Guide to the Human Genome
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Name: SPRYD4 Sequence: fasta or formatted (207aa) NCBI GI: 46409324
Description:

SPRY domain containing 4

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7         18           1
 C cysteine            1.0          2           1
 D aspartate           5.3         11           2
 E glutamate           7.2         15           2
 F phenylalanine       3.9          8           1
 G glycine             7.7         16           1
 H histidine           1.9          4           1
 I isoleucine          1.4          3           1
 K lysine              4.8         10           1
 L leucine            11.6         24           3
 M methionine          1.4          3           1
 N asparagine          1.0          2           1
 P proline             2.9          6           1
 Q glutamine           3.9          8           2
 R arginine            7.2         15           1
 S serine              6.8         14           2
 T threonine           5.8         12           1
 V valine             12.1         25           2
 W tryptophan          2.9          6           1
 Y tyrosine            2.4          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   SPRY domain containing 4 
MID1                  0.154   midline 1 
MID1                  0.154   midline 1 
MID1                  0.154   midline 1 
FSD1L                 0.151   fibronectin type III and SPRY domain containing 1-li...
FSD1L                 0.151   fibronectin type III and SPRY domain containing 1-l...
TRIM58                0.146   tripartite motif-containing 58 
MID2                  0.136   midline 2 isoform 2 
MID2                  0.136   midline 2 isoform 1 
CMYA5                 0.133   cardiomyopathy associated 5 
TRIM50                0.131   tripartite motif protein 50A 
BTN1A1                0.131   butyrophilin, subfamily 1, member A1 
FSD2                  0.126   fibronectin type III and SPRY domain containing 2 [H...
TRIM14                0.115   tripartite motif protein TRIM14 isoform alpha 
TRIM14                0.115   tripartite motif protein TRIM14 isoform alpha 
TRIM14                0.115   tripartite motif protein TRIM14 isoform alpha 
FSD1                  0.113   fibronectin type III and SPRY domain containing 1 [H...
BTN3A1                0.103   butyrophilin, subfamily 3, member A1 isoform c [Hom...
BTN3A1                0.103   butyrophilin, subfamily 3, member A1 isoform a [Homo...
ERMAP                 0.100   erythroblast membrane-associated protein precursor [...
ERMAP                 0.100   erythroblast membrane-associated protein precursor [...
TRIM68                0.100   ring finger protein 137 
BSPRY                 0.100   B-box and SPRY domain containing 
TRIM39                0.097   tripartite motif-containing 39 isoform 2 
TRIM39                0.097   tripartite motif-containing 39 isoform 1 
RNF135                0.095   ring finger protein 135 isoform 1 
BTN3A3                0.095   butyrophilin, subfamily 3, member A3 isoform a 
BTN3A3                0.095   butyrophilin, subfamily 3, member A3 isoform b [Homo...
BTNL9                 0.090   butyrophilin-like 9 
BTNL8                 0.087   butyrophilin-like 8 isoform 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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