Guide to the Human Genome
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Name: REG4 Sequence: fasta or formatted (158aa) NCBI GI: 226823233
Description:

regenerating islet-derived family, member 4 isoform 1

Referenced in:

Pancreas and Insulin

Other entries for this name:
alt mRNA [158aa] regenerating islet-derived family, member 4 isoform 1
alt prot [134aa] regenerating islet-derived family, member 4 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.3         10           1
 C cysteine            4.4          7           1
 D aspartate           2.5          4           1
 E glutamate           3.8          6           1
 F phenylalanine       2.5          4           1
 G glycine             7.6         12           2
 H histidine           3.2          5           1
 I isoleucine          5.1          8           2
 K lysine              5.7          9           1
 L leucine            10.1         16           5
 M methionine          3.8          6           1
 N asparagine          5.7          9           3
 P proline             3.2          5           1
 Q glutamine           5.1          8           2
 R arginine            6.3         10           1
 S serine             12.0         19           2
 T threonine           1.9          3           1
 V valine              0.6          1           1
 W tryptophan          4.4          7           1
 Y tyrosine            5.7          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   regenerating islet-derived family, member 4 isoform... 
REG4                  1.000   regenerating islet-derived family, member 4 isoform ...
REG4                  0.300   regenerating islet-derived family, member 4 isoform...
REG1B                 0.221   regenerating islet-derived 1 beta precursor 
REG1A                 0.199   regenerating islet-derived 1 alpha precursor 
REG3A                 0.186   pancreatitis-associated protein precursor 
REG3A                 0.186   pancreatitis-associated protein precursor 
REG3A                 0.186   pancreatitis-associated protein precursor 
REG3G                 0.170   regenerating islet-derived 3 gamma 
REG3G                 0.170   regenerating islet-derived 3 gamma 
BCAN                  0.155   brevican isoform 1 
CLEC10A               0.145   C-type lectin, superfamily member 14 isoform 1 [Homo...
CLEC10A               0.145   C-type lectin, superfamily member 14 isoform 2 [Homo...
VCAN                  0.139   versican isoform 2 
VCAN                  0.139   versican isoform 1 
ASGR2                 0.132   asialoglycoprotein receptor 2 isoform c 
ASGR2                 0.132   asialoglycoprotein receptor 2 isoform b 
ASGR2                 0.132   asialoglycoprotein receptor 2 isoform a 
ASGR2                 0.132   asialoglycoprotein receptor 2 isoform a 
CLEC4M                0.132   C-type lectin domain family 4, member M isoform 9 [...
CLEC4M                0.132   C-type lectin domain family 4, member M isoform 7 [...
CLEC4M                0.132   C-type lectin domain family 4, member M isoform 12 ...
CLEC4M                0.132   C-type lectin domain family 4, member M isoform 2 [...
CLEC4M                0.132   C-type lectin domain family 4, member M isoform 8 [...
CLEC4M                0.132   C-type lectin domain family 4, member M isoform 11 ...
CLEC4M                0.132   C-type lectin domain family 4, member M isoform 1 [H...
ASGR1                 0.132   asialoglycoprotein receptor 1 
CD209                 0.129   CD209 molecule isoform 8 
CD209                 0.129   CD209 molecule isoform 3 
CD209                 0.129   CD209 molecule isoform 7 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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