Guide to the Human Genome
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Name: AARS Sequence: fasta or formatted (968aa) NCBI GI: 109148542
Description:

alanyl-tRNA synthetase

Referenced in:

tRNA Enzymes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.2         89           3
 C cysteine            1.3         13           1
 D aspartate           7.7         75           2
 E glutamate           6.7         65           3
 F phenylalanine       3.8         37           2
 G glycine             8.1         78           3
 H histidine           1.8         17           2
 I isoleucine          5.1         49           2
 K lysine              6.8         66           2
 L leucine             9.5         92           2
 M methionine          2.5         24           1
 N asparagine          3.5         34           1
 P proline             3.6         35           1
 Q glutamine           4.3         42           2
 R arginine            5.1         49           3
 S serine              5.1         49           2
 T threonine           5.4         52           1
 V valine              7.0         68           3
 W tryptophan          0.8          8           1
 Y tyrosine            2.7         26           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   alanyl-tRNA synthetase 
AARS2                 0.408   alanyl-tRNA synthetase 2, mitochondrial 
AARSD1                0.013   alanyl-tRNA synthetase domain containing 1 isoform 2...
AARSD1                0.013   alanyl-tRNA synthetase domain containing 1 isoform ...
MYH9                  0.007   myosin, heavy polypeptide 9, non-muscle 
MYH11                 0.007   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.007   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.007   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.007   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
HSPA5                 0.005   heat shock 70kDa protein 5 
CDK5RAP2              0.005   CDK5 regulatory subunit associated protein 2 isoform...
CDK5RAP2              0.005   CDK5 regulatory subunit associated protein 2 isoform...
MACF1                 0.005   microfilament and actin filament cross-linker protei...
MACF1                 0.005   microfilament and actin filament cross-linker protei...
MACROD2               0.005   MACRO domain containing 2 isoform 1 
MACROD2               0.005   MACRO domain containing 2 isoform 2 
UBR2                  0.004   ubiquitin protein ligase E3 component n-recognin 2 [...
C12orf35              0.004   hypothetical protein LOC55196 
LRRC45                0.004   leucine rich repeat containing 45 
MYH7                  0.004   myosin, heavy chain 7, cardiac muscle, beta 
CCDC88B               0.004   coiled-coil domain containing 88 
ZRANB3                0.004   zinc finger, RAN-binding domain containing 3 
CEP135                0.004   centrosome protein 4 
TRIP11                0.004   thyroid hormone receptor interactor 11 
MYH1                  0.004   myosin, heavy chain 1, skeletal muscle, adult [Homo...
VPS13C                0.004   vacuolar protein sorting 13C protein isoform 1A [Hom...
VPS13C                0.004   vacuolar protein sorting 13C protein isoform 1B [Hom...
VPS13C                0.004   vacuolar protein sorting 13C protein isoform 2B [Hom...
VPS13C                0.004   vacuolar protein sorting 13C protein isoform 2A [Hom...
DST                   0.003   dystonin isoform 1e precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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