Guide to the Human Genome
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Name: ARF4 Sequence: fasta or formatted (180aa) NCBI GI: 4502205
Description:

ADP-ribosylation factor 4

Referenced in:

ADP-Ribosylation Factors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0          9           2
 C cysteine            1.1          2           1
 D aspartate           6.1         11           1
 E glutamate           5.6         10           1
 F phenylalanine       3.9          7           1
 G glycine             7.2         13           2
 H histidine           0.6          1           1
 I isoleucine          6.1         11           1
 K lysine              6.1         11           2
 L leucine            13.9         25           3
 M methionine          3.3          6           1
 N asparagine          4.4          8           1
 P proline             1.7          3           1
 Q glutamine           5.6         10           1
 R arginine            5.6         10           1
 S serine              4.4          8           2
 T threonine           7.8         14           2
 V valine              6.7         12           2
 W tryptophan          2.2          4           1
 Y tyrosine            2.8          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ADP-ribosylation factor 4 
ARF5                  0.928   ADP-ribosylation factor 5 
ARF1                  0.821   ADP-ribosylation factor 1 
ARF1                  0.821   ADP-ribosylation factor 1 
ARF1                  0.821   ADP-ribosylation factor 1 
ARF1                  0.821   ADP-ribosylation factor 1 
ARF3                  0.806   ADP-ribosylation factor 3 
ARF6                  0.648   ADP-ribosylation factor 6 
ARL1                  0.561   ADP-ribosylation factor-like 1 
TRIM23                0.537   ADP-ribosylation factor domain protein 1 isoform alph...
TRIM23                0.460   ADP-ribosylation factor domain protein 1 isoform bet...
TRIM23                0.442   ADP-ribosylation factor domain protein 1 isoform gam...
ARL5A                 0.442   ADP-ribosylation factor-like 5A isoform 1 
ARL5B                 0.436   ADP-ribosylation factor-like 8 
ARL2                  0.421   ADP-ribosylation factor-like 2 
ARL14                 0.397   ADP-ribosylation factor-like 14 
ARL4A                 0.391   ADP-ribosylation factor-like 4A 
ARL4A                 0.391   ADP-ribosylation factor-like 4A 
ARL4A                 0.391   ADP-ribosylation factor-like 4A 
ARL4C                 0.382   ADP-ribosylation factor-like 4C 
ARL3                  0.376   ADP-ribosylation factor-like 3 
ARL5A                 0.343   ADP-ribosylation factor-like 5A isoform 2 
ARL5A                 0.343   ADP-ribosylation factor-like 5A isoform 2 
ARL5C                 0.340   ADP-ribosylation factor-like 5C 
ARL4D                 0.334   ADP-ribosylation factor-like 4D 
ARL6                  0.319   ADP-ribosylation factor-like 6 
ARL6                  0.319   ADP-ribosylation factor-like 6 
ARL11                 0.316   ADP-ribosylation factor-like 11 
ARL17                 0.296   ADP-ribosylation factor-like 17 isoform a 
ARL17P1               0.296   hypothetical protein LOC51326 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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