| Name: HCP5 | Sequence: fasta or formatted (132aa) | NCBI GI: 47087197 | |
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Description: HLA complex P5
| Not currently referenced in the text | ||
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 3.8 5 2 C cysteine 2.3 3 1 D aspartate 2.3 3 1 E glutamate 3.8 5 1 F phenylalanine 1.5 2 1 G glycine 12.9 17 2 H histidine 4.5 6 1 I isoleucine 2.3 3 1 K lysine 2.3 3 1 L leucine 15.9 21 3 M methionine 4.5 6 1 N asparagine 3.0 4 1 P proline 6.8 9 1 Q glutamine 1.5 2 1 R arginine 4.5 6 1 S serine 15.9 21 3 T threonine 4.5 6 1 V valine 3.0 4 1 W tryptophan 3.8 5 1 Y tyrosine 0.8 1 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 HLA complex P5 PLAC4 0.028 placenta-specific 4 IGFN1 0.024 immunoglobulin-like and fibronectin type III domain... LOC100294448 0.020 PREDICTED: hypothetical protein IGSF22 0.016 immunoglobulin superfamily, member 22 LOC100286913 0.016 PREDICTED: hypothetical protein XP_002343802 OLFM4 0.016 olfactomedin 4 precursor LOC645634 0.012 PREDICTED: hypothetical protein LOC645634 0.012 PREDICTED: hypothetical protein LOC645634 0.012 PREDICTED: hypothetical protein POU5F1B 0.012 POU class 5 homeobox 1B NCOR2 0.008 nuclear receptor co-repressor 2 isoform 2 NCOR2 0.008 nuclear receptor co-repressor 2 isoform 1 C2orf18 0.008 ANT2-binding protein CSMD2 0.008 CUB and Sushi multiple domains 2 LIMD1 0.008 LIM domains containing 1 KALRN 0.008 kalirin, RhoGEF kinase isoform 1 KALRN 0.008 kalirin, RhoGEF kinase isoform 3 CDC20 0.008 cell division cycle 20 VWA5B2 0.008 von Willebrand factor A domain containing 5B2 [Homo... MUC20 0.008 mucin 20 isoform S MUC20 0.008 mucin 20 isoform L ADAD2 0.008 adenosine deaminase domain containing 2 isoform 2 [... ADAD2 0.008 adenosine deaminase domain containing 2 isoform 1 [... TEP1 0.004 telomerase-associated protein 1 PCSK2 0.004 proprotein convertase subtilisin/kexin type 2 CSMD1 0.004 CUB and Sushi multiple domains 1 AASS 0.004 aminoadipate-semialdehyde synthase TACC2 0.004 transforming, acidic coiled-coil containing protein... OR2Y1 0.004 olfactory receptor, family 2, subfamily Y, member 1 ...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
