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Search of human proteins with 13236585
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|13236585 fibronectin type III and SPRY domain containing 1
[Homo sapiens]
(496 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|13236585 fibronectin type III and SPRY domain containing 1 [H... 992 0.0
gi|89886468 fibronectin type III and SPRY domain containing 1-li... 615 e-176
gi|223718222 fibronectin type III and SPRY domain containing 1-l... 612 e-175
gi|148833499 midline 1 [Homo sapiens] 210 2e-54
gi|4557753 midline 1 [Homo sapiens] 210 2e-54
gi|15451852 midline 1 [Homo sapiens] 210 2e-54
gi|223890259 midline 2 isoform 2 [Homo sapiens] 199 5e-51
gi|223890257 midline 2 isoform 1 [Homo sapiens] 191 1e-48
gi|47174859 tripartite motif-containing 46 [Homo sapiens] 117 2e-26
gi|13994289 fibronectin type III and SPRY domain containing 1-li... 112 6e-25
gi|62865606 tripartite motif-containing 36 isoform 1 [Homo sapiens] 101 1e-21
gi|134288906 tripartite motif-containing 67 [Homo sapiens] 97 3e-20
gi|190341104 tripartite motif protein 9 isoform 1 [Homo sapiens] 86 8e-17
gi|55741632 fibronectin type III and SPRY domain containing 2 [H... 79 9e-15
gi|62241003 cardiomyopathy associated 5 [Homo sapiens] 76 8e-14
gi|16519559 tripartite motif protein 9 isoform 2 [Homo sapiens] 76 8e-14
gi|46409324 SPRY domain containing 4 [Homo sapiens] 69 1e-11
gi|15208665 tripartite motif protein TRIM14 isoform alpha [Homo ... 65 1e-10
gi|15208663 tripartite motif protein TRIM14 isoform alpha [Homo ... 65 1e-10
gi|15208667 tripartite motif protein TRIM14 isoform alpha [Homo ... 65 1e-10
gi|19924163 muscle specific ring finger protein 1 [Homo sapiens] 65 2e-10
gi|68160937 tripartite motif-containing 25 [Homo sapiens] 63 7e-10
gi|38679905 tripartite motif-containing 65 [Homo sapiens] 56 7e-08
gi|63054855 erythroblast membrane-associated protein precursor [... 56 7e-08
gi|19923536 erythroblast membrane-associated protein precursor [... 56 7e-08
gi|78482626 ring finger protein 30 isoform 2 [Homo sapiens] 56 9e-08
gi|37655167 ring finger protein 135 isoform 1 [Homo sapiens] 55 2e-07
gi|22749269 ring finger protein 129 [Homo sapiens] 54 3e-07
gi|78482627 ring finger protein 30 isoform 1 [Homo sapiens] 54 3e-07
gi|217035095 tripartite motif-containing 62 [Homo sapiens] 53 6e-07
>gi|13236585 fibronectin type III and SPRY domain containing 1 [Homo
sapiens]
Length = 496
Score = 992 bits (2565), Expect = 0.0
Identities = 496/496 (100%), Positives = 496/496 (100%)
Query: 1 MEEQREALRKIIKTLAVKNEEIQSFIYSLKQMLLNVEANSAKVQEDLEAEFQSLFSLLEE 60
MEEQREALRKIIKTLAVKNEEIQSFIYSLKQMLLNVEANSAKVQEDLEAEFQSLFSLLEE
Sbjct: 1 MEEQREALRKIIKTLAVKNEEIQSFIYSLKQMLLNVEANSAKVQEDLEAEFQSLFSLLEE 60
Query: 61 LKEGMLMKIKQDRASRTYELQNQLAACTRALESSEELLETANQTLQAMDSEDFPQAAKQI 120
LKEGMLMKIKQDRASRTYELQNQLAACTRALESSEELLETANQTLQAMDSEDFPQAAKQI
Sbjct: 61 LKEGMLMKIKQDRASRTYELQNQLAACTRALESSEELLETANQTLQAMDSEDFPQAAKQI 120
Query: 121 KDGVTMAPAFRLSLKAKVSDNMSHLMVDFAQERQMLQALKFLPVPSAPVIDLAESLVADN 180
KDGVTMAPAFRLSLKAKVSDNMSHLMVDFAQERQMLQALKFLPVPSAPVIDLAESLVADN
Sbjct: 121 KDGVTMAPAFRLSLKAKVSDNMSHLMVDFAQERQMLQALKFLPVPSAPVIDLAESLVADN 180
Query: 181 CVTLVWRMPDEDSKIDHYVLEYRRTNFEGPPRLKEDQPWMVIEGIRQTEYTLTGLKFDMK 240
CVTLVWRMPDEDSKIDHYVLEYRRTNFEGPPRLKEDQPWMVIEGIRQTEYTLTGLKFDMK
Sbjct: 181 CVTLVWRMPDEDSKIDHYVLEYRRTNFEGPPRLKEDQPWMVIEGIRQTEYTLTGLKFDMK 240
Query: 241 YMNFRVKACNKAVAGEFSEPVTLETPAFMFRLDASTSHQNLRVDDLSVEWDAMGGKVQDI 300
YMNFRVKACNKAVAGEFSEPVTLETPAFMFRLDASTSHQNLRVDDLSVEWDAMGGKVQDI
Sbjct: 241 YMNFRVKACNKAVAGEFSEPVTLETPAFMFRLDASTSHQNLRVDDLSVEWDAMGGKVQDI 300
Query: 301 KAREKDGKGRTASPINSPARGTPSPKRMPSGRGGRDRFTAESYTVLGDTLIDGGEHYWEV 360
KAREKDGKGRTASPINSPARGTPSPKRMPSGRGGRDRFTAESYTVLGDTLIDGGEHYWEV
Sbjct: 301 KAREKDGKGRTASPINSPARGTPSPKRMPSGRGGRDRFTAESYTVLGDTLIDGGEHYWEV 360
Query: 361 RYEPDSKAFGVGVAYRSLGRFEQLGKTAASWCLHVNNWLQVSFTAKHANKVKVLDAPVPD 420
RYEPDSKAFGVGVAYRSLGRFEQLGKTAASWCLHVNNWLQVSFTAKHANKVKVLDAPVPD
Sbjct: 361 RYEPDSKAFGVGVAYRSLGRFEQLGKTAASWCLHVNNWLQVSFTAKHANKVKVLDAPVPD 420
Query: 421 CLGVHCDFHQGLLSFYNARTKQVLHTFKTRFTQPLLPAFTVWCGSFQVTTGLQVPSAVRC 480
CLGVHCDFHQGLLSFYNARTKQVLHTFKTRFTQPLLPAFTVWCGSFQVTTGLQVPSAVRC
Sbjct: 421 CLGVHCDFHQGLLSFYNARTKQVLHTFKTRFTQPLLPAFTVWCGSFQVTTGLQVPSAVRC 480
Query: 481 LQKRGSATSSSNTSLT 496
LQKRGSATSSSNTSLT
Sbjct: 481 LQKRGSATSSSNTSLT 496
>gi|89886468 fibronectin type III and SPRY domain containing 1-like
isoform 1 [Homo sapiens]
Length = 498
Score = 615 bits (1586), Expect = e-176
Identities = 300/495 (60%), Positives = 388/495 (78%), Gaps = 3/495 (0%)
Query: 1 MEEQREALRKIIKTLAVKNEEIQSFIYSLKQMLLNVEANSAKVQEDLEAEFQSLFSLLEE 60
M+ Q+EAL++II TLA KN+EIQ+FI +L L V+ NS+ + +L+ EF SL+S+L+E
Sbjct: 1 MDSQKEALQRIISTLANKNDEIQNFIDTLHHTLKGVQENSSNILSELDEEFDSLYSILDE 60
Query: 61 LKEGMLMKIKQDRASRTYELQNQLAACTRALESSEELLETANQTLQAMDSEDFPQAAKQI 120
+KE M+ IKQ++A ++ ELQ+Q++ C ALE+SEELLE A ++L + E+F +AA+QI
Sbjct: 61 VKESMINCIKQEQARKSQELQSQISQCNNALENSEELLEFATRSLDIKEPEEFSKAARQI 120
Query: 121 KDGVTMAPAFRLSLKAKVSDNMSHLMVDFAQERQMLQALKFLPVPSAPVIDLAESLVADN 180
KD VTMA AFRLSLK KVSDNM+HLMVDF+QERQMLQ LKFLPVP AP ID E LVADN
Sbjct: 121 KDRVTMASAFRLSLKPKVSDNMTHLMVDFSQERQMLQTLKFLPVPKAPEIDPVECLVADN 180
Query: 181 CVTLVWRMPDEDSKIDHYVLEYRRTNFEGPPRLKEDQPWMVIEGIRQTEYTLTGLKFDMK 240
VT+ WRMP+ED+KIDH++LE+R+TNF+G PR+K+++ W +I+ I+ TEYTL+GLKFD K
Sbjct: 181 SVTVAWRMPEEDNKIDHFILEHRKTNFDGLPRVKDERCWEIIDNIKGTEYTLSGLKFDSK 240
Query: 241 YMNFRVKACNKAVAGEFSEPVTLETPAFMFRLDASTSHQNLRVDDLSVEWDAMGGKVQDI 300
YMNFRV+ACNKAVAGE+S+PVTLET A F LD S+SH NL+V+D VEWD GGK Q+
Sbjct: 241 YMNFRVRACNKAVAGEYSDPVTLETKALNFNLDNSSSHLNLKVEDTCVEWDPTGGKGQES 300
Query: 301 KAREKDGKGRTASPINSPARGTPSPKRMPSGRGGRDRFTAESYTVLGDTLIDGGEHYWEV 360
K + K+ KGR+ +P SP R T R P+ RG RDRFT ESYTVLGDT I+ G+HYWEV
Sbjct: 301 KIKGKENKGRSGTP--SPKR-TSVGSRPPAVRGSRDRFTGESYTVLGDTAIESGQHYWEV 357
Query: 361 RYEPDSKAFGVGVAYRSLGRFEQLGKTAASWCLHVNNWLQVSFTAKHANKVKVLDAPVPD 420
+ + D K++ VGVAY++LG+F+QLGKT SWC+HVNNWLQ +F AKH NKVK LD VP+
Sbjct: 358 KAQKDCKSYSVGVAYKTLGKFDQLGKTNTSWCIHVNNWLQNTFAAKHNNKVKALDVTVPE 417
Query: 421 CLGVHCDFHQGLLSFYNARTKQVLHTFKTRFTQPLLPAFTVWCGSFQVTTGLQVPSAVRC 480
+GV CDF G LSFY+A +KQ+L++FKT+FTQP+LP F VWCG ++TG+QVPSAVR
Sbjct: 418 KIGVFCDFDGGQLSFYDANSKQLLYSFKTKFTQPVLPGFMVWCGGLSLSTGMQVPSAVRT 477
Query: 481 LQKRGSATSSSNTSL 495
LQK + + S +SL
Sbjct: 478 LQKSENGMTGSASSL 492
>gi|223718222 fibronectin type III and SPRY domain containing 1-like
isoform 3 [Homo sapiens]
Length = 530
Score = 612 bits (1578), Expect = e-175
Identities = 299/492 (60%), Positives = 386/492 (78%), Gaps = 3/492 (0%)
Query: 4 QREALRKIIKTLAVKNEEIQSFIYSLKQMLLNVEANSAKVQEDLEAEFQSLFSLLEELKE 63
Q+EAL++II TLA KN+EIQ+FI +L L V+ NS+ + +L+ EF SL+S+L+E+KE
Sbjct: 36 QQEALQRIISTLANKNDEIQNFIDTLHHTLKGVQENSSNILSELDEEFDSLYSILDEVKE 95
Query: 64 GMLMKIKQDRASRTYELQNQLAACTRALESSEELLETANQTLQAMDSEDFPQAAKQIKDG 123
M+ IKQ++A ++ ELQ+Q++ C ALE+SEELLE A ++L + E+F +AA+QIKD
Sbjct: 96 SMINCIKQEQARKSQELQSQISQCNNALENSEELLEFATRSLDIKEPEEFSKAARQIKDR 155
Query: 124 VTMAPAFRLSLKAKVSDNMSHLMVDFAQERQMLQALKFLPVPSAPVIDLAESLVADNCVT 183
VTMA AFRLSLK KVSDNM+HLMVDF+QERQMLQ LKFLPVP AP ID E LVADN VT
Sbjct: 156 VTMASAFRLSLKPKVSDNMTHLMVDFSQERQMLQTLKFLPVPKAPEIDPVECLVADNSVT 215
Query: 184 LVWRMPDEDSKIDHYVLEYRRTNFEGPPRLKEDQPWMVIEGIRQTEYTLTGLKFDMKYMN 243
+ WRMP+ED+KIDH++LE+R+TNF+G PR+K+++ W +I+ I+ TEYTL+GLKFD KYMN
Sbjct: 216 VAWRMPEEDNKIDHFILEHRKTNFDGLPRVKDERCWEIIDNIKGTEYTLSGLKFDSKYMN 275
Query: 244 FRVKACNKAVAGEFSEPVTLETPAFMFRLDASTSHQNLRVDDLSVEWDAMGGKVQDIKAR 303
FRV+ACNKAVAGE+S+PVTLET A F LD S+SH NL+V+D VEWD GGK Q+ K +
Sbjct: 276 FRVRACNKAVAGEYSDPVTLETKALNFNLDNSSSHLNLKVEDTCVEWDPTGGKGQESKIK 335
Query: 304 EKDGKGRTASPINSPARGTPSPKRMPSGRGGRDRFTAESYTVLGDTLIDGGEHYWEVRYE 363
K+ KGR+ +P SP R T R P+ RG RDRFT ESYTVLGDT I+ G+HYWEV+ +
Sbjct: 336 GKENKGRSGTP--SPKR-TSVGSRPPAVRGSRDRFTGESYTVLGDTAIESGQHYWEVKAQ 392
Query: 364 PDSKAFGVGVAYRSLGRFEQLGKTAASWCLHVNNWLQVSFTAKHANKVKVLDAPVPDCLG 423
D K++ VGVAY++LG+F+QLGKT SWC+HVNNWLQ +F AKH NKVK LD VP+ +G
Sbjct: 393 KDCKSYSVGVAYKTLGKFDQLGKTNTSWCIHVNNWLQNTFAAKHNNKVKALDVTVPEKIG 452
Query: 424 VHCDFHQGLLSFYNARTKQVLHTFKTRFTQPLLPAFTVWCGSFQVTTGLQVPSAVRCLQK 483
V CDF G LSFY+A +KQ+L++FKT+FTQP+LP F VWCG ++TG+QVPSAVR LQK
Sbjct: 453 VFCDFDGGQLSFYDANSKQLLYSFKTKFTQPVLPGFMVWCGGLSLSTGMQVPSAVRTLQK 512
Query: 484 RGSATSSSNTSL 495
+ + S +SL
Sbjct: 513 SENGMTGSASSL 524
>gi|148833499 midline 1 [Homo sapiens]
Length = 667
Score = 210 bits (535), Expect = 2e-54
Identities = 146/493 (29%), Positives = 244/493 (49%), Gaps = 55/493 (11%)
Query: 2 EEQREALRKIIKTLAVKNEEIQSFIYSLKQMLLNVEANSAKVQEDLEAEFQSLFSLLEEL 61
++ ++ L + L +N E+++ + L Q +VE N+++ + L E L ++++
Sbjct: 217 DKLKQNLESNLTNLIKRNTELETLLAKLIQTCQHVEVNASRQEAKLTEECDLLIEIIQQR 276
Query: 62 KEGMLMKIKQDRASRTYELQNQLAACTRALESSEELLETANQTLQAMDSEDFPQAAKQIK 121
++ + KIK+ + R +L Q+A C + +E S L+ A +L+ D F Q AK I
Sbjct: 277 RQIIGTKIKEGKVMRLRKLAQQIANCKQCIERSASLISQAEHSLKENDHARFLQTAKNIT 336
Query: 122 DGVTMAPAFRLSL--KAKVSDNMSHLMVDFAQERQMLQALKFLPVPSAPVIDLAESLVAD 179
+ V+MA A L + ++D +DF++E+++L+ L +L P+ P I +
Sbjct: 337 ERVSMATASSQVLIPEINLNDTFDTFALDFSREKKLLECLDYLTAPNPPTIREELCTASY 396
Query: 180 NCVTLVWRMPDEDSKIDHYVLEYRRTNFEGPPRL----KEDQPWMVIEGIRQTEYTLTGL 235
+ +T+ W DE S + Y L+Y T F G + WM++ I+Q YT+ GL
Sbjct: 397 DTITVHWTSDDEFSVVS-YELQY--TIFTGQANVVSLCNSADSWMIVPNIKQNHYTVHGL 453
Query: 236 KFDMKYMNFRVKACNKAVAGEFSEPVTLETPAFMFRLDASTSHQNLRV--DDLSVEWDAM 293
+ KY+ F VKA N+A SEP L+T + F+LD ++H+ L+V D+L+VE D
Sbjct: 454 QSGTKYI-FMVKAINQA-GSRSSEPGKLKTNSQPFKLDPKSAHRKLKVSHDNLTVERDES 511
Query: 294 GGKVQDIKAREKDGKGRTASPINSPARGTPSPKRMPSGRGGRDRFTAE-SYTVLGDTLID 352
K K T +RFT++ SY V G+ ID
Sbjct: 512 SSK-----------KSHTP-----------------------ERFTSQGSYGVAGNVFID 537
Query: 353 GGEHYWEVRYEPDSKAFGVGVAYRSLGRFEQLGKTAASW--CLHVNNWLQVSFTAKHANK 410
G HYWEV S + +G+AY+S + E +GK +ASW C NNW+ ++ +
Sbjct: 538 SGRHYWEVVIS-GSTWYAIGLAYKSAPKHEWIGKNSASWALCRCNNNWV----VRHNSKE 592
Query: 411 VKVLDAPVPDCLGVHCDFHQGLLSFYNARTKQVLHTFKTRFTQPLLPAFTVWCGSFQVTT 470
+ + AP +G+ D+ G ++FY+A L+TF F QP+ P FTVW + T
Sbjct: 593 IPIEPAPHLRRVGILLDYDNGSIAFYDALNSIHLYTFDVAFAQPVCPTFTVWNKCLTIIT 652
Query: 471 GLQVPSAVRCLQK 483
GL +P + C ++
Sbjct: 653 GLPIPDHLDCTEQ 665
>gi|4557753 midline 1 [Homo sapiens]
Length = 667
Score = 210 bits (535), Expect = 2e-54
Identities = 146/493 (29%), Positives = 244/493 (49%), Gaps = 55/493 (11%)
Query: 2 EEQREALRKIIKTLAVKNEEIQSFIYSLKQMLLNVEANSAKVQEDLEAEFQSLFSLLEEL 61
++ ++ L + L +N E+++ + L Q +VE N+++ + L E L ++++
Sbjct: 217 DKLKQNLESNLTNLIKRNTELETLLAKLIQTCQHVEVNASRQEAKLTEECDLLIEIIQQR 276
Query: 62 KEGMLMKIKQDRASRTYELQNQLAACTRALESSEELLETANQTLQAMDSEDFPQAAKQIK 121
++ + KIK+ + R +L Q+A C + +E S L+ A +L+ D F Q AK I
Sbjct: 277 RQIIGTKIKEGKVMRLRKLAQQIANCKQCIERSASLISQAEHSLKENDHARFLQTAKNIT 336
Query: 122 DGVTMAPAFRLSL--KAKVSDNMSHLMVDFAQERQMLQALKFLPVPSAPVIDLAESLVAD 179
+ V+MA A L + ++D +DF++E+++L+ L +L P+ P I +
Sbjct: 337 ERVSMATASSQVLIPEINLNDTFDTFALDFSREKKLLECLDYLTAPNPPTIREELCTASY 396
Query: 180 NCVTLVWRMPDEDSKIDHYVLEYRRTNFEGPPRL----KEDQPWMVIEGIRQTEYTLTGL 235
+ +T+ W DE S + Y L+Y T F G + WM++ I+Q YT+ GL
Sbjct: 397 DTITVHWTSDDEFSVVS-YELQY--TIFTGQANVVSLCNSADSWMIVPNIKQNHYTVHGL 453
Query: 236 KFDMKYMNFRVKACNKAVAGEFSEPVTLETPAFMFRLDASTSHQNLRV--DDLSVEWDAM 293
+ KY+ F VKA N+A SEP L+T + F+LD ++H+ L+V D+L+VE D
Sbjct: 454 QSGTKYI-FMVKAINQA-GSRSSEPGKLKTNSQPFKLDPKSAHRKLKVSHDNLTVERDES 511
Query: 294 GGKVQDIKAREKDGKGRTASPINSPARGTPSPKRMPSGRGGRDRFTAE-SYTVLGDTLID 352
K K T +RFT++ SY V G+ ID
Sbjct: 512 SSK-----------KSHTP-----------------------ERFTSQGSYGVAGNVFID 537
Query: 353 GGEHYWEVRYEPDSKAFGVGVAYRSLGRFEQLGKTAASW--CLHVNNWLQVSFTAKHANK 410
G HYWEV S + +G+AY+S + E +GK +ASW C NNW+ ++ +
Sbjct: 538 SGRHYWEVVIS-GSTWYAIGLAYKSAPKHEWIGKNSASWALCRCNNNWV----VRHNSKE 592
Query: 411 VKVLDAPVPDCLGVHCDFHQGLLSFYNARTKQVLHTFKTRFTQPLLPAFTVWCGSFQVTT 470
+ + AP +G+ D+ G ++FY+A L+TF F QP+ P FTVW + T
Sbjct: 593 IPIEPAPHLRRVGILLDYDNGSIAFYDALNSIHLYTFDVAFAQPVCPTFTVWNKCLTIIT 652
Query: 471 GLQVPSAVRCLQK 483
GL +P + C ++
Sbjct: 653 GLPIPDHLDCTEQ 665
>gi|15451852 midline 1 [Homo sapiens]
Length = 667
Score = 210 bits (535), Expect = 2e-54
Identities = 146/493 (29%), Positives = 244/493 (49%), Gaps = 55/493 (11%)
Query: 2 EEQREALRKIIKTLAVKNEEIQSFIYSLKQMLLNVEANSAKVQEDLEAEFQSLFSLLEEL 61
++ ++ L + L +N E+++ + L Q +VE N+++ + L E L ++++
Sbjct: 217 DKLKQNLESNLTNLIKRNTELETLLAKLIQTCQHVEVNASRQEAKLTEECDLLIEIIQQR 276
Query: 62 KEGMLMKIKQDRASRTYELQNQLAACTRALESSEELLETANQTLQAMDSEDFPQAAKQIK 121
++ + KIK+ + R +L Q+A C + +E S L+ A +L+ D F Q AK I
Sbjct: 277 RQIIGTKIKEGKVMRLRKLAQQIANCKQCIERSASLISQAEHSLKENDHARFLQTAKNIT 336
Query: 122 DGVTMAPAFRLSL--KAKVSDNMSHLMVDFAQERQMLQALKFLPVPSAPVIDLAESLVAD 179
+ V+MA A L + ++D +DF++E+++L+ L +L P+ P I +
Sbjct: 337 ERVSMATASSQVLIPEINLNDTFDTFALDFSREKKLLECLDYLTAPNPPTIREELCTASY 396
Query: 180 NCVTLVWRMPDEDSKIDHYVLEYRRTNFEGPPRL----KEDQPWMVIEGIRQTEYTLTGL 235
+ +T+ W DE S + Y L+Y T F G + WM++ I+Q YT+ GL
Sbjct: 397 DTITVHWTSDDEFSVVS-YELQY--TIFTGQANVVSLCNSADSWMIVPNIKQNHYTVHGL 453
Query: 236 KFDMKYMNFRVKACNKAVAGEFSEPVTLETPAFMFRLDASTSHQNLRV--DDLSVEWDAM 293
+ KY+ F VKA N+A SEP L+T + F+LD ++H+ L+V D+L+VE D
Sbjct: 454 QSGTKYI-FMVKAINQA-GSRSSEPGKLKTNSQPFKLDPKSAHRKLKVSHDNLTVERDES 511
Query: 294 GGKVQDIKAREKDGKGRTASPINSPARGTPSPKRMPSGRGGRDRFTAE-SYTVLGDTLID 352
K K T +RFT++ SY V G+ ID
Sbjct: 512 SSK-----------KSHTP-----------------------ERFTSQGSYGVAGNVFID 537
Query: 353 GGEHYWEVRYEPDSKAFGVGVAYRSLGRFEQLGKTAASW--CLHVNNWLQVSFTAKHANK 410
G HYWEV S + +G+AY+S + E +GK +ASW C NNW+ ++ +
Sbjct: 538 SGRHYWEVVIS-GSTWYAIGLAYKSAPKHEWIGKNSASWALCRCNNNWV----VRHNSKE 592
Query: 411 VKVLDAPVPDCLGVHCDFHQGLLSFYNARTKQVLHTFKTRFTQPLLPAFTVWCGSFQVTT 470
+ + AP +G+ D+ G ++FY+A L+TF F QP+ P FTVW + T
Sbjct: 593 IPIEPAPHLRRVGILLDYDNGSIAFYDALNSIHLYTFDVAFAQPVCPTFTVWNKCLTIIT 652
Query: 471 GLQVPSAVRCLQK 483
GL +P + C ++
Sbjct: 653 GLPIPDHLDCTEQ 665
>gi|223890259 midline 2 isoform 2 [Homo sapiens]
Length = 705
Score = 199 bits (506), Expect = 5e-51
Identities = 144/484 (29%), Positives = 234/484 (48%), Gaps = 47/484 (9%)
Query: 2 EEQREALRKIIKTLAVKNEEIQSFIYSLKQMLLNVEANSAKVQEDLEAEFQSLFSLLEEL 61
E+ ++ L + L +N E+++ + L Q+ VE N+A + L E L ++++
Sbjct: 237 EKLKQTLEMNLTNLVKRNSELENQMAKLIQICQQVEVNTAMHEAKLMEECDELVEIIQQR 296
Query: 62 KEGMLMKIKQDRASRTYELQNQLAACTRALESSEELLETANQTLQAMDSEDFPQAAKQIK 121
K+ + +KIK+ + + +L Q+A C + LE S L+ A L+ D F Q+AK I
Sbjct: 297 KQMIAVKIKETKVMKLRKLAQQVANCRQCLERSTVLINQAEHILKENDQARFLQSAKNIA 356
Query: 122 DGVTMAPAFRLSLKAKV--SDNMSHLMVDFAQERQMLQALKFLPVPSAPVIDLAESLVAD 179
+ V MA A L + +D + +DF++E+++L+ L +L P+ P I +
Sbjct: 357 ERVAMATASSQVLIPDINFNDAFENFALDFSREKKLLEGLDYLTAPNPPSIREELCTASH 416
Query: 180 NCVTLVWRMPDEDSKIDHYVLEYRRTNFEGPPRL----KEDQPWMVIEGIRQTEYTLTGL 235
+ +T+ W + D++ I Y L+Y T F G WM++ I+Q YT+ GL
Sbjct: 417 DTITVHW-ISDDEFSISSYELQY--TIFTGQANFISLYNSVDSWMIVPNIKQNHYTVHGL 473
Query: 236 KFDMKYMNFRVKACNKAVAGEFSEPVTLETPAFMFRLDASTSHQNLRVDDLSVEWDAMGG 295
+ +Y+ F VKA N+A SEP L+T + F+LD +H+ L++ +
Sbjct: 474 QSGTRYI-FIVKAINQA-GSRNSEPTRLKTNSQPFKLDPKMTHKKLKISN---------- 521
Query: 296 KVQDIKAREKDGKGRTASPINSPARGTPSPKRMPSGRGGRDRFTAESYTVLGDTLIDGGE 355
D EKD S + + +P+R SG G Y G+ ID G
Sbjct: 522 ---DGLQMEKD---------ESSLKKSHTPERF-SGTG--------CYGAAGNIFIDSGC 560
Query: 356 HYWEVRYEPDSKAFGVGVAYRSLGRFEQLGKTAASWCLHVNNWLQVSFTAKHANKVKVLD 415
HYWEV S + +G+AY+S + E +GK A+SW V + +F +H NK ++D
Sbjct: 561 HYWEV-VMGSSTWYAIGIAYKSAPKNEWIGKNASSW---VFSRCNSNFVVRHNNKEMLVD 616
Query: 416 APVP-DCLGVHCDFHQGLLSFYNARTKQVLHTFKTRFTQPLLPAFTVWCGSFQVTTGLQV 474
P LGV D+ +LSFY+ LHTF F P+ P FT+W S + +GL
Sbjct: 617 VPPHLKRLGVLLDYDNNMLSFYDPANSLHLHTFDVTFILPVCPTFTIWNKSLMILSGLPA 676
Query: 475 PSAV 478
P +
Sbjct: 677 PDFI 680
>gi|223890257 midline 2 isoform 1 [Homo sapiens]
Length = 735
Score = 191 bits (485), Expect = 1e-48
Identities = 145/512 (28%), Positives = 237/512 (46%), Gaps = 73/512 (14%)
Query: 2 EEQREALRKIIKTLAVKNEEIQSFIYSLKQMLLNVEANSAKVQEDLEAEFQSLFSLLEEL 61
E+ ++ L + L +N E+++ + L Q+ VE N+A + L E L ++++
Sbjct: 237 EKLKQTLEMNLTNLVKRNSELENQMAKLIQICQQVEVNTAMHEAKLMEECDELVEIIQQR 296
Query: 62 KEGMLMKIKQDRASRTYELQNQLAACTRALESSEELLETANQTLQAMDSEDFPQAAKQIK 121
K+ + +KIK+ + + +L Q+A C + LE S L+ A L+ D F Q+AK I
Sbjct: 297 KQMIAVKIKETKVMKLRKLAQQVANCRQCLERSTVLINQAEHILKENDQARFLQSAKNIA 356
Query: 122 DGVTMAPAFRLSLKAKVS--DNMSHLMVDFAQERQMLQALKFLPVPSAPVIDLAESLVAD 179
+ V MA A L ++ D + +DF++E+++L+ L +L P+ P I +
Sbjct: 357 ERVAMATASSQVLIPDINFNDAFENFALDFSREKKLLEGLDYLTAPNPPSIREELCTASH 416
Query: 180 NCVTLVWRMPDEDSKIDHYVLEYR----RTNF--------------------------EG 209
+ +T+ W + D++ I Y L+Y + NF G
Sbjct: 417 DTITVHW-ISDDEFSISSYELQYTIFTGQANFISKSWCSWGLWPEIRKCKEAVSCSRLAG 475
Query: 210 PPR--LKEDQPWMVIEGIRQTEYTLTGLKFDMKYMNFRVKACNKAVAGEFSEPVTLETPA 267
PR WM++ I+Q YT+ GL+ +Y+ F VKA N+A SEP L+T +
Sbjct: 476 APRGLYNSVDSWMIVPNIKQNHYTVHGLQSGTRYI-FIVKAINQA-GSRNSEPTRLKTNS 533
Query: 268 FMFRLDASTSHQNLRVDDLSVEWDAMGGKVQDIKAREKDGKGRTASPINSPARGTPSPKR 327
F+LD +H+ L++ + ++ EKD S + + +P+R
Sbjct: 534 QPFKLDPKMTHKKLKISNDGLQM-------------EKD---------ESSLKKSHTPER 571
Query: 328 MPSGRGGRDRFTAESYTVLGDTLIDGGEHYWEVRYEPDSKAFGVGVAYRSLGRFEQLGKT 387
SG G Y G+ ID G HYWEV S + +G+AY+S + E +GK
Sbjct: 572 F-SGTG--------CYGAAGNIFIDSGCHYWEV-VMGSSTWYAIGIAYKSAPKNEWIGKN 621
Query: 388 AASWCLHVNNWLQVSFTAKHANKVKVLDAPVP-DCLGVHCDFHQGLLSFYNARTKQVLHT 446
A+SW N +F +H NK ++D P LGV D+ +LSFY+ LHT
Sbjct: 622 ASSWVFSRCN---SNFVVRHNNKEMLVDVPPHLKRLGVLLDYDNNMLSFYDPANSLHLHT 678
Query: 447 FKTRFTQPLLPAFTVWCGSFQVTTGLQVPSAV 478
F F P+ P FT+W S + +GL P +
Sbjct: 679 FDVTFILPVCPTFTIWNKSLMILSGLPAPDFI 710
>gi|47174859 tripartite motif-containing 46 [Homo sapiens]
Length = 759
Score = 117 bits (293), Expect = 2e-26
Identities = 102/376 (27%), Positives = 161/376 (42%), Gaps = 36/376 (9%)
Query: 5 REALRKIIKTLAVKNEEIQSFIYSLKQMLLNVEANSAKVQEDLEAEFQSLFSLLEELKEG 64
++ L K + + + +Q+ I L++ + + E + + +E++ + L ++LEE +
Sbjct: 271 KDKLTKSLTYILGNQDTVQTQICELEEAVRHTEVSGQQAKEEVSQLVRGLGAVLEEKRAS 330
Query: 65 MLMKIKQDRASRTYELQNQLAACTRALESSEELLETANQTLQAMDSEDFPQAAKQIKDGV 124
+L I++ + R L Q+ R+L L+ A + L+ D F QAAKQ+ + +
Sbjct: 331 LLQAIEECQQERLARLSAQIQE-HRSLLDGSGLVGYAQEVLKETDQPCFVQAAKQLHNRI 389
Query: 125 TMAPAFRLSLKAKVSDNMSHLMVDFAQERQMLQALKFLPVPSAPVIDLAESLVADNCVTL 184
A + + S + H +D +E ++L L FL VP APVID + D + L
Sbjct: 390 ARATEALQTFRPAASSSFRHCQLDVGREMKLLTELNFLRVPEAPVIDTQRTFAYDQ-IFL 448
Query: 185 VWRMPDEDSKIDHYVLEYRRTNFEGPPRLKEDQPWMVIEGIRQTEYTLTGLKFDMKYMNF 244
WR+P HY +E+RRT+ P W E +R T L Y+
Sbjct: 449 CWRLPPHSPPAWHYTVEFRRTDVPAQP---GPTRWQRREEVRGTSALLENPDTGSVYV-L 504
Query: 245 RVKACNKAVAGEFSEPVTLETPAFMFRLDASTSHQNLRVDDLSVEWDAMGGKVQDIKARE 304
RV+ CNKA GE+SE V L TP A H L D+ G ++ A
Sbjct: 505 RVRGCNKAGYGEYSEDVHLHTP------PAPVLHFFL---------DSRWGASRERLAIS 549
Query: 305 KDGKGRTASPINSPARGTP---SPKRMPSGRGGRDRFTAESYTVLGDTLIDGGEHYWEVR 361
KD + + P G P + R+ +G VLGD + G YW
Sbjct: 550 KDQRAVRSVP------GLPLLLAADRLLTG------CHLSVDVVLGDVAVTQGRSYWACA 597
Query: 362 YEPDSKAFGVGVAYRS 377
+P S VGV S
Sbjct: 598 VDPASYLVKVGVGLES 613
>gi|13994289 fibronectin type III and SPRY domain containing 1-like
isoform 2 [Homo sapiens]
Length = 145
Score = 112 bits (281), Expect = 6e-25
Identities = 56/118 (47%), Positives = 86/118 (72%)
Query: 1 MEEQREALRKIIKTLAVKNEEIQSFIYSLKQMLLNVEANSAKVQEDLEAEFQSLFSLLEE 60
M+ Q+EAL++II TLA KN+EIQ+FI +L L V+ NS+ + +L+ EF SL+S+L+E
Sbjct: 1 MDSQKEALQRIISTLANKNDEIQNFIDTLHHTLKGVQENSSNILSELDEEFDSLYSILDE 60
Query: 61 LKEGMLMKIKQDRASRTYELQNQLAACTRALESSEELLETANQTLQAMDSEDFPQAAK 118
+KE M+ IKQ++A ++ ELQ+Q++ C ALE+SEELLE A ++L + E+F + K
Sbjct: 61 VKESMINCIKQEQARKSQELQSQISQCNNALENSEELLEFATRSLDIKEPEEFSKVHK 118
>gi|62865606 tripartite motif-containing 36 isoform 1 [Homo sapiens]
Length = 728
Score = 101 bits (252), Expect = 1e-21
Identities = 120/487 (24%), Positives = 201/487 (41%), Gaps = 68/487 (13%)
Query: 5 REALRKIIKTLAVKNEEIQSFIYSLKQMLLNVEANSAKVQEDLEAEFQSLFSLLEELKEG 64
+E L K I L K +++S I L ++ E N + +E+ F+ LF +LEE K
Sbjct: 257 KEKLSKDIDYLIGKESQVKSQISELNLLMKETECNGERAKEEAITHFEKLFEVLEERKSS 316
Query: 65 MLMKIKQDRASRTYELQNQLAACTRALESSEELLETANQTLQAMDSEDFPQAAKQIKDGV 124
+L I + R + Q Q+ LE++ L+ A + L+ D F Q AKQ+ +
Sbjct: 317 VLKAIDSSKKLRLDKFQTQMEEYQGLLENN-GLVGYAQEVLKETDQSCFVQTAKQLHLRI 375
Query: 125 TMAPAFRLSLKAKVSDNMSHLMVDFAQERQMLQALKFLPVP-SAPVIDLAESLVADNCVT 183
A S + + +V+ +++ ++L L F P I+ +S V +N +
Sbjct: 376 QKATESLKSFRPAAQTSFEDYVVNTSKQTELLGELSFFSSGIDVPEINEEQSKVYNNAL- 434
Query: 184 LVWRMPDEDSKIDHYVLEYRRTNFEGPPRLKEDQPWMVIEGIRQTEYTLTGLKFDMKYMN 243
+ W P++D K D YVLEYR+ N + ++ W IE + T + L+ Y
Sbjct: 435 INWHHPEKD-KADSYVLEYRKINRD------DEMSWNEIE-VCGTSKIIQDLENSSTYA- 485
Query: 244 FRVKACNKAVAGEFSEPVTLET---PAFMFRLDASTSHQNLRVDDLSVEWDAMGGKVQDI 300
FRV+A ++ S + L T P F F D + N + +
Sbjct: 486 FRVRAYKGSICSPCSRELILHTPPAPVFSFLFDEKCGYNN-----------------EHL 528
Query: 301 KAREKDGKGRTASPINSPARGTPSPKRMPSGRGGRDRFTAESYTVLGDTLIDGGEHYWEV 360
K + + + N + +R+ G +T+ Y ++GDT I G+H+W
Sbjct: 529 LLNLKRDRVESRAGFNL----LLAAERIQVG-----YYTSLDY-IIGDTGITKGKHFWAF 578
Query: 361 RYEPDSKAFGVGVAYRS-------------LGRFEQ-LGKTAAS--WCLH-------VNN 397
R EP S VGVA R+EQ G + S C V
Sbjct: 579 RVEPYSYLVKVGVASSDKLQEWLRSPRDAVSPRYEQDSGHDSGSEDACFDSSQPFTLVTI 638
Query: 398 WLQVSFTAK---HANKVKVLDAPVPDCLGVHCDFHQGLLSFYNARTKQVLHTFKTRFTQP 454
+Q F K +N+ + P+P +G+ D +G + FY+ + L+ + +
Sbjct: 639 GMQKFFIPKSPTSSNEPENRVLPMPTSIGIFLDCDKGKVDFYDMDQMKCLYERQVDCSHT 698
Query: 455 LLPAFTV 461
L PAF +
Sbjct: 699 LYPAFAL 705
>gi|134288906 tripartite motif-containing 67 [Homo sapiens]
Length = 783
Score = 97.1 bits (240), Expect = 3e-20
Identities = 121/491 (24%), Positives = 208/491 (42%), Gaps = 78/491 (15%)
Query: 2 EEQREALRKIIKTLAVKNEEIQSFIYSLKQMLLNVEANSAKVQEDLEAEFQSLFSLLEEL 61
++ + L + + ++ K +E + F+ LK +L ++ N + L A+ +L L
Sbjct: 345 KQHKAQLSQALNGVSDKAKEAKEFLVQLKNILQQIQENGLDYEACLVAQCDALVDALTRQ 404
Query: 62 KEGMLMKIKQDRASRTYELQNQLAACTRALESSEELLETANQTLQAMDSEDFPQAAKQI- 120
K +L K+ ++R + + +Q+ CT L S L+E + ++ D F Q + +
Sbjct: 405 KAKLLTKVTKEREHKLKMVWDQINHCTLKLRQSTGLMEYCLEVIKENDPSGFLQISDALI 464
Query: 121 -KDGVTMAPAFRLSLKAKVSDNMSHLMVDFAQERQMLQALKFLP----VPSAPVIDLAES 175
+ V+ + +L+ KVS L +D Q + L F+ VP P++ L +
Sbjct: 465 KRVQVSQEQWVKGALEPKVSAEFD-LTLDSEPLLQAIHQLDFIQMKCRVPPVPLLQLEKC 523
Query: 176 LVADNCVTLVWRMPD-EDSKIDHYVLEYRRTNFEGPPRLKEDQPWMVIEGIRQTEYTLTG 234
+N VTL WRMP S +D Y+LE + + +E V G ++T T+ G
Sbjct: 524 CTRNNSVTLAWRMPPFTHSPVDGYILE---LDDGAGGQFRE-----VYVG-KETLCTIDG 574
Query: 235 LKFDMKYMNFRVKACNKAVAGEFSEPVTLET-PAFMFRLDASTSHQNLRVDDLSVEWDAM 293
L F+ Y N RVKA N + G +S+ V L+T F D ++ H+++ + +
Sbjct: 575 LHFNSTY-NARVKAFNSSGVGPYSKTVVLQTSDVAWFTFDPNSGHRDIILSN-------- 625
Query: 294 GGKVQDIKAREKDGKGRTASPINSPARGTPSPKRMPSGRGGRDRFTAESYTVLGDTLIDG 353
D + T S + + VLG
Sbjct: 626 ------------DNQTATCS-------------------------SYDDRVVLGTAAFSK 648
Query: 354 GEHYWEV---RYE--PDSKAFGVGVAYRSLGRFEQLGKTAASWCLHV-NNWLQVSFTAKH 407
G HYWE+ RY+ PD GVA S+ + LGK +W ++V NN H
Sbjct: 649 GVHYWELHVDRYDNHPDP---AFGVARASVVKDMMLGKDDKAWAMYVDNNRSWFMHCNSH 705
Query: 408 ANKVKVLDAPVPDCLGVHCDFHQGLLSFYNARTKQVLHTFKTRFTQPLLPAFTVWCGSFQ 467
N+ + +GV D ++ L+F+ +Q F + +PA ++ + Q
Sbjct: 706 TNRTEG-GVCKGATVGVLLDLNKHTLTFFINGQQQGPTAF-SHVDGVFMPALSL-NRNVQ 762
Query: 468 VT--TGLQVPS 476
VT TGL+VP+
Sbjct: 763 VTLHTGLEVPT 773
>gi|190341104 tripartite motif protein 9 isoform 1 [Homo sapiens]
Length = 710
Score = 85.9 bits (211), Expect = 8e-17
Identities = 97/412 (23%), Positives = 168/412 (40%), Gaps = 82/412 (19%)
Query: 5 REALRKIIKTLAVKNEEIQSFIYSLKQMLLNVEANSAKVQEDLEAEFQSLFSLLEELKEG 64
+ L + + L+ + +E + F+ L+ M+ ++ NS + + L A+ +L L K
Sbjct: 274 KSQLSQALNGLSDRAKEAKEFLVQLRNMVQQIQENSVEFEACLVAQCDALIDALNRRKAQ 333
Query: 65 MLMKIKQDRASRTYELQNQLAACTRALESSEELLETANQTLQAMDSEDFPQAAKQIKDGV 124
+L ++ ++ + +++Q++ CT L + L+E + ++ D F Q + + V
Sbjct: 334 LLARVNKEHEHKLKVVRDQISHCTVKLRQTTGLMEYCLEVIKENDPSGFLQISDALIRRV 393
Query: 125 ----------TMAPAFRLSLKAKVSDNMSHLMVDFAQERQMLQALKFLPVPSAPVIDLAE 174
T+ P R++ +S + S L+ Q +Q PVP+ P++ L E
Sbjct: 394 HLTEDQWGKGTLTP--RMTTDFDLSLDNSPLLQSIHQ-LDFVQVKASSPVPATPILQLEE 450
Query: 175 SLVADNCVTLVWRMPDEDS-KIDHYVLEYRRTNFEGPPRLKEDQPWMVIEGIRQTEYTLT 233
+N TL W+ P + D Y+LE N Q V G ++T T+
Sbjct: 451 CCTHNNSATLSWKQPPLSTVPADGYILELDDGN--------GGQFREVYVG-KETMCTVD 501
Query: 234 GLKFDMKYMNFRVKACNKAVAGEFSEPVTLET-PAFMFRLDASTSHQN--LRVDDLSVEW 290
GL F+ Y N RVKA NK +S+ + L+T F D ++H + L D+L+V
Sbjct: 502 GLHFNSTY-NARVKAFNKTGVSPYSKTLVLQTSEVAWFAFDPGSAHSDIILSNDNLTVTC 560
Query: 291 DAMGGKVQDIKAREKDGKGRTASPINSPARGTPSPKRMPSGRGGRDRFTAESYTVLGDTL 350
+ +V VLG T
Sbjct: 561 SSYDDRV-----------------------------------------------VLGKTG 573
Query: 351 IDGGEHYWEV---RYE--PDSKAFGVGVAYRSLGRFEQLGKTAASWCLHVNN 397
G HYWE+ RY+ PD GVA + + LGK +W ++V+N
Sbjct: 574 FSKGIHYWELTVDRYDNHPDP---AFGVARMDVMKDVMLGKDDKAWAMYVDN 622
>gi|55741632 fibronectin type III and SPRY domain containing 2 [Homo
sapiens]
Length = 749
Score = 79.0 bits (193), Expect = 9e-15
Identities = 65/266 (24%), Positives = 123/266 (46%), Gaps = 20/266 (7%)
Query: 1 MEEQREALRKIIKTLAVKNEEIQSFIYSLKQMLLNVEANSAKVQEDLEAEFQSLFSLLEE 60
+E ++ + K + L + E+++F L+++ + VE N K +++ E+ + + L +
Sbjct: 209 LESAKDEIHKNMYKLEKQIIEMENFANHLEEVFITVEENFGKQEQNFESHYNEILETLAQ 268
Query: 61 LKEGMLMKIKQDRASRTYELQNQLAACTRALESSEELLETANQTLQAMDSEDFPQAAKQI 120
E + + + + + L QL +C L++ +EL+ET + + DF I
Sbjct: 269 KYEEKIQALGEKKKEKLEALYGQLVSCGENLDTCKELMETIEEMCHE-EKVDF------I 321
Query: 121 KDGVTMAPAFRLSLKAKVSDNMS------HLMVDFAQERQMLQALKFLPVPSAPVID-LA 173
KD V MA LK K +S +DF+ Q++ ++ +P PSAPVI+
Sbjct: 322 KDAVAMADRLGKFLKTKTDVEISAQPEFEDQTLDFSDVEQLMGSINTIPAPSAPVINPQV 381
Query: 174 ESLVADNCVTLVWRMPDEDSKIDHYVLEYRRTNFEGPPRLKEDQPWMVIEGIRQTEYTLT 233
+ + V + W + +D+ ++ Y L YR P DQ + +++T ++T
Sbjct: 382 PNSATGSSVRVCWSLYSDDT-VESYQLSYRPVQDSSP---GTDQAEFTVT-VKETYCSVT 436
Query: 234 GLKFDMKYMNFRVKACNKAVAGEFSE 259
L + +Y F V A N+A SE
Sbjct: 437 NLVPNTQY-EFWVTAHNRAGPSPSSE 461
Score = 74.3 bits (181), Expect = 2e-13
Identities = 78/321 (24%), Positives = 128/321 (39%), Gaps = 42/321 (13%)
Query: 161 FLPVPSAPVIDLAESLVADNCVTLVWRMPDEDSKIDHYVLEYRRTNFEGPPRLKEDQPWM 220
++ PS P+I E + V + W + + +D Y +E + + E
Sbjct: 465 YMTAPSPPIIKTKEIRSCEEAVLICWESGNLNP-VDSYTVELTQAESPEASGVTES---- 519
Query: 221 VIEGIRQTEYTLTGLKFDMKYMNFRVKACNKAVAGEFSEPVTLETPAFMFRLDASTSHQN 280
+ GI E ++ L+ Y+ + V+A N SEP T+ T FRL+ T H
Sbjct: 520 -VVGIPTCE-SVVQLQPGRSYIIY-VRALNMGGPSVRSEPATVHTIGSYFRLNKDTCHPW 576
Query: 281 LRVDDLSVEWDAMGGKVQDIKAREKDGKGRTASPINSPARGTPSPKRMPSGRGGRDRFTA 340
L + + DG S +PAR + PS D
Sbjct: 577 LTISE--------------------DGLTAVRSERRTPAR-----ELSPS-----DTHFT 606
Query: 341 ESYTVLGDTLIDGGEHYWEVRYEPDSKAFGVGVAYRSLGRFEQLGKTAASWCL-HVNNWL 399
V+G+ + G HYWEV + + + VGVA+ + + E LG SWC+ H
Sbjct: 607 RCVAVMGNLIPVRGHHYWEVEVD-EHLDYRVGVAFADVRKQEDLGANCLSWCMRHTFASS 665
Query: 400 QVSFTAKHANKVKVLDAPVPDC-LGVHCDFHQGLLSFYNARTKQVLHTFKTRFTQPLLPA 458
+ + H + VP +G+ D+ LSF+N Q L+TF + + + P
Sbjct: 666 RHKYEFLHNRTTPDIRITVPPKKIGILLDYEHSKLSFFNVDLSQHLYTFSCQLHEFVHPC 725
Query: 459 FTV-WCGSFQVTTGLQVPSAV 478
F++ G +V G+ +P V
Sbjct: 726 FSLEKPGCLKVHNGISMPKHV 746
>gi|62241003 cardiomyopathy associated 5 [Homo sapiens]
Length = 4069
Score = 75.9 bits (185), Expect = 8e-14
Identities = 103/530 (19%), Positives = 200/530 (37%), Gaps = 69/530 (13%)
Query: 8 LRKIIKTLAVKNEEIQSFIYSLKQMLLNVEANSAKVQEDLEAEFQSLFSLLEELKEGMLM 67
L + ++ L K+ I++F+ ++ +E N +K ++ LE + + + + +
Sbjct: 3549 LAEFLENLQEKSLRIEAFVSEIESFFNTIEENCSKNEKRLEEQNEEMMKKVLAQYDEKAQ 3608
Query: 68 KIKQDRASRTYELQNQLAACTRALESSEELLETANQTLQAMDSEDFPQAAKQIKDGVTMA 127
++ + + L Q+ ++++++++ LET + + +D F + ++I + + A
Sbjct: 3609 SFEEVKKKKMEFLHEQMVHFLQSMDTAKDTLETIVREAEELDEAVFLTSFEEINERLLSA 3668
Query: 128 PAFRLSLKAKVSDNMSHLMVDFAQERQMLQALKFLPVPSAPVIDLAE-SLVADNCVTLVW 186
SL+ + D + R Q LK + VP P ++ E + + + W
Sbjct: 3669 MESTASLEKMPAAFSLFEHYDDSSARSD-QMLKQVAVPQPPRLEPQEPNSATSTTIAVYW 3727
Query: 187 RM----------------PDEDSKIDHYVLEYRRTNFEGPPRLKEDQPWMVIEGIRQTEY 230
M P +D +++ V EYR T E ++ +P + +
Sbjct: 3728 SMNKEDVIDSFQVYCMEEPQDDQEVNELVEEYRLTVKESYCIFEDLEPDRCYQ-VWVMAV 3786
Query: 231 TLTGLKFDMKYMNFRVKACNKAVAGEF--------------SEPVTLETPAFMFRLDAST 276
TG + FR + E + P ET + S
Sbjct: 3787 NFTGCSLPSERAIFRTAPSTPVIRAEDCTVCWNTATIRWRPTTPEATETYTLEYCRQHSP 3846
Query: 277 SHQNLRVDDLSVEWDAMGGKVQDIKAREKDGKGRTASPINSPARGTPSPKRMPSGRG--- 333
+ LR + + G + + D IN+ S + S RG
Sbjct: 3847 EGEGLR------SFSGIKGLQLKVNLQPNDNYFFYVRAINAFGTSEQSEAALISTRGTRF 3900
Query: 334 ----------------------GRDRFTAESYTVLGDTLIDGGEHYWEVRYEPDSKAFGV 371
G R E +VLG+ L G+HYWE D A+ +
Sbjct: 3901 LLLRETAHPALHISSSGTVISFGERRRLTEIPSVLGEELPSCGQHYWETTVT-DCPAYRL 3959
Query: 372 GVAYRSLGRFEQLGKTAASWCLHVNNWLQVSFTAKH-ANKVKVLDAPVPDCLGVHCDFHQ 430
G+ S + LG+ SW +H + + +F + V V + P +G+ D++
Sbjct: 3960 GICSSSAVQAGALGQGETSWYMHCSEPQRYTFFYSGIVSDVHVTERPAR--VGILLDYNN 4017
Query: 431 GLLSFYNARTKQVLHTFKTRFTQPLLPAFTV-WCGSFQVTTGLQVPSAVR 479
L F NA ++Q+L + RF + + PAF + G + G++ P +VR
Sbjct: 4018 QRLIFINAESEQLLFIIRHRFNEGVHPAFALEKPGKCTLHLGIEPPDSVR 4067
>gi|16519559 tripartite motif protein 9 isoform 2 [Homo sapiens]
Length = 550
Score = 75.9 bits (185), Expect = 8e-14
Identities = 67/272 (24%), Positives = 123/272 (45%), Gaps = 24/272 (8%)
Query: 5 REALRKIIKTLAVKNEEIQSFIYSLKQMLLNVEANSAKVQEDLEAEFQSLFSLLEELKEG 64
+ L + + L+ + +E + F+ L+ M+ ++ NS + + L A+ +L L K
Sbjct: 274 KSQLSQALNGLSDRAKEAKEFLVQLRNMVQQIQENSVEFEACLVAQCDALIDALNRRKAQ 333
Query: 65 MLMKIKQDRASRTYELQNQLAACTRALESSEELLETANQTLQAMDSEDFPQAAKQIKDGV 124
+L ++ ++ + +++Q++ CT L + L+E + ++ D F Q + + V
Sbjct: 334 LLARVNKEHEHKLKVVRDQISHCTVKLRQTTGLMEYCLEVIKENDPSGFLQISDALIRRV 393
Query: 125 ----------TMAPAFRLSLKAKVSDNMSHLMVDFAQERQMLQALKFLPVPSAPVIDLAE 174
T+ P R++ +S + S L+ Q +Q PVP+ P++ L E
Sbjct: 394 HLTEDQWGKGTLTP--RMTTDFDLSLDNSPLLQSIHQ-LDFVQVKASSPVPATPILQLEE 450
Query: 175 SLVADNCVTLVWRMPDEDS-KIDHYVLEYRRTNFEGPPRLKEDQPWMVIEGIRQTEYTLT 233
+N TL W+ P + D Y+LE N Q V G ++T T+
Sbjct: 451 CCTHNNSATLSWKQPPLSTVPADGYILELDDGN--------GGQFREVYVG-KETMCTVD 501
Query: 234 GLKFDMKYMNFRVKACNKAVAGEFSEPVTLET 265
GL F+ Y N RVKA NK +S+ + L+T
Sbjct: 502 GLHFNSTY-NARVKAFNKTGVSPYSKTLVLQT 532
>gi|46409324 SPRY domain containing 4 [Homo sapiens]
Length = 207
Score = 68.6 bits (166), Expect = 1e-11
Identities = 44/135 (32%), Positives = 66/135 (48%), Gaps = 5/135 (3%)
Query: 345 VLGDTLIDGGEHYWEVRYEPDSKAFGVGVAYRSLGRFEQLGKTAASWCLHVNNWLQVSFT 404
VL DT + G HYWEV + S+ F +GVA + R +G SW V + Q +
Sbjct: 77 VLADTAVTSGRHYWEVTVKR-SQQFRIGVADVDMSRDSCIGVDDRSW---VFTYAQRKWY 132
Query: 405 AKHAN-KVKVLDAPVPDCLGVHCDFHQGLLSFYNARTKQVLHTFKTRFTQPLLPAFTVWC 463
AN K V P+ +G+ ++ LS + V+HT +T F P++PAF +W
Sbjct: 133 TMLANEKAPVEGIGQPEKVGLLLEYEAQKLSLVDVSQVSVVHTLQTDFRGPVVPAFALWD 192
Query: 464 GSFQVTTGLQVPSAV 478
G +GL+VP +
Sbjct: 193 GELLTHSGLEVPEGL 207
>gi|15208665 tripartite motif protein TRIM14 isoform alpha [Homo
sapiens]
Length = 442
Score = 65.1 bits (157), Expect = 1e-10
Identities = 43/132 (32%), Positives = 62/132 (46%), Gaps = 8/132 (6%)
Query: 343 YTVLGDTLIDGGEHYWEVRYEPDSKAFGVGVAYRSLGR-----FEQLGKTAASWCLHVNN 397
+ VL G HYWEV + + VG AY SL R +LG SWCL +
Sbjct: 309 WQVLARDCFATGRHYWEVDVQEAGAGWWVGAAYASLRRRGASAAARLGCNRQSWCLKRYD 368
Query: 398 WLQVSFTAKHANKVKVLDAPVPDCLGVHCDFHQGLLSFYNARTKQV-LHTFKTRFTQPLL 456
+F ++++ D D LGV D+ G+L+FY+ LHTF+ F +PL
Sbjct: 369 LEYWAFHDGQRSRLRPRDDL--DRLGVFLDYEAGVLAFYDVTGGMSHLHTFRATFQEPLY 426
Query: 457 PAFTVWCGSFQV 468
PA +W G+ +
Sbjct: 427 PALRLWEGAISI 438
>gi|15208663 tripartite motif protein TRIM14 isoform alpha [Homo
sapiens]
Length = 442
Score = 65.1 bits (157), Expect = 1e-10
Identities = 43/132 (32%), Positives = 62/132 (46%), Gaps = 8/132 (6%)
Query: 343 YTVLGDTLIDGGEHYWEVRYEPDSKAFGVGVAYRSLGR-----FEQLGKTAASWCLHVNN 397
+ VL G HYWEV + + VG AY SL R +LG SWCL +
Sbjct: 309 WQVLARDCFATGRHYWEVDVQEAGAGWWVGAAYASLRRRGASAAARLGCNRQSWCLKRYD 368
Query: 398 WLQVSFTAKHANKVKVLDAPVPDCLGVHCDFHQGLLSFYNARTKQV-LHTFKTRFTQPLL 456
+F ++++ D D LGV D+ G+L+FY+ LHTF+ F +PL
Sbjct: 369 LEYWAFHDGQRSRLRPRDDL--DRLGVFLDYEAGVLAFYDVTGGMSHLHTFRATFQEPLY 426
Query: 457 PAFTVWCGSFQV 468
PA +W G+ +
Sbjct: 427 PALRLWEGAISI 438
>gi|15208667 tripartite motif protein TRIM14 isoform alpha [Homo
sapiens]
Length = 442
Score = 65.1 bits (157), Expect = 1e-10
Identities = 43/132 (32%), Positives = 62/132 (46%), Gaps = 8/132 (6%)
Query: 343 YTVLGDTLIDGGEHYWEVRYEPDSKAFGVGVAYRSLGR-----FEQLGKTAASWCLHVNN 397
+ VL G HYWEV + + VG AY SL R +LG SWCL +
Sbjct: 309 WQVLARDCFATGRHYWEVDVQEAGAGWWVGAAYASLRRRGASAAARLGCNRQSWCLKRYD 368
Query: 398 WLQVSFTAKHANKVKVLDAPVPDCLGVHCDFHQGLLSFYNARTKQV-LHTFKTRFTQPLL 456
+F ++++ D D LGV D+ G+L+FY+ LHTF+ F +PL
Sbjct: 369 LEYWAFHDGQRSRLRPRDDL--DRLGVFLDYEAGVLAFYDVTGGMSHLHTFRATFQEPLY 426
Query: 457 PAFTVWCGSFQV 468
PA +W G+ +
Sbjct: 427 PALRLWEGAISI 438
>gi|19924163 muscle specific ring finger protein 1 [Homo sapiens]
Length = 353
Score = 64.7 bits (156), Expect = 2e-10
Identities = 43/159 (27%), Positives = 77/159 (48%), Gaps = 1/159 (0%)
Query: 4 QREALRKIIKTLAVKNEEIQSFIYSLKQMLLNVEANSAKVQEDLEAEFQSLFSLLEELKE 63
Q+ L I L N+ +Q+ I L+ + NS +V+E+L +F +L+++L+E K
Sbjct: 166 QKTELNNCISMLVAGNDRVQTIITQLEDSRRVTKENSHQVKEELSQKFDTLYAILDEKKS 225
Query: 64 GMLMKIKQDRASRTYELQNQLAACTRALESSEELLETANQTLQAMDSEDFPQAAKQ-IKD 122
+L +I Q++ + ++ + L+ S +L+ETA Q+L F AKQ IK
Sbjct: 226 ELLQRITQEQEKKLSFIEALIQQYQEQLDKSTKLVETAIQSLDEPGGATFLLTAKQLIKS 285
Query: 123 GVTMAPAFRLSLKAKVSDNMSHLMVDFAQERQMLQALKF 161
V + +L + +NM +D L+A+ F
Sbjct: 286 IVEASKGCQLGKTEQGFENMDFFTLDLEHIADALRAIDF 324
>gi|68160937 tripartite motif-containing 25 [Homo sapiens]
Length = 630
Score = 62.8 bits (151), Expect = 7e-10
Identities = 44/130 (33%), Positives = 65/130 (50%), Gaps = 9/130 (6%)
Query: 337 RFTAESYTVLGDTLIDGGEHYWEVRYEPDSKAFGVGVAYRSLGRF---EQLGKTAASWCL 393
RFT S VLG G HYWEV + ++ GVG+ Y S+ R +LG+ +ASWC+
Sbjct: 494 RFTYCSQ-VLGLHCYKKGIHYWEVELQKNNFC-GVGICYGSMNRQGPESRLGRNSASWCV 551
Query: 394 HVNNWLQVSFTAKHANKVKVLDAPVPDCLGVHCDFHQGLLSFYNARTK-QVLHTFKTRFT 452
W +A H N K L + +GV + G + F+ K +++ F+ FT
Sbjct: 552 E---WFNTKISAWHNNVEKTLPSTKATRVGVLLNCDHGFVIFFAVADKVHLMYKFRVDFT 608
Query: 453 QPLLPAFTVW 462
+ L PAF V+
Sbjct: 609 EALYPAFWVF 618
>gi|38679905 tripartite motif-containing 65 [Homo sapiens]
Length = 517
Score = 56.2 bits (134), Expect = 7e-08
Identities = 51/159 (32%), Positives = 66/159 (41%), Gaps = 16/159 (10%)
Query: 327 RMPSGRGGRDRFTAESYTVLGDTLIDGGEHYWEVRYEPDSKAFGVGVAYRSLGR------ 380
R G GG F E + V G HYWEVR S +GV+Y L R
Sbjct: 357 RQSRGPGGPGSF--ELWQVQCAQSFQAGHHYWEVRASDHSVT--LGVSYPQLPRCRLGPH 412
Query: 381 FEQLGKTAASWCLHVNNWLQVSFTAKHANKVKVLDAPVPDCLGVHCDFHQGLLSFYNART 440
+ +G+ SW L V + S A H + + L LG+ D G L+FY+
Sbjct: 413 TDNIGRGPCSWGLCVQ---EDSLQAWHNGEAQRLPGVSGRLLGMDLDLASGCLTFYSLEP 469
Query: 441 K-QVLHTFKTRFTQPLLPAFTVWCGSFQVTTGLQVPSAV 478
+ Q L+TF F QPL P F W + T P AV
Sbjct: 470 QTQPLYTFHALFNQPLTPVF--WLLEGRTLTLCHQPGAV 506
>gi|63054855 erythroblast membrane-associated protein precursor
[Homo sapiens]
Length = 475
Score = 56.2 bits (134), Expect = 7e-08
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 17/124 (13%)
Query: 344 TVLGDTLIDGGEHYWEVRYEPDSKAFGVGVAYRSLGRFEQLGKTAASWCLHVNNWLQVSF 403
++LG G HYWEV Y D + +GV S+ R ++ + A+ +WL
Sbjct: 281 SILGSEYFTTGCHYWEV-YVGDKTKWILGVCSESVSRKGKVTASPAN-----GHWL---L 331
Query: 404 TAKHANKVKVLDAPV--------PDCLGVHCDFHQGLLSFYNARTKQVLHTFKTRFTQPL 455
N+ + L +P P C+G+ D+ G++SFYN K + TF F+ PL
Sbjct: 332 RQSRGNEYEALTSPQTSFRLKEPPRCVGIFLDYEAGVISFYNVTNKSHIFTFTHNFSGPL 391
Query: 456 LPAF 459
P F
Sbjct: 392 RPFF 395
>gi|19923536 erythroblast membrane-associated protein precursor
[Homo sapiens]
Length = 475
Score = 56.2 bits (134), Expect = 7e-08
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 17/124 (13%)
Query: 344 TVLGDTLIDGGEHYWEVRYEPDSKAFGVGVAYRSLGRFEQLGKTAASWCLHVNNWLQVSF 403
++LG G HYWEV Y D + +GV S+ R ++ + A+ +WL
Sbjct: 281 SILGSEYFTTGCHYWEV-YVGDKTKWILGVCSESVSRKGKVTASPAN-----GHWL---L 331
Query: 404 TAKHANKVKVLDAPV--------PDCLGVHCDFHQGLLSFYNARTKQVLHTFKTRFTQPL 455
N+ + L +P P C+G+ D+ G++SFYN K + TF F+ PL
Sbjct: 332 RQSRGNEYEALTSPQTSFRLKEPPRCVGIFLDYEAGVISFYNVTNKSHIFTFTHNFSGPL 391
Query: 456 LPAF 459
P F
Sbjct: 392 RPFF 395
>gi|78482626 ring finger protein 30 isoform 2 [Homo sapiens]
Length = 358
Score = 55.8 bits (133), Expect = 9e-08
Identities = 39/173 (22%), Positives = 85/173 (49%), Gaps = 1/173 (0%)
Query: 2 EEQREALRKIIKTLAVKNEEIQSFIYSLKQMLLNVEANSAKVQEDLEAEFQSLFSLLEEL 61
+ Q+ L I L N+ +Q+ I ++++ +E NS + ++ L F+SL ++LEE
Sbjct: 168 KRQKSELSDGIAMLVAGNDRVQAVITQMEEVCQTIEDNSRRQKQLLNQRFESLCAVLEER 227
Query: 62 KEGMLMKIKQDRASRTYELQNQLAACTRALESSEELLETANQTLQAMDSEDFPQAAKQIK 121
K +L + +++ + ++ + LE+S +L+E+A Q+++ + Q AK++
Sbjct: 228 KGELLQALAREQEEKLQRVRGLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELI 287
Query: 122 DGVTMAPAFRLSLKAKVS-DNMSHLMVDFAQERQMLQALKFLPVPSAPVIDLA 173
+ V L+ + + ++M V +ML+ + F P S ++A
Sbjct: 288 NKVGAMSKVELAGRPEPGYESMEQFTVRVEHVAEMLRTIDFQPGASGEEEEVA 340
>gi|37655167 ring finger protein 135 isoform 1 [Homo sapiens]
Length = 432
Score = 54.7 bits (130), Expect = 2e-07
Identities = 39/130 (30%), Positives = 66/130 (50%), Gaps = 7/130 (5%)
Query: 337 RFTAESYT---VLGDTLIDGGEHYWEVRYEPDSKAFGVGVAYRSLGRFEQLGKTAASWCL 393
R++ E ++ VL + G+HYWEV + + VGVA + R + LG+T S C+
Sbjct: 291 RWSCERFSTSQVLCSQALSSGKHYWEVDTR-NCSHWAVGVASWEMSRDQVLGRTMDSCCV 349
Query: 394 HVNNWLQVSFTAKHANKVKVLDAPVPDCLGVHCDFHQGLLSFYNA-RTKQVLHTFKTRFT 452
Q+S A H K VL + P +G+ + +G L+FY+ +++L+ +
Sbjct: 350 EWKGTSQLS--AWHMVKETVLGSDRPGVVGIWLNLEEGKLAFYSVDNQEKLLYECTISAS 407
Query: 453 QPLLPAFTVW 462
PL PAF ++
Sbjct: 408 SPLYPAFWLY 417
>gi|22749269 ring finger protein 129 [Homo sapiens]
Length = 471
Score = 53.9 bits (128), Expect = 3e-07
Identities = 33/115 (28%), Positives = 50/115 (43%), Gaps = 1/115 (0%)
Query: 345 VLGDTLIDGGEHYWEVRYEPDSKAFGVGVAYRSLGRFEQLGKTAASWCLHVNNWLQVSFT 404
VLG G HYWEV K +GV L R Q + + +++ +
Sbjct: 339 VLGSQRFSSGRHYWEVEVGNKPKWI-LGVCQDCLLRNWQDQPSVLGGFWAIGRYMKSGYV 397
Query: 405 AKHANKVKVLDAPVPDCLGVHCDFHQGLLSFYNARTKQVLHTFKTRFTQPLLPAF 459
A ++L P +G+ D+ G LSFYN + +L+TF FT+ + P F
Sbjct: 398 ASGPKTTQLLPVVKPSKIGIFLDYELGDLSFYNMNDRSILYTFNDCFTEAVWPYF 452
>gi|78482627 ring finger protein 30 isoform 1 [Homo sapiens]
Length = 400
Score = 53.9 bits (128), Expect = 3e-07
Identities = 37/163 (22%), Positives = 81/163 (49%), Gaps = 1/163 (0%)
Query: 12 IKTLAVKNEEIQSFIYSLKQMLLNVEANSAKVQEDLEAEFQSLFSLLEELKEGMLMKIKQ 71
I L N+ +Q+ I ++++ +E NS + ++ L F+SL ++LEE K +L + +
Sbjct: 220 IAMLVAGNDRVQAVITQMEEVCQTIEDNSRRQKQLLNQRFESLCAVLEERKGELLQALAR 279
Query: 72 DRASRTYELQNQLAACTRALESSEELLETANQTLQAMDSEDFPQAAKQIKDGVTMAPAFR 131
++ + ++ + LE+S +L+E+A Q+++ + Q AK++ + V
Sbjct: 280 EQEEKLQRVRGLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELINKVGAMSKVE 339
Query: 132 LSLKAKVS-DNMSHLMVDFAQERQMLQALKFLPVPSAPVIDLA 173
L+ + + ++M V +ML+ + F P S ++A
Sbjct: 340 LAGRPEPGYESMEQFTVRVEHVAEMLRTIDFQPGASGEEEEVA 382
>gi|217035095 tripartite motif-containing 62 [Homo sapiens]
Length = 475
Score = 53.1 bits (126), Expect = 6e-07
Identities = 39/126 (30%), Positives = 62/126 (49%), Gaps = 6/126 (4%)
Query: 337 RFTAESYTVLGDTLIDGGEHYWEVRYEPDSKAFGVGVAYRSLGRFE--QLGKTAASWCLH 394
RF E +VLG G HYWEV + + +G+A+ + R Q+ + +C+
Sbjct: 333 RFDVE-VSVLGSEAFSSGVHYWEV-VVAEKTQWVIGLAHEAASRKGSIQIQPSRGFYCIV 390
Query: 395 VNNWLQVSFTAKHANKVKVLDAPVPDCLGVHCDFHQGLLSFYNARTKQVLHTFKTRFTQP 454
+++ Q S + ++ V D D +GV D+ QGLL FYNA L+TF+ +F
Sbjct: 391 MHDGNQYSACTEPWTRLNVRDKL--DKVGVFLDYDQGLLIFYNADDMSWLYTFREKFPGK 448
Query: 455 LLPAFT 460
L F+
Sbjct: 449 LCSYFS 454
Score = 29.3 bits (64), Expect = 8.6
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 8/85 (9%)
Query: 30 KQMLLNVEANSAKVQEDLEAEFQSLFSLLEELKEGMLMKIKQDRASRTYELQNQLAACTR 89
K ML +EA++A+ D+E + Q L +++EG +I Q+R + T + LA
Sbjct: 194 KAMLEELEADTARTLTDIEQKVQRYSQQLRKVQEG--AQILQERLAET-DRHTFLAGVAS 250
Query: 90 ALESSEELLETANQTLQAMDSEDFP 114
E + + N T EDFP
Sbjct: 251 LSERLKGKIHETNLTY-----EDFP 270
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.131 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,923,559
Number of Sequences: 37866
Number of extensions: 818349
Number of successful extensions: 3737
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 244
Number of HSP's that attempted gapping in prelim test: 3218
Number of HSP's gapped (non-prelim): 681
length of query: 496
length of database: 18,247,518
effective HSP length: 106
effective length of query: 390
effective length of database: 14,233,722
effective search space: 5551151580
effective search space used: 5551151580
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.