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Search of human proteins with 46370089
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|46370089 sorting nexin 15 isoform B [Homo sapiens]
(256 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|46370089 sorting nexin 15 isoform B [Homo sapiens] 521 e-148
gi|22547191 sorting nexin 15 isoform A [Homo sapiens] 453 e-128
gi|19923723 ribosomal protein S6 kinase, 52kDa, polypeptide 1 is... 163 2e-40
gi|209915591 ribosomal protein S6 kinase, 52kDa, polypeptide 1 i... 139 2e-33
gi|15553099 sorting nexin 21 isoform a [Homo sapiens] 49 6e-06
gi|33504571 sorting nexin 20 isoform 1 [Homo sapiens] 47 2e-05
gi|23111038 sorting nexin 2 [Homo sapiens] 42 5e-04
gi|24797153 faciogenital dysplasia protein [Homo sapiens] 42 5e-04
gi|31563383 serum/glucocorticoid regulated kinase 3 isoform 2 [H... 42 7e-04
gi|31563382 serum/glucocorticoid regulated kinase 3 isoform 1 [H... 42 7e-04
gi|75813626 serum/glucocorticoid regulated kinase 3 isoform 1 [H... 42 7e-04
gi|154091028 sorting nexin 29 [Homo sapiens] 41 0.001
gi|68800430 HCLS1 binding protein 3 [Homo sapiens] 38 0.010
gi|28144916 lin-37 homolog [Homo sapiens] 38 0.010
gi|224177511 sorting nexin 18 isoform c [Homo sapiens] 37 0.017
gi|157057545 sorting nexin 18 isoform a [Homo sapiens] 37 0.017
gi|157057543 sorting nexin 18 isoform b [Homo sapiens] 37 0.017
gi|26051204 calcium/calmodulin-dependent protein kinase II beta ... 37 0.017
gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Hom... 36 0.029
gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Hom... 36 0.029
gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo sap... 36 0.029
gi|23111036 sorting nexin 1 isoform c [Homo sapiens] 36 0.029
gi|23111034 sorting nexin 1 isoform a [Homo sapiens] 36 0.029
gi|24308352 DMRT-like family B with proline-rich C-terminal, 1 [... 36 0.029
gi|15812226 transcriptional regulating factor 1 [Homo sapiens] 35 0.049
gi|157502171 sorting nexin 19 [Homo sapiens] 35 0.064
gi|13899309 ribosomal protein S6 kinase-like 1 [Homo sapiens] 35 0.064
gi|12597625 activating transcription factor 5 [Homo sapiens] 35 0.083
gi|23111055 sorting nexin 7 isoform b [Homo sapiens] 35 0.083
gi|194294540 sorting nexin 7 isoform a [Homo sapiens] 35 0.083
>gi|46370089 sorting nexin 15 isoform B [Homo sapiens]
Length = 256
Score = 521 bits (1341), Expect = e-148
Identities = 256/256 (100%), Positives = 256/256 (100%)
Query: 1 MSRQAKDDFLRHYTVSDPRTHPKGYTEYKVTAQFISKKDPEDVKEVVVWKRYSDFRKLHG 60
MSRQAKDDFLRHYTVSDPRTHPKGYTEYKVTAQFISKKDPEDVKEVVVWKRYSDFRKLHG
Sbjct: 1 MSRQAKDDFLRHYTVSDPRTHPKGYTEYKVTAQFISKKDPEDVKEVVVWKRYSDFRKLHG 60
Query: 61 DLAYTHRNLFRRLEEFPAFPRAQVFGRFEASVIEERRKGAEDLLRFTVHIPALNNSPQLK 120
DLAYTHRNLFRRLEEFPAFPRAQVFGRFEASVIEERRKGAEDLLRFTVHIPALNNSPQLK
Sbjct: 61 DLAYTHRNLFRRLEEFPAFPRAQVFGRFEASVIEERRKGAEDLLRFTVHIPALNNSPQLK 120
Query: 121 EFFRGGEVTRPLEVSRDLHILPPPLIPTPPPDDPRLSQLLPAERRGLEELEVPVDPPPSS 180
EFFRGGEVTRPLEVSRDLHILPPPLIPTPPPDDPRLSQLLPAERRGLEELEVPVDPPPSS
Sbjct: 121 EFFRGGEVTRPLEVSRDLHILPPPLIPTPPPDDPRLSQLLPAERRGLEELEVPVDPPPSS 180
Query: 181 PAQEALDLLFNCESTEEASGSPARGPLTEAELALFDPFSKEGDPLPARQEGVKKKAAEYL 240
PAQEALDLLFNCESTEEASGSPARGPLTEAELALFDPFSKEGDPLPARQEGVKKKAAEYL
Sbjct: 181 PAQEALDLLFNCESTEEASGSPARGPLTEAELALFDPFSKEGDPLPARQEGVKKKAAEYL 240
Query: 241 KRAEEILRLHLSQLPP 256
KRAEEILRLHLSQLPP
Sbjct: 241 KRAEEILRLHLSQLPP 256
>gi|22547191 sorting nexin 15 isoform A [Homo sapiens]
Length = 342
Score = 453 bits (1166), Expect = e-128
Identities = 222/227 (97%), Positives = 223/227 (98%)
Query: 1 MSRQAKDDFLRHYTVSDPRTHPKGYTEYKVTAQFISKKDPEDVKEVVVWKRYSDFRKLHG 60
MSRQAKDDFLRHYTVSDPRTHPKGYTEYKVTAQFISKKDPEDVKEVVVWKRYSDFRKLHG
Sbjct: 1 MSRQAKDDFLRHYTVSDPRTHPKGYTEYKVTAQFISKKDPEDVKEVVVWKRYSDFRKLHG 60
Query: 61 DLAYTHRNLFRRLEEFPAFPRAQVFGRFEASVIEERRKGAEDLLRFTVHIPALNNSPQLK 120
DLAYTHRNLFRRLEEFPAFPRAQVFGRFEASVIEERRKGAEDLLRFTVHIPALNNSPQLK
Sbjct: 61 DLAYTHRNLFRRLEEFPAFPRAQVFGRFEASVIEERRKGAEDLLRFTVHIPALNNSPQLK 120
Query: 121 EFFRGGEVTRPLEVSRDLHILPPPLIPTPPPDDPRLSQLLPAERRGLEELEVPVDPPPSS 180
EFFRGGEVTRPLEVSRDLHILPPPLIPTPPPDDPRLSQLLPAERRGLEELEVPVDPPPSS
Sbjct: 121 EFFRGGEVTRPLEVSRDLHILPPPLIPTPPPDDPRLSQLLPAERRGLEELEVPVDPPPSS 180
Query: 181 PAQEALDLLFNCESTEEASGSPARGPLTEAELALFDPFSKEGDPLPA 227
PAQEALDLLFNCESTEEASGSPARGPLTEAELALFDPFSKE P+
Sbjct: 181 PAQEALDLLFNCESTEEASGSPARGPLTEAELALFDPFSKEEGAAPS 227
>gi|19923723 ribosomal protein S6 kinase, 52kDa, polypeptide 1
isoform a [Homo sapiens]
Length = 1066
Score = 163 bits (412), Expect = 2e-40
Identities = 102/257 (39%), Positives = 144/257 (56%), Gaps = 14/257 (5%)
Query: 3 RQAKDDFLRHYTVSDPRTHPKGYTEYKVTAQFISKKDPEDVKEVVVWKRYSDFRKLHGDL 62
R+ D R YTV++P+ HP+GYT YKVTA+ +S+++PEDV+E++VWKRYSDF+KLH +L
Sbjct: 5 RERSADLARFYTVTEPQRHPRGYTVYKVTARVVSRRNPEDVQEIIVWKRYSDFKKLHKEL 64
Query: 63 AYTHRNLFRRLEEFPAFPRAQVFGRFEASVIEERRKGAEDLLRFTVHIPALNNSPQLKEF 122
H+NLFR E FP F + VFGRF+ +VIEERR+ AEDLL+F+ +IPAL NS QL++F
Sbjct: 65 WQIHKNLFRHSELFPPFAKGIVFGRFDETVIEERRQCAEDLLQFSANIPALYNSKQLEDF 124
Query: 123 FRGG------EVTRPLEVSRDLHILPPPLIPTPPPDDPRLSQLLPAERRGLEELEVPVDP 176
F+GG E+ P E D I P T L + L EL+ +
Sbjct: 125 FKGGIINDSSELIGPAEAHSDSLIDTFPECSTEGFSSDSDLVSLTVDVDSLAELDDGMAS 184
Query: 177 PPSSPAQEALDLLFNCESTEEASGSPARGPLTEAELALFDPFSKEGDPLPARQEGVKKKA 236
+SP + L + S A S + TE E +E L K
Sbjct: 185 NQNSPIRTFGLNLSSDSSALGAVASDSEQSKTEEE--------RESRSLFPGSLKPKLGK 236
Query: 237 AEYLKRAEEILRLHLSQ 253
+YL++A E+++L L +
Sbjct: 237 RDYLEKAGELIKLALKK 253
Score = 34.7 bits (78), Expect = 0.083
Identities = 15/30 (50%), Positives = 21/30 (70%)
Query: 221 EGDPLPARQEGVKKKAAEYLKRAEEILRLH 250
+G+ P R+E VK++ AEYL RAE I L+
Sbjct: 278 QGESSPTRREAVKRRTAEYLMRAESISSLY 307
>gi|209915591 ribosomal protein S6 kinase, 52kDa, polypeptide 1
isoform b [Homo sapiens]
Length = 1054
Score = 139 bits (350), Expect = 2e-33
Identities = 96/257 (37%), Positives = 133/257 (51%), Gaps = 26/257 (10%)
Query: 3 RQAKDDFLRHYTVSDPRTHPKGYTEYKVTAQFISKKDPEDVKEVVVWKRYSDFRKLHGDL 62
R+ D R YTV++P+ HP+GYT YKVTA+ ++VWKRYSDF+KLH +L
Sbjct: 5 RERSADLARFYTVTEPQRHPRGYTVYKVTAR------------IIVWKRYSDFKKLHKEL 52
Query: 63 AYTHRNLFRRLEEFPAFPRAQVFGRFEASVIEERRKGAEDLLRFTVHIPALNNSPQLKEF 122
H+NLFR E FP F + VFGRF+ +VIEERR+ AEDLL+F+ +IPAL NS QL++F
Sbjct: 53 WQIHKNLFRHSELFPPFAKGIVFGRFDETVIEERRQCAEDLLQFSANIPALYNSKQLEDF 112
Query: 123 FRGG------EVTRPLEVSRDLHILPPPLIPTPPPDDPRLSQLLPAERRGLEELEVPVDP 176
F+GG E+ P E D I P T L + L EL+ +
Sbjct: 113 FKGGIINDSSELIGPAEAHSDSLIDTFPECSTEGFSSDSDLVSLTVDVDSLAELDDGMAS 172
Query: 177 PPSSPAQEALDLLFNCESTEEASGSPARGPLTEAELALFDPFSKEGDPLPARQEGVKKKA 236
+SP + L + S A S + TE E +E L K
Sbjct: 173 NQNSPIRTFGLNLSSDSSALGAVASDSEQSKTEEE--------RESRSLFPGSLKPKLGK 224
Query: 237 AEYLKRAEEILRLHLSQ 253
+YL++A E+++L L +
Sbjct: 225 RDYLEKAGELIKLALKK 241
Score = 34.7 bits (78), Expect = 0.083
Identities = 15/30 (50%), Positives = 21/30 (70%)
Query: 221 EGDPLPARQEGVKKKAAEYLKRAEEILRLH 250
+G+ P R+E VK++ AEYL RAE I L+
Sbjct: 266 QGESSPTRREAVKRRTAEYLMRAESISSLY 295
>gi|15553099 sorting nexin 21 isoform a [Homo sapiens]
Length = 373
Score = 48.5 bits (114), Expect = 6e-06
Identities = 34/116 (29%), Positives = 52/116 (44%), Gaps = 10/116 (8%)
Query: 15 VSDPRTHPKGYTEYKVTAQFISKKDPEDVKEVVVWKRYSDFRKLHGDLAYTHRNLFRRLE 74
V DP P Y Y + + P D + + +RYSDF +LH +L R +
Sbjct: 141 VKDP---PSKYVLYTLA---VIGPGPPDCQPAQISRRYSDFERLHRNLQRQFRGPMAAI- 193
Query: 75 EFPAFPRAQVFGRFEASVIEERRKGAEDLLRFTVHIPALNNSPQLKEFFRGGEVTR 130
+FPR ++ F A I R + E L +P L ++P L++FF E+ R
Sbjct: 194 ---SFPRKRLRRNFTAETIARRSRAFEQFLGHLQAVPELRHAPDLQDFFVLPELRR 246
>gi|33504571 sorting nexin 20 isoform 1 [Homo sapiens]
Length = 316
Score = 46.6 bits (109), Expect = 2e-05
Identities = 39/142 (27%), Positives = 63/142 (44%), Gaps = 18/142 (12%)
Query: 13 YTVSDPRTHPKGYTEYKVTAQFISKKDPEDVKEVVVWKRYSDFRKLHGDLAYTHRNLFRR 72
+ ++ R + +++ V + + D + V+ +RYSDF KL L T R
Sbjct: 78 FEIASARIEERKVSKFVVYQIIVIQTGSFDNNKAVLERRYSDFAKLQKALLKTFREEIED 137
Query: 73 LEEFPAFPRAQVFGRFEASVIEERRKGAEDLLRFTVHIPALNNS---------PQLKEFF 123
+E FPR + G F +I ERR+ ++ L I + S P+L+E F
Sbjct: 138 VE----FPRKHLTGNFAEEMICERRRALQEYLGLLYAIRCVRRSREFLDFLTRPELREAF 193
Query: 124 ---RGGEVTRPLEVSRDLHILP 142
R G+ R LE+ L +LP
Sbjct: 194 GCLRAGQYPRALELL--LRVLP 213
>gi|23111038 sorting nexin 2 [Homo sapiens]
Length = 519
Score = 42.0 bits (97), Expect = 5e-04
Identities = 39/131 (29%), Positives = 52/131 (39%), Gaps = 22/131 (16%)
Query: 15 VSDPRTHPKG---YTEYKVTAQFISKKDPEDVKEVVVWKRYSDFRKLHGDLA--YTHRNL 69
VSDP G Y Y+VT + + E V +R+SDF LH LA Y H
Sbjct: 146 VSDPEKVGDGMNAYMAYRVTTK--TSLSMFSKSEFSVKRRFSDFLGLHSKLASKYLHVGY 203
Query: 70 FRRLEEFPAFPRAQVFGRFEASV----------IEERRKGAEDLLRFTVHIPALNNSPQL 119
P P + G + V +E+RR E L+ TV P L P L
Sbjct: 204 I-----VPPAPEKSIVGMTKVKVGKEDSSSTEFVEKRRAALERYLQRTVKHPTLLQDPDL 258
Query: 120 KEFFRGGEVTR 130
++F E+ R
Sbjct: 259 RQFLESSELPR 269
>gi|24797153 faciogenital dysplasia protein [Homo sapiens]
Length = 961
Score = 42.0 bits (97), Expect = 5e-04
Identities = 31/91 (34%), Positives = 39/91 (42%), Gaps = 4/91 (4%)
Query: 141 LPPPLIPTPPPDDPRLSQLLPAERRGLEELEVPVDPPPSSPAQEALDLLFNCESTEEASG 200
+PPPL P PPP S+ LPA+ R + L + PSS A +L F E AS
Sbjct: 173 MPPPLEPIPPPP----SRPLPADPRVAKGLAPRAEASPSSAAVSSLIEKFEREPVIVASD 228
Query: 201 SPARGPLTEAELALFDPFSKEGDPLPARQEG 231
P GP + P P+P EG
Sbjct: 229 RPVPGPSPGPPEPVMLPQPTSQPPVPQLPEG 259
>gi|31563383 serum/glucocorticoid regulated kinase 3 isoform 2 [Homo
sapiens]
Length = 464
Score = 41.6 bits (96), Expect = 7e-04
Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 22/111 (19%)
Query: 19 RTHPKGYTEYKVTAQFISKKDPEDVKEVVVWKRYSDFRKLHGDLAYTHRNLFRRLEEFPA 78
R K +T YKV E V++RY++F KL+ L ++FPA
Sbjct: 25 REKKKRFTVYKVLVSV-------GRSEWFVFRRYAEFDKLYNTLK----------KQFPA 67
Query: 79 F----PRAQVFG-RFEASVIEERRKGAEDLLRFTVHIPALNNSPQLKEFFR 124
P ++FG F+ I++RR G + ++ V P L N P ++ F +
Sbjct: 68 MALKIPAKRIFGDNFDPDFIKQRRAGLNEFIQNLVRYPELYNHPDVRAFLQ 118
>gi|31563382 serum/glucocorticoid regulated kinase 3 isoform 1 [Homo
sapiens]
Length = 496
Score = 41.6 bits (96), Expect = 7e-04
Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 22/111 (19%)
Query: 19 RTHPKGYTEYKVTAQFISKKDPEDVKEVVVWKRYSDFRKLHGDLAYTHRNLFRRLEEFPA 78
R K +T YKV E V++RY++F KL+ L ++FPA
Sbjct: 25 REKKKRFTVYKVLVSV-------GRSEWFVFRRYAEFDKLYNTLK----------KQFPA 67
Query: 79 F----PRAQVFG-RFEASVIEERRKGAEDLLRFTVHIPALNNSPQLKEFFR 124
P ++FG F+ I++RR G + ++ V P L N P ++ F +
Sbjct: 68 MALKIPAKRIFGDNFDPDFIKQRRAGLNEFIQNLVRYPELYNHPDVRAFLQ 118
>gi|75813626 serum/glucocorticoid regulated kinase 3 isoform 1 [Homo
sapiens]
Length = 496
Score = 41.6 bits (96), Expect = 7e-04
Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 22/111 (19%)
Query: 19 RTHPKGYTEYKVTAQFISKKDPEDVKEVVVWKRYSDFRKLHGDLAYTHRNLFRRLEEFPA 78
R K +T YKV E V++RY++F KL+ L ++FPA
Sbjct: 25 REKKKRFTVYKVLVSV-------GRSEWFVFRRYAEFDKLYNTLK----------KQFPA 67
Query: 79 F----PRAQVFG-RFEASVIEERRKGAEDLLRFTVHIPALNNSPQLKEFFR 124
P ++FG F+ I++RR G + ++ V P L N P ++ F +
Sbjct: 68 MALKIPAKRIFGDNFDPDFIKQRRAGLNEFIQNLVRYPELYNHPDVRAFLQ 118
>gi|154091028 sorting nexin 29 [Homo sapiens]
Length = 428
Score = 40.8 bits (94), Expect = 0.001
Identities = 38/132 (28%), Positives = 61/132 (46%), Gaps = 26/132 (19%)
Query: 48 VWKRYSDFRKLHGDLAYTHRNLFRRLEEFPAFPRAQVFGRFEASVIEERRKGAEDLLRFT 107
+++RY++FR LH L +N + ++ + FP + G +A +EERRK ++ LR
Sbjct: 306 IYRRYTEFRSLHHKL----QNKYPQVRAYN-FPPKKAIGNKDAKFVEERRKQLQNYLRSV 360
Query: 108 VH-----IPALNNSP------QLKEFFRGGEVTRPLEVSRDLHILPPPLIPTPPPDDPRL 156
++ +P SP QL FF ++T P E P P P+L
Sbjct: 361 MNKVIQMVPEFAASPKKETLIQLMPFF--VDITPPGE--------PVNSRPKAASRFPKL 410
Query: 157 SQLLPAERRGLE 168
S+ P E R +E
Sbjct: 411 SRGQPRETRNVE 422
>gi|68800430 HCLS1 binding protein 3 [Homo sapiens]
Length = 392
Score = 37.7 bits (86), Expect = 0.010
Identities = 33/105 (31%), Positives = 48/105 (45%), Gaps = 13/105 (12%)
Query: 24 GYTEYKVT-----AQFISKKD-PEDVKEVVVWKRYSDFRKLHGDLAYTHRNLFRRLEEFP 77
G+ EY++ A F S K PEDV + +V K+YS+ + + L+ + P
Sbjct: 37 GHVEYQILVVTRLAAFKSAKHRPEDVVQFLVSKKYSEIEEFYQKLSSRY-----AAASLP 91
Query: 78 AFPRAQVFGRFEASVIEERRKGAEDLLRFTVHIPALNNSPQLKEF 122
PR +F S I ERR ++LR L SP+L EF
Sbjct: 92 PLPRKVLF--VGESDIRERRAVFNEILRCVSKDAELAGSPELLEF 134
>gi|28144916 lin-37 homolog [Homo sapiens]
Length = 246
Score = 37.7 bits (86), Expect = 0.010
Identities = 35/108 (32%), Positives = 45/108 (41%), Gaps = 18/108 (16%)
Query: 74 EEFPAFPRAQVFGRFEASVIEERRKGAEDLLRFTVHIPALNNSPQLKEFFRGGEVTRPLE 133
E P +P + + R SV E + L P L E G EVT
Sbjct: 111 ENTPLYPICRAWMRNSPSVRERECSPSSPL-------------PPLPEDEEGSEVTN--S 155
Query: 134 VSRDLHILPPPLIPTPPPD--DPRLSQLLPAERRGLEELEVPVDPPPS 179
SRD++ LPPP P PP D R+ L E +G + E P +P PS
Sbjct: 156 KSRDVYKLPPPTPPGPPGDACRSRIPSPLQPEMQGTPDDE-PSEPEPS 202
>gi|224177511 sorting nexin 18 isoform c [Homo sapiens]
Length = 591
Score = 37.0 bits (84), Expect = 0.017
Identities = 30/91 (32%), Positives = 39/91 (42%), Gaps = 19/91 (20%)
Query: 14 TVSDPRTHPKGYTEYKVTAQFISKKDPEDVKEVVVWKRYSDFRKLHGDLAYTHRNLFRRL 73
T+ DP T++K +IS K +V V +RY F L+ LA
Sbjct: 279 TIDDPTKQ----TKFKGMKSYISYKLVPTHTQVPVHRRYKHFDWLYARLA---------- 324
Query: 74 EEFPAF-----PRAQVFGRFEASVIEERRKG 99
E+FP P Q GRFE I +RRKG
Sbjct: 325 EKFPVISVPHLPEKQATGRFEEDFISKRRKG 355
>gi|157057545 sorting nexin 18 isoform a [Homo sapiens]
Length = 624
Score = 37.0 bits (84), Expect = 0.017
Identities = 30/91 (32%), Positives = 39/91 (42%), Gaps = 19/91 (20%)
Query: 14 TVSDPRTHPKGYTEYKVTAQFISKKDPEDVKEVVVWKRYSDFRKLHGDLAYTHRNLFRRL 73
T+ DP T++K +IS K +V V +RY F L+ LA
Sbjct: 279 TIDDPTKQ----TKFKGMKSYISYKLVPTHTQVPVHRRYKHFDWLYARLA---------- 324
Query: 74 EEFPAF-----PRAQVFGRFEASVIEERRKG 99
E+FP P Q GRFE I +RRKG
Sbjct: 325 EKFPVISVPHLPEKQATGRFEEDFISKRRKG 355
>gi|157057543 sorting nexin 18 isoform b [Homo sapiens]
Length = 628
Score = 37.0 bits (84), Expect = 0.017
Identities = 30/91 (32%), Positives = 39/91 (42%), Gaps = 19/91 (20%)
Query: 14 TVSDPRTHPKGYTEYKVTAQFISKKDPEDVKEVVVWKRYSDFRKLHGDLAYTHRNLFRRL 73
T+ DP T++K +IS K +V V +RY F L+ LA
Sbjct: 279 TIDDPTKQ----TKFKGMKSYISYKLVPTHTQVPVHRRYKHFDWLYARLA---------- 324
Query: 74 EEFPAF-----PRAQVFGRFEASVIEERRKG 99
E+FP P Q GRFE I +RRKG
Sbjct: 325 EKFPVISVPHLPEKQATGRFEEDFISKRRKG 355
>gi|26051204 calcium/calmodulin-dependent protein kinase II beta
isoform 1 [Homo sapiens]
Length = 666
Score = 37.0 bits (84), Expect = 0.017
Identities = 35/115 (30%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 142 PPPLIPTPPPDDPRLSQLLPAERR--GLEELEVPVD--PPP----------SSPAQEALD 187
P P P P P PR+S +L + RR G E E P+ PPP SSP+ D
Sbjct: 437 PAPFSPLPAPS-PRISDILNSVRRGSGTPEAEGPLSAGPPPCLSPALLGPLSSPSPRISD 495
Query: 188 LLFNCESTEEASGSP-ARGPLTEAELALFDPFSKEGDPLPARQEGVKKKAAEYLK 241
+L S SG+P A GP P P P+R++ + K + ++
Sbjct: 496 IL---NSVRRGSGTPEAEGPSPVGPPPCPSPTIPGPLPTPSRKQEIIKTTEQLIE 547
>gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 36.2 bits (82), Expect = 0.029
Identities = 38/139 (27%), Positives = 46/139 (33%), Gaps = 29/139 (20%)
Query: 132 LEVSRDLHILPPPLIPTPP---PDDPRLSQLLPAERRGLEELEVPVDPPPSSP------- 181
LE H L P IPTPP P P L+ L P + P P P+SP
Sbjct: 194 LEALSPPHTLSSPSIPTPPDFIPPAPPLAFLAPPP----PPVPAPAPPAPASPHTVGTRL 249
Query: 182 ------AQEALDLLFNCESTEEASGSPARGPLTEAELAL---------FDPFSKEGDPLP 226
+ D+ N E SP R P AL F K P P
Sbjct: 250 FPPGGVTKWKSDVALNGRQAEATRASPPRSPAEPKGSALGPNPEPHLTFPRSFKVPPPTP 309
Query: 227 ARQEGVKKKAAEYLKRAEE 245
R + + A+ R EE
Sbjct: 310 VRTSSIPVQEAQEAPRKEE 328
>gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 36.2 bits (82), Expect = 0.029
Identities = 38/139 (27%), Positives = 46/139 (33%), Gaps = 29/139 (20%)
Query: 132 LEVSRDLHILPPPLIPTPP---PDDPRLSQLLPAERRGLEELEVPVDPPPSSP------- 181
LE H L P IPTPP P P L+ L P + P P P+SP
Sbjct: 194 LEALSPPHTLSSPSIPTPPDFIPPAPPLAFLAPPP----PPVPAPAPPAPASPHTVGTRL 249
Query: 182 ------AQEALDLLFNCESTEEASGSPARGPLTEAELAL---------FDPFSKEGDPLP 226
+ D+ N E SP R P AL F K P P
Sbjct: 250 FPPGGVTKWKSDVALNGRQAEATRASPPRSPAEPKGSALGPNPEPHLTFPRSFKVPPPTP 309
Query: 227 ARQEGVKKKAAEYLKRAEE 245
R + + A+ R EE
Sbjct: 310 VRTSSIPVQEAQEAPRKEE 328
>gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo
sapiens]
Length = 1188
Score = 36.2 bits (82), Expect = 0.029
Identities = 38/139 (27%), Positives = 46/139 (33%), Gaps = 29/139 (20%)
Query: 132 LEVSRDLHILPPPLIPTPP---PDDPRLSQLLPAERRGLEELEVPVDPPPSSP------- 181
LE H L P IPTPP P P L+ L P + P P P+SP
Sbjct: 194 LEALSPPHTLSSPSIPTPPDFIPPAPPLAFLAPPP----PPVPAPAPPAPASPHTVGTRL 249
Query: 182 ------AQEALDLLFNCESTEEASGSPARGPLTEAELAL---------FDPFSKEGDPLP 226
+ D+ N E SP R P AL F K P P
Sbjct: 250 FPPGGVTKWKSDVALNGRQAEATRASPPRSPAEPKGSALGPNPEPHLTFPRSFKVPPPTP 309
Query: 227 ARQEGVKKKAAEYLKRAEE 245
R + + A+ R EE
Sbjct: 310 VRTSSIPVQEAQEAPRKEE 328
>gi|23111036 sorting nexin 1 isoform c [Homo sapiens]
Length = 474
Score = 36.2 bits (82), Expect = 0.029
Identities = 38/141 (26%), Positives = 59/141 (41%), Gaps = 20/141 (14%)
Query: 4 QAKDDFLRHYTVSDPRTHPKG---YTEYKVTAQFISKKDPEDVKEVVVWKRYSDFRKLHG 60
+ +D F ++DP G Y YKVT Q + K+ V +R+SDF L+
Sbjct: 138 EQEDQFDLTVGITDPEKIGDGMNAYVAYKVTTQ--TSLPLFRSKQFAVKRRFSDFLGLYE 195
Query: 61 DLAYTH-RNLFRRLEEFPAFPRAQVFGRFEASV----------IEERRKGAEDLLRFTVH 109
L+ H +N F P P + G + V +E+RR E L+ V+
Sbjct: 196 KLSEKHSQNGFI----VPPPPEKSLIGMTKVKVGKEDSSSAEFLEKRRAALERYLQRIVN 251
Query: 110 IPALNNSPQLKEFFRGGEVTR 130
P + P ++EF E+ R
Sbjct: 252 HPTMLQDPDVREFLEKEELPR 272
>gi|23111034 sorting nexin 1 isoform a [Homo sapiens]
Length = 522
Score = 36.2 bits (82), Expect = 0.029
Identities = 38/141 (26%), Positives = 59/141 (41%), Gaps = 20/141 (14%)
Query: 4 QAKDDFLRHYTVSDPRTHPKG---YTEYKVTAQFISKKDPEDVKEVVVWKRYSDFRKLHG 60
+ +D F ++DP G Y YKVT Q + K+ V +R+SDF L+
Sbjct: 138 EQEDQFDLTVGITDPEKIGDGMNAYVAYKVTTQ--TSLPLFRSKQFAVKRRFSDFLGLYE 195
Query: 61 DLAYTH-RNLFRRLEEFPAFPRAQVFGRFEASV----------IEERRKGAEDLLRFTVH 109
L+ H +N F P P + G + V +E+RR E L+ V+
Sbjct: 196 KLSEKHSQNGFI----VPPPPEKSLIGMTKVKVGKEDSSSAEFLEKRRAALERYLQRIVN 251
Query: 110 IPALNNSPQLKEFFRGGEVTR 130
P + P ++EF E+ R
Sbjct: 252 HPTMLQDPDVREFLEKEELPR 272
>gi|24308352 DMRT-like family B with proline-rich C-terminal, 1
[Homo sapiens]
Length = 342
Score = 36.2 bits (82), Expect = 0.029
Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 9/88 (10%)
Query: 125 GGEVTRPLEVSRDLHILPPPLIPTPP-PDDPRLSQLLPAERRGLEELEVPVDPPPSSPAQ 183
GG V+ P + + LPPP P PP P P Q LP +P PPP P+
Sbjct: 248 GGLVSEPGGDFQPSYYLPPPPPPLPPLPPLPPQPQFLPPGYLSALHF-LPPPPPPPPPSS 306
Query: 184 EALDLLFNC-------ESTEEASGSPAR 204
+L +LF+ + E SG P++
Sbjct: 307 FSLTVLFDTDKENTDDQDAEVLSGEPSQ 334
Score = 30.0 bits (66), Expect = 2.1
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Query: 138 LHILPPPLIPTPPPDDPRLSQLLPAERRGLEELEVPV-DPPPSSPAQE 184
LH LPPP P PPP L+ L ++ ++ + V PS P+ +
Sbjct: 292 LHFLPPP-PPPPPPSSFSLTVLFDTDKENTDDQDAEVLSGEPSQPSSQ 338
>gi|15812226 transcriptional regulating factor 1 [Homo sapiens]
Length = 1200
Score = 35.4 bits (80), Expect = 0.049
Identities = 37/154 (24%), Positives = 60/154 (38%), Gaps = 19/154 (12%)
Query: 100 AEDLLRFTVHIPALNNSPQLKEFFR--GGEVTRP-LEVSRDLHILPP-PLIPTPPPDDPR 155
A++ L ++ + N P L R GG P L+ +LPP P P PPP P
Sbjct: 508 AKNKLTCSICLKEFKNLPALNGHMRSHGGMRASPNLKQEEGEKVLPPQPQPPLPPPPPPP 567
Query: 156 LSQLLPAERRGLEELEVPVDPP----PSSPAQEALDLLFNCESTEEASGSPARGPLTEAE 211
LP E L + +PV P P P+ + N ++ +++ E
Sbjct: 568 PPPQLPPEAESLTPMVMPVSVPVKLLPPKPSSQGFT---NSTVAAPSARDKPASSMSDDE 624
Query: 212 LALFDPFSKEGDPLPARQEGVKKKAAEYLKRAEE 245
+ + + +P + + KA E LK +E
Sbjct: 625 MPVLE--------IPRKHQPSVPKAEEPLKTVQE 650
>gi|157502171 sorting nexin 19 [Homo sapiens]
Length = 992
Score = 35.0 bits (79), Expect = 0.064
Identities = 35/134 (26%), Positives = 54/134 (40%), Gaps = 16/134 (11%)
Query: 50 KRYSDFRKLHG------DLAYTHRNLFRRLEEFPAFPRAQVFGRFEASVIEERRKGAEDL 103
+RY +F L DL +N+ + FP P FG ++ +E R+ E
Sbjct: 581 RRYREFLNLQTRLEEKPDLRKFIKNVKGPKKLFPDLP----FGNMDSDRVEARKSLLESF 636
Query: 104 LRFTVHIPALNNSPQLKEFF------RGGEVTRPLEVSRDLHILPPPLIPTPPPDDPRLS 157
L+ IP + NS +++EF R V +P VSR ++ ++ T PR
Sbjct: 637 LKQLCAIPEIANSEEVQEFLALNTDARIAFVKKPFMVSRIDKMVVSAIVDTLKTAFPRSE 696
Query: 158 QLLPAERRGLEELE 171
P E E E
Sbjct: 697 PQSPTEELSEAETE 710
>gi|13899309 ribosomal protein S6 kinase-like 1 [Homo sapiens]
Length = 541
Score = 35.0 bits (79), Expect = 0.064
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 223 DPLPARQEGVKKKAAEYLKRAEEILRLHLSQ 253
DP R+E VK K +YL+RAEEI HL +
Sbjct: 90 DPNKERREAVKLKITKYLRRAEEIFNCHLQR 120
>gi|12597625 activating transcription factor 5 [Homo sapiens]
Length = 282
Score = 34.7 bits (78), Expect = 0.083
Identities = 35/133 (26%), Positives = 47/133 (35%), Gaps = 26/133 (19%)
Query: 142 PPPLIPTPPPDDPRLSQLLPA-------------------------ERRGLEELEVPVDP 176
PPPL P P P P L LP+ E G+ L P P
Sbjct: 127 PPPLPPPPLPPAPSLPLSLPSFDLPQPPVLDTLDLLAIYCRNEAGQEEVGMPPLPPPQQP 186
Query: 177 PPSSPAQEA-LDLLFNCESTEEASGSPARGPLTEAELALFDPFSKEGDPLPARQEGVKKK 235
PP SP Q + L + +T R A L EG+ L +G++ +
Sbjct: 187 PPPSPPQPSRLAPYPHPATTRGDRKQKKRDQNKSAALRYRQRKRAEGEALEGECQGLEAR 246
Query: 236 AAEYLKRAEEILR 248
E +RAE + R
Sbjct: 247 NRELKERAESVER 259
Score = 33.1 bits (74), Expect = 0.24
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 5/46 (10%)
Query: 141 LPPPLIPTP---PPDDPRLSQLLPAERRGLEE--LEVPVDPPPSSP 181
LPP +P P PPD ++ LL E +E+ L+ P PPPS P
Sbjct: 83 LPPGTLPQPSPTPPDLEAMASLLKKELEQMEDFFLDAPPLPPPSPP 128
Score = 28.9 bits (63), Expect = 4.6
Identities = 36/126 (28%), Positives = 50/126 (39%), Gaps = 17/126 (13%)
Query: 130 RPLEVSRDLHILPPPLIPTPPPDDPRLSQLLPAERRGLEELEVPVDPPPSSPAQEALDLL 189
+ LE D + PPL P PP P L PA L +P P P + LDLL
Sbjct: 107 KELEQMEDFFLDAPPLPPPSPPPLPP-PPLPPAPSL---PLSLPSFDLPQPPVLDTLDLL 162
Query: 190 -FNC--ESTEEASGSPARGPLTE---------AELALF-DPFSKEGDPLPARQEGVKKKA 236
C E+ +E G P P + + LA + P + GD +++ K A
Sbjct: 163 AIYCRNEAGQEEVGMPPLPPPQQPPPPSPPQPSRLAPYPHPATTRGDRKQKKRDQNKSAA 222
Query: 237 AEYLKR 242
Y +R
Sbjct: 223 LRYRQR 228
>gi|23111055 sorting nexin 7 isoform b [Homo sapiens]
Length = 336
Score = 34.7 bits (78), Expect = 0.083
Identities = 36/123 (29%), Positives = 47/123 (38%), Gaps = 15/123 (12%)
Query: 6 KDDFLRHYTVSDPRTHPKGYTEYKVTAQFISK--KDPEDVKEVVVWKRYSDFRKLHGDLA 63
KD F+ TV +P +H + +T + I+K + D E V +RY DF L G L
Sbjct: 30 KDLFI---TVDEPESHVTTIETF-ITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLE 85
Query: 64 YTHRNLFRRLEEFPAFPRAQV----FGRFEASVIEERRKGAEDLLRFTVHIPALNNSPQL 119
H L P P + RF IE RRK L P L +
Sbjct: 86 EAHPTLI-----IPPLPEKFIVKGMVERFNDDFIETRRKALHKFLNRIADHPTLTFNEDF 140
Query: 120 KEF 122
K F
Sbjct: 141 KIF 143
>gi|194294540 sorting nexin 7 isoform a [Homo sapiens]
Length = 451
Score = 34.7 bits (78), Expect = 0.083
Identities = 36/123 (29%), Positives = 47/123 (38%), Gaps = 15/123 (12%)
Query: 6 KDDFLRHYTVSDPRTHPKGYTEYKVTAQFISK--KDPEDVKEVVVWKRYSDFRKLHGDLA 63
KD F+ TV +P +H + +T + I+K + D E V +RY DF L G L
Sbjct: 94 KDLFI---TVDEPESHVTTIETF-ITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLE 149
Query: 64 YTHRNLFRRLEEFPAFPRAQV----FGRFEASVIEERRKGAEDLLRFTVHIPALNNSPQL 119
H L P P + RF IE RRK L P L +
Sbjct: 150 EAHPTLI-----IPPLPEKFIVKGMVERFNDDFIETRRKALHKFLNRIADHPTLTFNEDF 204
Query: 120 KEF 122
K F
Sbjct: 205 KIF 207
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.137 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,277,062
Number of Sequences: 37866
Number of extensions: 719633
Number of successful extensions: 4725
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 226
Number of HSP's that attempted gapping in prelim test: 3967
Number of HSP's gapped (non-prelim): 788
length of query: 256
length of database: 18,247,518
effective HSP length: 100
effective length of query: 156
effective length of database: 14,460,918
effective search space: 2255903208
effective search space used: 2255903208
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.