Guide to the Human Genome
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Name: PRG2 Sequence: fasta or formatted (222aa) NCBI GI: 46276889
Description:

proteoglycan 2 preproprotein

Referenced in:

Neutrophils, Eosinophils, and Basophils

Other entries for this name:
alt prot [746aa] plasticity-related protein 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9         13           2
 C cysteine            5.4         12           1
 D aspartate           3.2          7           1
 E glutamate           9.0         20           5
 F phenylalanine       3.6          8           1
 G glycine             8.1         18           2
 H histidine           2.7          6           1
 I isoleucine          3.6          8           1
 K lysine              2.7          6           2
 L leucine             9.0         20           3
 M methionine          1.4          3           1
 N asparagine          3.2          7           1
 P proline             4.5         10           1
 Q glutamine           4.1          9           1
 R arginine            8.6         19           2
 S serine              7.7         17           1
 T threonine           5.9         13           1
 V valine              5.9         13           2
 W tryptophan          3.6          8           1
 Y tyrosine            2.3          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   proteoglycan 2 preproprotein 
PRG3                  0.424   proteoglycan 3 
LY75                  0.053   lymphocyte antigen 75 
MRC1                  0.047   mannose receptor C type 1 precursor 
MRC1L1                0.047   mannose receptor, C type 1-like 1 
MRC2                  0.047   mannose receptor, C type 2 
REG1B                 0.047   regenerating islet-derived 1 beta precursor 
REG4                  0.038   regenerating islet-derived family, member 4 isoform...
REG4                  0.038   regenerating islet-derived family, member 4 isoform ...
NCAN                  0.038   chondroitin sulfate proteoglycan 3 
REG3A                 0.031   pancreatitis-associated protein precursor 
REG3A                 0.031   pancreatitis-associated protein precursor 
REG3A                 0.031   pancreatitis-associated protein precursor 
CDC2L2                0.031   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.031   cell division cycle 2-like 2 isoform 1 
CDC2L1                0.031   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.031   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.031   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.031   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.031   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.031   cell division cycle 2-like 1 (PITSLRE proteins) isof...
ACAN                  0.029   aggrecan isoform 2 precursor 
FCER2                 0.029   Fc fragment of IgE, low affinity II, receptor for (C...
PLA2R1                0.029   phospholipase A2 receptor 1 isoform 1 precursor [Hom...
ANP32B                0.029   acidic (leucine-rich) nuclear phosphoprotein 32 famil...
C9orf75               0.027   hypothetical protein LOC286262 isoform 2 
C9orf75               0.027   hypothetical protein LOC286262 isoform 1 
PLA2R1                0.024   phospholipase A2 receptor 1 isoform 2 precursor [Hom...
COLEC12               0.022   collectin sub-family member 12 
LAYN                  0.022   layilin 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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