Guide to the Human Genome
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Name: RABL3 Sequence: fasta or formatted (236aa) NCBI GI: 62751417
Description:

RAB, member of RAS oncogene family-like 3

Referenced in:

Rab

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.7         11           2
 C cysteine            1.3          3           1
 D aspartate           6.8         16           1
 E glutamate           5.5         13           2
 F phenylalanine       4.2         10           2
 G glycine             7.6         18           2
 H histidine           2.5          6           1
 I isoleucine          3.8          9           2
 K lysine              5.9         14           2
 L leucine            10.6         25           2
 M methionine          0.4          1           1
 N asparagine          5.9         14           1
 P proline             3.4          8           1
 Q glutamine           3.4          8           1
 R arginine            5.9         14           2
 S serine              8.1         19           2
 T threonine           5.5         13           1
 V valine              9.7         23           1
 W tryptophan          1.3          3           1
 Y tyrosine            3.4          8           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   RAB, member of RAS oncogene family-like 3 
RAB35                 0.077   RAB35, member RAS oncogene family 
RASEF                 0.075   RAS and EF-hand domain containing 
RAB13                 0.073   RAB13, member RAS oncogene family 
EFCAB4B               0.071   EF-hand calcium binding domain 4B isoform a 
LOC100131294          0.071   PREDICTED: similar to RAB13, member RAS oncogene fa...
LOC100131294          0.071   PREDICTED: similar to hCG24991 
LOC100131294          0.071   PREDICTED: similar to hCG24991 
RAB1A                 0.068   RAB1A, member RAS oncogene family isoform 1 
RAB33B                0.068   RAB33B, member RAS oncogene family 
RAB1B                 0.066   RAB1B, member RAS oncogene family 
RAB27A                0.064   Ras-related protein Rab-27A 
RAB27A                0.064   Ras-related protein Rab-27A 
RAB27A                0.064   Ras-related protein Rab-27A 
RAB27A                0.064   Ras-related protein Rab-27A 
RAB8A                 0.064   mel transforming oncogene 
RAB36                 0.064   RAB36, member RAS oncogene family 
RAB39B                0.064   RAB39B, member RAS oncogene family 
RAB37                 0.064   RAB37, member RAS oncogene family isoform 3 
RAB8B                 0.064   RAB8B, member RAS oncogene family 
RAB7L1                0.064   RAB7, member RAS oncogene family-like 1 isoform 1 [...
RAB7L1                0.064   RAB7, member RAS oncogene family-like 1 isoform 1 [Ho...
RAB12                 0.064   RAB12, member RAS oncogene family 
RAB26                 0.064   RAB26, member RAS oncogene family 
RABL2A                0.062   RAB, member of RAS oncogene family-like 2A 
RABL2A                0.062   RAB, member of RAS oncogene family-like 2A 
RAB4B                 0.062   ras-related GTP-binding protein 4b 
RAB39                 0.062   RAB39, member RAS oncogene family 
RAB33A                0.060   Ras-related protein Rab-33A 
RAB14                 0.060   GTPase Rab14 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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