLYRVSGFTEHIEDVKMAFDRD 331
++V+ CDL + + P V+ C IE G+ +G+YR+SG +I+ ++ FD +
Sbjct: 367 ERVFGCDLGEHLLNSGFEVPQVLQSCTAFIERYGIV-DGIYRLSGVASNIQRLRHEFDSE 425
Query: 332 GEKADISANVY-PDINIITGALKLYFRDLPIPVITYDTYSKFIDAAKISNADERLEAVHE 390
D++ Y DI+ + KLYFR+LP P++TY Y KF DA + +ERL +H+
Sbjct: 426 -HVPDLTKEPYVQDIHSVGSLCKLYFRELPNPLLTYQLYEKFSDAVSAATDEERLIKIHD 484
Query: 391 VLMLLPPAHYETLRYLMIHLKKVTMNEKDNFMNAENLGIVFGPTLMRPPE-----DSTLT 445
V+ LPP HY TL +LM HL + M+A+NL IV+ P L+R + S
Sbjct: 485 VIQQLPPPHYRTLEFLMRHLSLLADYCSITNMHAKNLAIVWAPNLLRSKQIESACFSGTA 544
Query: 446 TLHDMRYQKLIVQILIENEDVLF 468
++R Q ++V+ ++ + DVLF
Sbjct: 545 AFMEVRIQSVVVEFILNHVDVLF 567
>gi|29469071 Rho GTPase-activating protein isoform 2 [Homo sapiens]
Length = 1738
Score = 120 bits (300), Expect = 3e-27
Identities = 70/203 (34%), Positives = 112/203 (55%), Gaps = 8/203 (3%)
Query: 272 KKVYCCDLTTLVKAHNTQRPMVVDICIREIEARGLKSEGLYRVSGFTEHIEDVKMAFDRD 331
++V+ CDL + + P V+ C IE G+ +G+YR+SG +I+ ++ FD +
Sbjct: 18 ERVFGCDLGEHLLNSGFEVPQVLQSCTAFIERYGIV-DGIYRLSGVASNIQRLRHEFDSE 76
Query: 332 GEKADISANVY-PDINIITGALKLYFRDLPIPVITYDTYSKFIDAAKISNADERLEAVHE 390
D++ Y DI+ + KLYFR+LP P++TY Y KF DA + +ERL +H+
Sbjct: 77 -HVPDLTKEPYVQDIHSVGSLCKLYFRELPNPLLTYQLYEKFSDAVSAATDEERLIKIHD 135
Query: 391 VLMLLPPAHYETLRYLMIHLKKVTMNEKDNFMNAENLGIVFGPTLMRPPE-----DSTLT 445
V+ LPP HY TL +LM HL + M+A+NL IV+ P L+R + S
Sbjct: 136 VIQQLPPPHYRTLEFLMRHLSLLADYCSITNMHAKNLAIVWAPNLLRSKQIESACFSGTA 195
Query: 446 TLHDMRYQKLIVQILIENEDVLF 468
++R Q ++V+ ++ + DVLF
Sbjct: 196 AFMEVRIQSVVVEFILNHVDVLF 218
>gi|122939147 Rho GTPase activating protein 9 isoform 1 [Homo
sapiens]
Length = 731
Score = 119 bits (299), Expect = 5e-27
Identities = 68/213 (31%), Positives = 116/213 (54%), Gaps = 18/213 (8%)
Query: 273 KVYCCDLTTLVKAHNTQRPMVVDICIREIEARGLKSEGLYRVSGFTEHIEDVKMAFDR-- 330
+V+ C L +L + P + +CI ++ RGL +G+YRVSG ++ ++ DR
Sbjct: 519 QVFGCQLESLCQREGDTVPSFLRLCIAAVDKRGLDVDGIYRVSGNLAVVQKLRFLVDRER 578
Query: 331 ----DGE-----------KADISANVYPDINIITGALKLYFRDLPIPVITYDTYSKFIDA 375
DG + D+ + + DI+++TGALKL+ R+LP P++ F A
Sbjct: 579 AVTSDGRYVFPEQPGQEGRLDLDSTEWDDIHVVTGALKLFLRELPQPLVPPLLLPHFRAA 638
Query: 376 AKISNADERLEAVHEVLMLLPPAHYETLRYLMIHLKKVTMNEKDNFMNAENLGIVFGPTL 435
+S +++ L + E++ +P +++TLRYL+ HL +V + N M NLGIVFGPTL
Sbjct: 639 LALSESEQCLSQIQELIGSMPKPNHDTLRYLLEHLCRVIAHSDKNRMTPHNLGIVFGPTL 698
Query: 436 MRPPEDSTLTTLHDMRYQKLIVQILIENEDVLF 468
RP ++++ H + Y +VQ+++ N LF
Sbjct: 699 FRPEQETSDPAAHAL-YPGQLVQLMLTNFTSLF 730
>gi|122939149 Rho GTPase activating protein 9 isoform 3 [Homo
sapiens]
Length = 547
Score = 119 bits (299), Expect = 5e-27
Identities = 68/213 (31%), Positives = 116/213 (54%), Gaps = 18/213 (8%)
Query: 273 KVYCCDLTTLVKAHNTQRPMVVDICIREIEARGLKSEGLYRVSGFTEHIEDVKMAFDR-- 330
+V+ C L +L + P + +CI ++ RGL +G+YRVSG ++ ++ DR
Sbjct: 335 QVFGCQLESLCQREGDTVPSFLRLCIAAVDKRGLDVDGIYRVSGNLAVVQKLRFLVDRER 394
Query: 331 ----DGE-----------KADISANVYPDINIITGALKLYFRDLPIPVITYDTYSKFIDA 375
DG + D+ + + DI+++TGALKL+ R+LP P++ F A
Sbjct: 395 AVTSDGRYVFPEQPGQEGRLDLDSTEWDDIHVVTGALKLFLRELPQPLVPPLLLPHFRAA 454
Query: 376 AKISNADERLEAVHEVLMLLPPAHYETLRYLMIHLKKVTMNEKDNFMNAENLGIVFGPTL 435
+S +++ L + E++ +P +++TLRYL+ HL +V + N M NLGIVFGPTL
Sbjct: 455 LALSESEQCLSQIQELIGSMPKPNHDTLRYLLEHLCRVIAHSDKNRMTPHNLGIVFGPTL 514
Query: 436 MRPPEDSTLTTLHDMRYQKLIVQILIENEDVLF 468
RP ++++ H + Y +VQ+++ N LF
Sbjct: 515 FRPEQETSDPAAHAL-YPGQLVQLMLTNFTSLF 546
>gi|186928844 Cdc42 GTPase-activating protein [Homo sapiens]
Length = 1444
Score = 118 bits (295), Expect = 1e-26
Identities = 66/206 (32%), Positives = 110/206 (53%), Gaps = 8/206 (3%)
Query: 269 KRIKKVYCCDLTTLVKAHNTQRPMVVDICIREIEARGLKSEGLYRVSGFTEHIEDVKMAF 328
K + CDLT +++ P V+ C IE G+ +G+YR+SG T +I+ ++ F
Sbjct: 13 KGAASAFGCDLTEYLESSGQDVPYVLKSCAEFIETHGIV-DGIYRLSGVTSNIQRLRQEF 71
Query: 329 DRDGEKADISANVY-PDINIITGALKLYFRDLPIPVITYDTYSKFIDAAKISNADERLEA 387
D + D++ VY DI+ + KLYFR+LP P++TY+ Y KF +A + +L
Sbjct: 72 GSD-QCPDLTREVYLQDIHCVGSLCKLYFRELPNPLLTYELYEKFTEAVSHCPEEGQLAR 130
Query: 388 VHEVLMLLPPAHYETLRYLMIHLKKVTMNEKDNFMNAENLGIVFGPTLMRPPEDSTLTTL 447
+ V+ LPP+HY TL YL+ HL + M+A NL +V+ P L+R E
Sbjct: 131 IQNVIQELPPSHYRTLEYLIRHLAHIASFSSKTNMHARNLALVWAPNLLRSKEIEATGCN 190
Query: 448 HD-----MRYQKLIVQILIENEDVLF 468
D +R Q+++++ ++ + D +F
Sbjct: 191 GDAAFLAVRVQQVVIEFILNHVDQIF 216
>gi|82546845 breakpoint cluster region isoform 2 [Homo sapiens]
Length = 1227
Score = 117 bits (293), Expect = 2e-26
Identities = 62/167 (37%), Positives = 95/167 (56%), Gaps = 1/167 (0%)
Query: 274 VYCCDLTTLVKAHNTQRPMVVDICIREIEARGLKSEGLYRVSGFTEHIEDVKMAFDRDGE 333
V+ + + K ++ P +V C+ EIE RG++ G+YRVSG I+ +K AFD + +
Sbjct: 1007 VFGVKIAVVTKRERSKVPYIVRQCVEEIERRGMEEVGIYRVSGVATDIQALKAAFDVNNK 1066
Query: 334 KADISANVYPDINIITGALKLYFRDLPIPVITYDTYSKFIDAAKISNADERLEAVHEVLM 393
+ + D+N I G LKLYFR+LP P+ T + Y F + +S+ + + +L+
Sbjct: 1067 DVSVMMSEM-DVNAIAGTLKLYFRELPEPLFTDEFYPNFAEGIALSDPVAKESCMLNLLL 1125
Query: 394 LLPPAHYETLRYLMIHLKKVTMNEKDNFMNAENLGIVFGPTLMRPPE 440
LP A+ T +L+ HLK+V E N M+ NL VFGPTL+RP E
Sbjct: 1126 SLPEANLLTFLFLLDHLKRVAEKEAVNKMSLHNLATVFGPTLLRPSE 1172
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.136 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,759,383
Number of Sequences: 37866
Number of extensions: 793759
Number of successful extensions: 3081
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 189
Number of HSP's successfully gapped in prelim test: 110
Number of HSP's that attempted gapping in prelim test: 2614
Number of HSP's gapped (non-prelim): 401
length of query: 468
length of database: 18,247,518
effective HSP length: 106
effective length of query: 362
effective length of database: 14,233,722
effective search space: 5152607364
effective search space used: 5152607364
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.