Guide to the Human Genome
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Name: AARS2 Sequence: fasta or formatted (985aa) NCBI GI: 38569417
Description:

alanyl-tRNA synthetase 2, mitochondrial

Referenced in:

tRNA Enzymes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.6        104           4
 C cysteine            1.8         18           2
 D aspartate           4.9         48           2
 E glutamate           6.6         65           2
 F phenylalanine       2.6         26           2
 G glycine             8.5         84           2
 H histidine           2.3         23           2
 I isoleucine          2.2         22           2
 K lysine              2.3         23           2
 L leucine            12.3        121           3
 M methionine          2.1         21           1
 N asparagine          1.9         19           1
 P proline             5.6         55           2
 Q glutamine           6.2         61           2
 R arginine            7.5         74           2
 S serine              6.0         59           2
 T threonine           5.0         49           2
 V valine              8.3         82           3
 W tryptophan          1.4         14           1
 Y tyrosine            1.7         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   alanyl-tRNA synthetase 2, mitochondrial 
AARS                  0.400   alanyl-tRNA synthetase 
AARSD1                0.019   alanyl-tRNA synthetase domain containing 1 isoform 2...
AARSD1                0.019   alanyl-tRNA synthetase domain containing 1 isoform ...
TBC1D2                0.005   TBC1 domain family, member 2 
ADAMTS16              0.005   ADAM metallopeptidase with thrombospondin type 1 mo...
FOXP1                 0.004   forkhead box P1 isoform 1 
CIT                   0.004   citron 
MYH14                 0.004   myosin, heavy chain 14 isoform 1 
MYH14                 0.004   myosin, heavy chain 14 isoform 2 
MYH14                 0.004   myosin, heavy chain 14 isoform 3 
KIFC1                 0.004   kinesin family member C1 
FOXD4L3               0.004   forkhead box D4-like 3 
FOXD4L6               0.004   forkhead box D4-like 6 
CSAD                  0.003   cysteine sulfinic acid decarboxylase 
TGM2                  0.003   transglutaminase 2 isoform b 
TGM2                  0.003   transglutaminase 2 isoform a 
LOC100292799          0.003   PREDICTED: hypothetical protein 
LOC100289819          0.003   PREDICTED: hypothetical protein XP_002347589 
LOC100287646          0.003   PREDICTED: hypothetical protein XP_002343394 
MNT                   0.003   MAX binding protein 
KLC2                  0.003   kinesin light chain 2 isoform 1 
KLC2                  0.003   kinesin light chain 2 isoform 1 
KLC2                  0.003   kinesin light chain 2 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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