LAYN 25266

Name: LAYN	Sequence: fasta or formatted (374aa)		NCBI GI: 30520331
Description: layilin		Referenced in: Lectin Families
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.6 21 2 C cysteine 3.2 12 1 D aspartate 5.9 22 2 E glutamate 9.4 35 2 F phenylalanine 3.2 12 1 G glycine 6.1 23 2 H histidine 1.1 4 1 I isoleucine 4.5 17 1 K lysine 4.8 18 2 L leucine 7.8 29 5 M methionine 1.9 7 1 N asparagine 4.3 16 2 P proline 6.1 23 1 Q glutamine 4.3 16 1 R arginine 6.1 23 3 S serine 8.0 30 1 T threonine 5.1 19 2 V valine 7.0 26 2 W tryptophan 2.1 8 1 Y tyrosine 3.5 13 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 layilin CHODL 0.292 chondrolectin precursor MRC1 0.055 mannose receptor C type 1 precursor MRC1L1 0.055 mannose receptor, C type 1-like 1 MRC2 0.052 mannose receptor, C type 2 NCAN 0.052 chondroitin sulfate proteoglycan 3 VCAN 0.049 versican isoform 2 VCAN 0.049 versican isoform 1 CLEC3A 0.043 C-type lectin domain family 3 member A CD93 0.041 CD93 antigen precursor COLEC12 0.040 collectin sub-family member 12 ACAN 0.039 aggrecan isoform 2 precursor CLEC18A 0.039 secretory protein LOC348174 CLEC18A 0.039 secretory protein LOC348174 ACAN 0.039 aggrecan isoform 1 precursor CLEC18B 0.037 C-type lectin domain family 18, member B BCAN 0.036 brevican isoform 1 FCER2 0.036 Fc fragment of IgE, low affinity II, receptor for (C... CLEC18C 0.036 mannose receptor-like CD209 0.033 CD209 molecule isoform 8 CD209 0.033 CD209 molecule isoform 3 CD209 0.033 CD209 molecule isoform 7 CD209 0.033 CD209 molecule isoform 6 CD209 0.033 CD209 molecule isoform 5 CD209 0.033 CD209 molecule isoform 1 CLEC4M 0.031 C-type lectin domain family 4, member M isoform 7 [... SFTPA2 0.031 surfactant protein A2 CLEC4M 0.031 C-type lectin domain family 4, member M isoform 11 ... SFTPA1B 0.031 surfactant, pulmonary-associated protein A1B SFTPA2B 0.031 surfactant, pulmonary-associated protein A2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.