Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: CAMK1D Sequence: fasta or formatted (357aa) NCBI GI: 9966875
Description:

calcium/calmodulin-dependent protein kinase ID isoform 1

Referenced in:

Calmodulin and Calcium

Other entries for this name:
alt prot [385aa] calcium/calmodulin-dependent protein kinase ID isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7         31           2
 C cysteine            1.7          6           1
 D aspartate           5.9         21           2
 E glutamate           8.4         30           2
 F phenylalanine       3.6         13           1
 G glycine             5.0         18           2
 H histidine           2.2          8           1
 I isoleucine          6.2         22           1
 K lysine              9.5         34           2
 L leucine             8.4         30           2
 M methionine          2.2          8           1
 N asparagine          3.6         13           1
 P proline             3.4         12           2
 Q glutamine           2.8         10           1
 R arginine            3.6         13           1
 S serine             10.1         36           4
 T threonine           2.8         10           1
 V valine              5.9         21           2
 W tryptophan          1.4          5           1
 Y tyrosine            4.5         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   calcium/calmodulin-dependent protein kinase ID isofor... 
CAMK1D                0.974   calcium/calmodulin-dependent protein kinase ID isofo...
CAMK1                 0.758   calcium/calmodulin-dependent protein kinase I 
CAMK1G                0.665   calcium/calmodulin-dependent protein kinase IG [Homo...
PNCK                  0.627   pregnancy upregulated non-ubiquitously expressed Ca...
PNCK                  0.627   pregnancy upregulated non-ubiquitously expressed Ca...
CAMKV                 0.393   CaM kinase-like vesicle-associated 
PSKH1                 0.377   protein serine kinase H1 
CAMK4                 0.361   calcium/calmodulin-dependent protein kinase IV 
PSKH2                 0.332   protein serine kinase H2 
DCLK1                 0.329   doublecortin-like kinase 1 
DCLK2                 0.322   doublecortin-like kinase 2 isoform b 
DCLK2                 0.322   doublecortin-like kinase 2 isoform a 
CAMK2A                0.316   calcium/calmodulin-dependent protein kinase II alpha...
CAMK2A                0.316   calcium/calmodulin-dependent protein kinase II alpha...
CAMK2G                0.312   calcium/calmodulin-dependent protein kinase II gamma...
CAMK2B                0.309   calcium/calmodulin-dependent protein kinase II beta ...
CAMK2B                0.308   calcium/calmodulin-dependent protein kinase II beta ...
CAMK2B                0.308   calcium/calmodulin-dependent protein kinase II beta ...
CAMK2B                0.308   calcium/calmodulin-dependent protein kinase II beta ...
CAMK2B                0.308   calcium/calmodulin-dependent protein kinase II beta ...
CAMK2B                0.308   calcium/calmodulin-dependent protein kinase II beta ...
CAMK2B                0.308   calcium/calmodulin-dependent protein kinase II beta ...
CAMK2B                0.308   calcium/calmodulin-dependent protein kinase II beta ...
DCLK3                 0.306   doublecortin-like kinase 3 
CAMK2G                0.306   calcium/calmodulin-dependent protein kinase II gamma...
CAMK2D                0.306   calcium/calmodulin-dependent protein kinase II delt...
CAMK2D                0.306   calcium/calmodulin-dependent protein kinase II delta...
CAMK2D                0.306   calcium/calmodulin-dependent protein kinase II delt...
CAMK2D                0.306   calcium/calmodulin-dependent protein kinase II delta...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press