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Search of human proteins with 10880989
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|10880989 RAB18, member RAS oncogene family [Homo sapiens]
(206 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|10880989 RAB18, member RAS oncogene family [Homo sapiens] 417 e-117
gi|4506365 RAB2A, member RAS oncogene family [Homo sapiens] 179 2e-45
gi|21361884 RAB2B protein isoform 1 [Homo sapiens] 173 1e-43
gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo sap... 168 3e-42
gi|33695095 ras-related GTP-binding protein RAB10 [Homo sapiens] 165 3e-41
gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens] 164 4e-41
gi|5803135 RAB35, member RAS oncogene family [Homo sapiens] 164 6e-41
gi|4506363 RAB13, member RAS oncogene family [Homo sapiens] 162 2e-40
gi|7706563 RAB8B, member RAS oncogene family [Homo sapiens] 162 2e-40
gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene fa... 159 1e-39
gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens] 159 1e-39
gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens] 159 1e-39
gi|106507164 RAB12, member RAS oncogene family [Homo sapiens] 158 3e-39
gi|21361418 RAB30, member RAS oncogene family [Homo sapiens] 158 3e-39
gi|16933567 mel transforming oncogene [Homo sapiens] 157 8e-39
gi|19923483 GTPase Rab14 [Homo sapiens] 155 3e-38
gi|19923750 RAB3B, member RAS oncogene family [Homo sapiens] 152 3e-37
gi|4506367 RAB3A, member RAS oncogene family [Homo sapiens] 150 7e-37
gi|4758984 Ras-related protein Rab-11A [Homo sapiens] 148 3e-36
gi|4759000 RAB3D, member RAS oncogene family [Homo sapiens] 147 5e-36
gi|190358517 RAB11B, member RAS oncogene family [Homo sapiens] 147 6e-36
gi|50234889 RAB43 protein [Homo sapiens] 147 8e-36
gi|46361978 RAB26, member RAS oncogene family [Homo sapiens] 145 2e-35
gi|19923260 RAB4A, member RAS oncogene family [Homo sapiens] 143 9e-35
gi|54859685 RAB37, member RAS oncogene family isoform 2 [Homo sa... 143 1e-34
gi|28376635 RAB37, member RAS oncogene family isoform 3 [Homo sa... 142 2e-34
gi|19923985 RAB3C, member RAS oncogene family [Homo sapiens] 142 2e-34
gi|116812567 RAB25 [Homo sapiens] 141 4e-34
gi|41393614 RAB5C, member RAS oncogene family isoform a [Homo sa... 139 1e-33
gi|41393545 RAB5C, member RAS oncogene family isoform b [Homo sa... 139 1e-33
>gi|10880989 RAB18, member RAS oncogene family [Homo sapiens]
Length = 206
Score = 417 bits (1073), Expect = e-117
Identities = 206/206 (100%), Positives = 206/206 (100%)
Query: 1 MDEDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLA 60
MDEDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLA
Sbjct: 1 MDEDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLA 60
Query: 61 IWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLV 120
IWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLV
Sbjct: 61 IWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLV 120
Query: 121 GNKIDKENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESEN 180
GNKIDKENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESEN
Sbjct: 121 GNKIDKENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESEN 180
Query: 181 QNKGVKLSHREEGQGGGACGGYCSVL 206
QNKGVKLSHREEGQGGGACGGYCSVL
Sbjct: 181 QNKGVKLSHREEGQGGGACGGYCSVL 206
>gi|4506365 RAB2A, member RAS oncogene family [Homo sapiens]
Length = 212
Score = 179 bits (453), Expect = 2e-45
Identities = 98/207 (47%), Positives = 133/207 (64%), Gaps = 16/207 (7%)
Query: 10 KILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQER 69
K +IIG++GVGKS LLL+FTD F P TIGV+F + I++DG + KL IWDTAGQE
Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQES 67
Query: 70 FRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKIDKEN- 128
FR++T SYYRGA G +LVYD+TRRDTF L WL + + N ++ ML+GNK D E+
Sbjct: 68 FRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVI-MLIGNKSDLESR 126
Query: 129 REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAF----EELVEKIIQTPGLWESENQNKG 184
REV + EG FAR+H ++F+E SAKT V+ AF +E+ EKI + G+++ N+ G
Sbjct: 127 REVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQE--GVFDINNEANG 184
Query: 185 VKLSHREE--------GQGGGACGGYC 203
+K+ + QGG GG C
Sbjct: 185 IKIGPQHAATNATHAGNQGGQQAGGGC 211
>gi|21361884 RAB2B protein isoform 1 [Homo sapiens]
Length = 216
Score = 173 bits (438), Expect = 1e-43
Identities = 91/187 (48%), Positives = 129/187 (68%), Gaps = 8/187 (4%)
Query: 10 KILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQER 69
K +IIG++GVGKS LLL+FTD F P TIGV+F + +++DG + KL IWDTAGQE
Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQES 67
Query: 70 FRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKIDKEN- 128
FR++T SYYRGA G +LVYD+TRR+TF L +WL + + + N ++ ML+GNK D E+
Sbjct: 68 FRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVI-MLIGNKSDLESR 126
Query: 129 REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAF----EELVEKIIQTPGLWESENQNKG 184
R+V R EG FAR+H ++F+E SAKT V+ AF +E+ KI Q GL++ N+ G
Sbjct: 127 RDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQ--GLFDVHNEANG 184
Query: 185 VKLSHRE 191
+K+ ++
Sbjct: 185 IKIGPQQ 191
>gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo
sapiens]
Length = 205
Score = 168 bits (426), Expect = 3e-42
Identities = 89/193 (46%), Positives = 121/193 (62%), Gaps = 4/193 (2%)
Query: 10 KILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQER 69
K+L+IG+SGVGKS LLLRF DDT+ +TIGVDFK++TI +DG KL IWDTAGQER
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER 72
Query: 70 FRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKIDKENR 129
FRT+T SYYRGA G+I+VYDVT +++F + WL E++ Y + N + +LVGNK D +
Sbjct: 73 FRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASEN-VNKLLVGNKCDLTTK 131
Query: 130 E-VDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQT--PGLWESENQNKGVK 186
+ VD +FA + F+E SAK V+ +F + +I + PG + VK
Sbjct: 132 KVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKSNVK 191
Query: 187 LSHREEGQGGGAC 199
+ Q GG C
Sbjct: 192 IQSTPVKQSGGGC 204
>gi|33695095 ras-related GTP-binding protein RAB10 [Homo sapiens]
Length = 200
Score = 165 bits (417), Expect = 3e-41
Identities = 83/192 (43%), Positives = 121/192 (63%), Gaps = 9/192 (4%)
Query: 10 KILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQER 69
K+L+IG+SGVGK+ +L RF+DD F+ +TIG+DFK+KT+ + G K KL IWDTAGQER
Sbjct: 11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 70
Query: 70 FRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKIDKEN- 128
F T+T SYYRGA G++LVYD+T +F + WL ++ + D+ ML+GNK D ++
Sbjct: 71 FHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEH-ANEDVERMLLGNKCDMDDK 129
Query: 129 REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESENQNKGVKLS 188
R V + +G + AR+H + F E SAK ++ AF L E I++ + E ++N +
Sbjct: 130 RVVPKGKGGQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSENVDI--- 186
Query: 189 HREEGQGGGACG 200
GGG G
Sbjct: 187 ----SSGGGVTG 194
>gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens]
Length = 201
Score = 164 bits (416), Expect = 4e-41
Identities = 88/193 (45%), Positives = 121/193 (62%), Gaps = 5/193 (2%)
Query: 10 KILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQER 69
K+L+IG+SGVGKS LLLRF DDT+ +TIGVDFK++TI +DG KL IWDTAGQER
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER 69
Query: 70 FRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKIDKENR 129
FRT+T SYYRGA G+I+VYDVT ++++ + WL E++ Y + N + +LVGNK D +
Sbjct: 70 FRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASEN-VNKLLVGNKSDLTTK 128
Query: 130 E-VDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQT--PGLWESENQNKGVK 186
+ VD +FA + F+E SAK V+ AF + +I + PG S + +K
Sbjct: 129 KVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGA-ASGGERPNLK 187
Query: 187 LSHREEGQGGGAC 199
+ GG C
Sbjct: 188 IDSTPVKPAGGGC 200
>gi|5803135 RAB35, member RAS oncogene family [Homo sapiens]
Length = 201
Score = 164 bits (414), Expect = 6e-41
Identities = 89/193 (46%), Positives = 121/193 (62%), Gaps = 7/193 (3%)
Query: 1 MDEDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLA 60
M D K+LIIG+SGVGKSSLLLRF D+TF TIGVDFK++T+ ++G K KL
Sbjct: 1 MARDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQ 60
Query: 61 IWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLV 120
IWDTAGQERFRT+T +YYRG GVI+VYDVT ++FV + WL+E+ C +D+ +LV
Sbjct: 61 IWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNC--DDVCRILV 118
Query: 121 GNK-IDKENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTP----GL 175
GNK D E + V+ + KFA + + E SAK V+ F + E +++
Sbjct: 119 GNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAK 178
Query: 176 WESENQNKGVKLS 188
+ + QN VKL+
Sbjct: 179 QQQQQQNDVVKLT 191
>gi|4506363 RAB13, member RAS oncogene family [Homo sapiens]
Length = 203
Score = 162 bits (409), Expect = 2e-40
Identities = 78/175 (44%), Positives = 115/175 (65%), Gaps = 2/175 (1%)
Query: 10 KILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQER 69
K+L+IG+SGVGK+ L++RF +D F+ +TIG+DFK++T+ ++G K KL +WDTAGQER
Sbjct: 10 KLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQER 69
Query: 70 FRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKIDKE-N 128
F+T+T +YYRGA G+ILVYD+T +F + NW+ ++ + + +L+GNK D E
Sbjct: 70 FKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAG-VERLLLGNKCDMEAK 128
Query: 129 REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESENQNK 183
R+V + + K AR+H + F E SAK+ V AF L I+ G S N NK
Sbjct: 129 RKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGNGNK 183
>gi|7706563 RAB8B, member RAS oncogene family [Homo sapiens]
Length = 207
Score = 162 bits (409), Expect = 2e-40
Identities = 77/162 (47%), Positives = 113/162 (69%), Gaps = 2/162 (1%)
Query: 10 KILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQER 69
K+L+IG+SGVGK+ LL RF++D F+ +TIG+DFK++TI +DG K KL IWDTAGQER
Sbjct: 10 KLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQER 69
Query: 70 FRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKID-KEN 128
FRT+T +YYRGA G++LVYD+T +F + NW+ +E + + +D+ M++GNK D +
Sbjct: 70 FRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHAS-SDVERMILGNKCDMNDK 128
Query: 129 REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKII 170
R+V + G K A + + F+E SAK+ V+ AF L I+
Sbjct: 129 RQVSKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLARDIM 170
>gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene
family [Homo sapiens]
Length = 327
Score = 159 bits (403), Expect = 1e-39
Identities = 77/175 (44%), Positives = 114/175 (65%), Gaps = 2/175 (1%)
Query: 10 KILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQER 69
K+L+IG+SGVGK+ L++RF +D F+ +TIG+DFK++T+ ++G K KL +WDTAGQER
Sbjct: 134 KLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQER 193
Query: 70 FRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKIDKE-N 128
F+T+T +YYRGA G+IL YD+T +F + NW+ + + + ++L+GNK D E
Sbjct: 194 FKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAG-VEHLLLGNKCDMEAK 252
Query: 129 REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESENQNK 183
R+V + + K AR+H + F E SAK+ V AF L I+ G S N NK
Sbjct: 253 RKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGNGNK 307
>gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens]
Length = 327
Score = 159 bits (403), Expect = 1e-39
Identities = 77/175 (44%), Positives = 114/175 (65%), Gaps = 2/175 (1%)
Query: 10 KILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQER 69
K+L+IG+SGVGK+ L++RF +D F+ +TIG+DFK++T+ ++G K KL +WDTAGQER
Sbjct: 134 KLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQER 193
Query: 70 FRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKIDKE-N 128
F+T+T +YYRGA G+IL YD+T +F + NW+ + + + ++L+GNK D E
Sbjct: 194 FKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAG-VEHLLLGNKCDMEAK 252
Query: 129 REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESENQNK 183
R+V + + K AR+H + F E SAK+ V AF L I+ G S N NK
Sbjct: 253 RKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGNGNK 307
>gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens]
Length = 327
Score = 159 bits (403), Expect = 1e-39
Identities = 77/175 (44%), Positives = 114/175 (65%), Gaps = 2/175 (1%)
Query: 10 KILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQER 69
K+L+IG+SGVGK+ L++RF +D F+ +TIG+DFK++T+ ++G K KL +WDTAGQER
Sbjct: 134 KLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQER 193
Query: 70 FRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKIDKE-N 128
F+T+T +YYRGA G+IL YD+T +F + NW+ + + + ++L+GNK D E
Sbjct: 194 FKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAG-VEHLLLGNKCDMEAK 252
Query: 129 REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESENQNK 183
R+V + + K AR+H + F E SAK+ V AF L I+ G S N NK
Sbjct: 253 RKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGNGNK 307
>gi|106507164 RAB12, member RAS oncogene family [Homo sapiens]
Length = 244
Score = 158 bits (400), Expect = 3e-39
Identities = 82/165 (49%), Positives = 117/165 (70%), Gaps = 3/165 (1%)
Query: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
L+++IIG GVGK+SL+ RFTDDTF +T+GVDFK+KT+ + G K +L IWDTAGQE
Sbjct: 43 LQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQE 102
Query: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKIDKE- 127
RF ++T +YYR A+G+ILVYD+T+++TF L W+ ++ Y + D +LVGNK+D E
Sbjct: 103 RFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYAS-EDAELLLVGNKLDCET 161
Query: 128 NREVDRNEGLKFARK-HSMLFIEASAKTCDGVQCAFEELVEKIIQ 171
+RE+ R +G KFA++ M F EASAK V F +LV+ I++
Sbjct: 162 DREITRQQGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILK 206
>gi|21361418 RAB30, member RAS oncogene family [Homo sapiens]
Length = 203
Score = 158 bits (400), Expect = 3e-39
Identities = 81/169 (47%), Positives = 110/169 (65%), Gaps = 2/169 (1%)
Query: 3 EDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIW 62
ED KI++IG +GVGK+ L+ RFT F P ATIGVDF +KT+ ++G K KL IW
Sbjct: 4 EDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIW 63
Query: 63 DTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGN 122
DTAGQERFR++T SYYR A +IL YD+T ++F L WL E+E Y + N ++ +LVGN
Sbjct: 64 DTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYAS-NKVITVLVGN 122
Query: 123 KID-KENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKII 170
KID E REV + +F+ M ++E SAK D V+ F +L ++I
Sbjct: 123 KIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLI 171
>gi|16933567 mel transforming oncogene [Homo sapiens]
Length = 207
Score = 157 bits (396), Expect = 8e-39
Identities = 75/161 (46%), Positives = 110/161 (68%), Gaps = 2/161 (1%)
Query: 10 KILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQER 69
K+L+IG+SGVGK+ +L RF++D F+ +TIG+DFK++TI +DG + KL IWDTAGQER
Sbjct: 10 KLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQER 69
Query: 70 FRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKID-KEN 128
FRT+T +YYRGA G++LVYD+T +F + NW+ +E + + D+ M++GNK D +
Sbjct: 70 FRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASA-DVEKMILGNKCDVNDK 128
Query: 129 REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKI 169
R+V + G K A + + F+E SAK V+ AF L I
Sbjct: 129 RQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDI 169
>gi|19923483 GTPase Rab14 [Homo sapiens]
Length = 215
Score = 155 bits (391), Expect = 3e-38
Identities = 87/191 (45%), Positives = 117/191 (61%), Gaps = 6/191 (3%)
Query: 10 KILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQER 69
K +IIG+ GVGKS LL +FT+ F + TIGV+F + I V G K KL IWDTAGQER
Sbjct: 13 KYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQER 72
Query: 70 FRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKIDKE-N 128
FR +T SYYRGA G ++VYD+TRR T+ L +WL + N ++ +L+GNK D E
Sbjct: 73 FRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVI-ILIGNKADLEAQ 131
Query: 129 REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQT--PGLWESENQNKGVK 186
R+V E +FA ++ +LF+EASAKT + V+ AF E +KI Q G + GV+
Sbjct: 132 RDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAAESGVQ 191
Query: 187 LSHREEGQGGG 197
H+ GG
Sbjct: 192 --HKPSAPQGG 200
>gi|19923750 RAB3B, member RAS oncogene family [Homo sapiens]
Length = 219
Score = 152 bits (383), Expect = 3e-37
Identities = 81/169 (47%), Positives = 109/169 (64%), Gaps = 2/169 (1%)
Query: 2 DEDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAI 61
D++ K+LIIG S VGK+S L R+ DDTF P +T+G+DFKVKT+ + KL I
Sbjct: 16 DQNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQI 75
Query: 62 WDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVG 121
WDTAGQER+RT+T +YYRGA G IL+YD+T ++F + +W +++TY N V +LVG
Sbjct: 76 WDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQV-ILVG 134
Query: 122 NKID-KENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKI 169
NK D +E R V +G A + F EASAK V+ AFE LV+ I
Sbjct: 135 NKCDMEEERVVPTEKGQLLAEQLGFDFFEASAKENISVRQAFERLVDAI 183
>gi|4506367 RAB3A, member RAS oncogene family [Homo sapiens]
Length = 220
Score = 150 bits (379), Expect = 7e-37
Identities = 81/171 (47%), Positives = 109/171 (63%), Gaps = 2/171 (1%)
Query: 2 DEDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAI 61
D++ KILIIG S VGK+S L R+ DD+F P +T+G+DFKVKTI + + KL I
Sbjct: 16 DQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQI 75
Query: 62 WDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVG 121
WDTAGQER+RT+T +YYRGA G IL+YD+T ++F + +W +++TY N V +LVG
Sbjct: 76 WDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQV-LLVG 134
Query: 122 NKIDKEN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQ 171
NK D E+ R V G + A F EASAK V+ FE LV+ I +
Sbjct: 135 NKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICE 185
>gi|4758984 Ras-related protein Rab-11A [Homo sapiens]
Length = 216
Score = 148 bits (374), Expect = 3e-36
Identities = 78/169 (46%), Positives = 110/169 (65%), Gaps = 2/169 (1%)
Query: 2 DEDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAI 61
D++ K+++IG+SGVGKS+LL RFT + F+ E +TIGV+F ++I VDG K I
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 62 WDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVG 121
WDTAGQER+R +T +YYRGA G +LVYD+ + T+ ++ WL EL + N IV MLVG
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSN-IVIMLVG 123
Query: 122 NKID-KENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKI 169
NK D + R V +E FA K+ + FIE SA V+ AF+ ++ +I
Sbjct: 124 NKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEI 172
>gi|4759000 RAB3D, member RAS oncogene family [Homo sapiens]
Length = 219
Score = 147 bits (372), Expect = 5e-36
Identities = 82/201 (40%), Positives = 117/201 (58%), Gaps = 10/201 (4%)
Query: 2 DEDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAI 61
D++ K+L+IG S VGK+S L R+ DD+F P +T+G+DFKVKT+ + KL I
Sbjct: 16 DQNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQI 75
Query: 62 WDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVG 121
WDTAGQER+RT+T +YYRGA G +L+YD+ +++F + +W +++TY N V +LVG
Sbjct: 76 WDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFAAVQDWATQIKTYSWDNAQV-ILVG 134
Query: 122 NKIDKEN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESEN 180
NK D E+ R V +G + A F EASAK V+ FE LV+ I E
Sbjct: 135 NKCDLEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERLVDVI--------CEK 186
Query: 181 QNKGVKLSHREEGQGGGACGG 201
N+ ++ S G G G
Sbjct: 187 MNESLEPSSSSGSNGKGPAVG 207
>gi|190358517 RAB11B, member RAS oncogene family [Homo sapiens]
Length = 218
Score = 147 bits (371), Expect = 6e-36
Identities = 78/169 (46%), Positives = 111/169 (65%), Gaps = 2/169 (1%)
Query: 2 DEDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAI 61
D++ K+++IG+SGVGKS+LL RFT + F+ E +TIGV+F ++I VDG K I
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 62 WDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVG 121
WDTAGQER+R +T +YYRGA G +LVYD+ + T+ ++ WL EL + N IV MLVG
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSN-IVIMLVG 123
Query: 122 NKID-KENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKI 169
NK D + R V +E FA K+++ FIE SA V+ AF+ ++ +I
Sbjct: 124 NKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEI 172
>gi|50234889 RAB43 protein [Homo sapiens]
Length = 212
Score = 147 bits (370), Expect = 8e-36
Identities = 83/202 (41%), Positives = 121/202 (59%), Gaps = 5/202 (2%)
Query: 2 DEDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAI 61
DE K++++G++ VGK+ ++ RF F +TIGVDF +KT+ + G + KL I
Sbjct: 12 DEQYDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQI 71
Query: 62 WDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVG 121
WDTAGQERFRT+T SYYR A G IL YD+T+R +F+ + +W+ ++ Y N IV +L+G
Sbjct: 72 WDTAGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSN-IVQLLIG 130
Query: 122 NKID-KENREVDRNEGLKFARKHSML-FIEASAKTCDGVQCAFEEL-VEKIIQTPGLWES 178
NK D E REV E A + +L IE SAK V+ AF + E I++ G S
Sbjct: 131 NKSDLSELREVSLAEAQSLAEHYDILCAIETSAKDSSNVEEAFLRVATELIMRHGGPLFS 190
Query: 179 ENQNKGVKLSHREEGQGGGACG 200
E ++L+ ++ G+G G CG
Sbjct: 191 EKSPDHIQLNSKDIGEGWG-CG 211
>gi|46361978 RAB26, member RAS oncogene family [Homo sapiens]
Length = 256
Score = 145 bits (366), Expect = 2e-35
Identities = 78/192 (40%), Positives = 121/192 (63%), Gaps = 4/192 (2%)
Query: 10 KILIIGESGVGKSSLLLRFTDDTF-DPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
K++++G+SGVGK+ LL+RF D F +T+G+DF+ K + VDG K KL +WDTAGQE
Sbjct: 65 KVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWDTAGQE 124
Query: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKIDK-E 127
RFR++T +YYR A ++L+YDVT + +F + WL E+ Y ++D+ ML+GNK+D
Sbjct: 125 RFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEY-AQHDVALMLLGNKVDSAH 183
Query: 128 NREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESENQNKGVKL 187
R V R +G K A+++ + F+E SAKT V AF + +++ Q SE + + +
Sbjct: 184 ERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIAKELKQRSMKAPSEPRFR-LHD 242
Query: 188 SHREEGQGGGAC 199
+ EG+G C
Sbjct: 243 YVKREGRGASCC 254
>gi|19923260 RAB4A, member RAS oncogene family [Homo sapiens]
Length = 218
Score = 143 bits (361), Expect = 9e-35
Identities = 82/189 (43%), Positives = 115/189 (60%), Gaps = 4/189 (2%)
Query: 1 MDEDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLA 60
M E K L+IG +G GKS LL +F + F + TIGV+F K I+V G KL
Sbjct: 6 MSETYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQ 65
Query: 61 IWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLV 120
IWDTAGQERFR++T SYYRGA G +LVYD+T R+T+ L NWL + ++N IV +L
Sbjct: 66 IWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQN-IVIILC 124
Query: 121 GNKIDKE-NREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQ--TPGLWE 177
GNK D + +REV E +FA+++ ++F+E SA T + V+ AF + KI+ G +
Sbjct: 125 GNKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELD 184
Query: 178 SENQNKGVK 186
E G++
Sbjct: 185 PERMGSGIQ 193
>gi|54859685 RAB37, member RAS oncogene family isoform 2 [Homo
sapiens]
Length = 223
Score = 143 bits (360), Expect = 1e-34
Identities = 72/164 (43%), Positives = 111/164 (67%), Gaps = 3/164 (1%)
Query: 8 TLKILIIGESGVGKSSLLLRFTDDTF-DPELAATIGVDFKVKTISVDGNKAKLAIWDTAG 66
T K++++G++GVGK+ L++F D F AT+G+DF+ K ++VDG + KL IWDTAG
Sbjct: 29 TGKVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGVRVKLQIWDTAG 88
Query: 67 QERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKIDK 126
QERFR++T +YYR AQ ++L+YD+T + +F + WL E+ Y R D+V ML+GNK D
Sbjct: 89 QERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQR-DVVIMLLGNKADM 147
Query: 127 ENREVDRNE-GLKFARKHSMLFIEASAKTCDGVQCAFEELVEKI 169
+ V R+E G AR++ + F+E SAKT V+ AF + +++
Sbjct: 148 SSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKEL 191
>gi|28376635 RAB37, member RAS oncogene family isoform 3 [Homo
sapiens]
Length = 216
Score = 142 bits (359), Expect = 2e-34
Identities = 73/162 (45%), Positives = 110/162 (67%), Gaps = 3/162 (1%)
Query: 10 KILIIGESGVGKSSLLLRFTDDTFDP-ELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
K +++G+SGVGK+SLL++F F P +AT+G+ F K ++VDG + KL IWDTAGQE
Sbjct: 24 KTILVGDSGVGKTSLLVQFDQGKFIPGSFSATVGIGFTNKVVTVDGVRVKLQIWDTAGQE 83
Query: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKIDKEN 128
RFR++T +YYR AQ ++L+YD+T + +F + WL E+ Y R D+V ML+GNK D +
Sbjct: 84 RFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQR-DVVIMLLGNKADMSS 142
Query: 129 REVDRNE-GLKFARKHSMLFIEASAKTCDGVQCAFEELVEKI 169
V R+E G AR++ + F+E SAKT V+ AF + +++
Sbjct: 143 ERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKEL 184
>gi|19923985 RAB3C, member RAS oncogene family [Homo sapiens]
Length = 227
Score = 142 bits (358), Expect = 2e-34
Identities = 75/169 (44%), Positives = 105/169 (62%), Gaps = 2/169 (1%)
Query: 2 DEDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAI 61
D++ K+LIIG S VGK+S L R+ DD+F +T+G+DFKVKT+ + + KL I
Sbjct: 24 DQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQI 83
Query: 62 WDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVG 121
WDTAGQER+RT+T +YYRGA G IL+YD+T ++F + +W +++TY N V +LVG
Sbjct: 84 WDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQV-ILVG 142
Query: 122 NKIDKEN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKI 169
NK D E+ R + G + F E SAK V+ FE LV+ I
Sbjct: 143 NKCDMEDERVISTERGQHLGEQLGFEFFETSAKDNINVKQTFERLVDII 191
>gi|116812567 RAB25 [Homo sapiens]
Length = 213
Score = 141 bits (355), Expect = 4e-34
Identities = 74/169 (43%), Positives = 106/169 (62%), Gaps = 2/169 (1%)
Query: 2 DEDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAI 61
+ED K+++IGESGVGK++LL RFT + F + TIGV+F +T+ + K I
Sbjct: 6 EEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQI 65
Query: 62 WDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVG 121
WDTAG ER+R +T +YYRGA G +LV+D+T+ T+ ++ WL EL + IV MLVG
Sbjct: 66 WDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEAT-IVVMLVG 124
Query: 122 NKID-KENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKI 169
NK D + REV E FA + +LF+E SA V+ AFE ++++I
Sbjct: 125 NKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEI 173
>gi|41393614 RAB5C, member RAS oncogene family isoform a [Homo
sapiens]
Length = 216
Score = 139 bits (351), Expect = 1e-33
Identities = 78/193 (40%), Positives = 107/193 (55%), Gaps = 4/193 (2%)
Query: 10 KILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQER 69
K++++GES VGKSSL+LRF F +TIG F +T+ +D K IWDTAGQER
Sbjct: 23 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQER 82
Query: 70 FRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKID-KEN 128
+ +L P YYRGAQ I+VYD+T DTF + NW+ EL+ + N IV L GNK D
Sbjct: 83 YHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPN-IVIALAGNKADLASK 141
Query: 129 REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKI--IQTPGLWESENQNKGVK 186
R V+ E +A +S+LF+E SAKT V F + +K+ + + +N+GV
Sbjct: 142 RAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNATGAPGRNRGVD 201
Query: 187 LSHREEGQGGGAC 199
L C
Sbjct: 202 LQENNPASRSQCC 214
>gi|41393545 RAB5C, member RAS oncogene family isoform b [Homo
sapiens]
Length = 216
Score = 139 bits (351), Expect = 1e-33
Identities = 78/193 (40%), Positives = 107/193 (55%), Gaps = 4/193 (2%)
Query: 10 KILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQER 69
K++++GES VGKSSL+LRF F +TIG F +T+ +D K IWDTAGQER
Sbjct: 23 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQER 82
Query: 70 FRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKID-KEN 128
+ +L P YYRGAQ I+VYD+T DTF + NW+ EL+ + N IV L GNK D
Sbjct: 83 YHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPN-IVIALAGNKADLASK 141
Query: 129 REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKI--IQTPGLWESENQNKGVK 186
R V+ E +A +S+LF+E SAKT V F + +K+ + + +N+GV
Sbjct: 142 RAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNATGAPGRNRGVD 201
Query: 187 LSHREEGQGGGAC 199
L C
Sbjct: 202 LQENNPASRSQCC 214
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.136 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,530,086
Number of Sequences: 37866
Number of extensions: 299382
Number of successful extensions: 1351
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 216
Number of HSP's successfully gapped in prelim test: 49
Number of HSP's that attempted gapping in prelim test: 951
Number of HSP's gapped (non-prelim): 270
length of query: 206
length of database: 18,247,518
effective HSP length: 97
effective length of query: 109
effective length of database: 14,574,516
effective search space: 1588622244
effective search space used: 1588622244
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.