Guide to the Human Genome
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Name: CAMK1 Sequence: fasta or formatted (370aa) NCBI GI: 4502553
Description:

calcium/calmodulin-dependent protein kinase I

Referenced in:

Calmodulin and Calcium

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         30           2
 C cysteine            2.7         10           3
 D aspartate           7.6         28           2
 E glutamate           7.8         29           1
 F phenylalanine       3.5         13           1
 G glycine             7.3         27           2
 H histidine           3.0         11           1
 I isoleucine          6.5         24           1
 K lysine              7.3         27           2
 L leucine             9.7         36           2
 M methionine          1.9          7           1
 N asparagine          1.9          7           1
 P proline             4.6         17           2
 Q glutamine           4.3         16           1
 R arginine            3.5         13           1
 S serine              5.9         22           1
 T threonine           3.5         13           1
 V valine              5.7         21           2
 W tryptophan          1.4          5           1
 Y tyrosine            3.8         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   calcium/calmodulin-dependent protein kinase I 
CAMK1D                0.712   calcium/calmodulin-dependent protein kinase ID isofor...
CAMK1D                0.712   calcium/calmodulin-dependent protein kinase ID isofo...
PNCK                  0.591   pregnancy upregulated non-ubiquitously expressed Ca...
PNCK                  0.591   pregnancy upregulated non-ubiquitously expressed Ca...
CAMK1G                0.574   calcium/calmodulin-dependent protein kinase IG [Homo...
CAMKV                 0.383   CaM kinase-like vesicle-associated 
PSKH1                 0.348   protein serine kinase H1 
CAMK4                 0.342   calcium/calmodulin-dependent protein kinase IV 
DCLK2                 0.321   doublecortin-like kinase 2 isoform b 
DCLK2                 0.321   doublecortin-like kinase 2 isoform a 
DCLK1                 0.315   doublecortin-like kinase 1 
PSKH2                 0.308   protein serine kinase H2 
DCLK3                 0.285   doublecortin-like kinase 3 
CAMK2G                0.284   calcium/calmodulin-dependent protein kinase II gamma...
CAMK2G                0.284   calcium/calmodulin-dependent protein kinase II gamma...
CAMK2G                0.284   calcium/calmodulin-dependent protein kinase II gamma...
CAMK2G                0.284   calcium/calmodulin-dependent protein kinase II gamma...
CAMK2G                0.284   calcium/calmodulin-dependent protein kinase II gamma...
CAMK2A                0.282   calcium/calmodulin-dependent protein kinase II alpha...
CAMK2A                0.282   calcium/calmodulin-dependent protein kinase II alpha...
CAMK2D                0.277   calcium/calmodulin-dependent protein kinase II delt...
CAMK2D                0.277   calcium/calmodulin-dependent protein kinase II delta...
CAMK2D                0.277   calcium/calmodulin-dependent protein kinase II delt...
CAMK2D                0.277   calcium/calmodulin-dependent protein kinase II delta...
CAMK2D                0.277   calcium/calmodulin-dependent protein kinase II delta...
CAMK2D                0.277   calcium/calmodulin-dependent protein kinase II delta...
CAMK2B                0.273   calcium/calmodulin-dependent protein kinase II beta ...
CAMK2B                0.273   calcium/calmodulin-dependent protein kinase II beta ...
CAMK2B                0.273   calcium/calmodulin-dependent protein kinase II beta ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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