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Search of human proteins with 46249397
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|46249397 Ras-related GTP binding B long isoform [Homo
sapiens]
(374 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|46249397 Ras-related GTP binding B long isoform [Homo sapiens] 748 0.0
gi|46249395 Ras-related GTP binding B short isoform [Homo sapiens] 680 0.0
gi|5729999 Ras-related GTP binding A [Homo sapiens] 600 e-172
gi|11034847 Ras-related GTP binding D [Homo sapiens] 77 3e-14
gi|11995472 Ras-related GTP binding C [Homo sapiens] 72 6e-13
gi|167830488 olfactory receptor, family 2, subfamily S, member 2... 35 0.084
gi|8922601 ADP-ribosylation factor-like 10C [Homo sapiens] 35 0.14
gi|5453555 ras-related nuclear protein [Homo sapiens] 34 0.19
gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene fa... 34 0.24
gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens] 34 0.24
gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens] 34 0.24
gi|4506363 RAB13, member RAS oncogene family [Homo sapiens] 33 0.32
gi|12232463 RAB, member RAS oncogene family-like 5 isoform a [Ho... 33 0.32
gi|20270343 ADP-ribosylation factor-like 8A [Homo sapiens] 33 0.32
gi|4502205 ADP-ribosylation factor 4 [Homo sapiens] 33 0.42
gi|148612885 ADP-ribosylation factor-like 2 [Homo sapiens] 33 0.54
gi|4502209 ADP-ribosylation factor 5 [Homo sapiens] 33 0.54
gi|62751417 RAB, member of RAS oncogene family-like 3 [Homo sapi... 33 0.54
gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... 32 0.71
gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... 32 0.71
gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... 32 0.71
gi|13124875 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... 32 0.71
gi|13376574 ADP-ribosylation factor-like 14 [Homo sapiens] 32 0.71
gi|208609962 RAB7, member RAS oncogene family-like 1 isoform 1 [... 32 0.71
gi|4506375 RAB7, member RAS oncogene family-like 1 isoform 1 [Ho... 32 0.71
gi|4757774 ADP-ribosylation factor-like 3 [Homo sapiens] 32 0.71
gi|4758996 Ras-related protein Rab-33A [Homo sapiens] 32 0.71
gi|15718763 c-K-ras2 protein isoform a precursor [Homo sapiens] 32 0.93
gi|15718761 c-K-ras2 protein isoform b precursor [Homo sapiens] 32 0.93
gi|10880989 RAB18, member RAS oncogene family [Homo sapiens] 32 0.93
>gi|46249397 Ras-related GTP binding B long isoform [Homo sapiens]
Length = 374
Score = 748 bits (1930), Expect = 0.0
Identities = 374/374 (100%), Positives = 374/374 (100%)
Query: 1 MEESDSEKTTEKENLGPRMDPPLGEPEGSLGWVLPNTAMKKKVLLMGKSGSGKTSMRSII 60
MEESDSEKTTEKENLGPRMDPPLGEPEGSLGWVLPNTAMKKKVLLMGKSGSGKTSMRSII
Sbjct: 1 MEESDSEKTTEKENLGPRMDPPLGEPEGSLGWVLPNTAMKKKVLLMGKSGSGKTSMRSII 60
Query: 61 FANYIARDTRRLGATILDRIHSLQINSSLSTYSLVDSVGNTKTFDVEHSHVRFLGNLVLN 120
FANYIARDTRRLGATILDRIHSLQINSSLSTYSLVDSVGNTKTFDVEHSHVRFLGNLVLN
Sbjct: 61 FANYIARDTRRLGATILDRIHSLQINSSLSTYSLVDSVGNTKTFDVEHSHVRFLGNLVLN 120
Query: 121 LWDCGGQDTFMENYFTSQRDNIFRNVEVLIYVFDVESRELEKDMHYYQSCLEAILQNSPD 180
LWDCGGQDTFMENYFTSQRDNIFRNVEVLIYVFDVESRELEKDMHYYQSCLEAILQNSPD
Sbjct: 121 LWDCGGQDTFMENYFTSQRDNIFRNVEVLIYVFDVESRELEKDMHYYQSCLEAILQNSPD 180
Query: 181 AKIFCLVHKMDLVQEDQRDLIFKEREEDLRRLSRPLECSCFRTSIWDETLYKAWSSIVYQ 240
AKIFCLVHKMDLVQEDQRDLIFKEREEDLRRLSRPLECSCFRTSIWDETLYKAWSSIVYQ
Sbjct: 181 AKIFCLVHKMDLVQEDQRDLIFKEREEDLRRLSRPLECSCFRTSIWDETLYKAWSSIVYQ 240
Query: 241 LIPNVQQLEMNLRNFAEIIEADEVLLFERATFLVISHYQCKEQRDAHRFEKISNIIKQFK 300
LIPNVQQLEMNLRNFAEIIEADEVLLFERATFLVISHYQCKEQRDAHRFEKISNIIKQFK
Sbjct: 241 LIPNVQQLEMNLRNFAEIIEADEVLLFERATFLVISHYQCKEQRDAHRFEKISNIIKQFK 300
Query: 301 LSCSKLAASFQSMEVRNSNFAAFIDIFTSNTYVMVVMSDPSIPSAATLINIRNARKHFEK 360
LSCSKLAASFQSMEVRNSNFAAFIDIFTSNTYVMVVMSDPSIPSAATLINIRNARKHFEK
Sbjct: 301 LSCSKLAASFQSMEVRNSNFAAFIDIFTSNTYVMVVMSDPSIPSAATLINIRNARKHFEK 360
Query: 361 LERVDGPKQCLLMR 374
LERVDGPKQCLLMR
Sbjct: 361 LERVDGPKQCLLMR 374
>gi|46249395 Ras-related GTP binding B short isoform [Homo sapiens]
Length = 346
Score = 680 bits (1754), Expect = 0.0
Identities = 346/374 (92%), Positives = 346/374 (92%), Gaps = 28/374 (7%)
Query: 1 MEESDSEKTTEKENLGPRMDPPLGEPEGSLGWVLPNTAMKKKVLLMGKSGSGKTSMRSII 60
MEESDSEKTTEKENLGPRMDPPLGEPEGSLGWVLPNTAMKKKVLLMGKSGSGKTSMRSII
Sbjct: 1 MEESDSEKTTEKENLGPRMDPPLGEPEGSLGWVLPNTAMKKKVLLMGKSGSGKTSMRSII 60
Query: 61 FANYIARDTRRLGATILDRIHSLQINSSLSTYSLVDSVGNTKTFDVEHSHVRFLGNLVLN 120
FANYIARDTRRLGATI DVEHSHVRFLGNLVLN
Sbjct: 61 FANYIARDTRRLGATI----------------------------DVEHSHVRFLGNLVLN 92
Query: 121 LWDCGGQDTFMENYFTSQRDNIFRNVEVLIYVFDVESRELEKDMHYYQSCLEAILQNSPD 180
LWDCGGQDTFMENYFTSQRDNIFRNVEVLIYVFDVESRELEKDMHYYQSCLEAILQNSPD
Sbjct: 93 LWDCGGQDTFMENYFTSQRDNIFRNVEVLIYVFDVESRELEKDMHYYQSCLEAILQNSPD 152
Query: 181 AKIFCLVHKMDLVQEDQRDLIFKEREEDLRRLSRPLECSCFRTSIWDETLYKAWSSIVYQ 240
AKIFCLVHKMDLVQEDQRDLIFKEREEDLRRLSRPLECSCFRTSIWDETLYKAWSSIVYQ
Sbjct: 153 AKIFCLVHKMDLVQEDQRDLIFKEREEDLRRLSRPLECSCFRTSIWDETLYKAWSSIVYQ 212
Query: 241 LIPNVQQLEMNLRNFAEIIEADEVLLFERATFLVISHYQCKEQRDAHRFEKISNIIKQFK 300
LIPNVQQLEMNLRNFAEIIEADEVLLFERATFLVISHYQCKEQRDAHRFEKISNIIKQFK
Sbjct: 213 LIPNVQQLEMNLRNFAEIIEADEVLLFERATFLVISHYQCKEQRDAHRFEKISNIIKQFK 272
Query: 301 LSCSKLAASFQSMEVRNSNFAAFIDIFTSNTYVMVVMSDPSIPSAATLINIRNARKHFEK 360
LSCSKLAASFQSMEVRNSNFAAFIDIFTSNTYVMVVMSDPSIPSAATLINIRNARKHFEK
Sbjct: 273 LSCSKLAASFQSMEVRNSNFAAFIDIFTSNTYVMVVMSDPSIPSAATLINIRNARKHFEK 332
Query: 361 LERVDGPKQCLLMR 374
LERVDGPKQCLLMR
Sbjct: 333 LERVDGPKQCLLMR 346
>gi|5729999 Ras-related GTP binding A [Homo sapiens]
Length = 313
Score = 600 bits (1548), Expect = e-172
Identities = 307/341 (90%), Positives = 310/341 (90%), Gaps = 28/341 (8%)
Query: 34 LPNTAMKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATILDRIHSLQINSSLSTYS 93
+PNTAMKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATI
Sbjct: 1 MPNTAMKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATI----------------- 43
Query: 94 LVDSVGNTKTFDVEHSHVRFLGNLVLNLWDCGGQDTFMENYFTSQRDNIFRNVEVLIYVF 153
DVEHSHVRFLGNLVLNLWDCGGQDTFMENYFTSQRDNIFRNVEVLIYVF
Sbjct: 44 -----------DVEHSHVRFLGNLVLNLWDCGGQDTFMENYFTSQRDNIFRNVEVLIYVF 92
Query: 154 DVESRELEKDMHYYQSCLEAILQNSPDAKIFCLVHKMDLVQEDQRDLIFKEREEDLRRLS 213
DVESRELEKDMHYYQSCLEAILQNSPDAKIFCLVHKMDLVQEDQRDLIFKEREEDLRRLS
Sbjct: 93 DVESRELEKDMHYYQSCLEAILQNSPDAKIFCLVHKMDLVQEDQRDLIFKEREEDLRRLS 152
Query: 214 RPLECSCFRTSIWDETLYKAWSSIVYQLIPNVQQLEMNLRNFAEIIEADEVLLFERATFL 273
RPLEC+CFRTSIWDETLYKAWSSIVYQLIPNVQQLEMNLRNFA+IIEADEVLLFERATFL
Sbjct: 153 RPLECACFRTSIWDETLYKAWSSIVYQLIPNVQQLEMNLRNFAQIIEADEVLLFERATFL 212
Query: 274 VISHYQCKEQRDAHRFEKISNIIKQFKLSCSKLAASFQSMEVRNSNFAAFIDIFTSNTYV 333
VISHYQCKEQRD HRFEKISNIIKQFKLSCSKLAASFQSMEVRNSNFAAFIDIFTSNTYV
Sbjct: 213 VISHYQCKEQRDVHRFEKISNIIKQFKLSCSKLAASFQSMEVRNSNFAAFIDIFTSNTYV 272
Query: 334 MVVMSDPSIPSAATLINIRNARKHFEKLERVDGPKQCLLMR 374
MVVMSDPSIPSAATLINIRNARKHFEKLERVDGPK LLMR
Sbjct: 273 MVVMSDPSIPSAATLINIRNARKHFEKLERVDGPKHSLLMR 313
>gi|11034847 Ras-related GTP binding D [Homo sapiens]
Length = 400
Score = 77.0 bits (188), Expect = 3e-14
Identities = 74/292 (25%), Positives = 129/292 (44%), Gaps = 48/292 (16%)
Query: 2 EESDSEKTTEKENL--------GPRM---DPPLGEPEGSLGWVLP-NTAMKKKVLLMGKS 49
+E D+E+ E++ L GP DP G EG L + P +T +K ++LLMG
Sbjct: 12 DEDDAEEEEEEDELVGLADYGDGPDSSDADPDSGTEEGVLDFSDPFSTEVKPRILLMGLR 71
Query: 50 GSGKTSMRSIIFANYIARDTRRLGATILDRIHSLQINSSLSTYSLVDSVGNTKTFDVEHS 109
SGK+S++ ++F H + N +L ++S DV +S
Sbjct: 72 RSGKSSIQKVVF-------------------HKMSPNETL----FLESTNKICREDVSNS 108
Query: 110 HVRFLGNLVLNLWDCGGQDTFMENYFTSQRDNIFRNVEVLIYVFDVESRELEKDMHYYQS 169
+ +WD GQ F + F + IFR LI+V D + +E + +
Sbjct: 109 SF-----VNFQIWDFPGQIDFFDPTFDYEM--IFRGTGALIFVIDSQDDYMEALARLHLT 161
Query: 170 CLEAILQNSPDAKIFCLVHKMDLVQED-----QRDLIFKEREEDLRRLSRPLECSCFRTS 224
A N+ D +HK+D + +D QRD+ + ++ + S + TS
Sbjct: 162 VTRAYKVNT-DINFEVFIHKVDGLSDDHKIETQRDIHQRANDDLADAGLEKIHLSFYLTS 220
Query: 225 IWDETLYKAWSSIVYQLIPNVQQLEMNLRNFAEIIEADEVLLFERATFLVIS 276
I+D ++++A+S +V +LIP + LE L F ++ LF+ + + I+
Sbjct: 221 IYDHSIFEAFSKVVQKLIPQLPTLENLLNIFISNSGIEKAFLFDVVSKIYIA 272
>gi|11995472 Ras-related GTP binding C [Homo sapiens]
Length = 399
Score = 72.4 bits (176), Expect = 6e-13
Identities = 64/242 (26%), Positives = 110/242 (45%), Gaps = 36/242 (14%)
Query: 40 KKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATILDRIHSLQINSSLSTYSLVDSVG 99
K ++LLMG SGK+S++ ++F +T L +T ++I+ I++S
Sbjct: 61 KPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLEST--NKIYKDDISNS----------- 107
Query: 100 NTKTFDVEHSHVRFLGNLVLNLWDCGGQDTFMENYFTSQRDNIFRNVEVLIYVFDVESRE 159
S V F +WD GQ F + F + IFR LIYV D +
Sbjct: 108 ---------SFVNF------QIWDFPGQMDFFDPTFDYEM--IFRGTGALIYVIDAQDDY 150
Query: 160 LEKDMHYYQSCLEAILQNSPDAKIFCLVHKMDLVQED-----QRDLIFKEREEDLRRLSR 214
+E + + +A N PD +HK+D + +D QRD+ + ++
Sbjct: 151 MEALTRLHITVSKAYKVN-PDMNFEVFIHKVDGLSDDHKIETQRDIHQRANDDLADAGLE 209
Query: 215 PLECSCFRTSIWDETLYKAWSSIVYQLIPNVQQLEMNLRNFAEIIEADEVLLFERATFLV 274
L S + TSI+D ++++A+S +V +LIP + LE L F ++ LF+ + +
Sbjct: 210 KLHLSFYLTSIYDHSIFEAFSKVVQKLIPQLPTLENLLNIFISNSGIEKAFLFDVVSKIY 269
Query: 275 IS 276
I+
Sbjct: 270 IA 271
>gi|167830488 olfactory receptor, family 2, subfamily S, member 2
[Homo sapiens]
Length = 319
Score = 35.4 bits (80), Expect = 0.084
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 13/72 (18%)
Query: 274 VISHYQCKEQRDAHRFEKISNIIKQFKLSCSKLAASFQSMEVRNSNFAAFIDIFTSNTYV 333
VI+H+ C+ I+ KL+C+ ++ + SMEV N F +F S +YV
Sbjct: 174 VINHFTCE-------------ILAVLKLACADISINVISMEVTNVIFLGVPVLFISFSYV 220
Query: 334 MVVMSDPSIPSA 345
++ + IPSA
Sbjct: 221 FIITTILRIPSA 232
>gi|8922601 ADP-ribosylation factor-like 10C [Homo sapiens]
Length = 186
Score = 34.7 bits (78), Expect = 0.14
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 11/92 (11%)
Query: 115 GNLVLNLWDCGGQDTFMENYFTSQRDNIFRNVEVLIYVFDVESRE-LEKDMHYYQSCLE- 172
GN+ + +WD GGQ F S + R V ++Y+ D RE +E + + L+
Sbjct: 63 GNVTIKIWDIGGQPR-----FRSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDK 117
Query: 173 AILQNSPDAKIFCLVHKMDLVQE-DQRDLIFK 203
LQ P + L +K DL D++ LI K
Sbjct: 118 PQLQGIP---VLVLGNKRDLPNALDEKQLIEK 146
>gi|5453555 ras-related nuclear protein [Homo sapiens]
Length = 216
Score = 34.3 bits (77), Expect = 0.19
Identities = 30/138 (21%), Positives = 55/138 (39%), Gaps = 33/138 (23%)
Query: 42 KVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATILDRIHSLQINSSLSTYSLVDSVGNT 101
K++L+G G+GKT+ + + ++ AT+ +H L +++
Sbjct: 12 KLVLVGDGGTGKTTF---VKRHLTGEFEKKYVATLGVEVHPLVFHTNR------------ 56
Query: 102 KTFDVEHSHVRFLGNLVLNLWDCGGQDTFMENYFTSQRDNIFRNVEVLIYVFDVESRELE 161
G + N+WD GQ+ F RD + + I +FDV SR
Sbjct: 57 -------------GPIKFNVWDTAGQEKF-----GGLRDGYYIQAQCAIIMFDVTSRVTY 98
Query: 162 KDMHYYQSCLEAILQNSP 179
K++ + L + +N P
Sbjct: 99 KNVPNWHRDLVRVCENIP 116
>gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene
family [Homo sapiens]
Length = 327
Score = 33.9 bits (76), Expect = 0.24
Identities = 46/182 (25%), Positives = 79/182 (43%), Gaps = 48/182 (26%)
Query: 35 PNTAMKK------KVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATILDRIHSLQINSS 88
P +AM K K+LL+G SG GKT + I FA D + N+
Sbjct: 121 PVSAMAKAYDHLFKLLLIGDSGVGKTCL-IIRFAE--------------DNFN----NTY 161
Query: 89 LSTYSLVDSVGNTKTFDVEHSHVRFLGNLVLNLWDCGGQDTFMENYFTSQRDNIFRNVEV 148
+ST + + +T D+E ++ L +WD GQ+ F + +R
Sbjct: 162 ISTIGIDFKI---RTVDIEGKKIK------LQVWDTAGQER-----FKTITTAYYRGAMG 207
Query: 149 LIYVFDVESRELEKDMHYYQSCLEAILQN-SPDAKIFCLVHKMDL-----VQEDQRDLIF 202
+I +D+ EK Q+ +++I++N S + L +K D+ VQ++Q D +
Sbjct: 208 IILAYDITD---EKSFENIQNWMKSIMENASAGVEHLLLGNKCDMEAKRKVQKEQADKLA 264
Query: 203 KE 204
+E
Sbjct: 265 RE 266
>gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens]
Length = 327
Score = 33.9 bits (76), Expect = 0.24
Identities = 46/182 (25%), Positives = 79/182 (43%), Gaps = 48/182 (26%)
Query: 35 PNTAMKK------KVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATILDRIHSLQINSS 88
P +AM K K+LL+G SG GKT + I FA D + N+
Sbjct: 121 PVSAMAKAYDHLFKLLLIGDSGVGKTCL-IIRFAE--------------DNFN----NTY 161
Query: 89 LSTYSLVDSVGNTKTFDVEHSHVRFLGNLVLNLWDCGGQDTFMENYFTSQRDNIFRNVEV 148
+ST + + +T D+E ++ L +WD GQ+ F + +R
Sbjct: 162 ISTIGIDFKI---RTVDIEGKKIK------LQVWDTAGQER-----FKTITTAYYRGAMG 207
Query: 149 LIYVFDVESRELEKDMHYYQSCLEAILQN-SPDAKIFCLVHKMDL-----VQEDQRDLIF 202
+I +D+ EK Q+ +++I++N S + L +K D+ VQ++Q D +
Sbjct: 208 IILAYDITD---EKSFENIQNWMKSIMENASAGVEHLLLGNKCDMEAKRKVQKEQADKLA 264
Query: 203 KE 204
+E
Sbjct: 265 RE 266
>gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens]
Length = 327
Score = 33.9 bits (76), Expect = 0.24
Identities = 46/182 (25%), Positives = 79/182 (43%), Gaps = 48/182 (26%)
Query: 35 PNTAMKK------KVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATILDRIHSLQINSS 88
P +AM K K+LL+G SG GKT + I FA D + N+
Sbjct: 121 PVSAMAKAYDHLFKLLLIGDSGVGKTCL-IIRFAE--------------DNFN----NTY 161
Query: 89 LSTYSLVDSVGNTKTFDVEHSHVRFLGNLVLNLWDCGGQDTFMENYFTSQRDNIFRNVEV 148
+ST + + +T D+E ++ L +WD GQ+ F + +R
Sbjct: 162 ISTIGIDFKI---RTVDIEGKKIK------LQVWDTAGQER-----FKTITTAYYRGAMG 207
Query: 149 LIYVFDVESRELEKDMHYYQSCLEAILQN-SPDAKIFCLVHKMDL-----VQEDQRDLIF 202
+I +D+ EK Q+ +++I++N S + L +K D+ VQ++Q D +
Sbjct: 208 IILAYDITD---EKSFENIQNWMKSIMENASAGVEHLLLGNKCDMEAKRKVQKEQADKLA 264
Query: 203 KE 204
+E
Sbjct: 265 RE 266
>gi|4506363 RAB13, member RAS oncogene family [Homo sapiens]
Length = 203
Score = 33.5 bits (75), Expect = 0.32
Identities = 43/169 (25%), Positives = 74/169 (43%), Gaps = 42/169 (24%)
Query: 42 KVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATILDRIHSLQINSSLSTYSLVDSVGNT 101
K+LL+G SG GKT + I FA D + N+ +ST + +
Sbjct: 10 KLLLIGDSGVGKTCL-IIRFAE--------------DNFN----NTYISTIGIDFKI--- 47
Query: 102 KTFDVEHSHVRFLGNLVLNLWDCGGQDTFMENYFTSQRDNIFRNVEVLIYVFDVESRELE 161
+T D+E ++ L +WD GQ+ F + +R +I V+D+ E
Sbjct: 48 RTVDIEGKKIK------LQVWDTAGQER-----FKTITTAYYRGAMGIILVYDITD---E 93
Query: 162 KDMHYYQSCLEAILQN-SPDAKIFCLVHKMDL-----VQEDQRDLIFKE 204
K Q+ +++I +N S + L +K D+ VQ++Q D + +E
Sbjct: 94 KSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQADKLARE 142
>gi|12232463 RAB, member RAS oncogene family-like 5 isoform a [Homo
sapiens]
Length = 185
Score = 33.5 bits (75), Expect = 0.32
Identities = 31/135 (22%), Positives = 53/135 (39%), Gaps = 34/135 (25%)
Query: 39 MKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATILDRIHSLQINSSLSTYSLVDSV 98
+K K+L +G SGKT + AN++ +S ++ YS V
Sbjct: 2 LKAKILFVGPCESGKT-----VLANFLTE------------------SSDITEYSPTQGV 38
Query: 99 GNTKTFDVEHSHVRFLGN---LVLNLWDCGGQDTFMENYFTSQRDNIFRNVEVLIYVFDV 155
+ + E+ HV LWDCGG + F S + ++ ++ VF+
Sbjct: 39 ---RILEFENPHVTSNNKGTGCEFELWDCGG-----DAKFESCWPALMKDAHGVVIVFNA 90
Query: 156 ESRELEKDMHYYQSC 170
+ K+M + SC
Sbjct: 91 DIPSHRKEMEMWYSC 105
>gi|20270343 ADP-ribosylation factor-like 8A [Homo sapiens]
Length = 186
Score = 33.5 bits (75), Expect = 0.32
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 11/92 (11%)
Query: 115 GNLVLNLWDCGGQDTFMENYFTSQRDNIFRNVEVLIYVFDVESRE-LEKDMHYYQSCLE- 172
GN+ + LWD GGQ F S + R V ++Y+ D +E +E + + L+
Sbjct: 63 GNVTIKLWDIGGQPR-----FRSMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDK 117
Query: 173 AILQNSPDAKIFCLVHKMDLVQE-DQRDLIFK 203
LQ P + L +K DL D+++LI K
Sbjct: 118 PQLQGIP---VLVLGNKRDLPGALDEKELIEK 146
>gi|4502205 ADP-ribosylation factor 4 [Homo sapiens]
Length = 180
Score = 33.1 bits (74), Expect = 0.42
Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 12/136 (8%)
Query: 58 SIIFANYIARDTRRLGATILDRIHSLQINSSLSTYSLVDSVGNTKTFDVEHSHVRFLGNL 117
S +F+ + R+ LD I L +V ++ T F+VE + N+
Sbjct: 6 SSLFSRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIP-TIGFNVETVEYK---NI 61
Query: 118 VLNLWDCGGQDTFMENYFTSQRDNIFRNVEVLIYVFDVESRE-LEKDMHYYQSCLEAILQ 176
+WD GGQD + + F+N + LI+V D RE +++ Q L ++
Sbjct: 62 CFTVWDVGGQDRIRPLW-----KHYFQNTQGLIFVVDSNDRERIQEVADELQKML--LVD 114
Query: 177 NSPDAKIFCLVHKMDL 192
DA + +K DL
Sbjct: 115 ELRDAVLLLFANKQDL 130
>gi|148612885 ADP-ribosylation factor-like 2 [Homo sapiens]
Length = 184
Score = 32.7 bits (73), Expect = 0.54
Identities = 27/100 (27%), Positives = 49/100 (49%), Gaps = 13/100 (13%)
Query: 95 VDSVGNTKTFDVEHSHVRFLGNLVLNLWDCGGQDTFMENYFTSQRDNIFRNVEVLIYVFD 154
+D++ T F+++ R LN+WD GGQ + + +Y+ N F + + LI+V D
Sbjct: 41 IDTISPTLGFNIKTLEHR---GFKLNIWDVGGQKS-LRSYWR----NYFESTDGLIWVVD 92
Query: 155 VESRELEKDMHYYQSCLEAIL--QNSPDAKIFCLVHKMDL 192
R+ +D Q L+++L + A + +K DL
Sbjct: 93 SADRQRMQDC---QRELQSLLVEERLAGATLLIFANKQDL 129
>gi|4502209 ADP-ribosylation factor 5 [Homo sapiens]
Length = 180
Score = 32.7 bits (73), Expect = 0.54
Identities = 34/137 (24%), Positives = 57/137 (41%), Gaps = 14/137 (10%)
Query: 58 SIIFANYIARDTRRLGATILDRIHSLQINSSLSTYSLVDSVGNTKTFDVEHSHVRFLGNL 117
S +F+ + R+ LD I L +V ++ T F+VE + N+
Sbjct: 6 SALFSRIFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIP-TIGFNVETVEYK---NI 61
Query: 118 VLNLWDCGGQDTFMENYFTSQRDNIFRNVEVLIYVFDVESRELEKDMHYYQSCLEAILQN 177
+WD GGQD + + F+N + LI+V D RE ++ L+ +LQ
Sbjct: 62 CFTVWDVGGQDKIRPLW-----RHYFQNTQGLIFVVDSNDRERVQES---ADELQKMLQE 113
Query: 178 SP--DAKIFCLVHKMDL 192
DA + +K D+
Sbjct: 114 DELRDAVLLVFANKQDM 130
>gi|62751417 RAB, member of RAS oncogene family-like 3 [Homo
sapiens]
Length = 236
Score = 32.7 bits (73), Expect = 0.54
Identities = 30/134 (22%), Positives = 60/134 (44%), Gaps = 28/134 (20%)
Query: 42 KVLLMGKSGSGKTSMRSIIFANYI-ARDTRRLGATILDRIHSLQINSSLSTYSLVDSVGN 100
KVL++G SG GK+S+ ++ N + + +G ++ R+H + +
Sbjct: 8 KVLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVHDYK-----------EGTPE 56
Query: 101 TKTFDVEHSHVRFLGNLVLNLWDCGGQDTFMENYFTSQRDNIFRNVEVLIYVFDVESREL 160
KT+ +E LWD GG + S R + +V +I+V D+ +++
Sbjct: 57 EKTYYIE-------------LWDVGG-SVGSASSVKSTRAVFYNSVNGIIFVHDLTNKKS 102
Query: 161 EKDMHYYQSCLEAI 174
+++ + LEA+
Sbjct: 103 SQNLRRWS--LEAL 114
>gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Homo
sapiens]
Length = 1972
Score = 32.3 bits (72), Expect = 0.71
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 7/100 (7%)
Query: 137 SQRDNIFRNVEVLIYVFDVESRELEKDMHYYQSCLEAI---LQNSPDAKIFCLVHKMDLV 193
S +D++ +NV L + R LE M ++ LE + LQ + DAK+ V+ L
Sbjct: 1518 SSKDDVGKNVHEL----EKSKRALETQMEEMKTQLEELEDELQATEDAKLRLEVNMQALK 1573
Query: 194 QEDQRDLIFKEREEDLRRLSRPLECSCFRTSIWDETLYKA 233
+ +RDL ++ + + +R + + T + DE +A
Sbjct: 1574 GQFERDLQARDEQNEEKRRQLQRQLHEYETELEDERKQRA 1613
>gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Homo
sapiens]
Length = 1979
Score = 32.3 bits (72), Expect = 0.71
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 7/100 (7%)
Query: 137 SQRDNIFRNVEVLIYVFDVESRELEKDMHYYQSCLEAI---LQNSPDAKIFCLVHKMDLV 193
S +D++ +NV L + R LE M ++ LE + LQ + DAK+ V+ L
Sbjct: 1525 SSKDDVGKNVHEL----EKSKRALETQMEEMKTQLEELEDELQATEDAKLRLEVNMQALK 1580
Query: 194 QEDQRDLIFKEREEDLRRLSRPLECSCFRTSIWDETLYKA 233
+ +RDL ++ + + +R + + T + DE +A
Sbjct: 1581 GQFERDLQARDEQNEEKRRQLQRQLHEYETELEDERKQRA 1620
>gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Homo
sapiens]
Length = 1945
Score = 32.3 bits (72), Expect = 0.71
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 7/100 (7%)
Query: 137 SQRDNIFRNVEVLIYVFDVESRELEKDMHYYQSCLEAI---LQNSPDAKIFCLVHKMDLV 193
S +D++ +NV L + R LE M ++ LE + LQ + DAK+ V+ L
Sbjct: 1525 SSKDDVGKNVHEL----EKSKRALETQMEEMKTQLEELEDELQATEDAKLRLEVNMQALK 1580
Query: 194 QEDQRDLIFKEREEDLRRLSRPLECSCFRTSIWDETLYKA 233
+ +RDL ++ + + +R + + T + DE +A
Sbjct: 1581 GQFERDLQARDEQNEEKRRQLQRQLHEYETELEDERKQRA 1620
>gi|13124875 smooth muscle myosin heavy chain 11 isoform SM2A [Homo
sapiens]
Length = 1938
Score = 32.3 bits (72), Expect = 0.71
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 7/100 (7%)
Query: 137 SQRDNIFRNVEVLIYVFDVESRELEKDMHYYQSCLEAI---LQNSPDAKIFCLVHKMDLV 193
S +D++ +NV L + R LE M ++ LE + LQ + DAK+ V+ L
Sbjct: 1518 SSKDDVGKNVHEL----EKSKRALETQMEEMKTQLEELEDELQATEDAKLRLEVNMQALK 1573
Query: 194 QEDQRDLIFKEREEDLRRLSRPLECSCFRTSIWDETLYKA 233
+ +RDL ++ + + +R + + T + DE +A
Sbjct: 1574 GQFERDLQARDEQNEEKRRQLQRQLHEYETELEDERKQRA 1613
>gi|13376574 ADP-ribosylation factor-like 14 [Homo sapiens]
Length = 192
Score = 32.3 bits (72), Expect = 0.71
Identities = 37/166 (22%), Positives = 72/166 (43%), Gaps = 41/166 (24%)
Query: 28 GSLGWVLPNTAMKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATILDRIHSLQINS 87
GSLG P T + +VLL+G +GK+++ ++ L++
Sbjct: 2 GSLGSKNPQTK-QAQVLLLGLDSAGKSTL-----------------------LYKLKLAK 37
Query: 88 SLSTYSLVDSVGNTKTFDVEHSHVRFLGNLVLNLWDCGGQDTFMENYFTSQRDNIFRNVE 147
++T + ++G F+VE + NL L +WD GGQ+ + N +
Sbjct: 38 DITT---IPTIG----FNVEM--IELERNLSLTVWDVGGQEKMRTVW-----GCYCENTD 83
Query: 148 VLIYVFD-VESRELEKDMHYYQSCLEAILQNSPDAKIFCLVHKMDL 192
L+YV D + + LE+ ++ L+ ++ + + L +K D+
Sbjct: 84 GLVYVVDSTDKQRLEESQRQFEHILKN--EHIKNVPVVLLANKQDM 127
>gi|208609962 RAB7, member RAS oncogene family-like 1 isoform 1
[Homo sapiens]
Length = 203
Score = 32.3 bits (72), Expect = 0.71
Identities = 26/92 (28%), Positives = 38/92 (41%), Gaps = 11/92 (11%)
Query: 119 LNLWDCGGQDTFMENYFTSQRDNIFRNVEVLIYVFDVESRELEKDMHYYQSCLEA--ILQ 176
L LWD GQ+ FTS +R+ + +FDV + + ++ L++ L
Sbjct: 59 LQLWDIAGQER-----FTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLP 113
Query: 177 NSPDAKIFCLVHKMDL----VQEDQRDLIFKE 204
N L +K DL V DQ D KE
Sbjct: 114 NGEPVPCLLLANKCDLSPWAVSRDQIDRFSKE 145
>gi|4506375 RAB7, member RAS oncogene family-like 1 isoform 1 [Homo
sapiens]
Length = 203
Score = 32.3 bits (72), Expect = 0.71
Identities = 26/92 (28%), Positives = 38/92 (41%), Gaps = 11/92 (11%)
Query: 119 LNLWDCGGQDTFMENYFTSQRDNIFRNVEVLIYVFDVESRELEKDMHYYQSCLEA--ILQ 176
L LWD GQ+ FTS +R+ + +FDV + + ++ L++ L
Sbjct: 59 LQLWDIAGQER-----FTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLP 113
Query: 177 NSPDAKIFCLVHKMDL----VQEDQRDLIFKE 204
N L +K DL V DQ D KE
Sbjct: 114 NGEPVPCLLLANKCDLSPWAVSRDQIDRFSKE 145
>gi|4757774 ADP-ribosylation factor-like 3 [Homo sapiens]
Length = 182
Score = 32.3 bits (72), Expect = 0.71
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 5/41 (12%)
Query: 119 LNLWDCGGQDTFMENYFTSQRDNIFRNVEVLIYVFDVESRE 159
LN+WD GGQ + N F N ++LIYV D R+
Sbjct: 63 LNVWDIGGQRKIRPYW-----KNYFENTDILIYVIDSADRK 98
>gi|4758996 Ras-related protein Rab-33A [Homo sapiens]
Length = 237
Score = 32.3 bits (72), Expect = 0.71
Identities = 26/114 (22%), Positives = 49/114 (42%), Gaps = 32/114 (28%)
Query: 42 KVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATILDRIHSLQINSSLSTYSLVDSVGNT 101
K++++G S GKT + R G T D+ T + +
Sbjct: 38 KIIVIGDSNVGKTCLTF-----------RFCGGTFPDK-----------TEATIGVDFRE 75
Query: 102 KTFDVEHSHVRFLGNLVLNLWDCGGQDTFMENYFTSQRDNIFRNVEVLIYVFDV 155
KT ++E ++ + +WD GQ+ F + S ++ +RNV +++V+DV
Sbjct: 76 KTVEIEGEKIK------VQVWDTAGQERFRK----SMVEHYYRNVHAVVFVYDV 119
>gi|15718763 c-K-ras2 protein isoform a precursor [Homo sapiens]
Length = 189
Score = 32.0 bits (71), Expect = 0.93
Identities = 18/75 (24%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Query: 118 VLNLWDCGGQDTFMENYFTSQRDNIFRNVEVLIYVFDVESRELEKDMHYYQSCLEAILQN 177
+L++ D GQ+ + ++ RD R E + VF + + + +D+H+Y+ ++ + ++
Sbjct: 52 LLDILDTAGQEEY-----SAMRDQYMRTGEGFLCVFAINNTKSFEDIHHYREQIKRV-KD 105
Query: 178 SPDAKIFCLVHKMDL 192
S D + + +K DL
Sbjct: 106 SEDVPMVLVGNKCDL 120
>gi|15718761 c-K-ras2 protein isoform b precursor [Homo sapiens]
Length = 188
Score = 32.0 bits (71), Expect = 0.93
Identities = 18/75 (24%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Query: 118 VLNLWDCGGQDTFMENYFTSQRDNIFRNVEVLIYVFDVESRELEKDMHYYQSCLEAILQN 177
+L++ D GQ+ + ++ RD R E + VF + + + +D+H+Y+ ++ + ++
Sbjct: 52 LLDILDTAGQEEY-----SAMRDQYMRTGEGFLCVFAINNTKSFEDIHHYREQIKRV-KD 105
Query: 178 SPDAKIFCLVHKMDL 192
S D + + +K DL
Sbjct: 106 SEDVPMVLVGNKCDL 120
>gi|10880989 RAB18, member RAS oncogene family [Homo sapiens]
Length = 206
Score = 32.0 bits (71), Expect = 0.93
Identities = 34/131 (25%), Positives = 71/131 (54%), Gaps = 15/131 (11%)
Query: 42 KVLLMGKSGSGKTSMRSIIFANYIARDT--RRLGATI-LD-RIHSLQINSSLSTYSLVDS 97
K+L++G+SG GK+S+ + F + DT L ATI +D ++ ++ ++ + + ++ D+
Sbjct: 10 KILIIGESGVGKSSL-LLRFTD----DTFDPELAATIGVDFKVKTISVDGNKAKLAIWDT 64
Query: 98 VGNTKTFDVEHSHVRFLGNLVLNLWDCGGQDTF--MENYFTSQRDNIFRNVEVLIYV--- 152
G + + S+ R ++L ++D +DTF ++N+ RN V + V
Sbjct: 65 AGQERFRTLTPSYYRGAQGVIL-VYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNK 123
Query: 153 FDVESRELEKD 163
D E+RE++++
Sbjct: 124 IDKENREVDRN 134
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.134 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,366,467
Number of Sequences: 37866
Number of extensions: 549077
Number of successful extensions: 1777
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 49
Number of HSP's that attempted gapping in prelim test: 1750
Number of HSP's gapped (non-prelim): 67
length of query: 374
length of database: 18,247,518
effective HSP length: 104
effective length of query: 270
effective length of database: 14,309,454
effective search space: 3863552580
effective search space used: 3863552580
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.