Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 4757766
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4757766 Rho GTPase activating protein 1 [Homo sapiens]
(439 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4757766 Rho GTPase activating protein 1 [Homo sapiens] 890 0.0
gi|226423858 PRR5-ARHGAP8 fusion protein [Homo sapiens] 457 e-129
gi|66346660 Rho GTPase activating protein 8 isoform 2 [Homo sapi... 457 e-129
gi|66346662 Rho GTPase activating protein 8 isoform 1 [Homo sapi... 441 e-124
gi|168480080 BCL2/adenovirus E1B 19kD interacting protein 2 [Hom... 119 7e-27
gi|56119110 family with sequence similarity 13, member A1 isofor... 116 5e-26
gi|34013590 Rho GTPase activating protein 2 [Homo sapiens] 112 7e-25
gi|162287219 prune homolog 2 [Homo sapiens] 111 1e-24
gi|156119615 myosin IXA [Homo sapiens] 108 1e-23
gi|21314774 T-cell activation Rho GTPase-activating protein isof... 106 5e-23
gi|51479148 Rho GTPase activating protein 20 [Homo sapiens] 106 5e-23
gi|29336043 caytaxin [Homo sapiens] 105 1e-22
gi|85815829 SH3-domain binding protein 1 [Homo sapiens] 101 1e-21
gi|24307967 SLIT-ROBO Rho GTPase activating protein 3 isoform a ... 100 3e-21
gi|228008343 BCL2/adenovirus E1B 19kD interacting protein like i... 99 6e-21
gi|109715844 BCL2/adenovirus E1B 19kD interacting protein like i... 99 6e-21
gi|20270373 T-cell activation Rho GTPase-activating protein isof... 99 6e-21
gi|224458284 Rho GTPase activating protein 23 [Homo sapiens] 98 2e-20
gi|111154090 Rho GTPase activating protein 24 isoform 3 [Homo sa... 98 2e-20
gi|111154099 Rho GTPase activating protein 24 isoform 2 [Homo sa... 98 2e-20
gi|111154092 Rho GTPase activating protein 24 isoform 1 [Homo sa... 98 2e-20
gi|7382480 Rho GTPase activating protein 6 isoform 4 [Homo sapiens] 98 2e-20
gi|95091988 Rho GTPase activating protein 6 isoform 3 [Homo sapi... 98 2e-20
gi|95091875 Rho GTPase activating protein 6 isoform 1 [Homo sapi... 98 2e-20
gi|54860079 nadrin isoform 1 [Homo sapiens] 96 5e-20
gi|54860105 nadrin isoform 2 [Homo sapiens] 96 5e-20
gi|150417981 glucocorticoid receptor DNA binding factor 1 [Homo ... 95 1e-19
gi|156142190 hypothetical protein LOC51306 isoform 2 [Homo sapiens] 95 1e-19
gi|156142188 hypothetical protein LOC51306 isoform 1 [Homo sapiens] 95 1e-19
gi|122939147 Rho GTPase activating protein 9 isoform 1 [Homo sap... 95 1e-19
>gi|4757766 Rho GTPase activating protein 1 [Homo sapiens]
Length = 439
Score = 890 bits (2300), Expect = 0.0
Identities = 439/439 (100%), Positives = 439/439 (100%)
Query: 1 MDPLSELQDDLTLDDTSEALNQLKLASIDEKNWPSDEMPDFPKSDDSKSSSPELVTHLKW 60
MDPLSELQDDLTLDDTSEALNQLKLASIDEKNWPSDEMPDFPKSDDSKSSSPELVTHLKW
Sbjct: 1 MDPLSELQDDLTLDDTSEALNQLKLASIDEKNWPSDEMPDFPKSDDSKSSSPELVTHLKW 60
Query: 61 DDPYYDIARHQIVEVAGDDKYGRKIIVFSACRMPPSHQLDHSKLLGYLKHTLDQYVESDY 120
DDPYYDIARHQIVEVAGDDKYGRKIIVFSACRMPPSHQLDHSKLLGYLKHTLDQYVESDY
Sbjct: 61 DDPYYDIARHQIVEVAGDDKYGRKIIVFSACRMPPSHQLDHSKLLGYLKHTLDQYVESDY 120
Query: 121 TLLYLHHGLTSDNKPSLSWLRDAYREFDRKYKKNIKALYIVHPTMFIKTLLILFKPLISF 180
TLLYLHHGLTSDNKPSLSWLRDAYREFDRKYKKNIKALYIVHPTMFIKTLLILFKPLISF
Sbjct: 121 TLLYLHHGLTSDNKPSLSWLRDAYREFDRKYKKNIKALYIVHPTMFIKTLLILFKPLISF 180
Query: 181 KFGQKIFYVNYLSELSEHVKLEQLGIPRQVLKYDDFLKSTQKSPATAPKPMPPRPPLPNQ 240
KFGQKIFYVNYLSELSEHVKLEQLGIPRQVLKYDDFLKSTQKSPATAPKPMPPRPPLPNQ
Sbjct: 181 KFGQKIFYVNYLSELSEHVKLEQLGIPRQVLKYDDFLKSTQKSPATAPKPMPPRPPLPNQ 240
Query: 241 QFGVSLQHLQEKNPEQEPIPIVLRETVAYLQAHALTTEGIFRRSANTQVVREVQQKYNMG 300
QFGVSLQHLQEKNPEQEPIPIVLRETVAYLQAHALTTEGIFRRSANTQVVREVQQKYNMG
Sbjct: 241 QFGVSLQHLQEKNPEQEPIPIVLRETVAYLQAHALTTEGIFRRSANTQVVREVQQKYNMG 300
Query: 301 LPVDFDQYNELHLPAVILKTFLRELPEPLLTFDLYPHVVGFLNIDESQRVPATLQVLQTL 360
LPVDFDQYNELHLPAVILKTFLRELPEPLLTFDLYPHVVGFLNIDESQRVPATLQVLQTL
Sbjct: 301 LPVDFDQYNELHLPAVILKTFLRELPEPLLTFDLYPHVVGFLNIDESQRVPATLQVLQTL 360
Query: 361 PEENYQVLRFLTAFLVQISAHSDQNKMTNTNLAVVFGPNLLWAKDAAITLKAINPINTFT 420
PEENYQVLRFLTAFLVQISAHSDQNKMTNTNLAVVFGPNLLWAKDAAITLKAINPINTFT
Sbjct: 361 PEENYQVLRFLTAFLVQISAHSDQNKMTNTNLAVVFGPNLLWAKDAAITLKAINPINTFT 420
Query: 421 KFLLDHQGELFPSPDPSGL 439
KFLLDHQGELFPSPDPSGL
Sbjct: 421 KFLLDHQGELFPSPDPSGL 439
>gi|226423858 PRR5-ARHGAP8 fusion protein [Homo sapiens]
Length = 555
Score = 457 bits (1177), Expect = e-129
Identities = 219/382 (57%), Positives = 286/382 (74%), Gaps = 2/382 (0%)
Query: 58 LKWDDPYYDIARHQIVEVAGDDKYGRKIIVFSACRMPPSHQLDHSKLLGYLKHTLDQYVE 117
L P+YD+ARH I++VAGDD++GR+++ FS CRMPPSH+LDH +LL YLK+TLDQYVE
Sbjct: 130 LSTSHPFYDVARHGILQVAGDDRFGRRVVTFSCCRMPPSHELDHQRLLEYLKYTLDQYVE 189
Query: 118 SDYTLLYLHHGLTSDNKPSLSWLRDAYREFDRKYKKNIKALYIVHPTMFIKTLLILFKPL 177
+DYT++Y H+GL S NKPSL WL+ AY+EFDRKYKKN+KALY+VHPT FIK L + KPL
Sbjct: 190 NDYTIVYFHYGLNSRNKPSLGWLQSAYKEFDRKYKKNLKALYVVHPTSFIKVLWNILKPL 249
Query: 178 ISFKFGQKIFYVNYLSELSEHVKLEQLGIPRQVLKYDDFLKSTQKSPATAP-KPMPPRPP 236
IS KFG+K+ Y NYLSEL EH+K +QL IP +VL+YD+ L+S + P K PPRPP
Sbjct: 250 ISHKFGKKVIYFNYLSELHEHLKYDQLVIPPEVLRYDEKLQSLHEGRTPPPTKTPPPRPP 309
Query: 237 LPNQQFGVSLQHLQEKNPEQEPIPIVLRETVAYLQAHALTTEGIFRRSANTQVVREVQQK 296
LP QQFGVSLQ+L++KN + E IP VLR TV YL+ L TEG+FRRSA+ Q VRE+Q+
Sbjct: 310 LPTQQFGVSLQYLKDKN-QGELIPPVLRFTVTYLREKGLRTEGLFRRSASVQTVREIQRL 368
Query: 297 YNMGLPVDFDQYNELHLPAVILKTFLRELPEPLLTFDLYPHVVGFLNIDESQRVPATLQV 356
YN G PV+FD Y ++H+PAVILKTFLRELP+PLLTF Y ++G ++ S RV Q+
Sbjct: 369 YNQGKPVNFDDYGDIHIPAVILKTFLRELPQPLLTFQAYEQILGITCVESSLRVTGCRQI 428
Query: 357 LQTLPEENYQVLRFLTAFLVQISAHSDQNKMTNTNLAVVFGPNLLWAKDAAITLKAINPI 416
L++LPE NY VLR+L FL +S S NKM ++NLA VFG NL+W +L A+ P+
Sbjct: 429 LRSLPEHNYVVLRYLMGFLHAVSRESIFNKMNSSNLACVFGLNLIWPSQGVSSLSALVPL 488
Query: 417 NTFTKFLLDHQGELFPSPDPSG 438
N FT+ L+++ ++F +P+ G
Sbjct: 489 NMFTELLIEYYEKIFSTPEAPG 510
>gi|66346660 Rho GTPase activating protein 8 isoform 2 [Homo
sapiens]
Length = 433
Score = 457 bits (1177), Expect = e-129
Identities = 219/382 (57%), Positives = 286/382 (74%), Gaps = 2/382 (0%)
Query: 58 LKWDDPYYDIARHQIVEVAGDDKYGRKIIVFSACRMPPSHQLDHSKLLGYLKHTLDQYVE 117
L P+YD+ARH I++VAGDD++GR+++ FS CRMPPSH+LDH +LL YLK+TLDQYVE
Sbjct: 8 LSTSHPFYDVARHGILQVAGDDRFGRRVVTFSCCRMPPSHELDHQRLLEYLKYTLDQYVE 67
Query: 118 SDYTLLYLHHGLTSDNKPSLSWLRDAYREFDRKYKKNIKALYIVHPTMFIKTLLILFKPL 177
+DYT++Y H+GL S NKPSL WL+ AY+EFDRKYKKN+KALY+VHPT FIK L + KPL
Sbjct: 68 NDYTIVYFHYGLNSRNKPSLGWLQSAYKEFDRKYKKNLKALYVVHPTSFIKVLWNILKPL 127
Query: 178 ISFKFGQKIFYVNYLSELSEHVKLEQLGIPRQVLKYDDFLKSTQKSPATAP-KPMPPRPP 236
IS KFG+K+ Y NYLSEL EH+K +QL IP +VL+YD+ L+S + P K PPRPP
Sbjct: 128 ISHKFGKKVIYFNYLSELHEHLKYDQLVIPPEVLRYDEKLQSLHEGRTPPPTKTPPPRPP 187
Query: 237 LPNQQFGVSLQHLQEKNPEQEPIPIVLRETVAYLQAHALTTEGIFRRSANTQVVREVQQK 296
LP QQFGVSLQ+L++KN + E IP VLR TV YL+ L TEG+FRRSA+ Q VRE+Q+
Sbjct: 188 LPTQQFGVSLQYLKDKN-QGELIPPVLRFTVTYLREKGLRTEGLFRRSASVQTVREIQRL 246
Query: 297 YNMGLPVDFDQYNELHLPAVILKTFLRELPEPLLTFDLYPHVVGFLNIDESQRVPATLQV 356
YN G PV+FD Y ++H+PAVILKTFLRELP+PLLTF Y ++G ++ S RV Q+
Sbjct: 247 YNQGKPVNFDDYGDIHIPAVILKTFLRELPQPLLTFQAYEQILGITCVESSLRVTGCRQI 306
Query: 357 LQTLPEENYQVLRFLTAFLVQISAHSDQNKMTNTNLAVVFGPNLLWAKDAAITLKAINPI 416
L++LPE NY VLR+L FL +S S NKM ++NLA VFG NL+W +L A+ P+
Sbjct: 307 LRSLPEHNYVVLRYLMGFLHAVSRESIFNKMNSSNLACVFGLNLIWPSQGVSSLSALVPL 366
Query: 417 NTFTKFLLDHQGELFPSPDPSG 438
N FT+ L+++ ++F +P+ G
Sbjct: 367 NMFTELLIEYYEKIFSTPEAPG 388
>gi|66346662 Rho GTPase activating protein 8 isoform 1 [Homo
sapiens]
Length = 464
Score = 441 bits (1135), Expect = e-124
Identities = 219/413 (53%), Positives = 286/413 (69%), Gaps = 33/413 (7%)
Query: 58 LKWDDPYYDIARHQIVEVAGDDKYGRKIIVFSACRMPPSHQLDHSKLLGYLKHTLDQYVE 117
L P+YD+ARH I++VAGDD++GR+++ FS CRMPPSH+LDH +LL YLK+TLDQYVE
Sbjct: 8 LSTSHPFYDVARHGILQVAGDDRFGRRVVTFSCCRMPPSHELDHQRLLEYLKYTLDQYVE 67
Query: 118 SDYTLLYLHHGLTSDNKPSLSWLRDAYREFDRK--------------------------- 150
+DYT++Y H+GL S NKPSL WL+ AY+EFDRK
Sbjct: 68 NDYTIVYFHYGLNSRNKPSLGWLQSAYKEFDRKDGDLTMWPRLVSNSKLKRSSHLSLPKY 127
Query: 151 ----YKKNIKALYIVHPTMFIKTLLILFKPLISFKFGQKIFYVNYLSELSEHVKLEQLGI 206
YKKN+KALY+VHPT FIK L + KPLIS KFG+K+ Y NYLSEL EH+K +QL I
Sbjct: 128 WDYRYKKNLKALYVVHPTSFIKVLWNILKPLISHKFGKKVIYFNYLSELHEHLKYDQLVI 187
Query: 207 PRQVLKYDDFLKSTQKSPATAP-KPMPPRPPLPNQQFGVSLQHLQEKNPEQEPIPIVLRE 265
P +VL+YD+ L+S + P K PPRPPLP QQFGVSLQ+L++KN + E IP VLR
Sbjct: 188 PPEVLRYDEKLQSLHEGRTPPPTKTPPPRPPLPTQQFGVSLQYLKDKN-QGELIPPVLRF 246
Query: 266 TVAYLQAHALTTEGIFRRSANTQVVREVQQKYNMGLPVDFDQYNELHLPAVILKTFLREL 325
TV YL+ L TEG+FRRSA+ Q VRE+Q+ YN G PV+FD Y ++H+PAVILKTFLREL
Sbjct: 247 TVTYLREKGLRTEGLFRRSASVQTVREIQRLYNQGKPVNFDDYGDIHIPAVILKTFLREL 306
Query: 326 PEPLLTFDLYPHVVGFLNIDESQRVPATLQVLQTLPEENYQVLRFLTAFLVQISAHSDQN 385
P+PLLTF Y ++G ++ S RV Q+L++LPE NY VLR+L FL +S S N
Sbjct: 307 PQPLLTFQAYEQILGITCVESSLRVTGCRQILRSLPEHNYVVLRYLMGFLHAVSRESIFN 366
Query: 386 KMTNTNLAVVFGPNLLWAKDAAITLKAINPINTFTKFLLDHQGELFPSPDPSG 438
KM ++NLA VFG NL+W +L A+ P+N FT+ L+++ ++F +P+ G
Sbjct: 367 KMNSSNLACVFGLNLIWPSQGVSSLSALVPLNMFTELLIEYYEKIFSTPEAPG 419
>gi|168480080 BCL2/adenovirus E1B 19kD interacting protein 2 [Homo
sapiens]
Length = 435
Score = 119 bits (297), Expect = 7e-27
Identities = 79/226 (34%), Positives = 118/226 (52%), Gaps = 18/226 (7%)
Query: 6 ELQDDLTLDDTSEALNQLKLASIDEKNWPSDEMPDFPKSDDSKSSSPELVTHLKWDDPYY 65
E +DDL T+E + + SI E ++E D + + + +K +PY
Sbjct: 217 EWEDDLPKPKTTEVIRK---GSITEYT-AAEEKEDGRRWRMFRIGEQDHRVDMKAIEPYK 272
Query: 66 DIARHQIVEVAGDDKYG---RKIIVFSACRMPPSHQLDHSKLLG----YLKHTLDQYVES 118
+ H YG I+VF+ C MP S Q ++ L+ Y+ TL+ V
Sbjct: 273 KVISH-------GGYYGDGLNAIVVFAVCFMPESSQPNYRYLMDNLFKYVIGTLELLVAE 325
Query: 119 DYTLLYLHHGLTSDNKPSLSWLRDAYREFDRKYKKNIKALYIVHPTMFIKTLLILFKPLI 178
+Y ++YL+ T PSL WLR Y++ DR+ +KN+K+L IVHP+ FI+TLL + +P I
Sbjct: 326 NYMIVYLNGATTRRKMPSLGWLRKCYQQIDRRLRKNLKSLIIVHPSWFIRTLLAVTRPFI 385
Query: 179 SFKFGQKIFYVNYLSELSEHVKLEQLGIPRQVLKYDDFLKSTQKSP 224
S KF QKI YV L+EL+E V +E +GIP + + D L Q P
Sbjct: 386 SSKFSQKIRYVFNLAELAELVPMEYVGIPECIKQVDQELNGKQDEP 431
>gi|56119110 family with sequence similarity 13, member A1 isoform a
[Homo sapiens]
Length = 1023
Score = 116 bits (290), Expect = 5e-26
Identities = 65/191 (34%), Positives = 106/191 (55%), Gaps = 1/191 (0%)
Query: 242 FGVSLQHLQEKNPEQEPIPIVLRETVAYLQAHALTTEGIFRRSANTQVVREVQQKYNMGL 301
FGVSLQ L+ + + IP V+ V YL H LT EG+FR + N +VV +++ K+ G+
Sbjct: 41 FGVSLQELERQGLTENGIPAVVWNIVEYLTQHGLTQEGLFRVNGNVKVVEQLRLKFESGV 100
Query: 302 PVDFDQYNELHLPAVILKTFLRELPEPLLTFDLYPHVVGFLNIDESQRVPATLQ-VLQTL 360
PV+ + ++ A +LK FLRELP+ L+T L P + + ++L+ +++ L
Sbjct: 101 PVELGKDGDVCSAASLLKLFLRELPDSLITSALQPRFIQLFQDGRNDVQESSLRDLIKEL 160
Query: 361 PEENYQVLRFLTAFLVQISAHSDQNKMTNTNLAVVFGPNLLWAKDAAITLKAINPINTFT 420
P+ +Y +L++L FL +++ H QN+M NLA VFGPN +K + N
Sbjct: 161 PDTHYCLLKYLCQFLTKVAKHHVQNRMNVHNLATVFGPNCFHVPPGLEGMKEQDLCNKIM 220
Query: 421 KFLLDHQGELF 431
+L++ LF
Sbjct: 221 AKILENYNTLF 231
>gi|34013590 Rho GTPase activating protein 2 [Homo sapiens]
Length = 698
Score = 112 bits (280), Expect = 7e-25
Identities = 65/210 (30%), Positives = 108/210 (51%), Gaps = 7/210 (3%)
Query: 236 PLPNQQFGVSLQHLQEKNPEQEP--IPIVLRETVAYLQAHALTTEGIFRRSANTQVVREV 293
PL FG L+ + P P+++ + V +++ LT EG+FR +VR++
Sbjct: 147 PLGGGIFGQRLEETVHHERKYGPRLAPLLVEQCVDFIRERGLTEEGLFRMPGQANLVRDL 206
Query: 294 QQKYNMGLPVDFDQYNELHLPAVILKTFLRELPEPLLTFDLYPHVVG---FLNIDESQRV 350
Q ++ G FD ++H A +LK +LRELPEP++ F Y + L DE +
Sbjct: 207 QDSFDCGEKPLFDSTTDVHTVASLLKLYLRELPEPVVPFARYEDFLSCAQLLTKDEGEGT 266
Query: 351 PATLQVLQTLPEENYQVLRFLTAFLVQISAHSDQNKMTNTNLAVVFGPNLL--WAKDAAI 408
+ + LP+ NY +LR++ FL ++ A+S+ NKM+ NLA VFGPN+L +D
Sbjct: 267 LELAKQVSNLPQANYNLLRYICKFLDEVQAYSNVNKMSVQNLATVFGPNILRPQVEDPVT 326
Query: 409 TLKAINPINTFTKFLLDHQGELFPSPDPSG 438
++ + + L+ +LF +P P G
Sbjct: 327 IMEGTSLVQHLMTVLIRKHSQLFTAPVPEG 356
>gi|162287219 prune homolog 2 [Homo sapiens]
Length = 3088
Score = 111 bits (277), Expect = 1e-24
Identities = 56/147 (38%), Positives = 88/147 (59%), Gaps = 4/147 (2%)
Query: 85 IIVFSACRMPPSHQLDH----SKLLGYLKHTLDQYVESDYTLLYLHHGLTSDNKPSLSWL 140
IIVF+AC +P S + D+ L Y+ TL+ V DY ++YL+ P L W+
Sbjct: 2919 IIVFAACFLPDSSRADYHYVMENLFLYVISTLELMVAEDYMIVYLNGATPRRRMPGLGWM 2978
Query: 141 RDAYREFDRKYKKNIKALYIVHPTMFIKTLLILFKPLISFKFGQKIFYVNYLSELSEHVK 200
+ Y+ DR+ +KN+K+ IVHP+ FI+T+L + +P IS KF KI YVN LSELS +
Sbjct: 2979 KKCYQMIDRRLRKNLKSFIIVHPSWFIRTILAVTRPFISSKFSSKIKYVNSLSELSGLIP 3038
Query: 201 LEQLGIPRQVLKYDDFLKSTQKSPATA 227
++ + IP ++K D+ L+ ++ T+
Sbjct: 3039 MDCIHIPESIIKLDEELREASEAAKTS 3065
>gi|156119615 myosin IXA [Homo sapiens]
Length = 2548
Score = 108 bits (269), Expect = 1e-23
Identities = 67/214 (31%), Positives = 112/214 (52%), Gaps = 8/214 (3%)
Query: 209 QVLKYDDFLKSTQKSPATAPKPMPPRPPLPNQQFGVSLQHLQEKNPEQEPIPIVLRETVA 268
++ KY K K+ A K P L ++QFGV L L E +P+V+ + +
Sbjct: 2030 KLCKYACHKKCCLKTTAKCSKKYDPE--LSSRQFGVELSRLTS---EDRTVPLVVEKLIN 2084
Query: 269 YLQAHALTTEGIFRRSANTQVVREVQQKYNMGL-PVDFDQYNELHLPAVILKTFLRELPE 327
Y++ H L TEGI+R+S +T ++E++Q + V+ D YN +H+ A + K +LR+LP
Sbjct: 2085 YIEMHGLYTEGIYRKSGSTNKIKELRQGLDTDAESVNLDDYN-IHVIASVFKQWLRDLPN 2143
Query: 328 PLLTFDLYPHVVGFLNIDE-SQRVPATLQVLQTLPEENYQVLRFLTAFLVQISAHSDQNK 386
PL+TF+LY + + + E + + V+ L + L L LV+I+ D N+
Sbjct: 2144 PLMTFELYEEFLRAMGLQERKETIRGVYSVIDQLSRTHLNTLERLIFHLVRIALQEDTNR 2203
Query: 387 MTNTNLAVVFGPNLLWAKDAAITLKAINPINTFT 420
M+ LA+VF P +L D L+++ I+ T
Sbjct: 2204 MSANALAIVFAPCILRCPDTTDPLQSVQDISKTT 2237
>gi|21314774 T-cell activation Rho GTPase-activating protein isoform
b [Homo sapiens]
Length = 731
Score = 106 bits (264), Expect = 5e-23
Identities = 64/183 (34%), Positives = 108/183 (59%), Gaps = 7/183 (3%)
Query: 255 EQEPIPIVLRETVAYLQAHALTTEGIFRRSANTQVVREVQQKYNMGLPVDFDQYNELHLP 314
+ + +P +++ + L +TEGIFRR+AN + +E++++ N G VD ++ +HL
Sbjct: 96 DSDTLPRPIQDILTILCLKGPSTEGIFRRAANEKARKELKEELNSGDAVDLERL-PVHLL 154
Query: 315 AVILKTFLRELPEPLLTFDLYPHVVGFLNI-DESQRVPATLQVLQTLPEENYQVLRFLTA 373
AV+ K FLR +P LL+ DL+ +G L + DE R+ A QV LP N +L+ L
Sbjct: 155 AVVFKDFLRSIPRKLLSSDLFEEWMGALEMQDEEDRIEALKQVADKLPRPNLLLLKHLVY 214
Query: 374 FLVQISAHSDQNKMTNTNLAVVFGPNLLWAK-DAAITLKA----INPINTFTKFLLDHQG 428
L IS +S+ N+M ++NLA+ GPN+L + D +++ +A N + T +FL+D+
Sbjct: 215 VLHLISKNSEVNRMDSSNLAICIGPNMLTLENDQSLSFEAQKDLNNKVKTLVEFLIDNCF 274
Query: 429 ELF 431
E+F
Sbjct: 275 EIF 277
>gi|51479148 Rho GTPase activating protein 20 [Homo sapiens]
Length = 1191
Score = 106 bits (264), Expect = 5e-23
Identities = 60/174 (34%), Positives = 97/174 (55%), Gaps = 6/174 (3%)
Query: 230 PMPPRPPLPNQQFGVSLQHLQEKNPEQEPIPIVLRETVAYLQAHALTTEGIFRRSANTQV 289
P P P+P Q FG+SL ++ E + +P+ + + +L T+GIFR+SAN +
Sbjct: 351 PSSPTSPMPGQLFGISLPNICENDNLPKPV----LDMLFFLNQKGPLTKGIFRQSANVKS 406
Query: 290 VREVQQKYNMGLPVDFDQYNELHLPAVILKTFLRELPEPLLTFDLYPHVVGFLNI-DESQ 348
RE+++K N G+ V D + + A +LK FLR +P + + DLY H V ++ ++ +
Sbjct: 407 CRELKEKLNSGVEVHLD-CESIFVIASVLKDFLRNIPGSIFSSDLYDHWVSVMDQGNDEE 465
Query: 349 RVPATLQVLQTLPEENYQVLRFLTAFLVQISAHSDQNKMTNTNLAVVFGPNLLW 402
++ ++L LP N +LR+L L I HS N+MT NLAV P++LW
Sbjct: 466 KINTVQRLLDQLPRANVVLLRYLFGVLHNIEQHSSSNQMTAFNLAVCVAPSILW 519
>gi|29336043 caytaxin [Homo sapiens]
Length = 371
Score = 105 bits (261), Expect = 1e-22
Identities = 58/155 (37%), Positives = 93/155 (60%), Gaps = 5/155 (3%)
Query: 85 IIVFSACRMPPSHQLDH----SKLLGYLKHTLDQYVESDYTLLYLHHGLTSDNKPSLSWL 140
IIVF+AC +P S D+ L Y+ +L+ V DY ++YL+ P + WL
Sbjct: 191 IIVFAACFLPDSSLPDYHYIMENLFLYVISSLELLVAEDYMIVYLNGATPRRRMPGIGWL 250
Query: 141 RDAYREFDRKYKKNIKALYIVHPTMFIKTLLILFKPLISFKFGQKIFYVNYLSELSEHVK 200
+ Y+ DR+ +KN+K+L IVHP+ FI+T+L + +P IS KF KI YV+ L +L + +
Sbjct: 251 KKCYQMIDRRLRKNLKSLIIVHPSWFIRTVLAISRPFISVKFINKIQYVHSLEDLEQLIP 310
Query: 201 LEQLGIPRQVLKY-DDFLKSTQKSPATAPKPMPPR 234
+E + IP VL+Y ++ LK+ ++S P+ + PR
Sbjct: 311 MEHVQIPDCVLQYEEERLKARRESARPQPEFVLPR 345
>gi|85815829 SH3-domain binding protein 1 [Homo sapiens]
Length = 701
Score = 101 bits (252), Expect = 1e-21
Identities = 63/164 (38%), Positives = 95/164 (57%), Gaps = 7/164 (4%)
Query: 242 FGVSLQ-HLQEKNPEQEPIPIVLRETVAYLQAHALTTEGIFRRSANTQVVREVQQKYNMG 300
+GVSL HLQE E I + + V L + + EG+FR +A V++ ++Q
Sbjct: 274 YGVSLATHLQELGRE---IALPIEACVMMLLSEGMKEEGLFRLAAGASVLKRLKQTMASD 330
Query: 301 LPVDFDQY-NELHLPAVILKTFLRELPEPLLTFDLYPHVVGFLNIDE-SQRVPATLQVLQ 358
P +++ ++ H A LK++LRELPEPL+TFDLY + ++ E R+ A +V
Sbjct: 331 -PHSLEEFCSDPHAVAGALKSYLRELPEPLMTFDLYDDWMRAASLKEPGARLQALQEVCS 389
Query: 359 TLPEENYQVLRFLTAFLVQISAHSDQNKMTNTNLAVVFGPNLLW 402
LP EN LR+L FL +++ + NKMT +N+A+V GPNLLW
Sbjct: 390 RLPPENLSNLRYLMKFLARLAEEQEVNKMTPSNIAIVLGPNLLW 433
>gi|24307967 SLIT-ROBO Rho GTPase activating protein 3 isoform a
[Homo sapiens]
Length = 1099
Score = 100 bits (249), Expect = 3e-21
Identities = 65/223 (29%), Positives = 109/223 (48%), Gaps = 10/223 (4%)
Query: 220 TQKSPATAPKPMPPRPPLP-----NQQFGVSLQHLQEKNPEQEPIPIVLRETVAYLQAHA 274
T + P PKP R P P ++ F S++ + + + IP+V+ + Y+ +
Sbjct: 477 TTRPPCLPPKPQKMRRPRPLSVYSHKLFNGSMEAFIKDSGQA--IPLVVESCIRYINLYG 534
Query: 275 LTTEGIFRRSANTQVVREVQQKYNMGLPVDFDQYNELHLPAV--ILKTFLRELPEPLLTF 332
L +GIFR + V +++ + G D NE + +V +LK + R L PL
Sbjct: 535 LQQQGIFRVPGSQVEVNDIKNSFERGEDPLVDDQNERDINSVAGVLKLYFRGLENPLFPK 594
Query: 333 DLYPHVVGFLNIDE-SQRVPATLQVLQTLPEENYQVLRFLTAFLVQISAHSDQNKMTNTN 391
+ + ++ + ++ ++RV Q+L TLP V+R+L AFL +S +SD+N M N
Sbjct: 595 ERFQDLISTIKLENPAERVHQIQQILVTLPRVVIVVMRYLFAFLNHLSQYSDENMMDPYN 654
Query: 392 LAVVFGPNLLWAKDAAITLKAINPINTFTKFLLDHQGELFPSP 434
LA+ FGP L+ D + IN K ++ H +FPSP
Sbjct: 655 LAICFGPTLMHIPDGQDPVSCQAHINEVIKTIIIHHEAIFPSP 697
>gi|228008343 BCL2/adenovirus E1B 19kD interacting protein like
isoform b [Homo sapiens]
Length = 275
Score = 99.4 bits (246), Expect = 6e-21
Identities = 49/134 (36%), Positives = 81/134 (60%), Gaps = 4/134 (2%)
Query: 85 IIVFSACRMP----PSHQLDHSKLLGYLKHTLDQYVESDYTLLYLHHGLTSDNKPSLSWL 140
+I+F++C +P P++ L Y+ TL+ V +Y L++L G + P LSW+
Sbjct: 133 VILFASCYLPRSSIPNYTYVMEHLFRYMVGTLELLVAENYLLVHLSGGTSRAQVPPLSWI 192
Query: 141 RDAYREFDRKYKKNIKALYIVHPTMFIKTLLILFKPLISFKFGQKIFYVNYLSELSEHVK 200
R YR DR+ +KN++AL +VH T ++K L L +P IS KF +KI +++ L EL++ +
Sbjct: 193 RQCYRTLDRRLRKNLRALVVVHATWYVKAFLALLRPFISSKFTRKIRFLDSLGELAQLIS 252
Query: 201 LEQLGIPRQVLKYD 214
L+Q+ IP V + D
Sbjct: 253 LDQVHIPEAVRQLD 266
>gi|109715844 BCL2/adenovirus E1B 19kD interacting protein like
isoform a [Homo sapiens]
Length = 357
Score = 99.4 bits (246), Expect = 6e-21
Identities = 49/134 (36%), Positives = 81/134 (60%), Gaps = 4/134 (2%)
Query: 85 IIVFSACRMP----PSHQLDHSKLLGYLKHTLDQYVESDYTLLYLHHGLTSDNKPSLSWL 140
+I+F++C +P P++ L Y+ TL+ V +Y L++L G + P LSW+
Sbjct: 215 VILFASCYLPRSSIPNYTYVMEHLFRYMVGTLELLVAENYLLVHLSGGTSRAQVPPLSWI 274
Query: 141 RDAYREFDRKYKKNIKALYIVHPTMFIKTLLILFKPLISFKFGQKIFYVNYLSELSEHVK 200
R YR DR+ +KN++AL +VH T ++K L L +P IS KF +KI +++ L EL++ +
Sbjct: 275 RQCYRTLDRRLRKNLRALVVVHATWYVKAFLALLRPFISSKFTRKIRFLDSLGELAQLIS 334
Query: 201 LEQLGIPRQVLKYD 214
L+Q+ IP V + D
Sbjct: 335 LDQVHIPEAVRQLD 348
>gi|20270373 T-cell activation Rho GTPase-activating protein isoform
c [Homo sapiens]
Length = 266
Score = 99.4 bits (246), Expect = 6e-21
Identities = 58/165 (35%), Positives = 98/165 (59%), Gaps = 3/165 (1%)
Query: 255 EQEPIPIVLRETVAYLQAHALTTEGIFRRSANTQVVREVQQKYNMGLPVDFDQYNELHLP 314
+ + +P +++ + L +TEGIFRR+AN + +E++++ N G VD ++ +HL
Sbjct: 96 DSDTLPRPIQDILTILCLKGPSTEGIFRRAANEKARKELKEELNSGDAVDLERL-PVHLL 154
Query: 315 AVILKTFLRELPEPLLTFDLYPHVVGFLNI-DESQRVPATLQVLQTLPEENYQVLRFLTA 373
AV+ K FLR +P LL+ DL+ +G L + DE R+ A QV LP N +L+ L
Sbjct: 155 AVVFKDFLRSIPRKLLSSDLFEEWMGALEMQDEEDRIEALKQVADKLPRPNLLLLKHLVY 214
Query: 374 FLVQISAHSDQNKMTNTNLAVVFGPNLLWAK-DAAITLKAINPIN 417
L IS +S+ N+M ++NLA+ GPN+L + D +++ +A +N
Sbjct: 215 VLHLISKNSEVNRMDSSNLAICIGPNMLTLENDQSLSFEAQKDLN 259
>gi|224458284 Rho GTPase activating protein 23 [Homo sapiens]
Length = 1397
Score = 97.8 bits (242), Expect = 2e-20
Identities = 62/209 (29%), Positives = 110/209 (52%), Gaps = 11/209 (5%)
Query: 211 LKYDDFLKSTQKSPATAPKP------MPPRPPLPNQQFGVSLQHLQEKNPEQEPIPIVLR 264
L+ D ++ A APK + + FGV L+ Q E + +P+++
Sbjct: 772 LRTQDLPAGSKDDSAAAPKTPWGINIIKKNKKAAPRAFGVRLEECQPAT-ENQRVPLIVA 830
Query: 265 ETVAYLQAHALTTEGIFRRSANTQVVREVQQKYNMG---LPVDFDQYNELHLPAVILKTF 321
++A L + GI+R N VV +Q++ N G + + +++ +L++ + +LK+F
Sbjct: 831 ACCRIVEARGLESTGIYRVPGNNAVVSSLQEQLNRGPGDINLQDERWQDLNVISSLLKSF 890
Query: 322 LRELPEPLLTFDLYPHVVGFLNIDESQRVPATLQ-VLQTLPEENYQVLRFLTAFLVQISA 380
R+LPEPL T D Y + I++++ TL+ +++ LP Y+ L+FL L I+
Sbjct: 891 FRKLPEPLFTDDKYNDFIEANRIEDARERMRTLRKLIRDLPGHYYETLKFLVGHLKTIAD 950
Query: 381 HSDQNKMTNTNLAVVFGPNLLWAKDAAIT 409
HS++NKM NLA+VFGP L+ + +T
Sbjct: 951 HSEKNKMEPRNLALVFGPTLVRTSEDNMT 979
>gi|111154090 Rho GTPase activating protein 24 isoform 3 [Homo
sapiens]
Length = 653
Score = 97.8 bits (242), Expect = 2e-20
Identities = 55/187 (29%), Positives = 97/187 (51%), Gaps = 5/187 (2%)
Query: 251 EKNPEQEPIPIVLRETVAYLQAHALTTEGIFRRSANTQVVREVQQKYNMGLPVDFDQYNE 310
EK P+++ + V +++ L EG+FR +V+E+Q ++ G FD +
Sbjct: 49 EKRYGNRLAPMLVEQCVDFIRQRGLKEEGLFRLPGQANLVKELQDAFDCGEKPSFDSNTD 108
Query: 311 LHLPAVILKTFLRELPEPLLTFDLYPHVVG---FLNIDESQRVPATLQVLQTLPEENYQV 367
+H A +LK +LRELPEP++ + Y + L+ +E V + +++LP NY +
Sbjct: 109 VHTVASLLKLYLRELPEPVIPYAKYEDFLSCAKLLSKEEEAGVKELAKQVKSLPVVNYNL 168
Query: 368 LRFLTAFLVQISAHSDQNKMTNTNLAVVFGPNLLWAK--DAAITLKAINPINTFTKFLLD 425
L+++ FL ++ ++S NKM+ NLA VFGPN+L K D ++ + ++
Sbjct: 169 LKYICRFLDEVQSYSGVNKMSVQNLATVFGPNILRPKVEDPLTIMEGTVVVQQLMSVMIS 228
Query: 426 HQGELFP 432
LFP
Sbjct: 229 KHDCLFP 235
>gi|111154099 Rho GTPase activating protein 24 isoform 2 [Homo
sapiens]
Length = 655
Score = 97.8 bits (242), Expect = 2e-20
Identities = 55/187 (29%), Positives = 97/187 (51%), Gaps = 5/187 (2%)
Query: 251 EKNPEQEPIPIVLRETVAYLQAHALTTEGIFRRSANTQVVREVQQKYNMGLPVDFDQYNE 310
EK P+++ + V +++ L EG+FR +V+E+Q ++ G FD +
Sbjct: 51 EKRYGNRLAPMLVEQCVDFIRQRGLKEEGLFRLPGQANLVKELQDAFDCGEKPSFDSNTD 110
Query: 311 LHLPAVILKTFLRELPEPLLTFDLYPHVVG---FLNIDESQRVPATLQVLQTLPEENYQV 367
+H A +LK +LRELPEP++ + Y + L+ +E V + +++LP NY +
Sbjct: 111 VHTVASLLKLYLRELPEPVIPYAKYEDFLSCAKLLSKEEEAGVKELAKQVKSLPVVNYNL 170
Query: 368 LRFLTAFLVQISAHSDQNKMTNTNLAVVFGPNLLWAK--DAAITLKAINPINTFTKFLLD 425
L+++ FL ++ ++S NKM+ NLA VFGPN+L K D ++ + ++
Sbjct: 171 LKYICRFLDEVQSYSGVNKMSVQNLATVFGPNILRPKVEDPLTIMEGTVVVQQLMSVMIS 230
Query: 426 HQGELFP 432
LFP
Sbjct: 231 KHDCLFP 237
>gi|111154092 Rho GTPase activating protein 24 isoform 1 [Homo
sapiens]
Length = 748
Score = 97.8 bits (242), Expect = 2e-20
Identities = 55/187 (29%), Positives = 97/187 (51%), Gaps = 5/187 (2%)
Query: 251 EKNPEQEPIPIVLRETVAYLQAHALTTEGIFRRSANTQVVREVQQKYNMGLPVDFDQYNE 310
EK P+++ + V +++ L EG+FR +V+E+Q ++ G FD +
Sbjct: 144 EKRYGNRLAPMLVEQCVDFIRQRGLKEEGLFRLPGQANLVKELQDAFDCGEKPSFDSNTD 203
Query: 311 LHLPAVILKTFLRELPEPLLTFDLYPHVVG---FLNIDESQRVPATLQVLQTLPEENYQV 367
+H A +LK +LRELPEP++ + Y + L+ +E V + +++LP NY +
Sbjct: 204 VHTVASLLKLYLRELPEPVIPYAKYEDFLSCAKLLSKEEEAGVKELAKQVKSLPVVNYNL 263
Query: 368 LRFLTAFLVQISAHSDQNKMTNTNLAVVFGPNLLWAK--DAAITLKAINPINTFTKFLLD 425
L+++ FL ++ ++S NKM+ NLA VFGPN+L K D ++ + ++
Sbjct: 264 LKYICRFLDEVQSYSGVNKMSVQNLATVFGPNILRPKVEDPLTIMEGTVVVQQLMSVMIS 323
Query: 426 HQGELFP 432
LFP
Sbjct: 324 KHDCLFP 330
>gi|7382480 Rho GTPase activating protein 6 isoform 4 [Homo sapiens]
Length = 771
Score = 97.8 bits (242), Expect = 2e-20
Identities = 52/160 (32%), Positives = 90/160 (56%), Gaps = 11/160 (6%)
Query: 253 NPEQEPIPIVLRETVAYLQAHALTTEGIFRRSANTQVVREVQQKYNMGLPVDFDQYNELH 312
NP +P ++ +L+ H L T GIFR ++ + VR+++++++ G+ V ++ + +H
Sbjct: 201 NPIYRQVPRLVDSCCQHLEKHGLQTVGIFRVGSSKKRVRQLREEFDRGIDVSLEEEHSVH 260
Query: 313 LPAVILKTFLRELPEPLLTFDLYPHVVGFLNIDESQRVPATLQVLQTLPEENYQVLRFLT 372
A +LK FLR++P+PLLT +LY + L ++ +++ ++ LP N L L
Sbjct: 261 DVAALLKEFLRDMPDPLLTRELYTAFINTLLLEPEEQLGTLQLLIYLLPPCNCDTLHRLL 320
Query: 373 AFLVQISAHSDQ-----------NKMTNTNLAVVFGPNLL 401
FL ++ H+D NKMT+ NLA +FGPNLL
Sbjct: 321 QFLSIVARHADDNISKDGQEVTGNKMTSLNLATIFGPNLL 360
>gi|95091988 Rho GTPase activating protein 6 isoform 3 [Homo
sapiens]
Length = 765
Score = 97.8 bits (242), Expect = 2e-20
Identities = 52/160 (32%), Positives = 90/160 (56%), Gaps = 11/160 (6%)
Query: 253 NPEQEPIPIVLRETVAYLQAHALTTEGIFRRSANTQVVREVQQKYNMGLPVDFDQYNELH 312
NP +P ++ +L+ H L T GIFR ++ + VR+++++++ G+ V ++ + +H
Sbjct: 404 NPIYRQVPRLVDSCCQHLEKHGLQTVGIFRVGSSKKRVRQLREEFDRGIDVSLEEEHSVH 463
Query: 313 LPAVILKTFLRELPEPLLTFDLYPHVVGFLNIDESQRVPATLQVLQTLPEENYQVLRFLT 372
A +LK FLR++P+PLLT +LY + L ++ +++ ++ LP N L L
Sbjct: 464 DVAALLKEFLRDMPDPLLTRELYTAFINTLLLEPEEQLGTLQLLIYLLPPCNCDTLHRLL 523
Query: 373 AFLVQISAHSDQ-----------NKMTNTNLAVVFGPNLL 401
FL ++ H+D NKMT+ NLA +FGPNLL
Sbjct: 524 QFLSIVARHADDNISKDGQEVTGNKMTSLNLATIFGPNLL 563
>gi|95091875 Rho GTPase activating protein 6 isoform 1 [Homo
sapiens]
Length = 974
Score = 97.8 bits (242), Expect = 2e-20
Identities = 52/160 (32%), Positives = 90/160 (56%), Gaps = 11/160 (6%)
Query: 253 NPEQEPIPIVLRETVAYLQAHALTTEGIFRRSANTQVVREVQQKYNMGLPVDFDQYNELH 312
NP +P ++ +L+ H L T GIFR ++ + VR+++++++ G+ V ++ + +H
Sbjct: 404 NPIYRQVPRLVDSCCQHLEKHGLQTVGIFRVGSSKKRVRQLREEFDRGIDVSLEEEHSVH 463
Query: 313 LPAVILKTFLRELPEPLLTFDLYPHVVGFLNIDESQRVPATLQVLQTLPEENYQVLRFLT 372
A +LK FLR++P+PLLT +LY + L ++ +++ ++ LP N L L
Sbjct: 464 DVAALLKEFLRDMPDPLLTRELYTAFINTLLLEPEEQLGTLQLLIYLLPPCNCDTLHRLL 523
Query: 373 AFLVQISAHSDQ-----------NKMTNTNLAVVFGPNLL 401
FL ++ H+D NKMT+ NLA +FGPNLL
Sbjct: 524 QFLSIVARHADDNISKDGQEVTGNKMTSLNLATIFGPNLL 563
>gi|54860079 nadrin isoform 1 [Homo sapiens]
Length = 881
Score = 96.3 bits (238), Expect = 5e-20
Identities = 54/165 (32%), Positives = 93/165 (56%), Gaps = 3/165 (1%)
Query: 242 FGVSLQHLQEKNPEQEPIPIVLRETVAYLQAHALTTEGIFRRSANTQVVREVQQKYNMGL 301
FG L+ +++ + +PI V L + EG+FR A +++++ +
Sbjct: 250 FGTPLEEHLKRSGREIALPI--EACVMLLLETGMKEEGLFRIGAGASKLKKLKAALDCST 307
Query: 302 PVDFDQYNELHLPAVILKTFLRELPEPLLTFDLYPHVVGFLNI-DESQRVPATLQVLQTL 360
+ Y++ H A LK++LRELPEPL+TF+LY ++ D+ +++ + Q L
Sbjct: 308 SHLDEFYSDPHAVAGALKSYLRELPEPLMTFNLYEEWTQVASVQDQDKKLQDLWRTCQKL 367
Query: 361 PEENYQVLRFLTAFLVQISAHSDQNKMTNTNLAVVFGPNLLWAKD 405
P +N+ R+L FL +++ SD NKMT +N+A+V GPNLLWA++
Sbjct: 368 PPQNFVNFRYLIKFLAKLAQTSDVNKMTPSNIAIVLGPNLLWARN 412
>gi|54860105 nadrin isoform 2 [Homo sapiens]
Length = 803
Score = 96.3 bits (238), Expect = 5e-20
Identities = 54/165 (32%), Positives = 93/165 (56%), Gaps = 3/165 (1%)
Query: 242 FGVSLQHLQEKNPEQEPIPIVLRETVAYLQAHALTTEGIFRRSANTQVVREVQQKYNMGL 301
FG L+ +++ + +PI V L + EG+FR A +++++ +
Sbjct: 250 FGTPLEEHLKRSGREIALPI--EACVMLLLETGMKEEGLFRIGAGASKLKKLKAALDCST 307
Query: 302 PVDFDQYNELHLPAVILKTFLRELPEPLLTFDLYPHVVGFLNI-DESQRVPATLQVLQTL 360
+ Y++ H A LK++LRELPEPL+TF+LY ++ D+ +++ + Q L
Sbjct: 308 SHLDEFYSDPHAVAGALKSYLRELPEPLMTFNLYEEWTQVASVQDQDKKLQDLWRTCQKL 367
Query: 361 PEENYQVLRFLTAFLVQISAHSDQNKMTNTNLAVVFGPNLLWAKD 405
P +N+ R+L FL +++ SD NKMT +N+A+V GPNLLWA++
Sbjct: 368 PPQNFVNFRYLIKFLAKLAQTSDVNKMTPSNIAIVLGPNLLWARN 412
>gi|150417981 glucocorticoid receptor DNA binding factor 1 [Homo
sapiens]
Length = 1499
Score = 95.1 bits (235), Expect = 1e-19
Identities = 56/187 (29%), Positives = 106/187 (56%), Gaps = 5/187 (2%)
Query: 217 LKSTQKSPATAPKPMPPRPPLPNQQFGVSLQHLQEKNPEQEPIPIVLRETVAYLQAHALT 276
L+ K P P+P + + FGV L + PE+ PIPI + + Y++A L+
Sbjct: 1222 LRRNTKKPKPKPRPSITKATWESNYFGVPLTTVV--TPEK-PIPIFIERCIEYIEATGLS 1278
Query: 277 TEGIFRRSANTQVVREVQQKYNMGLPVDFDQYN-ELHLPAVILKTFLRELPEPLLTFDLY 335
TEGI+R S N + +Q++++ +D + + ++ A +K+F ELP+PL+ +++
Sbjct: 1279 TEGIYRVSGNKSEMESLQRQFDQDHNLDLAEKDFTVNTVAGAMKSFFSELPDPLVPYNMQ 1338
Query: 336 PHVVGFLNI-DESQRVPATLQVLQTLPEENYQVLRFLTAFLVQISAHSDQNKMTNTNLAV 394
+V I D Q++ A +VL+ P+EN++V +++ + L ++S ++ N MT+ NL++
Sbjct: 1339 IDLVEAHKINDREQKLHALKEVLKKFPKENHEVFKYVISHLNKVSHNNKVNLMTSENLSI 1398
Query: 395 VFGPNLL 401
F P L+
Sbjct: 1399 CFWPTLM 1405
>gi|156142190 hypothetical protein LOC51306 isoform 2 [Homo sapiens]
Length = 887
Score = 95.1 bits (235), Expect = 1e-19
Identities = 61/204 (29%), Positives = 107/204 (52%), Gaps = 8/204 (3%)
Query: 237 LPNQQFGVSLQHLQEKNPEQEPIPIVLRETVAYLQAHA-LTTEGIFRRSANTQVVREVQQ 295
L N+ FG+ L LQ+ +P ++R V Y++ H L +G+F+ + N + V ++Q
Sbjct: 16 LANKIFGIPLDELQQGGHPDNEVPFIVRHVVDYIEEHGGLEQQGLFQVNGNAETVEWLRQ 75
Query: 296 KYNMGLPVDFDQYNELHLPAVILKTFLRELPEPLLTFDLYPHVV----GFLNIDESQRVP 351
+Y+ G VD + ++ +L+ FL+ELPEP++ L+ H++ + N DE R
Sbjct: 76 RYDSGEEVDLVKEADVPSAISLLRFFLQELPEPVIPGSLHIHLMQLSQDYNNEDEFGRKL 135
Query: 352 ATLQVLQTLPEENYQVLRFLTAFLVQISAHSDQNKMTNTNLAVVFGPNLLWAKDAAITLK 411
L LQ LP NY +L+FL FL +++H ++ N +LA VFGP++ +K
Sbjct: 136 RFL--LQQLPPVNYSLLKFLCRFLANVASHHEEIWSAN-SLAAVFGPDVFHIYTDVEDMK 192
Query: 412 AINPINTFTKFLLDHQGELFPSPD 435
++ LL++ E F + +
Sbjct: 193 EQEIVSRIMAGLLENYYEFFENEE 216
>gi|156142188 hypothetical protein LOC51306 isoform 1 [Homo sapiens]
Length = 915
Score = 95.1 bits (235), Expect = 1e-19
Identities = 61/204 (29%), Positives = 107/204 (52%), Gaps = 8/204 (3%)
Query: 237 LPNQQFGVSLQHLQEKNPEQEPIPIVLRETVAYLQAHA-LTTEGIFRRSANTQVVREVQQ 295
L N+ FG+ L LQ+ +P ++R V Y++ H L +G+F+ + N + V ++Q
Sbjct: 16 LANKIFGIPLDELQQGGHPDNEVPFIVRHVVDYIEEHGGLEQQGLFQVNGNAETVEWLRQ 75
Query: 296 KYNMGLPVDFDQYNELHLPAVILKTFLRELPEPLLTFDLYPHVV----GFLNIDESQRVP 351
+Y+ G VD + ++ +L+ FL+ELPEP++ L+ H++ + N DE R
Sbjct: 76 RYDSGEEVDLVKEADVPSAISLLRFFLQELPEPVIPGSLHIHLMQLSQDYNNEDEFGRKL 135
Query: 352 ATLQVLQTLPEENYQVLRFLTAFLVQISAHSDQNKMTNTNLAVVFGPNLLWAKDAAITLK 411
L LQ LP NY +L+FL FL +++H ++ N +LA VFGP++ +K
Sbjct: 136 RFL--LQQLPPVNYSLLKFLCRFLANVASHHEEIWSAN-SLAAVFGPDVFHIYTDVEDMK 192
Query: 412 AINPINTFTKFLLDHQGELFPSPD 435
++ LL++ E F + +
Sbjct: 193 EQEIVSRIMAGLLENYYEFFENEE 216
>gi|122939147 Rho GTPase activating protein 9 isoform 1 [Homo
sapiens]
Length = 731
Score = 95.1 bits (235), Expect = 1e-19
Identities = 60/185 (32%), Positives = 99/185 (53%), Gaps = 23/185 (12%)
Query: 237 LPNQQFGVSLQHLQEKNPEQEPIPIVLRETVAYLQAHALTTEGIFRRSANTQVVREV--- 293
L +Q FG L+ L ++ E + +P LR +A + L +GI+R S N VV+++
Sbjct: 516 LRDQVFGCQLESLCQR--EGDTVPSFLRLCIAAVDKRGLDVDGIYRVSGNLAVVQKLRFL 573
Query: 294 -----------------QQKYNMGLPVDFDQYNELHLPAVILKTFLRELPEPLLTFDLYP 336
Q L +D +++++H+ LK FLRELP+PL+ L P
Sbjct: 574 VDRERAVTSDGRYVFPEQPGQEGRLDLDSTEWDDIHVVTGALKLFLRELPQPLVPPLLLP 633
Query: 337 HVVGFLNIDESQRVPATLQ-VLQTLPEENYQVLRFLTAFLVQISAHSDQNKMTNTNLAVV 395
H L + ES++ + +Q ++ ++P+ N+ LR+L L ++ AHSD+N+MT NL +V
Sbjct: 634 HFRAALALSESEQCLSQIQELIGSMPKPNHDTLRYLLEHLCRVIAHSDKNRMTPHNLGIV 693
Query: 396 FGPNL 400
FGP L
Sbjct: 694 FGPTL 698
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.136 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,923,599
Number of Sequences: 37866
Number of extensions: 874145
Number of successful extensions: 5345
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 132
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 4885
Number of HSP's gapped (non-prelim): 305
length of query: 439
length of database: 18,247,518
effective HSP length: 105
effective length of query: 334
effective length of database: 14,271,588
effective search space: 4766710392
effective search space used: 4766710392
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.