Guide to the Human Genome
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Name: FCER2 Sequence: fasta or formatted (321aa) NCBI GI: 20149533
Description:

Fc fragment of IgE, low affinity II, receptor for (CD23A)

Referenced in:

Fc Receptors
Lectin Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9         19           2
 C cysteine            3.1         10           2
 D aspartate           5.6         18           2
 E glutamate           9.0         29           2
 F phenylalanine       2.2          7           1
 G glycine             6.9         22           1
 H histidine           2.8          9           2
 I isoleucine          2.2          7           1
 K lysine              4.0         13           1
 L leucine            11.5         37           4
 M methionine          2.2          7           2
 N asparagine          3.4         11           1
 P proline             4.0         13           2
 Q glutamine           6.5         21           2
 R arginine            7.2         23           3
 S serine              9.7         31           2
 T threonine           4.7         15           2
 V valine              4.0         13           1
 W tryptophan          3.4         11           1
 Y tyrosine            1.6          5           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Fc fragment of IgE, low affinity II, receptor for (C... 
CLEC4G                0.151   C-type lectin domain family 4, member G 
CLEC4M                0.135   C-type lectin domain family 4, member M isoform 11 ...
CLEC4M                0.134   C-type lectin domain family 4, member M isoform 9 [...
CLEC4M                0.132   C-type lectin domain family 4, member M isoform 12 ...
CLEC4M                0.132   C-type lectin domain family 4, member M isoform 2 [...
CLEC4M                0.132   C-type lectin domain family 4, member M isoform 8 [...
CLEC4M                0.132   C-type lectin domain family 4, member M isoform 1 [H...
CLEC4M                0.132   C-type lectin domain family 4, member M isoform 7 [...
ASGR2                 0.126   asialoglycoprotein receptor 2 isoform b 
CLEC10A               0.126   C-type lectin, superfamily member 14 isoform 2 [Homo...
ASGR2                 0.124   asialoglycoprotein receptor 2 isoform c 
ASGR2                 0.124   asialoglycoprotein receptor 2 isoform a 
ASGR2                 0.124   asialoglycoprotein receptor 2 isoform a 
CD209                 0.120   CD209 molecule isoform 7 
CD209                 0.120   CD209 molecule isoform 3 
CD209                 0.120   CD209 molecule isoform 6 
CD209                 0.120   CD209 molecule isoform 1 
ASGR1                 0.120   asialoglycoprotein receptor 1 
CD209                 0.118   CD209 molecule isoform 5 
CLEC10A               0.112   C-type lectin, superfamily member 14 isoform 1 [Homo...
CD209                 0.110   CD209 molecule isoform 4 
COLEC12               0.107   collectin sub-family member 12 
NCAN                  0.107   chondroitin sulfate proteoglycan 3 
MRC2                  0.102   mannose receptor, C type 2 
ACAN                  0.101   aggrecan isoform 2 precursor 
CD209                 0.099   CD209 molecule isoform 8 
BCAN                  0.099   brevican isoform 1 
ACAN                  0.099   aggrecan isoform 1 precursor 
MRC1                  0.096   mannose receptor C type 1 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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