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Search of human proteins with 4508017
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4508017 zinc finger protein 207 isoform a [Homo sapiens]
(478 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4508017 zinc finger protein 207 isoform a [Homo sapiens] 1015 0.0
gi|148612835 zinc finger protein 207 isoform c [Homo sapiens] 1004 0.0
gi|73808090 zinc finger protein 207 isoform b [Homo sapiens] 929 0.0
gi|160707881 formin 2 [Homo sapiens] 103 4e-22
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 102 1e-21
gi|163965366 nascent polypeptide-associated complex alpha subuni... 96 5e-20
gi|7706501 WW domain binding protein 11 [Homo sapiens] 96 7e-20
gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2 ... 89 9e-18
gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1 [... 89 9e-18
gi|146134388 YLP motif containing 1 [Homo sapiens] 85 2e-16
gi|91208418 transcription elongation regulator 1 isoform 2 [Homo... 84 3e-16
gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3 ... 83 5e-16
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 82 1e-15
gi|55750053 atrophin-1 [Homo sapiens] 81 2e-15
gi|55750041 atrophin-1 [Homo sapiens] 81 2e-15
gi|116284392 mucin 2 precursor [Homo sapiens] 79 9e-15
gi|21361376 splicing factor 3a, subunit 2 [Homo sapiens] 79 1e-14
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 78 2e-14
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 78 2e-14
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 77 3e-14
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 77 4e-14
gi|21327715 transcription elongation regulator 1 isoform 1 [Homo... 76 6e-14
gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens] 75 1e-13
gi|162329583 cleavage and polyadenylation specific factor 6, 68 ... 75 1e-13
gi|150170670 piccolo isoform 2 [Homo sapiens] 75 1e-13
gi|150378539 piccolo isoform 1 [Homo sapiens] 75 1e-13
gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens] 74 3e-13
gi|15890086 type IV collagen alpha 5 isoform 2 precursor [Homo s... 74 4e-13
gi|4502955 type IV collagen alpha 5 isoform 1 precursor [Homo sa... 74 4e-13
gi|15890088 type IV collagen alpha 5 isoform 3 precursor [Homo s... 74 4e-13
>gi|4508017 zinc finger protein 207 isoform a [Homo sapiens]
Length = 478
Score = 1015 bits (2624), Expect = 0.0
Identities = 478/478 (100%), Positives = 478/478 (100%)
Query: 1 MGRKKKKQLKPWCWYCNRDFDDEKILIQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHKE 60
MGRKKKKQLKPWCWYCNRDFDDEKILIQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHKE
Sbjct: 1 MGRKKKKQLKPWCWYCNRDFDDEKILIQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHKE 60
Query: 61 TIDAVPNAIPGRTDIELEIYGMEGIPEKDMDERRRLLEQKTQESQKKKQQDDSDEYDDDD 120
TIDAVPNAIPGRTDIELEIYGMEGIPEKDMDERRRLLEQKTQESQKKKQQDDSDEYDDDD
Sbjct: 61 TIDAVPNAIPGRTDIELEIYGMEGIPEKDMDERRRLLEQKTQESQKKKQQDDSDEYDDDD 120
Query: 121 SAASTSFQPQPVQPQQGYIPPMAQPGLPPVPGAPGMPPGIPPLMPGVPPLMPGMPPVMPG 180
SAASTSFQPQPVQPQQGYIPPMAQPGLPPVPGAPGMPPGIPPLMPGVPPLMPGMPPVMPG
Sbjct: 121 SAASTSFQPQPVQPQQGYIPPMAQPGLPPVPGAPGMPPGIPPLMPGVPPLMPGMPPVMPG 180
Query: 181 MPPGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPT 240
MPPGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPT
Sbjct: 181 MPPGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPT 240
Query: 241 ATVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPV 300
ATVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPV
Sbjct: 241 ATVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPV 300
Query: 301 GTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSAT 360
GTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSAT
Sbjct: 301 GTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSAT 360
Query: 361 SKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNPPVGPIGGMMPPQPGIPQQQGMRP 420
SKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNPPVGPIGGMMPPQPGIPQQQGMRP
Sbjct: 361 SKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNPPVGPIGGMMPPQPGIPQQQGMRP 420
Query: 421 PMPPHGQYGGHHQGMPGYLPGAMPPYGQGPPMVPPYQGGPPRPPMGMRPPVMSQGGRY 478
PMPPHGQYGGHHQGMPGYLPGAMPPYGQGPPMVPPYQGGPPRPPMGMRPPVMSQGGRY
Sbjct: 421 PMPPHGQYGGHHQGMPGYLPGAMPPYGQGPPMVPPYQGGPPRPPMGMRPPVMSQGGRY 478
>gi|148612835 zinc finger protein 207 isoform c [Homo sapiens]
Length = 494
Score = 1004 bits (2597), Expect = 0.0
Identities = 478/494 (96%), Positives = 478/494 (96%), Gaps = 16/494 (3%)
Query: 1 MGRKKKKQLKPWCWYCNRDFDDEKILIQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHKE 60
MGRKKKKQLKPWCWYCNRDFDDEKILIQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHKE
Sbjct: 1 MGRKKKKQLKPWCWYCNRDFDDEKILIQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHKE 60
Query: 61 TIDAVPNAIPGRTDIELEIYGMEGIPEKDMDERRRLLEQKTQESQKKKQQDDSDEYDDDD 120
TIDAVPNAIPGRTDIELEIYGMEGIPEKDMDERRRLLEQKTQESQKKKQQDDSDEYDDDD
Sbjct: 61 TIDAVPNAIPGRTDIELEIYGMEGIPEKDMDERRRLLEQKTQESQKKKQQDDSDEYDDDD 120
Query: 121 SAASTSFQPQPVQPQQGYIPPMAQPGLPPVPGAPGMPPGIPPLMPGVPPLMPGMPPVMPG 180
SAASTSFQPQPVQPQQGYIPPMAQPGLPPVPGAPGMPPGIPPLMPGVPPLMPGMPPVMPG
Sbjct: 121 SAASTSFQPQPVQPQQGYIPPMAQPGLPPVPGAPGMPPGIPPLMPGVPPLMPGMPPVMPG 180
Query: 181 MPPG----------------MMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQA 224
MPPG MMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQA
Sbjct: 181 MPPGLHHQRKYTQSFCGENIMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQA 240
Query: 225 QAVSAPGILNRPPAPTATVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKA 284
QAVSAPGILNRPPAPTATVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKA
Sbjct: 241 QAVSAPGILNRPPAPTATVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKA 300
Query: 285 LFPSTAQAQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPA 344
LFPSTAQAQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPA
Sbjct: 301 LFPSTAQAQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPA 360
Query: 345 ASITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNPPVGPIGG 404
ASITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNPPVGPIGG
Sbjct: 361 ASITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNPPVGPIGG 420
Query: 405 MMPPQPGIPQQQGMRPPMPPHGQYGGHHQGMPGYLPGAMPPYGQGPPMVPPYQGGPPRPP 464
MMPPQPGIPQQQGMRPPMPPHGQYGGHHQGMPGYLPGAMPPYGQGPPMVPPYQGGPPRPP
Sbjct: 421 MMPPQPGIPQQQGMRPPMPPHGQYGGHHQGMPGYLPGAMPPYGQGPPMVPPYQGGPPRPP 480
Query: 465 MGMRPPVMSQGGRY 478
MGMRPPVMSQGGRY
Sbjct: 481 MGMRPPVMSQGGRY 494
>gi|73808090 zinc finger protein 207 isoform b [Homo sapiens]
Length = 463
Score = 929 bits (2401), Expect = 0.0
Identities = 445/494 (90%), Positives = 445/494 (90%), Gaps = 47/494 (9%)
Query: 1 MGRKKKKQLKPWCWYCNRDFDDEKILIQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHKE 60
MGRKKKKQLKPWCWYCNRDFDDEKILIQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHKE
Sbjct: 1 MGRKKKKQLKPWCWYCNRDFDDEKILIQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHKE 60
Query: 61 TIDAVPNAIPGRTDIELEIYGMEGIPEKDMDERRRLLEQKTQESQKKKQQDDSDEYDDDD 120
TIDAVPNAIPGRTDIELEIYGMEGIPEKDMDERRRLLEQKTQESQKKKQQDDSDEYDDDD
Sbjct: 61 TIDAVPNAIPGRTDIELEIYGMEGIPEKDMDERRRLLEQKTQESQKKKQQDDSDEYDDDD 120
Query: 121 SAASTSFQPQPVQPQQGYIPPMAQPGLPPVPGAPGMPPGIPPLMPGVPPLMPGMPPVMPG 180
SAASTSFQPQPVQPQQGYIPPMAQPGLPPVPGAPGMPPGIPPLMPGVPPLMPGMPPVMPG
Sbjct: 121 SAASTSFQPQPVQPQQGYIPPMAQPGLPPVPGAPGMPPGIPPLMPGVPPLMPGMPPVMPG 180
Query: 181 MPPG----------------MMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQA 224
MPPG MMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQA
Sbjct: 181 MPPGLHHQRKYTQSFCGENIMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQA 240
Query: 225 QAVSAPGILNRPPAPTATVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKA 284
QAVSAPGILNRPPAPTATVPAPQPPVTKPLFP
Sbjct: 241 QAVSAPGILNRPPAPTATVPAPQPPVTKPLFP---------------------------- 272
Query: 285 LFPSTAQAQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPA 344
S QAQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPA
Sbjct: 273 ---SAGQAQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPA 329
Query: 345 ASITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNPPVGPIGG 404
ASITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNPPVGPIGG
Sbjct: 330 ASITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNPPVGPIGG 389
Query: 405 MMPPQPGIPQQQGMRPPMPPHGQYGGHHQGMPGYLPGAMPPYGQGPPMVPPYQGGPPRPP 464
MMPPQPGIPQQQGMRPPMPPHGQYGGHHQGMPGYLPGAMPPYGQGPPMVPPYQGGPPRPP
Sbjct: 390 MMPPQPGIPQQQGMRPPMPPHGQYGGHHQGMPGYLPGAMPPYGQGPPMVPPYQGGPPRPP 449
Query: 465 MGMRPPVMSQGGRY 478
MGMRPPVMSQGGRY
Sbjct: 450 MGMRPPVMSQGGRY 463
>gi|160707881 formin 2 [Homo sapiens]
Length = 1722
Score = 103 bits (256), Expect = 4e-22
Identities = 119/382 (31%), Positives = 146/382 (38%), Gaps = 76/382 (19%)
Query: 129 PQPVQPQQGYIPPMAQPG-----LPPVPGAPGMPPGIPPLMPGV----PPLMPG----MP 175
P P P G PP PG LPP+PGA G+PP PP +PG PP +PG +P
Sbjct: 911 PPPPLPGAGIPPPPPLPGAGILPLPPLPGA-GIPP--PPPLPGAAIPPPPPLPGAGIPLP 967
Query: 176 PVMPGM---PPGMMPMGGMMP----PGPGIPPLMP----GMPPGMPPPVPRPGIPPMTQA 224
P +PG PP +P G+ P PG GIPP P G+PP PPP+P GIPP
Sbjct: 968 PPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPP--PPPLPGAGIPP---P 1022
Query: 225 QAVSAPGILNRPPAPTATVPAPQP------PVTKPLFPSAGQMGTPVTSSSTASSNSESL 278
+ GI PP P A +P P P P PL P AG + P L
Sbjct: 1023 PPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPL-PGAG-IPPPPPLPGAGIPPPPPL 1080
Query: 279 SASSKALFPSTAQAQAAVQGPV-GTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTN 337
+ P A P+ G P P PP P
Sbjct: 1081 PGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGAGIPPPPPL---------------- 1124
Query: 338 STAAKPAASITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAP-IGN 396
P A I P I P + P +P P P G
Sbjct: 1125 -----PGAGIPPPP------PLPGAGIPPPPPLPRVGIPPPPPLPGAGIPPPPPLPGAGI 1173
Query: 397 PPVGPIGGM-MPPQPGIPQQQGMRPPMPPHGQYGGHHQGMPGYLPGAMPPYGQGPPMVPP 455
PP P+ G+ +PP P +P G+ P PP G P LPG P PP+ PP
Sbjct: 1174 PPPPPLPGVGIPPPPPLP---GVGIPPPP--PLPGAGIPPPPPLPGMGIPPAPAPPLPPP 1228
Query: 456 YQGGPPRPPMGMR-PPVMSQGG 476
G PP P + + PP++ Q G
Sbjct: 1229 GTGIPPPPLLPVSGPPLLPQVG 1250
Score = 82.0 bits (201), Expect = 1e-15
Identities = 65/161 (40%), Positives = 78/161 (48%), Gaps = 35/161 (21%)
Query: 129 PQPVQPQQGYIPPMAQPGL-----PPVPGAPGMPPGIPPLMP--GVPPLMPGMPPVMPGM 181
P P P G PP PG PP+PGA G+PP PP +P G+PP PP +PG
Sbjct: 1109 PPPPLPGAGIPPPPPLPGAGIPPPPPLPGA-GIPP--PPPLPRVGIPP-----PPPLPGA 1160
Query: 182 ---PPGMMPMGGMMPPGP----GIPPLMP----GMPPGMPPPVPRPGIPPMTQAQAVSAP 230
PP +P G+ PP P GIPP P G+PP PPP+P GIPP P
Sbjct: 1161 GIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGVGIPP--PPPLPGAGIPP-----PPPLP 1213
Query: 231 GILNRPPAPTATVPAPQPPV-TKPLFPSAGQMGTPVTSSST 270
G + PPAP +P P + PL P +G P SST
Sbjct: 1214 G-MGIPPAPAPPLPPPGTGIPPPPLLPVSGPPLLPQVGSST 1253
Score = 77.4 bits (189), Expect = 3e-14
Identities = 103/351 (29%), Positives = 126/351 (35%), Gaps = 66/351 (18%)
Query: 143 AQPGL----PPVPGAPGMP-PGIPPLMPGVPPLMPGMPPVMPGMPPGMMPMGGMMP---- 193
+ PGL PP P PGM P +P PP + G + P PP +P G+ P
Sbjct: 869 SMPGLGMVPPPPPPLPGMTVPTLPSTAIPQPPPLQGTEMLPP--PPPPLPGAGIPPPPPL 926
Query: 194 PGPGIPPLMPGMPPGMPPPVPRPG--IPPMTQAQAVSAPGILNRPPAPTATVPAPQP--- 248
PG GI PL P G+PPP P PG IPP + GI PP P A +P P P
Sbjct: 927 PGAGILPLPPLPGAGIPPPPPLPGAAIPP---PPPLPGAGIPLPPPLPGAGIPPPPPLPG 983
Query: 249 ---PVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPV-GTDF 304
P PL P AG + P L + P A P+ G
Sbjct: 984 AGIPPPPPL-PGAG-IPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGI 1041
Query: 305 KPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSATSKLI 364
P P PP P P A I P I
Sbjct: 1042 PPPPPLPGAGIPPPPPL---------------------PGAGIPPPP------PLPGAGI 1074
Query: 365 HPDEDISLEERRAQLPKYQRNLPRPGQAP-IGNPPVGPI-GGMMPPQPGIPQQQGMRPPM 422
P + P +P P P +G PP P+ G +PP P +P G+ PP
Sbjct: 1075 PPPPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLP-GAGIPPPP 1133
Query: 423 PPHGQYGGHHQGMPGYLPGAMPPYGQGPPMVPPYQGGPPRPPM---GMRPP 470
P G G+P P +P G PP P G PP PP+ G+ PP
Sbjct: 1134 PLPG------AGIPP--PPPLPRVGIPPPPPLPGAGIPPPPPLPGAGIPPP 1176
Score = 75.1 bits (183), Expect = 1e-13
Identities = 57/144 (39%), Positives = 74/144 (51%), Gaps = 30/144 (20%)
Query: 129 PQPVQPQQGYIPPMAQPGL-----PPVPGAPGMPPGIPPLMPGV----PPLMPGMPPVMP 179
P P P+ G PP PG PP+PGA G+PP PP +PGV PP +PG+
Sbjct: 1142 PPPPLPRVGIPPPPPLPGAGIPPPPPLPGA-GIPP--PPPLPGVGIPPPPPLPGV----- 1193
Query: 180 GMPPGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRP--GIPPMTQAQAVSAPGILNRPP 237
G+PP G +PP P +P + G+PP PP+P P GIPP VS P +L P
Sbjct: 1194 GIPPPPPLPGAGIPPPPPLPGM--GIPPAPAPPLPPPGTGIPP-PPLLPVSGPPLL--PQ 1248
Query: 238 APTATVPAPQ------PPVTKPLF 255
++T+P PQ PP+ LF
Sbjct: 1249 VGSSTLPTPQVCGFLPPPLPSGLF 1272
Score = 62.4 bits (150), Expect = 9e-10
Identities = 89/334 (26%), Positives = 110/334 (32%), Gaps = 68/334 (20%)
Query: 171 MPGMPPVMPGMPPGMMPMGGMMPPGPGIPPLMPGM------------PPGM--------- 209
+P PP+ MP GM+PP P PPL PGM PP +
Sbjct: 855 IPSPPPLPCTESSSSMPGLGMVPPPP--PPL-PGMTVPTLPSTAIPQPPPLQGTEMLPPP 911
Query: 210 PPPVPRPGIPPMTQAQAVSAPGILNRPPAPTATVPAPQ--PPVTKPLFPSAGQMGTPVTS 267
PPP+P GIPP + GIL PP P A +P P P P P G P+
Sbjct: 912 PPPLPGAGIPP---PPPLPGAGILPLPPLPGAGIPPPPPLPGAAIPPPPPLPGAGIPLPP 968
Query: 268 SSTASSNSESLSASSKALFPSTAQAQAAVQGP---VGTDFKPLNSTPATTTEPPKPTFPA 324
+ + P A + P G P P PP P
Sbjct: 969 PLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPL--- 1025
Query: 325 YTQSTASTTSTTNSTAAKPAASITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQR 384
P A I P I P + P
Sbjct: 1026 ------------------PGAGIPPPP------PLPGAGIPPPPPLPGAGIPPPPPLPGA 1061
Query: 385 NLPRPGQAP-IGNPPVGPI-GGMMPPQPGIPQQQGMRPPMPPHGQYGGHHQGMPGY-LPG 441
+P P P G PP P+ G +PP P +P G+ PP P G +PG +P
Sbjct: 1062 GIPPPPPLPGAGIPPPPPLPGAGIPPPPPLP-GAGIPPPPPLPGVGIPPPPPLPGAGIPP 1120
Query: 442 AMPPYGQGPPMVPPYQGG-----PPRPPMGMRPP 470
P G G P PP G PP P +G+ PP
Sbjct: 1121 PPPLPGAGIPPPPPLPGAGIPPPPPLPRVGIPPP 1154
Score = 53.1 bits (126), Expect = 5e-07
Identities = 77/291 (26%), Positives = 106/291 (36%), Gaps = 43/291 (14%)
Query: 198 IPPL--MPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILN---RPPAPTATVPAPQPPVTK 252
+PP+ +PG PP P P ++ + +P ++ PT ++ P PP +
Sbjct: 757 LPPVDGLPGRPPCPPGAESGPQTKFCSEISLIVSPRRISVQLDSHQPTQSISQPPPPPSL 816
Query: 253 PLFPSAGQMGT-PVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPVGTDFKPLNSTP 311
GQ G+ P S ST S S SS F ++ + P + +S P
Sbjct: 817 LWSAGQGQPGSQPPHSISTEFQTSHEHSVSSA--FKNSCNIPSPPPLPCT---ESSSSMP 871
Query: 312 AT-TTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSATSKLIHPDEDI 370
PP P P T T +T+ + + P L P I
Sbjct: 872 GLGMVPPPPPPLPGMTVPTLPSTAIPQPPPLQGTEMLPPPPPPLPGAGIPPPPPLPGAGI 931
Query: 371 SLEERRAQLPKYQRNLPRPGQAPIGNPPVGPI-GGMMPPQPGIPQQQGMRPPMPPHGQYG 429
LP P G PP P+ G +PP P +P G P+PP
Sbjct: 932 ---------------LPLPPLPGAGIPPPPPLPGAAIPPPPPLP---GAGIPLPPPLPGA 973
Query: 430 GHHQGMPGYLPGA-MPPY----GQGPPMVPPYQGG--PPRPPM---GMRPP 470
G P LPGA +PP G G P PP G PP PP+ G+ PP
Sbjct: 974 GIPPPPP--LPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPP 1022
Score = 43.5 bits (101), Expect = 4e-04
Identities = 33/96 (34%), Positives = 41/96 (42%), Gaps = 18/96 (18%)
Query: 129 PQPVQPQQGYIPPMAQPGL--PPVPGAPGMPPGI----PPLMP-GVPPLMPGM------- 174
P P P G PP PG+ PP P P PPG PPL+P PPL+P +
Sbjct: 1197 PPPPLPGAGIPPPPPLPGMGIPPAPAPPLPPPGTGIPPPPLLPVSGPPLLPQVGSSTLPT 1256
Query: 175 PPVM----PGMPPGMMPMGGMMPPGPGIPPLMPGMP 206
P V P +P G+ +G G P+ P P
Sbjct: 1257 PQVCGFLPPPLPSGLFGLGMNQDKGSRKQPIEPCRP 1292
Score = 33.1 bits (74), Expect = 0.57
Identities = 64/287 (22%), Positives = 94/287 (32%), Gaps = 75/287 (26%)
Query: 76 ELEIYGMEGIPEK-----DMDERRRLLEQKTQESQKKKQQDDSDEY---DDDDSAASTSF 127
+ +IY E+ D+ + RL +Q+ Q+ Q + QQ + ++ +A T+
Sbjct: 180 DTDIYSFHSATEQEDLLSDIQQAIRLQQQQQQQLQLQLQQQQQQQQLQGAEEPAAPPTAV 239
Query: 128 QPQP-----------------------------------------VQPQQGYIPPMAQPG 146
PQP +P++ PP PG
Sbjct: 240 SPQPGAFLGLDRFLLGPSGGAGEAPGSPDTEQALSALSDLPESLAAEPREPQQPP--SPG 297
Query: 147 LPPVPGAPGMPPGIPPLMPGVPPLMPGMPPVMPGMPPGMMPMGGMMPPG-PGIPPLMPGM 205
PV AP +P P P PG P+ G G
Sbjct: 298 GLPVSEAPSLPAAQPAAKDSPSSTAFPFPEAGPGEEAAGAPVRGAGDTDEEGEEDAFEDA 357
Query: 206 PPGMP-----PPV-----PRPGIPPMTQAQAVSAPGILNRP--PAPTATVPAPQPPVTKP 253
P G P P V R G P +AQ AP + P PAP+ P P +T P
Sbjct: 358 PRGSPGEEWAPEVGEDAPQRLGEEPEEEAQGPDAPAAASLPGSPAPSQRCFKPYPLIT-P 416
Query: 254 LF--PSAGQMGTPVTSSSTASSNS--------ESLSASSKALFPSTA 290
+ + Q+ +P S S + + S SLS S+ S A
Sbjct: 417 CYIKTTTRQLSSPNHSPSQSPNQSPRIKRRPEPSLSRGSRTALASVA 463
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 102 bits (253), Expect = 1e-21
Identities = 113/378 (29%), Positives = 129/378 (34%), Gaps = 58/378 (15%)
Query: 128 QPQPVQPQQGYIPPMAQPGLPPVPGAPGMPP---GIPPLMPGVPPLMPGMPPV------- 177
+PQ PQ G P G PP PG P PP G P P P G PP
Sbjct: 56 KPQGPPPQGGNQPQ----GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSP 111
Query: 178 --MPGMPPGMMPMGGMMPPGPGIPPLMPGMPP--------GMPPPVPRPGIPPMTQAQAV 227
PG P G P GG P GP PP P PP G PPP G PP ++
Sbjct: 112 RSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSR 171
Query: 228 SA---PGILNRPPAPTATVP-APQPPVTKPLFPSAGQMGTPV-------TSSSTASSNSE 276
S+ PG PP P P PP KP P P +++
Sbjct: 172 SSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNK 231
Query: 277 SLSASSKALFPSTAQAQAA--VQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTS 334
S SA S P Q QGP KP P +P P P Q
Sbjct: 232 SQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGG 291
Query: 335 TTNSTAAKPAASITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPI 394
+ + ++ P P P + K Q P+ G P
Sbjct: 292 SKSRSSRSPPGKPQGPP--------------PQGGNQPQGPPPPPGKPQGPPPQGGNKPQ 337
Query: 395 GNPPVGPIGGMMPPQPGIPQQQGMRPPMPPHG---QYGGHHQGMPGYLPGAMPPYGQGPP 451
G PP G G PPQ G + PP P G Q G + QG P G P Q PP
Sbjct: 338 GPPPPGKPQGP-PPQGGSKSRSARSPPGKPQGPPQQEGNNPQGPPPPA-GGNPQQPQAPP 395
Query: 452 MVPPYQGGPPRPPMGMRP 469
P GPPRPP G RP
Sbjct: 396 AGQPQ--GPPRPPQGGRP 411
Score = 91.7 bits (226), Expect = 1e-18
Identities = 104/369 (28%), Positives = 122/369 (33%), Gaps = 50/369 (13%)
Query: 110 QDDSDEYDDDDSAASTSFQPQPVQPQQGYIPPMAQPGLPPVPGAPGMPPGIPPLMPGVPP 169
Q+ +++ ++S + + PQ PQ G P P PPG P P
Sbjct: 17 QNLNEDVSQEESPSLIAGNPQGAPPQGGNKPQ-----------GPPSPPGKPQGPPPQGG 65
Query: 170 LMPGMPPVMPGMPPGMMPMGGMMPPGPGIPPLMPGMPPGMPP-------PVPRPGIPPMT 222
P PP PG P G P GG P GP PP PG P G PP P PG P
Sbjct: 66 NQPQGPPPPPGKPQGPPPQGGNKPQGP--PP--PGKPQGPPPQGDKSRSPRSPPGKPQGP 121
Query: 223 QAQAVSAPGILNRPPAPTATVPAPQPP-VTKPLF-PSAGQMGTPVTSSSTASSNSESLSA 280
Q + P PP P P P KP P G+ P S +S S
Sbjct: 122 PPQGGNQP---QGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSRSSRSPPG 178
Query: 281 SSKALFPSTAQAQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTA 340
+ P Q QGP KP P +P P P Q + +A
Sbjct: 179 KPQGPPP---QGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSQSA 235
Query: 341 AKPAASITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNPPVG 400
P P P + K Q P+ G P G PP G
Sbjct: 236 RSPPGKPQGPP--------------PQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPG 281
Query: 401 PIGGMMPPQPGIPQQQGMRPPMPPHG---QYGGHHQG--MPGYLPGAMPPYGQGPPMVPP 455
G PPQ G + PP P G Q G QG P P PP G P PP
Sbjct: 282 KPQG-PPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPP 340
Query: 456 YQGGPPRPP 464
G P PP
Sbjct: 341 PPGKPQGPP 349
Score = 64.3 bits (155), Expect = 2e-10
Identities = 77/302 (25%), Positives = 86/302 (28%), Gaps = 59/302 (19%)
Query: 175 PPVMPGMPPGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILN 234
P ++ G P G P GG P GP PP P PP P+ PP PG
Sbjct: 29 PSLIAGNPQGAPPQGGNKPQGPPSPPGKPQGPPPQGGNQPQGPPPP---------PGKPQ 79
Query: 235 RPPAPTATVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKALFPSTAQAQA 294
PP P PP KP G P + S S K P Q
Sbjct: 80 GPPPQGGNKPQGPPPPGKP-------QGPPPQGDKSRSPRSPP----GKPQGPPP-QGGN 127
Query: 295 AVQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATL 354
QGP KP P +P P P Q + ++ P P
Sbjct: 128 QPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPP-- 185
Query: 355 TTTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNPPVGPIGGMMPPQPGIPQ 414
Q + P P P G PP G PP PG PQ
Sbjct: 186 -----------------------QGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQ 222
Query: 415 QQGMRPPMPPHGQYGGHHQGMPGYLPGAMPPYGQGPPMVPPYQGGPPRPPMGMRPPVMSQ 474
PP G P P PP G P PP PP G Q
Sbjct: 223 GP------PPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPP-------PPPGKPQGPPPQ 269
Query: 475 GG 476
GG
Sbjct: 270 GG 271
Score = 62.8 bits (151), Expect = 7e-10
Identities = 58/170 (34%), Positives = 63/170 (37%), Gaps = 27/170 (15%)
Query: 121 SAASTSFQPQPVQPQQGYIPPMAQPGLPPVPGAPGMPPGIPPLMPGVPPLMPGMPP---- 176
SA S +PQ PQ G P P P P P G P P P G PP
Sbjct: 234 SARSPPGKPQGPPPQGGN-QPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGS 292
Query: 177 ------VMPGMPPGMMPMGGMMPPGPGIPPLMPGMPP--------GMPPPVPRPGIPPMT 222
PG P G P GG P GP PP P PP G PPP G PP
Sbjct: 293 KSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQG 352
Query: 223 QAQAVSA---PGILNRPPAPTATVP-APQPPV----TKPLFPSAGQMGTP 264
+++ SA PG PP P P PP +P P AGQ P
Sbjct: 353 GSKSRSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQGP 402
Score = 47.0 bits (110), Expect = 4e-05
Identities = 41/120 (34%), Positives = 44/120 (36%), Gaps = 20/120 (16%)
Query: 121 SAASTSFQPQPVQPQ-----QGYIPPMAQPGLPPVPGA--------PGMPPGIPPL---- 163
S+ S +PQ PQ QG PP +P PP G PG P G PP
Sbjct: 296 SSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSK 355
Query: 164 --MPGVPPLMPGMPPVMPGM-PPGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPP 220
PP P PP G P G P G P P PP P PP RP PP
Sbjct: 356 SRSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQGPPRPPQGGRPSRPP 415
Score = 44.3 bits (103), Expect = 2e-04
Identities = 45/136 (33%), Positives = 54/136 (39%), Gaps = 18/136 (13%)
Query: 359 ATSKLIHPDEDISLEERRAQL-------PKYQRNLPRPGQAPIGNPP-VGPIGGMMP--- 407
A S + +ED+S EE + + P N P+ +P G P P GG P
Sbjct: 12 ALSSAQNLNEDVSQEESPSLIAGNPQGAPPQGGNKPQGPPSPPGKPQGPPPQGGNQPQGP 71
Query: 408 -PQPGIPQ----QQGMRP--PMPPHGQYGGHHQGMPGYLPGAMPPYGQGPPMVPPYQGGP 460
P PG PQ Q G +P P PP G QG P + P QGPP Q
Sbjct: 72 PPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQG 131
Query: 461 PRPPMGMRPPVMSQGG 476
P PP G QGG
Sbjct: 132 PPPPPGKPQGPPPQGG 147
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 96.3 bits (238), Expect = 5e-20
Identities = 101/372 (27%), Positives = 125/372 (33%), Gaps = 45/372 (12%)
Query: 123 ASTSFQPQPVQPQQGYIPPMAQPGLPPVPGAPGMPPGIPPLMPGVP--PLMPGMPPVMPG 180
AS S + P P P P P AP P PP G P P G P
Sbjct: 932 ASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAA 991
Query: 181 MPPGMMPMGGMMPPGPGIPPLMPGMPP----GMPPPVPRP--------GIPPMTQAQAVS 228
PP P GG P P P P + P G P P P PP + +
Sbjct: 992 TPPS--PKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAA 1049
Query: 229 APGILNRPPAPTATVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKALFPS 288
P P P AT+P+P+ P PS TP ++ + + + A P
Sbjct: 1050 TPLPKGAPTTPAATLPSPKGG---PATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPP 1106
Query: 289 TAQAQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASIT 348
A + G K +TPA T PP P T +T +T P +
Sbjct: 1107 AATPPSPKGGLATPPHKGAPTTPAAT--PPSPKGGLATPPPKGAPTTPAATPPSPKGGLA 1164
Query: 349 SKP--ATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPI--GNPPVGPIGG 404
+ P TT +AT PK P P AP P P GG
Sbjct: 1165 TPPPKGAPTTPAAT----------------PPSPKGGLATPSPKGAPTTPAATPPSPKGG 1208
Query: 405 MMPPQP-GIPQQQGMRPPMPPHGQYGGHHQGMPGYLPGAMPPYGQGPPMVPPYQGGPPRP 463
+ P P G P PP P G +G P P A PP +G P PP +G P
Sbjct: 1209 LATPSPKGAPTTPAATPPSPKGGLATPSPKGAP-TTPAATPPSPKGGPATPPPKGAP--T 1265
Query: 464 PMGMRPPVMSQG 475
P PP + G
Sbjct: 1266 PPAATPPSLKGG 1277
Score = 92.4 bits (228), Expect = 8e-19
Identities = 104/376 (27%), Positives = 124/376 (32%), Gaps = 44/376 (11%)
Query: 131 PVQPQQGYIPPMAQPGLPPVPGAPGMPPGIPPLMPGVPPL-----MPGMPPVMPGMPPGM 185
P P P P P GAP P PP G P P P V P P G
Sbjct: 963 PTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGS 1022
Query: 186 MPMGGMMPPGPGIPPLM-PGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTATVP 244
P P G PP P P G P P P P T A + +P PA +
Sbjct: 1023 -PAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSP---KGGPATPSLKG 1078
Query: 245 APQPPVTKPLFPSAGQM-----GTPVTSSSTASSNSESLSA-------SSKALFPSTAQA 292
AP PP P P G G P+ ++T S L+ ++ A P + +
Sbjct: 1079 APTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKG 1138
Query: 293 QAAVQGPVGTDFKPLNSTPAT----TTEPPK--PTFPAYTQSTAS---TTSTTNSTAAKP 343
A P G P + P+ T PPK PT PA T + T + P
Sbjct: 1139 GLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTP 1198
Query: 344 AASITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPI---GNPPVG 400
AA+ S L T S P PK P P AP PP
Sbjct: 1199 AATPPSPKGGLATPSPKGAPTTP-------AATPPSPKGGLATPSPKGAPTTPAATPPSP 1251
Query: 401 PIGGMMPPQPGIPQQQGMRPPMPPHGQYGGHHQGMPGYLPGAM-PPYGQGPPMVPPYQGG 459
G PP G P PP G H+G P P + PP +G P P +G
Sbjct: 1252 KGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPN--PAVVTPPSPKGGPATSPPKGA 1309
Query: 460 PPRPPMGMRPPVMSQG 475
P P P S G
Sbjct: 1310 PTPPAATPPSPKGSPG 1325
Score = 88.2 bits (217), Expect = 1e-17
Identities = 93/349 (26%), Positives = 114/349 (32%), Gaps = 73/349 (20%)
Query: 131 PVQPQQGYIPPMAQPGLPPVPGAPGMPPGIPPLMPGVP--PLMPGMPPVMPGMPPGMMPM 188
P P P P P + GAP P PP G P P G P PP P
Sbjct: 1057 PTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPS--PK 1114
Query: 189 GGMM-PPGPGIPPLMPGMPP----GMPPPVPRPGIPPMTQAQAVSAP--GILNRPPAPTA 241
GG+ PP G P PP G+ P P+ P T A +P G+ PP
Sbjct: 1115 GGLATPPHKGAPTTPAATPPSPKGGLATPPPKGA--PTTPAATPPSPKGGLATPPPKGAP 1172
Query: 242 TVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPVG 301
T PA PP K + G P T ++T P + + A P G
Sbjct: 1173 TTPAATPPSPKGGLATPSPKGAPTTPAAT----------------PPSPKGGLATPSPKG 1216
Query: 302 TDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSATS 361
+TPA T PP P T S +T +T P + P
Sbjct: 1217 AP-----TTPAAT--PPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPP---------- 1259
Query: 362 KLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNPPVGPIGGMMPPQPGIPQQQGMRPP 421
+ P P P PP G PP G P + PP
Sbjct: 1260 ---------------------PKGAPTP---PAATPPSLKGGLATPPHKGAPNPAVVTPP 1295
Query: 422 MPPHGQYGGHHQGMPGYLPGAMPPYGQGPPMVPPYQGGPPRPPMGMRPP 470
P G +G P P A PP +G P PP +G P P + PP
Sbjct: 1296 SPKGGPATSPPKGAP-TPPAATPPSPKGSPGTPPPKGAP--TPPAVTPP 1341
Score = 79.0 bits (193), Expect = 9e-15
Identities = 93/364 (25%), Positives = 112/364 (30%), Gaps = 38/364 (10%)
Query: 121 SAASTSFQPQPVQPQQGY--IPPMAQPGLPPVPGAPGMPPGIPPLMPGVPPLMPGMPPVM 178
S SF P+ QG P PP P P + PL P L P P
Sbjct: 829 SPVEASFLPENSLSFQGSKDSPATTHSPTPPSPKGAPTPSAVTPLSPKGVTLPPKETPT- 887
Query: 179 PGMPPGMMPMGGMMPPGPGIPPLM---------------PGMPPGMPPPVPRPGIPPMTQ 223
P + P G P P P + P P P P P P T
Sbjct: 888 PSVVNLPFPKEGPATPAPKQAPALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATP 947
Query: 224 AQAVSAPGILNRPPAPTATVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSK 283
P + APT P P P PS TP ++ + + +
Sbjct: 948 PSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKG 1007
Query: 284 ALFPSTAQAQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKP 343
A P + P T F STP T P PA T +T +T P
Sbjct: 1008 APTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSP 1067
Query: 344 AASITSKPATLTTTSA-TSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPI--GNPPVG 400
PAT + A T P PK P P AP+ P
Sbjct: 1068 KGG----PATPSLKGAPTPPAATPPS-----------PKGGPATPSPKGAPMPPAATPPS 1112
Query: 401 PIGGM-MPPQPGIPQQQGMRPPMPPHGQYGGHHQGMPGYLPGAMPPYGQGPPMVPPYQGG 459
P GG+ PP G P PP P G +G P P A PP +G PP +G
Sbjct: 1113 PKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAP-TTPAATPPSPKGGLATPPPKGA 1171
Query: 460 PPRP 463
P P
Sbjct: 1172 PTTP 1175
Score = 72.0 bits (175), Expect = 1e-12
Identities = 96/371 (25%), Positives = 121/371 (32%), Gaps = 61/371 (16%)
Query: 140 PPMAQPGL--PPVPGAPGMPPGIPPLMPG--VPPLMPGMPPVMPGMPPGMMPMGGMMPP- 194
PP + GL P GAP P PP G P G P PP P GG+ P
Sbjct: 1179 PPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPS--PKGGLATPS 1236
Query: 195 ---GPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTATVPAPQPPVT 251
P P P P G P P G P A S G L PP AP P V
Sbjct: 1237 PKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHK----GAPNPAVV 1292
Query: 252 KPLFPSAGQMGTPVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPVGTDFKPLNSTP 311
P P G P TS + + + S P T + A + P
Sbjct: 1293 TPPSPKGG----PATSPPKGAPTPPAATPPSPKGSPGTPPPKGA------------PTPP 1336
Query: 312 ATTTEPPK--PTFPAYTQST--ASTTSTTNSTAAKPAASITSKPATLTTTSATSK---LI 364
A T PK PT PA T S+ TT ++ PAA+ + K T + + +
Sbjct: 1337 AVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIP 1396
Query: 365 HPDED------ISLEERRA-QLPKYQRNLPRPGQAPIGNPPVGPI-------------GG 404
P D I L ++A P + P + + P V P+ G
Sbjct: 1397 SPKGDPTSPAVIPLSPKKAPATPVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGP 1456
Query: 405 MMPPQPGIPQQQGMRPPMP--PHGQYGGHHQGMPGYLPGAMPPYGQG--PPMVPPYQGGP 460
P G P + PP P P P P P G P ++P
Sbjct: 1457 ATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEV 1516
Query: 461 PRPPMGMRPPV 471
P P R P+
Sbjct: 1517 PATPSSRRDPI 1527
Score = 68.9 bits (167), Expect = 9e-12
Identities = 103/414 (24%), Positives = 134/414 (32%), Gaps = 75/414 (18%)
Query: 123 ASTSFQPQPVQPQQGYIPPMAQPGLPPVPGAPGMPPGIPPLMPG---VPPLMPG------ 173
A+ S + P P P P PP GAP P PP + G PP
Sbjct: 1233 ATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVV 1292
Query: 174 MPPVMPGMPPGMMPMGGMMPPG--PGIPPLMPGMPP--GMP-PPVPRPGIPPMTQAQAVS 228
PP G P P G PP P P PG PP G P PP P P T +
Sbjct: 1293 TPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPAT 1352
Query: 229 APGILNRPPAPTATVPAPQPPVTKP-------LFPSAGQMGTPVTSSSTASSNSESLSAS 281
P P P++ P PP P + P + + G P S S ++
Sbjct: 1353 TPSSKGGPTTPSSK-EGPTPPAATPSHKGGPAMTPPSPKRG-PAIPSPKGDPTSPAVIPL 1410
Query: 282 SKALFPSTAQAQAAVQGPVGTDFKPLNSTP-----ATTTEPPK-----------PTFPAY 325
S P+T + P D P TP A T PK PT PA
Sbjct: 1411 SPKKAPATPVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAV 1470
Query: 326 TQST---------ASTTSTTNSTAAKPA--------ASITSKPATLTTT--------SAT 360
T + +T+S+ A PA A I S P + T + T
Sbjct: 1471 TPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPT 1530
Query: 361 SKLIHPDEDISLEERRAQLPKYQRNLPRPGQAP-IGNP---PVGPIGGMMPPQPGIPQQQ 416
+ L+ +L + A +P +P P + P I P P P P +
Sbjct: 1531 ATLLSKKTPATLAPKEALIPP-AMTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPST 1589
Query: 417 GMRPPMP-----PHGQYGGHHQGMPGYLPGAMPPYGQGPPMVPPYQGGPPRPPM 465
P P P + P P PP + P P +G P PP+
Sbjct: 1590 YKGAPSPKELLIPPAVTSPSPKEAP-TPPAVTPPSPEKGPATPAPKGTPTSPPV 1642
Score = 61.6 bits (148), Expect = 1e-09
Identities = 85/356 (23%), Positives = 130/356 (36%), Gaps = 26/356 (7%)
Query: 129 PQPVQPQQGYIPPMAQ-------PGLPPVPGAPGMPPGIPPLMPGV--PPLMPGMP-PVM 178
P + P++ IPP P +P AP P P P G P P
Sbjct: 1539 PATLAPKEALIPPAMTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKE 1598
Query: 179 PGMPPGMM-PMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPP 237
+PP + P P P + P P P P P P PP+T + +P P
Sbjct: 1599 LLIPPAVTSPSPKEAPTPPAVTPPSPEKGPATPAPKGTPTSPPVTPSSLKDSP---TSPA 1655
Query: 238 APTATVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKALFPSTAQAQAAVQ 297
+ T + A P +K L G + A ++ ++A ++ P T ++ +A
Sbjct: 1656 SVTCKMGATVPQASKGLPAKKGPTALKEVLVAPAPESTPIITAPTRK-GPQTKKS-SATS 1713
Query: 298 GPVGTDFKPLN-STPATTTEPPKPTFPAYTQSTASTTSTTNSTAAK-PAASITSKPATLT 355
P+ D N S +T P P P S+ + S + K P A SK +T
Sbjct: 1714 PPICPDPSAKNGSKGPLSTVAPAPLLPVQKDSSKTAKGKDASHSPKGPLAPPESKASTPL 1773
Query: 356 TTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNPPVGPIGGMMPPQPGIPQQ 415
T +A K++ E S+ + P +LP AP P + P +P PG+ +
Sbjct: 1774 TAAAFEKVLPKPESASV----SAAPSPPVSLP---LAPSPVPTLPPKQQFLPSSPGLVLE 1826
Query: 416 QGMRPPMPPHGQYGGHHQGMPGYLPGAMPPYGQGPPMVPPYQGGPPRPPMGMRPPV 471
+ P+ P + P + G +P M P G P P + PV
Sbjct: 1827 SPSK-PLAPADEDELLPLIPPEPISGGVPFQSVLVNMPTPKSAGIPVPTPSAKQPV 1881
Score = 57.4 bits (137), Expect = 3e-08
Identities = 77/300 (25%), Positives = 101/300 (33%), Gaps = 45/300 (15%)
Query: 200 PLMPGMPPGMP-PPVPRPGIPPMTQAQAVSAPGILNRPPAPTATVPAPQPPVTK------ 252
PL+P P P P+ P+ A V AP I P+P+ PA PP TK
Sbjct: 699 PLVPTASENCPVAPSPQNTCAPL--ATLVLAPEIPKSVPSPSLP-PAGTPPGTKKVDGIS 755
Query: 253 ---PLFPSAGQMGTPVTSSSTASSNSES---------------LSASSKALFPSTAQAQA 294
L P A T S AS+ + S +S S + P T + A
Sbjct: 756 HTSALAPVASSPKECPTEDSGASATASSKGTLTYLADSPSPLGVSVSPQTKRPPTKKGSA 815
Query: 295 AVQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATL 354
P+G P++ A+ +F S A+T S T P+ P+ +
Sbjct: 816 GPDTPIGNLSSPVSPVEASFLPENSLSFQGSKDSPATTHSPT-----PPSPKGAPTPSAV 870
Query: 355 TTTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPI----------GNPPVGPIGG 404
T S + P E + PK P P QAP P G
Sbjct: 871 TPLSPKGVTLPPKETPTPSVVNLPFPKEGPATPAPKQAPALSMTSSSPKKARATPAPKGI 930
Query: 405 MMPPQP-GIPQQQGMRPPMPPHGQYGGHHQGMPGYLPGAMPPYGQGPPMVPPYQGGPPRP 463
P P G P PP P G + P P A PP +G P P +G P P
Sbjct: 931 PASPSPKGAPTPPAATPPSPKGGPATPSPKWAP-TPPAATPPSPKGGPATPSPKGAPTPP 989
Score = 57.4 bits (137), Expect = 3e-08
Identities = 83/336 (24%), Positives = 114/336 (33%), Gaps = 42/336 (12%)
Query: 156 MPPGIPPLMPGVPPLMPGMPPVMPGMPPGMMPMGGM-----MPPGPGIPPLMPGMPPGMP 210
+ P IP +P P +PP G PPG + G+ + P P P G
Sbjct: 726 LAPEIPKSVPS-----PSLPPA--GTPPGTKKVDGISHTSALAPVASSPKECPTEDSGAS 778
Query: 211 PPVPRPG----IPPMTQAQAVSAPGILNRPPAPTATVPAPQPPV---TKPLFPSAGQMGT 263
G + VS RPP + P P+ + P+ P
Sbjct: 779 ATASSKGTLTYLADSPSPLGVSVSPQTKRPPTKKGSA-GPDTPIGNLSSPVSPVEASFLP 837
Query: 264 PVTSSSTASSNSESLSASSKALFPSTAQAQAAVQ--GPVGTDFKPLNS-TPATTTEP-PK 319
+ S S +S + + S P A +AV P G P + TP+ P PK
Sbjct: 838 ENSLSFQGSKDSPATTHSPTPPSPKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPK 897
Query: 320 --PTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSA-TSKLIHPDEDISLEERR 376
P PA Q+ A + ++++ A+ + PA+ + A T P
Sbjct: 898 EGPATPAPKQAPALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPS-------- 949
Query: 377 AQLPKYQRNLPRPGQAPI--GNPPVGPIGGMMPPQP-GIPQQQGMRPPMPPHGQYGGHHQ 433
PK P P AP P P GG P P G P PP P G +
Sbjct: 950 ---PKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPK 1006
Query: 434 GMPGYLPGAMPPYGQGPPMVPPYQGGPPRPPMGMRP 469
G P P PP +G P P+ G PP P
Sbjct: 1007 GAP-TPPAVTPPSPKGSPAATPFPKGASTPPAATPP 1041
Score = 43.5 bits (101), Expect = 4e-04
Identities = 55/247 (22%), Positives = 95/247 (38%), Gaps = 26/247 (10%)
Query: 142 MAQPGLPPVPGAPGMPPGIPPLMPGVPPLMPGMPPVMPGMPPGMMPMGGMMPPGPGIPPL 201
+ +P V AP PP PL P P +P +P P G++ P PL
Sbjct: 1782 LPKPESASVSAAPS-PPVSLPLAPSPVPTLPPKQQFLPSSP-------GLVLESPS-KPL 1832
Query: 202 MPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTATVPAPQPPVTKPLFPSAGQM 261
P + P +P I Q+V ++N P +A +P P P +P+ +
Sbjct: 1833 APADEDELLPLIPPEPISGGVPFQSV----LVNMPTPKSAGIPVPTPSAKQPVTKNNKGS 1888
Query: 262 GTPVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPVGTDFKPLNSTPATTTEPPKPT 321
GT S + E S + +T QAQ A + D +P++ + +E K
Sbjct: 1889 GTESDSDESVPELEEQDSTQA-----TTQQAQLAAAAEI--DEEPVSKAKQSRSE-KKAR 1940
Query: 322 FPAYTQSTASTTSTTNST--AAKPAASITSKPATLTTTSATSKLIHPD---EDISLEERR 376
T T T +K + +KP + ++ + ++ + ED+S + +
Sbjct: 1941 KAMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQL 2000
Query: 377 AQLPKYQ 383
A K++
Sbjct: 2001 AAAEKFK 2007
Score = 41.2 bits (95), Expect = 0.002
Identities = 56/279 (20%), Positives = 96/279 (34%), Gaps = 33/279 (11%)
Query: 141 PMAQPGLPPVPGAPGMPPGIPPLMPGVPPLMPGMPPVMPGMPPGMMPMGGMMPPGPGIPP 200
P A P P P +P PPL P + +P ++ +P
Sbjct: 480 PAALVMAPVAPKEPSTQVATTLRIPVSPPLPD--PEDLKNLPSSVLVKFPTQKDLQTVPA 537
Query: 201 LMPGMP--PGMPPPVPR--PGIPPMTQAQAVSAPGILNRPPAPTATVPAPQPPVTKPLFP 256
+ G P P + P + P+ QA ++P +T +P+ P++
Sbjct: 538 SLEGAPFSPAQAGLTTKKDPTVLPLVQAAPKNSPSF-------QSTSSSPEIPLSPEATL 590
Query: 257 SAGQMGTPVTSSSTASSNSESLSASSKA-LFPSTAQAQAAVQGPVGTDFKPLNSTPATTT 315
+ +G P+ ASS + L +S A + + + A GP+ K TP
Sbjct: 591 AKKSLGEPLPIGKPASSMTSPLGVNSSASVIKTDSYAGPDSAGPL---LKSSLITPTVAA 647
Query: 316 EPPKPTFPAYTQSTASTTSTTNSTAAKP----------------AASITSKPATLTTTSA 359
P + PA T + ++T +T A P ++T+ P T +
Sbjct: 648 FPLESADPAGVAPTTAKGTSTYTTTASPFLEGTVSLAPKNHPVKEGTLTTLPLVPTASEN 707
Query: 360 TSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNPP 398
P + P+ +++P P P G PP
Sbjct: 708 CPVAPSPQNTCAPLATLVLAPEIPKSVPSPSLPPAGTPP 746
Score = 40.8 bits (94), Expect = 0.003
Identities = 59/241 (24%), Positives = 82/241 (34%), Gaps = 29/241 (12%)
Query: 123 ASTSFQPQPVQPQQGYIPPMAQ--PGLPPVPGAPGMPPGIPPLMPGVPPLMPGMPPVMPG 180
A TS P+ PP + P P G P PP P + P P G
Sbjct: 1604 AVTSPSPKEAPTPPAVTPPSPEKGPATPAPKGTPTSPPVTPSSLKD-SPTSPASVTCKMG 1662
Query: 181 MPPGMMPMGGMMPPGP-GIPPLMPGMPPGMPPPVPRPGIP-PMTQAQAVSAPGILNRPPA 238
G GP + ++ P P + P P T+ + ++P I P A
Sbjct: 1663 ATVPQASKGLPAKKGPTALKEVLVAPAPESTPIITAPTRKGPQTKKSSATSPPICPDPSA 1722
Query: 239 ------PTATV-PAPQPPVTKPLFPSA-GQMGTPVTSSSTASSNSESLSASSKALF---- 286
P +TV PAP PV K +A G+ + A S++ + + A F
Sbjct: 1723 KNGSKGPLSTVAPAPLLPVQKDSSKTAKGKDASHSPKGPLAPPESKASTPLTAAAFEKVL 1782
Query: 287 --PSTAQAQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPA 344
P +A AA PV P P PT P Q S+ + +KP
Sbjct: 1783 PKPESASVSAAPSPPVSLPLAP----------SPVPTLPPKQQFLPSSPGLVLESPSKPL 1832
Query: 345 A 345
A
Sbjct: 1833 A 1833
Score = 36.6 bits (83), Expect = 0.052
Identities = 54/207 (26%), Positives = 79/207 (38%), Gaps = 19/207 (9%)
Query: 202 MPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTATVPAPQPPVTKPLFPSAGQM 261
+P +P P + PM+ A +V+A P P PAPQ PL SA
Sbjct: 9 VPATEQELPQPQAETAVLPMSSALSVTAALGQPGPTLPPPCSPAPQ---QCPL--SAANQ 63
Query: 262 GTPVTSSSTASSNSESL----SASSKALFPSTA-QAQAAVQGPVGTDFKP----LNSTPA 312
+P S ST +S + S+S AL TA +A + +G P L S
Sbjct: 64 ASPFPSPSTIASTPLEVPFPQSSSGTALPLGTAPEAPTFLPNLIGPPISPAALALASPMI 123
Query: 313 TTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSATSKLIHPDEDISL 372
T P+ A A + ++A P +TS P+ S + +I I+
Sbjct: 124 APTLKGTPSSSAPLALVALAPHSVQKSSAFPPNLLTSPPSVAVAESGS--VITLSAPIAP 181
Query: 373 EERRAQLPKYQRN-LPRPGQAPIGNPP 398
E + L K +P P P +PP
Sbjct: 182 SEPKTNLNKVPSEVVPNPKGTP--SPP 206
Score = 35.4 bits (80), Expect = 0.11
Identities = 62/303 (20%), Positives = 101/303 (33%), Gaps = 30/303 (9%)
Query: 141 PMAQPGLPPVPGAPGMPPGIPPLMPGVPPLMPGMPPVMPGMPPGMMPMGGMMPPGPGIPP 200
P+ P P +P G P P P + G PP+ P PM I P
Sbjct: 77 PLEVP-FPQSSSGTALPLGTAPEAPTFLPNLIG-PPISPAALALASPM---------IAP 125
Query: 201 LMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTATVPAPQPPVTKPLFPSAGQ 260
+ G P P P Q + P +L PP+ ++ P+ PS +
Sbjct: 126 TLKGTPSSSAPLALVALAPHSVQKSSAFPPNLLTSPPSVAVAESGSVITLSAPIAPSEPK 185
Query: 261 MGTPVTSSSTASS--NSESLSASSKALFPSTAQAQAAVQGPVGTDFKPLNSTPATTTEPP 318
S + + S + A++Q V + +TP TT
Sbjct: 186 TNLNKVPSEVVPNPKGTPSPPCIVSTVPYHCVTPMASIQSGVAS---LPQTTPTTTLAIA 242
Query: 319 KP-----TFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSATSKL----IHPDED 369
P T + S + S + P A+++ +L +++ K PD
Sbjct: 243 SPQVKDTTISSVLISPQNPGSLSLKGPVSPPAALSLSTQSLPVVTSSQKTAGPNTPPDFP 302
Query: 370 ISLEERRAQLPKYQ----RNLPRPGQAPIGNPPVGPIG-GMMPPQPGIPQQQGMRPPMPP 424
ISL A L + + L + G + + +P V I P Q+ + PP+P
Sbjct: 303 ISLGSHLAPLHQSSFGSVQLLGQTGPSALSDPTVKTISVDHSSTGASYPSQRSVIPPLPS 362
Query: 425 HGQ 427
+
Sbjct: 363 RNE 365
Score = 35.0 bits (79), Expect = 0.15
Identities = 55/249 (22%), Positives = 84/249 (33%), Gaps = 36/249 (14%)
Query: 141 PMAQPGLPPVPGAPGMPPGIPPLMPGVPPLMPGMPPVMPGM---PPGMMPMGGMMPPGPG 197
P + +PP+P + P P V P + P + + P G + + P
Sbjct: 351 PSQRSVIPPLPSRNEVVPATVAAFPVVAPSVDKGPSTISSITCSPSGSLNVATSFSLSPT 410
Query: 198 IP-------------PLMPGMPPGMPPPVPRPGIPPMTQAQA--------------VSAP 230
PL+ MP P P T A A +S+
Sbjct: 411 TSLILKSSPNATYHYPLVAQMPVSSVGTTPLVVTNPCTIAAAPTTTFEVATCVSPPMSSG 470
Query: 231 GILN-RPPAPTATVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKALFPST 289
I N P +P A V AP P +P A + PV+ + ++L +S FP+
Sbjct: 471 PISNIEPTSPAALVMAPVAP-KEPSTQVATTLRIPVSPPLPDPEDLKNLPSSVLVKFPTQ 529
Query: 290 AQAQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITS 349
Q P + P + A T PT Q+ + + ST++ P + S
Sbjct: 530 KDLQTV---PASLEGAPFSPAQAGLTTKKDPTVLPLVQAAPKNSPSFQSTSSSPEIPL-S 585
Query: 350 KPATLTTTS 358
ATL S
Sbjct: 586 PEATLAKKS 594
>gi|7706501 WW domain binding protein 11 [Homo sapiens]
Length = 641
Score = 95.9 bits (237), Expect = 7e-20
Identities = 78/244 (31%), Positives = 108/244 (44%), Gaps = 37/244 (15%)
Query: 103 ESQKKKQQDDSDEYDDDDSAASTSFQ---PQPVQPQQGYIPPMAQP---GLPPVPGA--P 154
E++K+ Q+ +E D ++ ++S Q PQ V P Q PPM P G PP P P
Sbjct: 365 EAEKQSQKQHKEESHSDGTSTASSQQQAPPQSVPPSQIQAPPMPGPPPLGPPPAPPLRPP 424
Query: 155 GMPPGIPP-LMPGVPPLM--PGMPPVM--------PGMPPGMMPMGGMMPPGPGIPPLMP 203
G P G+PP PG PP + PGMP + PG PPG P G P PG+PP P
Sbjct: 425 GPPTGLPPGPPPGAPPFLRPPGMPGLRGPLPRLLPPGPPPG-RPPGPPPGPPPGLPPGPP 483
Query: 204 --GMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTATVPAPQPPVTKPLFPSAGQM 261
G PP +PPP P PGIPP PG++ RPP PAP P+ G +
Sbjct: 484 PRGPPPRLPPPAP-PGIPP-------PRPGMM-RPPLVPPLGPAPPGLFPPAPLPNPGVL 534
Query: 262 GTPVT------SSSTASSNSESLSASSKALFPSTAQAQAAVQGPVGTDFKPLNSTPATTT 315
P + T+++ E + ++ + P +A + V T + T
Sbjct: 535 SAPPNLIQRPKADDTSAATIEKKATATISAKPQITNPKAEITRFVPTALRVRRENKGATA 594
Query: 316 EPPK 319
P +
Sbjct: 595 APQR 598
Score = 74.7 bits (182), Expect = 2e-13
Identities = 74/268 (27%), Positives = 101/268 (37%), Gaps = 49/268 (18%)
Query: 97 LEQKTQESQKKKQQDDSDEYDDDDSAASTSFQPQPVQPQQGYIPPMAQPGLPPVPGAPGM 156
+ ++ +E ++ + DD D+ DD ++ + Q + G +Q PP
Sbjct: 342 IPEEGREVEEFSEDDDEDDSDDSEAEKQSQKQHKEESHSDGTSTASSQQQAPP------- 394
Query: 157 PPGIPPLMPGVPPLMPGMPPVMPGMPPGMMPMG---GMMP-PGPGIPPLM--PGMP---- 206
+PP PP MPG PP+ P P + P G G+ P P PG PP + PGMP
Sbjct: 395 -QSVPPSQIQAPP-MPGPPPLGPPPAPPLRPPGPPTGLPPGPPPGAPPFLRPPGMPGLRG 452
Query: 207 --PGMPPPVPRPGIPPMTQAQAVSAPGILNRPP--APTATVPAPQPPVTKPLFPSAGQMG 262
P + PP P PG PP PG+ PP P +P P PP P P G M
Sbjct: 453 PLPRLLPPGPPPGRPP--GPPPGPPPGLPPGPPPRGPPPRLPPPAPPGIPP--PRPGMMR 508
Query: 263 TPVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPVGTDFKPLNSTPATTTEPPK--P 320
P+ L + LFP V S P + PK
Sbjct: 509 PPLV---------PPLGPAPPGLFPPAPLPNPGVL-----------SAPPNLIQRPKADD 548
Query: 321 TFPAYTQSTASTTSTTNSTAAKPAASIT 348
T A + A+ T + P A IT
Sbjct: 549 TSAATIEKKATATISAKPQITNPKAEIT 576
Score = 59.3 bits (142), Expect = 7e-09
Identities = 45/139 (32%), Positives = 62/139 (44%), Gaps = 31/139 (22%)
Query: 356 TTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNPPVGPIGGMMPP------- 408
T++A+S+ P + + + +A P PG P+G PP P+ PP
Sbjct: 383 TSTASSQQQAPPQSVPPSQIQAP--------PMPGPPPLGPPPAPPLRPPGPPTGLPPGP 434
Query: 409 ---------QPGIPQQQG----MRPPMPPHGQYGGHHQGMPGYLPGAMPPYGQGPPMVPP 455
PG+P +G + PP PP G+ G G P LP PP G P + PP
Sbjct: 435 PPGAPPFLRPPGMPGLRGPLPRLLPPGPPPGRPPGPPPGPPPGLPPGPPPRGPPPRLPPP 494
Query: 456 YQGG--PPRPPMGMRPPVM 472
G PPRP M MRPP++
Sbjct: 495 APPGIPPPRPGM-MRPPLV 512
Score = 38.1 bits (87), Expect = 0.018
Identities = 75/346 (21%), Positives = 113/346 (32%), Gaps = 41/346 (11%)
Query: 149 PVPGAPGMPPGIPPLMPGVPPLMPGMPPVMPGMPPGMMPMGGMMPP--GPGIPPLM---- 202
P+P P P I L+ +P +PG P P + PP I PL+
Sbjct: 140 PLPDMPHAPSNI--LIQDIP--LPGAQP-----PSILKKTSAYGPPTRAVSILPLLGHGV 190
Query: 203 PGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTATVPAPQPPVTKPLFPSAGQMG 262
P +PPG PP P PG PP Q + R +P + P Q G
Sbjct: 191 PRLPPGRKPPGPPPGPPPPQVVQ------MYGRKVGFALDLPPRRRDEDMLYSPELAQRG 244
Query: 263 --TPVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPVGTDFKPLNSTPATTTEPPKP 320
V+S+S E + + + G +F ++ E K
Sbjct: 245 HDDDVSSTSEDDGYPEDMDQDKHDDSTDDSDTDKSDGESDGDEFVHRDNGERDNNEEKKS 304
Query: 321 TFPA--YTQSTASTTSTTNSTAAKPAASITSK------PATLTTTSATSKLIHPDEDISL 372
S N P ++ + P S+ D+
Sbjct: 305 GLSVRFADMPGKSRKKKKNMKELTPLQAMMLRMAGQEIPEEGREVEEFSEDDDEDDSDDS 364
Query: 373 EERRAQLPKYQRNLPRPGQAPIGNPPVGPIGGMMPPQ---PGIPQQQGMRPPMPPHGQYG 429
E + +++ G + + P + P Q P +P + PP P +
Sbjct: 365 EAEKQSQKQHKEESHSDGTSTASSQQQAPPQSVPPSQIQAPPMPGPPPLGPPPAPPLRPP 424
Query: 430 GHHQGMPGYLPGAMPPYGQGPPMVPPYQGG-----PPRPPMGMRPP 470
G G+P P PP+ + PP +P +G PP PP G RPP
Sbjct: 425 GPPTGLPPGPPPGAPPFLR-PPGMPGLRGPLPRLLPPGPPPG-RPP 468
Score = 34.3 bits (77), Expect = 0.26
Identities = 30/108 (27%), Positives = 44/108 (40%), Gaps = 7/108 (6%)
Query: 369 DISLEERRAQLPKYQRNLPRPGQAPIGNPPVGPIGGMMPPQPGIPQQQGMRPP--MPPHG 426
++ E++RAQL +Y + + + P+ MP P Q + P PP
Sbjct: 111 EVEYEQKRAQLSQYFDAVKNAQHVEVESIPLPD----MPHAPSNILIQDIPLPGAQPPSI 166
Query: 427 QYGGHHQGMPGYLPGAMPPYGQGPPMVPPYQGGPPRPPMGMRPPVMSQ 474
G P +P G G P +PP + PP PP G PP + Q
Sbjct: 167 LKKTSAYGPPTRAVSILPLLGHGVPRLPPGR-KPPGPPPGPPPPQVVQ 213
Score = 32.0 bits (71), Expect = 1.3
Identities = 30/120 (25%), Positives = 46/120 (38%), Gaps = 24/120 (20%)
Query: 99 QKTQESQKKKQQDDSDEYDDDDSAASTSFQPQPVQPQQGYIPPMAQPGLPPVPGAPGMPP 158
+K + ++K+ S +D +A + P+ P + P P+PGA PP
Sbjct: 108 RKLEVEYEQKRAQLSQYFDAVKNAQHVEVESIPL-PDMPHAPSNILIQDIPLPGA--QPP 164
Query: 159 GIPPLMPGVPP------LMPGMPPVMPGMPPGMMPMGGMMPPGPGIPPLMPGMPPGMPPP 212
I P ++P + +P +PPG P PG PPG PPP
Sbjct: 165 SILKKTSAYGPPTRAVSILPLLGHGVPRLPPGRKP---------------PGPPPGPPPP 209
>gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2
[Homo sapiens]
Length = 1132
Score = 89.0 bits (219), Expect = 9e-18
Identities = 103/390 (26%), Positives = 135/390 (34%), Gaps = 68/390 (17%)
Query: 107 KKQQDDSDEYDDDDSAASTSFQPQPVQPQQGYIPPMAQPGLPPVPGAPGMPPGIPPLMPG 166
KK +++ + +++ + P P +P +PP+ P VP PP +PP PG
Sbjct: 620 KKPENEVAQNGGAETSHTEPVSPIP-KPLPVPVPPIPVPAPITVP-----PPQVPPHQPG 673
Query: 167 VPPLMPGMPPVMPGM-PPGMMPMGGMMPP--GPGIPPLMPGMPPGMPPPVPRPGIPPMTQ 223
PPV+ + PP P G+ PP GPG+P PP PPP RPG PM
Sbjct: 674 --------PPVVGALQPPAFTPPLGIPPPGFGPGVP------PPPPPPPFLRPGFNPMHL 719
Query: 224 AQAVSAPGILNRPPAPTATVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSK 283
PG PP P + PP T P+ + +S+ A N ++ S
Sbjct: 720 PPGFLPPG----PPPPITPPVSIPPPHTPPI---------SIPNSTIAGINEDTTKDLSI 766
Query: 284 ALFPSTAQAQAAVQGPVGTDFKPLNST--PATTTEPPKPTFPAYTQSTASTTSTTNSTAA 341
T + A G K S PA T P P S +
Sbjct: 767 GNPIPTVVSGARGNAESGDSVKMYGSAVPPAAPTNLPTP-------PVTQPVSLLGTQGV 819
Query: 342 KPAASITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNPPVGP 401
P I + + A LI + Q P P PP GP
Sbjct: 820 APGPVIGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGP 879
Query: 402 IGGMMPPQPGIPQQQGMRPPMPPHGQY----GGHHQGMPGYLPGA-----------MPPY 446
G MPP GM+ P PPHG + G G PG PG P
Sbjct: 880 GGFAMPP------PHGMKGPFPPHGPFVRPGGMPGLGGPGPGPGGPEDRDGRQQPPQQPQ 933
Query: 447 GQGPPMVP--PYQGGPPRPPMGMRPPVMSQ 474
Q P P P Q +PP +PP Q
Sbjct: 934 QQPQPQAPQQPQQQQQQQPPPSQQPPPTQQ 963
Score = 79.3 bits (194), Expect = 7e-15
Identities = 103/364 (28%), Positives = 128/364 (35%), Gaps = 102/364 (28%)
Query: 120 DSAASTSFQPQPVQPQQGYIPPMAQPGLPPVPGAPGMPPGIPPLMPGVPPLMPGMPPVMP 179
+ A TS +PV P IP +PP+P P P +PP P VPP PG P V
Sbjct: 629 NGGAETS-HTEPVSP----IPKPLPVPVPPIP-VPA-PITVPP--PQVPPHQPGPPVVGA 679
Query: 180 GMPPGMMPMGGMMPPG--PGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPP 237
PP P G+ PPG PG+PP P PPP RPG PM PG PP
Sbjct: 680 LQPPAFTPPLGIPPPGFGPGVPP------PPPPPPFLRPGFNPMHLPPGFLPPG----PP 729
Query: 238 APTATVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKALFPSTAQAQAAVQ 297
P + PP T P+ + +S+ A N ++ S T + A
Sbjct: 730 PPITPPVSIPPPHTPPI---------SIPNSTIAGINEDTTKDLSIGNPIPTVVSGARGN 780
Query: 298 GPVGTDFKPLNST--PATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLT 355
G K S PA T P P ++P +L
Sbjct: 781 AESGDSVKMYGSAVPPAAPTNLPTPP--------------------------VTQPVSLL 814
Query: 356 TTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNPPVGPIGGMMPPQ----PG 411
T + P I L Q P RPG P+ PP GM PP P
Sbjct: 815 GTQGVA----PGPVIGL-----QAPSTGLLGARPGLIPLQRPP-----GMPPPHLQRFPL 860
Query: 412 IPQQQGMRPPMPPHGQYGGHHQGMPGYLPGAMPPYGQGPPMVPPYQGGPPRPPMGMRPPV 471
+P + PMPPH + G PP G G +PP P GM+ P
Sbjct: 861 MPPR-----PMPPHMMHRG-------------PPPGPGGFAMPP--------PHGMKGPF 894
Query: 472 MSQG 475
G
Sbjct: 895 PPHG 898
Score = 50.4 bits (119), Expect = 3e-06
Identities = 45/120 (37%), Positives = 50/120 (41%), Gaps = 19/120 (15%)
Query: 131 PVQPQQGYIPPMAQPGLPPVPGAPGMPPGIPPLMPGVPPLMPGMPPVMPGMPPGMMPMGG 190
P+ P + P M G PP PG MPP P M G P P P V PG PG+ GG
Sbjct: 859 PLMPPRPMPPHMMHRGPPPGPGGFAMPP--PHGMKG--PFPPHGPFVRPGGMPGL---GG 911
Query: 191 MMPPGPGIPPLMP------GMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTATVP 244
PGPG P P PP P P+P P Q Q P +PP PT P
Sbjct: 912 ---PGPG--PGGPEDRDGRQQPPQQPQQQPQPQAPQQPQQQQQQQPPPSQQPP-PTQQQP 965
Score = 47.0 bits (110), Expect = 4e-05
Identities = 64/260 (24%), Positives = 93/260 (35%), Gaps = 55/260 (21%)
Query: 249 PVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPVGTDFKPLN 308
PV + + + G PV SS + + S + PS+ A Q T + L
Sbjct: 128 PVAENVTNNEGSPPPPVKVSSEPPTQATPNSVPAVPQLPSSDAFAAVAQLFQTTQGQQLQ 187
Query: 309 STPATTTEPPKPTFPAYTQS----TASTTSTTNSTAAKPAASITSKPATLTTTSATSKLI 364
T +PPKP PA + + T+ +T +P+ + P T+ KL+
Sbjct: 188 QILQTFQQPPKPQSPALDNAVMAQVQAITAQLKTTPTQPSEQKAAFPPPEQKTAFDKKLL 247
Query: 365 ----HPDEDISLEERR-------------AQLPKYQRNLPRPGQAPIG---NPPVGPIG- 403
+ DE ++EE + A +P AP PP P G
Sbjct: 248 DRFDYDDEPEAVEESKKEDTTAVTTTAPAAAVPPAPTATVPAAAAPAAASPPPPQAPFGF 307
Query: 404 -GMMPPQPGIPQQQGM-----------------RPPMPPHGQYGGHHQGMPGYLPGAMPP 445
G QP Q Q M + P+PP+GQ MPG+ PP
Sbjct: 308 PGDGMQQPAYTQHQNMDQFQPRMMGIQQDPMHHQVPLPPNGQ-------MPGFGLLPTPP 360
Query: 446 YGQGPPMVPPYQGGPPRPPM 465
+ PPM P PP PP+
Sbjct: 361 F---PPMAQPVI--PPTPPV 375
Score = 40.0 bits (92), Expect = 0.005
Identities = 43/144 (29%), Positives = 56/144 (38%), Gaps = 27/144 (18%)
Query: 98 EQKTQESQKKKQQDDSDEYDD-------DDSAASTSFQPQPVQPQQ--GYIPPMAQPGL- 147
EQKT +K + D D+ + +D+ A T+ P P +P A P
Sbjct: 237 EQKTAFDKKLLDRFDYDDEPEAVEESKKEDTTAVTTTAPAAAVPPAPTATVPAAAAPAAA 296
Query: 148 -PPVPGAPGMPPGIPPLMPGVP---------PLMPG-----MPPVMPGMPPGMMPMGGMM 192
PP P AP PG P P M G M +P P G MP G++
Sbjct: 297 SPPPPQAPFGFPGDGMQQPAYTQHQNMDQFQPRMMGIQQDPMHHQVPLPPNGQMPGFGLL 356
Query: 193 PPGPGIPPLMPGMPPGMPPPVPRP 216
P P P P +PP PPV +P
Sbjct: 357 PTPPFPPMAQPVIPP--TPPVQQP 378
Score = 29.6 bits (65), Expect = 6.3
Identities = 18/43 (41%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 222 TQAQAVSAPGILNRPPAPTATVPAPQPPVTKPLFPSAGQMGTP 264
T A +AP PPAPTATVPA P P G P
Sbjct: 267 TTAVTTTAPAAAV-PPAPTATVPAAAAPAAASPPPPQAPFGFP 308
>gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1
[Homo sapiens]
Length = 1147
Score = 89.0 bits (219), Expect = 9e-18
Identities = 103/390 (26%), Positives = 135/390 (34%), Gaps = 68/390 (17%)
Query: 107 KKQQDDSDEYDDDDSAASTSFQPQPVQPQQGYIPPMAQPGLPPVPGAPGMPPGIPPLMPG 166
KK +++ + +++ + P P +P +PP+ P VP PP +PP PG
Sbjct: 635 KKPENEVAQNGGAETSHTEPVSPIP-KPLPVPVPPIPVPAPITVP-----PPQVPPHQPG 688
Query: 167 VPPLMPGMPPVMPGM-PPGMMPMGGMMPP--GPGIPPLMPGMPPGMPPPVPRPGIPPMTQ 223
PPV+ + PP P G+ PP GPG+P PP PPP RPG PM
Sbjct: 689 --------PPVVGALQPPAFTPPLGIPPPGFGPGVP------PPPPPPPFLRPGFNPMHL 734
Query: 224 AQAVSAPGILNRPPAPTATVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSK 283
PG PP P + PP T P+ + +S+ A N ++ S
Sbjct: 735 PPGFLPPG----PPPPITPPVSIPPPHTPPI---------SIPNSTIAGINEDTTKDLSI 781
Query: 284 ALFPSTAQAQAAVQGPVGTDFKPLNST--PATTTEPPKPTFPAYTQSTASTTSTTNSTAA 341
T + A G K S PA T P P S +
Sbjct: 782 GNPIPTVVSGARGNAESGDSVKMYGSAVPPAAPTNLPTP-------PVTQPVSLLGTQGV 834
Query: 342 KPAASITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNPPVGP 401
P I + + A LI + Q P P PP GP
Sbjct: 835 APGPVIGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGP 894
Query: 402 IGGMMPPQPGIPQQQGMRPPMPPHGQY----GGHHQGMPGYLPGA-----------MPPY 446
G MPP GM+ P PPHG + G G PG PG P
Sbjct: 895 GGFAMPP------PHGMKGPFPPHGPFVRPGGMPGLGGPGPGPGGPEDRDGRQQPPQQPQ 948
Query: 447 GQGPPMVP--PYQGGPPRPPMGMRPPVMSQ 474
Q P P P Q +PP +PP Q
Sbjct: 949 QQPQPQAPQQPQQQQQQQPPPSQQPPPTQQ 978
Score = 79.3 bits (194), Expect = 7e-15
Identities = 103/364 (28%), Positives = 128/364 (35%), Gaps = 102/364 (28%)
Query: 120 DSAASTSFQPQPVQPQQGYIPPMAQPGLPPVPGAPGMPPGIPPLMPGVPPLMPGMPPVMP 179
+ A TS +PV P IP +PP+P P P +PP P VPP PG P V
Sbjct: 644 NGGAETS-HTEPVSP----IPKPLPVPVPPIP-VPA-PITVPP--PQVPPHQPGPPVVGA 694
Query: 180 GMPPGMMPMGGMMPPG--PGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPP 237
PP P G+ PPG PG+PP P PPP RPG PM PG PP
Sbjct: 695 LQPPAFTPPLGIPPPGFGPGVPP------PPPPPPFLRPGFNPMHLPPGFLPPG----PP 744
Query: 238 APTATVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKALFPSTAQAQAAVQ 297
P + PP T P+ + +S+ A N ++ S T + A
Sbjct: 745 PPITPPVSIPPPHTPPI---------SIPNSTIAGINEDTTKDLSIGNPIPTVVSGARGN 795
Query: 298 GPVGTDFKPLNST--PATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLT 355
G K S PA T P P ++P +L
Sbjct: 796 AESGDSVKMYGSAVPPAAPTNLPTPP--------------------------VTQPVSLL 829
Query: 356 TTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNPPVGPIGGMMPPQ----PG 411
T + P I L Q P RPG P+ PP GM PP P
Sbjct: 830 GTQGVA----PGPVIGL-----QAPSTGLLGARPGLIPLQRPP-----GMPPPHLQRFPL 875
Query: 412 IPQQQGMRPPMPPHGQYGGHHQGMPGYLPGAMPPYGQGPPMVPPYQGGPPRPPMGMRPPV 471
+P + PMPPH + G PP G G +PP P GM+ P
Sbjct: 876 MPPR-----PMPPHMMHRG-------------PPPGPGGFAMPP--------PHGMKGPF 909
Query: 472 MSQG 475
G
Sbjct: 910 PPHG 913
Score = 50.4 bits (119), Expect = 3e-06
Identities = 45/120 (37%), Positives = 50/120 (41%), Gaps = 19/120 (15%)
Query: 131 PVQPQQGYIPPMAQPGLPPVPGAPGMPPGIPPLMPGVPPLMPGMPPVMPGMPPGMMPMGG 190
P+ P + P M G PP PG MPP P M G P P P V PG PG+ GG
Sbjct: 874 PLMPPRPMPPHMMHRGPPPGPGGFAMPP--PHGMKG--PFPPHGPFVRPGGMPGL---GG 926
Query: 191 MMPPGPGIPPLMP------GMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTATVP 244
PGPG P P PP P P+P P Q Q P +PP PT P
Sbjct: 927 ---PGPG--PGGPEDRDGRQQPPQQPQQQPQPQAPQQPQQQQQQQPPPSQQPP-PTQQQP 980
Score = 47.0 bits (110), Expect = 4e-05
Identities = 64/260 (24%), Positives = 93/260 (35%), Gaps = 55/260 (21%)
Query: 249 PVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPVGTDFKPLN 308
PV + + + G PV SS + + S + PS+ A Q T + L
Sbjct: 143 PVAENVTNNEGSPPPPVKVSSEPPTQATPNSVPAVPQLPSSDAFAAVAQLFQTTQGQQLQ 202
Query: 309 STPATTTEPPKPTFPAYTQS----TASTTSTTNSTAAKPAASITSKPATLTTTSATSKLI 364
T +PPKP PA + + T+ +T +P+ + P T+ KL+
Sbjct: 203 QILQTFQQPPKPQSPALDNAVMAQVQAITAQLKTTPTQPSEQKAAFPPPEQKTAFDKKLL 262
Query: 365 ----HPDEDISLEERR-------------AQLPKYQRNLPRPGQAPIG---NPPVGPIG- 403
+ DE ++EE + A +P AP PP P G
Sbjct: 263 DRFDYDDEPEAVEESKKEDTTAVTTTAPAAAVPPAPTATVPAAAAPAAASPPPPQAPFGF 322
Query: 404 -GMMPPQPGIPQQQGM-----------------RPPMPPHGQYGGHHQGMPGYLPGAMPP 445
G QP Q Q M + P+PP+GQ MPG+ PP
Sbjct: 323 PGDGMQQPAYTQHQNMDQFQPRMMGIQQDPMHHQVPLPPNGQ-------MPGFGLLPTPP 375
Query: 446 YGQGPPMVPPYQGGPPRPPM 465
+ PPM P PP PP+
Sbjct: 376 F---PPMAQPVI--PPTPPV 390
Score = 40.0 bits (92), Expect = 0.005
Identities = 43/144 (29%), Positives = 56/144 (38%), Gaps = 27/144 (18%)
Query: 98 EQKTQESQKKKQQDDSDEYDD-------DDSAASTSFQPQPVQPQQ--GYIPPMAQPGL- 147
EQKT +K + D D+ + +D+ A T+ P P +P A P
Sbjct: 252 EQKTAFDKKLLDRFDYDDEPEAVEESKKEDTTAVTTTAPAAAVPPAPTATVPAAAAPAAA 311
Query: 148 -PPVPGAPGMPPGIPPLMPGVP---------PLMPG-----MPPVMPGMPPGMMPMGGMM 192
PP P AP PG P P M G M +P P G MP G++
Sbjct: 312 SPPPPQAPFGFPGDGMQQPAYTQHQNMDQFQPRMMGIQQDPMHHQVPLPPNGQMPGFGLL 371
Query: 193 PPGPGIPPLMPGMPPGMPPPVPRP 216
P P P P +PP PPV +P
Sbjct: 372 PTPPFPPMAQPVIPP--TPPVQQP 393
Score = 29.6 bits (65), Expect = 6.3
Identities = 18/43 (41%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 222 TQAQAVSAPGILNRPPAPTATVPAPQPPVTKPLFPSAGQMGTP 264
T A +AP PPAPTATVPA P P G P
Sbjct: 282 TTAVTTTAPAAAV-PPAPTATVPAAAAPAAASPPPPQAPFGFP 323
>gi|146134388 YLP motif containing 1 [Homo sapiens]
Length = 2146
Score = 84.7 bits (208), Expect = 2e-16
Identities = 105/368 (28%), Positives = 148/368 (40%), Gaps = 65/368 (17%)
Query: 129 PQPVQPQQGYIPPMAQPGLPPVPGAPGMPPGI-PPLMPG-VPPLMPGM-PPVMPGMPPGM 185
P P P PP+ P +PP P +PP + PP +P VPP PGM PPVMP P
Sbjct: 517 PPPFVPYSQMPPPL--PTMPPPVLPPSLPPPVMPPALPATVPP--PGMPPPVMPPSLPTS 572
Query: 186 MPMGGMMP--PGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTATV 243
+P GM P G PP++P PP + P P +PP + + P ++ PP +AT
Sbjct: 573 VPPPGMPPSLSSAGPPPVLP--PPSLSSAGPPPVLPP-PSLSSTAPPPVMPLPPLSSATP 629
Query: 244 P--APQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPVG 301
P P P V + + P P SSS +S E AL P+ PV
Sbjct: 630 PPGIPPPGVPQGIPPQLTAAPVPPASSSQSSQVPEK---PRPALLPT----------PVS 676
Query: 302 TDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSATS 361
S P TT PP + S + S +A P +S +S +++A S
Sbjct: 677 -----FGSAPPTTYHPP---LQSAGPSEQVNSKAPLSKSALPYSSFSSDQGLGESSAAPS 728
Query: 362 KLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNPPVGP----------IGGMMP-PQP 410
+ I +D+ + LP P ++ P GP +G P+P
Sbjct: 729 QPITAVKDMPVRSGGL--------LPDPPRSSYLESPRGPRFDGPRRFEDLGSRCEGPRP 780
Query: 411 GIPQQQGMRPPMPPHGQYGGH----HQGMPGYLP--GAMPPYGQGPPMVPPYQGGP---- 460
P+ +G RP P +Y GH + G +P A Y + P Q GP
Sbjct: 781 KGPRFEGNRPD-GPRPRYEGHPAEGTKSKWGMIPRGPASQFYITPSTSLSPRQSGPQWKG 839
Query: 461 PRPPMGMR 468
P+P G +
Sbjct: 840 PKPAFGQQ 847
Score = 62.8 bits (151), Expect = 7e-10
Identities = 88/381 (23%), Positives = 133/381 (34%), Gaps = 105/381 (27%)
Query: 124 STSFQPQPVQPQQGYIPPMAQPG-------LPPVPGAPGM-------------------- 156
S+ + P PV P P A PG P P + G
Sbjct: 11 SSHYPPPPVPPPPPVALPEASPGPGYSSSTTPAAPSSSGFMSFREQHLAQLQQLQQMHQK 70
Query: 157 -------PPGIPPLMPGVPPLMPGMPPVMPG--------MPPGMMPMGGMMPPGP----- 196
P +PP PPL P PPVMPG PP M P PPGP
Sbjct: 71 QMQCVLQPHHLPP-----PPLPP--PPVMPGGGYGDWQPPPPPMPP-----PPGPALSYQ 118
Query: 197 ------------------GIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPA 238
G+ P+ PP PP P +PP P PP
Sbjct: 119 KQQQYKHQMLHHQRDGPPGLVPMELESPPESPPVPPGSYMPPSQSYMPPPQPPPSYYPPT 178
Query: 239 PTATVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKALFPSTAQAQAAVQG 298
+ P P PS + P S S++SS+S+S + S++ PS +QA+
Sbjct: 179 SSQPYLPPAQPSPSQSPPSQSYL-APTPSYSSSSSSSQSYLSHSQSYLPS---SQASPSR 234
Query: 299 PVGTDFKPLNSTPATTTEPPKPTFPAYTQSTAS----TTSTTNSTAAKPAASITSKPATL 354
P + + PP P+ P ++T + N + + A+ P+T+
Sbjct: 235 P------SQGHSKSQLLAPPPPSAPPGNKTTVQQEPLESGAKNKSTEQQQAAPEPDPSTM 288
Query: 355 TTTSATSKLIHPDEDISLEER-RAQLPKYQ------RNLPRPGQAPIGNPPVGPI----G 403
T + + +SL++R + LP ++ ++ P P + + P +
Sbjct: 289 -TPQEQQQYWYRQHLLSLQQRTKVHLPGHKKGPVVAKDTPEPVKEEVTVPATSQVPESPS 347
Query: 404 GMMPPQPGIPQQQGMRPPMPP 424
PP P P + + PP+PP
Sbjct: 348 SEEPPLP--PPNEEVPPPLPP 366
Score = 52.8 bits (125), Expect = 7e-07
Identities = 73/296 (24%), Positives = 106/296 (35%), Gaps = 30/296 (10%)
Query: 181 MPPGMMPMGGMMPPGPGIPPLMPGMPPG-MPPPVPRPGIPPMTQAQAVSAPGILNRPPAP 239
MPP +P M PP +P MPP +PP +P P +PP A V PG+ PP
Sbjct: 516 MPPPFVPYSQMPPP-------LPTMPPPVLPPSLPPPVMPPALPA-TVPPPGM--PPPVM 565
Query: 240 TATVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGP 299
++P PP P PS G P + S++ STA P
Sbjct: 566 PPSLPTSVPPPGMP--PSLSSAGPPPVLPPPSLSSAGPPPVLPPPSLSSTAPPPVMPLPP 623
Query: 300 VGTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATL----- 354
+ + P P + P A AS +S ++ KP ++ P +
Sbjct: 624 LSSATPPPGIPPPGVPQGIPPQLTAAPVPPAS-SSQSSQVPEKPRPALLPTPVSFGSAPP 682
Query: 355 TTTSATSKLIHPDEDISLEE--RRAQLPKYQRNLPRPGQAPIGNPPVGPIGGMMPPQPGI 412
TT + P E ++ + ++ LP Y G P PI + +
Sbjct: 683 TTYHPPLQSAGPSEQVNSKAPLSKSALP-YSSFSSDQGLGESSAAPSQPITAV----KDM 737
Query: 413 PQQQGMRPPMPPHGQYGGHHQGMPGYLPGAMPPYG---QGP-PMVPPYQGGPPRPP 464
P + G P PP Y +G P G +GP P P ++G P P
Sbjct: 738 PVRSGGLLPDPPRSSYLESPRGPRFDGPRRFEDLGSRCEGPRPKGPRFEGNRPDGP 793
Score = 45.8 bits (107), Expect = 8e-05
Identities = 50/183 (27%), Positives = 67/183 (36%), Gaps = 36/183 (19%)
Query: 311 PATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSATSKLIHPDEDI 370
P PP P + ++STT PAA +S + L +
Sbjct: 16 PPPVPPPPPVALPEASPGPGYSSSTT------PAAPSSSGFMSFRE----QHLAQLQQLQ 65
Query: 371 SLEERRAQLPKYQRNLPRPGQAPIGNPPVGPIGGM---MPPQPGIPQQQGMRPPMPPHGQ 427
+ +++ Q +LP P P+ PPV P GG PP P +P G Q
Sbjct: 66 QMHQKQMQCVLQPHHLPPP---PLPPPPVMPGGGYGDWQPPPPPMPPPPGPALSYQKQQQ 122
Query: 428 YGG---HHQ--GMPGYLPGAMPPYGQGPPMVPPYQGG-----------PPRPPMGMRPPV 471
Y HHQ G PG +P + + PP PP G PP+PP PP
Sbjct: 123 YKHQMLHHQRDGPPGLVPMEL----ESPPESPPVPPGSYMPPSQSYMPPPQPPPSYYPPT 178
Query: 472 MSQ 474
SQ
Sbjct: 179 SSQ 181
Score = 40.4 bits (93), Expect = 0.004
Identities = 40/121 (33%), Positives = 43/121 (35%), Gaps = 24/121 (19%)
Query: 379 LPKYQRNLPRPGQAPIGNPPVGPIGGMMPPQPGIPQQQGMRPP-MPPHGQYGGHHQGMPG 437
+P Q P P P PP P M P P GM PP MPP GMP
Sbjct: 521 VPYSQMPPPLPTMPPPVLPPSLPPPVMPPALPATVPPPGMPPPVMPPSLPTSVPPPGMPP 580
Query: 438 YLPGAMPP--------YGQGPPMV-----------PPYQGGPP----RPPMGMRPPVMSQ 474
L A PP GPP V PP PP PP G+ PP + Q
Sbjct: 581 SLSSAGPPPVLPPPSLSSAGPPPVLPPPSLSSTAPPPVMPLPPLSSATPPPGIPPPGVPQ 640
Query: 475 G 475
G
Sbjct: 641 G 641
Score = 40.4 bits (93), Expect = 0.004
Identities = 43/160 (26%), Positives = 57/160 (35%), Gaps = 35/160 (21%)
Query: 133 QPQQGYIPPMAQPGLPPVPGAPGMPPGIPPLMPGVPPLMPGMPPVMPGMPPGMMPMGGMM 192
+PQ P + L PGM P PP PP M G PPG +
Sbjct: 1482 EPQMADHLPPQESRLQNTSSRPGMYP---------PPGSYRPPPPM-GKPPGSIVRPSAP 1531
Query: 193 PPGPGIPPLMPGMP-PGMPPPVPRPGIPPMTQAQAVSA-------------------PGI 232
P +P P +P P PPP P P PP+ + Q + G+
Sbjct: 1532 PARSSVPVTRPPVPIPPPPPPPPLPPPPPVIKPQTSAVEQERWDEDSFYGLWDTNDEQGL 1591
Query: 233 LNRPPAPTATVPA----PQPPVTKPLFPSAG-QMGTPVTS 267
+ + TA +P+ P PPV + P MG P S
Sbjct: 1592 NSEFKSETAAIPSAPVLPPPPVHSSIPPPGPVPMGMPPMS 1631
Score = 39.7 bits (91), Expect = 0.006
Identities = 48/192 (25%), Positives = 68/192 (35%), Gaps = 42/192 (21%)
Query: 88 KDMDERRRLLEQKTQESQKKKQQDDSDEYD----DDDSAASTSFQPQPVQPQQGYIPPMA 143
K E + L EQK Q + K + D + +TS +P P Y PP
Sbjct: 1458 KAAQELKMLREQKEQLQKMKDFGSEPQMADHLPPQESRLQNTSSRPGMYPPPGSYRPP-- 1515
Query: 144 QPGLPPVPGAPG--MPPGIPPLMPGVPPLMPGMP----PVMPGMPPGMMPMGGMMPPGPG 197
PP+ PG + P PP VP P +P P P +P PP P
Sbjct: 1516 ----PPMGKPPGSIVRPSAPPARSSVPVTRPPVPIPPPPPPPPLP----------PPPPV 1561
Query: 198 IPPLMPGMPP---------GMPPPVPRPGIPPMTQAQAVSAPG--ILNRPPA-----PTA 241
I P + G+ G+ +++ + P +L PP P
Sbjct: 1562 IKPQTSAVEQERWDEDSFYGLWDTNDEQGLNSEFKSETAAIPSAPVLPPPPVHSSIPPPG 1621
Query: 242 TVPAPQPPVTKP 253
VP PP++KP
Sbjct: 1622 PVPMGMPPMSKP 1633
Score = 38.5 bits (88), Expect = 0.014
Identities = 52/223 (23%), Positives = 74/223 (33%), Gaps = 38/223 (17%)
Query: 231 GILNRPPAPTATVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKALFPSTA 290
G + PP P VP P P P G +S++ A+ +S + +
Sbjct: 10 GSSHYPPPP---VPPPPPVALPEASPGPGYS----SSTTPAAPSSSGFMSFREQHLAQLQ 62
Query: 291 QAQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSK 350
Q Q Q + +P + P PP P P PA S +
Sbjct: 63 QLQQMHQKQMQCVLQPHHLPPPPL--PPPPVMPGGGYGDWQPPPPPMPPPPGPALSYQKQ 120
Query: 351 PATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAP--IGNPPVGPIGGMMPP 408
++ + Q+ +QR+ P PG P + +PP P +PP
Sbjct: 121 ----------------------QQYKHQMLHHQRDGP-PGLVPMELESPPESP---PVPP 154
Query: 409 QPGIPQQQGMRPPMPPHGQYGGHHQGMPGYLPGAMPPYGQGPP 451
+P Q PP P Y P YLP A P Q PP
Sbjct: 155 GSYMPPSQSYMPPPQPPPSYYPPTSSQP-YLPPAQPSPSQSPP 196
Score = 33.5 bits (75), Expect = 0.44
Identities = 30/96 (31%), Positives = 36/96 (37%), Gaps = 26/96 (27%)
Query: 378 QLPKYQRNLPRPGQAPIGNPPVGPIGGMMPPQP-GIPQQQGMRPPMPPHGQYGGHHQGMP 436
Q + Q RPG P P G PP P G P +RP PP
Sbjct: 1492 QESRLQNTSSRPGMYP-------PPGSYRPPPPMGKPPGSIVRPSAPP----------AR 1534
Query: 437 GYLPGAMPPYGQGPPMVPPYQGGPPRPPMGMRPPVM 472
+P PP P+ PP PP PP+ PPV+
Sbjct: 1535 SSVPVTRPPV----PIPPP----PPPPPLPPPPPVI 1562
Score = 32.3 bits (72), Expect = 0.97
Identities = 25/70 (35%), Positives = 28/70 (40%), Gaps = 5/70 (7%)
Query: 406 MPPQPGIPQQQGMRPPM-PPHGQYGGHHQ--GMPGYL--PGAMPPYGQGPPMVPPYQGGP 460
+PPQ Q RP M PP G Y PG + P A P P PP P
Sbjct: 1489 LPPQESRLQNTSSRPGMYPPPGSYRPPPPMGKPPGSIVRPSAPPARSSVPVTRPPVPIPP 1548
Query: 461 PRPPMGMRPP 470
P PP + PP
Sbjct: 1549 PPPPPPLPPP 1558
Score = 29.6 bits (65), Expect = 6.3
Identities = 21/88 (23%), Positives = 27/88 (30%), Gaps = 7/88 (7%)
Query: 379 LPKYQRNLPRPGQAPIGNPPVGPIGGMMPPQPGIPQQQGMRPPMPPHGQYGGHHQGMPGY 438
+P Q +P P P PP + P QP Q + + P Y Y
Sbjct: 158 MPPSQSYMPPPQPPPSYYPPTSSQPYLPPAQPSPSQSPPSQSYLAPTPSYSSSSSSSQSY 217
Query: 439 LPGAMPPYGQGPPMVPPYQGGPPRPPMG 466
L +P Q P RP G
Sbjct: 218 L-------SHSQSYLPSSQASPSRPSQG 238
Score = 29.3 bits (64), Expect = 8.2
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 5/36 (13%)
Query: 150 VPGAPGMPPGIPPLMPGVPPLMP---GMPPVMPGMP 182
+P AP +PP PP+ +PP P GMPP+ P
Sbjct: 1602 IPSAPVLPP--PPVHSSIPPPGPVPMGMPPMSKPPP 1635
>gi|91208418 transcription elongation regulator 1 isoform 2 [Homo
sapiens]
Length = 1077
Score = 84.0 bits (206), Expect = 3e-16
Identities = 103/387 (26%), Positives = 145/387 (37%), Gaps = 55/387 (14%)
Query: 120 DSAASTSFQPQPVQPQQGYIPPMAQPGLPPVPGAPGMPPGIPP-----LMPGVPPLMP-- 172
D S F P ++ Q P PP G PP + P +M G PP
Sbjct: 7 DGGESERFNPGELRMAQQQALRFRGPAPPPNAVMRGPPPLMRPPPPFGMMRGPPPPPRPP 66
Query: 173 -GMPPVMPGMPPGMMPMGGMMPP-GP---GIPPLMPGMPPGMPPP---VPRPGIPPMTQA 224
G PP P MPP M P GG+ PP GP PP MP MPPP + PG+PP+T
Sbjct: 67 FGRPPFDPNMPP-MPPPGGIPPPMGPPHLQRPPFMPPPMSSMPPPPGMMFPPGMPPVTAP 125
Query: 225 QAVSAP-----GILNRPP--------APTATVPAPQPPVTK--------PLFPSAGQMGT 263
+ P + N+ P A T +P K P+ + Q+
Sbjct: 126 GTPALPPTEEIWVENKTPDGKVYYYNARTRESAWTKPDGVKVIQQSELTPMLAAQAQVQA 185
Query: 264 PVTSSSTASSNSES---LSASSKALFPSTAQAQAAVQGPVGTDFKPLNSTPATTTEPPKP 320
+ + A + +++ A ++A + AQAQA Q + A +
Sbjct: 186 QAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQVQA 245
Query: 321 TFPAYTQSTASTTSTTNSTAAKPAASI-TSKPATLTTTSATSKLIHPDEDISLEERRAQL 379
A Q+ A ST +++ PA S TS +TTS T+ + +S + Q
Sbjct: 246 QVQAQVQAQAVGASTPTTSSPAPAVSTSTSSSTPSSTTSTTTTATSVAQTVSTPTTQDQT 305
Query: 380 PK---------YQRNLPRPGQAPIGNPPVGPIGGMMPPQP-GIPQQQGMRPPMPP--HGQ 427
P + P P P+ P + P P +PQ P PP
Sbjct: 306 PSSAVSVATPTVSVSTPAPTATPVQTVPQPHPQTLPPAVPHSVPQPTTAIPAFPPVMVPP 365
Query: 428 YGGHHQGMPGYLPGAMPPYGQGPPMVP 454
+ GMP LPG +P G PP+VP
Sbjct: 366 FRVPLPGMPIPLPGVLP--GMAPPIVP 390
Score = 79.7 bits (195), Expect = 5e-15
Identities = 95/374 (25%), Positives = 143/374 (38%), Gaps = 69/374 (18%)
Query: 140 PPMAQPGLPPVPGAPGMPPGIPPLMP-GVPPLMPGMPPVMP--GMPPGMMP----MGGMM 192
PP+ +P PP G PP PP P G PP P MPP+ P G+PP M P M
Sbjct: 44 PPLMRPP-PPFGMMRGPPP--PPRPPFGRPPFDPNMPPMPPPGGIPPPMGPPHLQRPPFM 100
Query: 193 PPGPGIPPLMPGM--PPGMPPPVPRPGIPPMTQAQAVSAPGILNRPP--------APTAT 242
PP P PGM PPGMPP V PG P + + + + N+ P A T
Sbjct: 101 PPPMSSMPPPPGMMFPPGMPP-VTAPGTPALPPTEEI---WVENKTPDGKVYYYNARTRE 156
Query: 243 VPAPQPPVTK--------PLFPSAGQMGTPVTSSSTASSNSESLS---ASSKALFPSTAQ 291
+P K P+ + Q+ + + A + +++ + A ++A + AQ
Sbjct: 157 SAWTKPDGVKVIQQSELTPMLAAQAQVQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQ 216
Query: 292 AQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKP 351
AQA Q + A + A Q+ A ST +++ PA S ++
Sbjct: 217 AQAQAQAQAQAQAQAQAQAQAQAQAQVQAQVQAQVQAQAVGASTPTTSSPAPAVSTSTSS 276
Query: 352 AT-LTTTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNPPVGPIGGMMPPQP 410
+T +TTS T+ + +S + Q P ++ P + P
Sbjct: 277 STPSSTTSTTTTATSVAQTVSTPTTQDQTPSSAVSVATP-----------TVSVSTPAPT 325
Query: 411 GIPQQQGMRPPMPPHGQYGGHHQGMPGYLPGAMPPYGQGPPMVPPYQGGPPRPPM----- 465
P Q +P H Q +P +P ++P P PP P R P+
Sbjct: 326 ATPVQTVPQP----------HPQTLPPAVPHSVPQPTTAIPAFPPVMVPPFRVPLPGMPI 375
Query: 466 -------GMRPPVM 472
GM PP++
Sbjct: 376 PLPGVLPGMAPPIV 389
Score = 48.5 bits (114), Expect = 1e-05
Identities = 42/122 (34%), Positives = 53/122 (43%), Gaps = 23/122 (18%)
Query: 361 SKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNPPV---GPIGGMM-----PPQP-- 410
S+ +P E L + Q +++ P P G PP+ P GMM PP+P
Sbjct: 11 SERFNPGE---LRMAQQQALRFRGPAPPPNAVMRGPPPLMRPPPPFGMMRGPPPPPRPPF 67
Query: 411 GIPQQQGMRPPMPPHGQYGGHHQGMPGYLPGAMPPYGQGPPMVPPYQGGPPRPPMGMRPP 470
G P PPMPP G G+P P PP+ Q PP +PP P PP M PP
Sbjct: 68 GRPPFDPNMPPMPPPG-------GIP---PPMGPPHLQRPPFMPPPMSSMPPPPGMMFPP 117
Query: 471 VM 472
M
Sbjct: 118 GM 119
Score = 48.1 bits (113), Expect = 2e-05
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 10/81 (12%)
Query: 149 PVPGAPGMPPGIPPLMPGVPPLMPGMPPVMPGMPPGMMPMGGMMPPGPGIPPLMPGMPPG 208
P P +PP +P +P +P PPVM +PP +P+ PG+P +PG+ PG
Sbjct: 333 PQPHPQTLPPAVPHSVPQPTTAIPAFPPVM--VPPFRVPL-------PGMPIPLPGVLPG 383
Query: 209 MPPPVPRPGIPPMTQAQAVSA 229
M PP+ P I P A A
Sbjct: 384 MAPPIV-PMIHPQVAIAASPA 403
Score = 39.3 bits (90), Expect = 0.008
Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
Query: 124 STSFQPQPVQPQQGYIPPMAQPGLP-PVPGAPGMPPG-IPPL---MPGVPPLMPGMPPVM 178
+T Q P QP +PP +P P P PP +PP +PG+P +PG V+
Sbjct: 326 ATPVQTVP-QPHPQTLPPAVPHSVPQPTTAIPAFPPVMVPPFRVPLPGMPIPLPG---VL 381
Query: 179 PGMPPGMMPM 188
PGM P ++PM
Sbjct: 382 PGMAPPIVPM 391
>gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3
[Homo sapiens]
Length = 1125
Score = 83.2 bits (204), Expect = 5e-16
Identities = 104/388 (26%), Positives = 134/388 (34%), Gaps = 86/388 (22%)
Query: 107 KKQQDDSDEYDDDDSAASTSFQPQPVQPQQGYIPPMAQPGLPPVPGAPGMPPGIPPLMPG 166
KK +++ + +++ + P P +P +PP+ P VP PP +PP PG
Sbjct: 635 KKPENEVAQNGGAETSHTEPVSPIP-KPLPVPVPPIPVPAPITVP-----PPQVPPHQPG 688
Query: 167 VPPLMPGMPPVMPGM-PPGMMPMGGMMPP--GPGIPPLMPGMPPGMPPPVPRPGIPPMTQ 223
PPV+ + PP P G+ PP GPG+P PP PPP RPG PM
Sbjct: 689 --------PPVVGALQPPAFTPPLGIPPPGFGPGVP------PPPPPPPFLRPGFNPMH- 733
Query: 224 AQAVSAPGILNRPPAPTATVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSK 283
PG L P P T P PP P + P S A N+E S S
Sbjct: 734 ----LPPGFLPPGPPPPITPPVSIPP------PHTPPISIP-NLVSGARGNAE--SGDSV 780
Query: 284 ALFPSTAQAQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKP 343
++ S A P +P+ S T P P S T A+P
Sbjct: 781 KMYGSAVPPAAPTNLPTPPVTQPV-SLLGTQGVAPGPVIGLQAPS-------TGLLGARP 832
Query: 344 AASITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNPPVGPIG 403
+P + + P P P PP GP G
Sbjct: 833 GLIPLQRPPGMPPPHLQRFPLMPPR------------------PMPPHMMHRGPPPGPGG 874
Query: 404 GMMPPQPGIPQQQGMRPPMPPHGQY----GGHHQGMPGYLPGA-----------MPPYGQ 448
MPP GM+ P PPHG + G G PG PG P Q
Sbjct: 875 FAMPP------PHGMKGPFPPHGPFVRPGGMPGLGGPGPGPGGPEDRDGRQQPPQQPQQQ 928
Query: 449 GPPMVP--PYQGGPPRPPMGMRPPVMSQ 474
P P P Q +PP +PP Q
Sbjct: 929 PQPQAPQQPQQQQQQQPPPSQQPPPTQQ 956
Score = 55.8 bits (133), Expect = 8e-08
Identities = 44/116 (37%), Positives = 49/116 (42%), Gaps = 11/116 (9%)
Query: 131 PVQPQQGYIPPMAQPGLPPVPGAPGMPPGIPPLMPGVPPLMPGMPPVMPGMPPGMMPMGG 190
P+ P + P M G PP PG MPP P M G P P P V PG PG+ G
Sbjct: 852 PLMPPRPMPPHMMHRGPPPGPGGFAMPP--PHGMKG--PFPPHGPFVRPGGMPGL----G 903
Query: 191 MMPPGPGIPPLMPG--MPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTATVP 244
PGPG P G PP P P+P P Q Q P +PP PT P
Sbjct: 904 GPGPGPGGPEDRDGRQQPPQQPQQQPQPQAPQQPQQQQQQQPPPSQQPP-PTQQQP 958
Score = 53.5 bits (127), Expect = 4e-07
Identities = 89/364 (24%), Positives = 117/364 (32%), Gaps = 124/364 (34%)
Query: 120 DSAASTSFQPQPVQPQQGYIPPMAQPGLPPVPGAPGMPPGIPPLMPGVPPLMPGMPPVMP 179
+ A TS +PV P IP +PP+P P P +PP P VPP PG P V
Sbjct: 644 NGGAETS-HTEPVSP----IPKPLPVPVPPIP-VPA-PITVPP--PQVPPHQPGPPVVGA 694
Query: 180 GMPPGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAP 239
PP P P G+PPP PG+PP
Sbjct: 695 LQPPAFTP------------------PLGIPPPGFGPGVPP------------------- 717
Query: 240 TATVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGP 299
P P PP +P F P GP
Sbjct: 718 ----PPPPPPFLRPGFN------------------------------PMHLPPGFLPPGP 743
Query: 300 VGTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTN--STAAKPAA--SITSKPATLT 355
P++ P T P + + A + + +A PAA ++ + P T
Sbjct: 744 PPPITPPVSIPPPHTPPISIPNLVSGARGNAESGDSVKMYGSAVPPAAPTNLPTPPVTQP 803
Query: 356 TTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNPPVGPIGGMMPPQ----PG 411
+ ++ + P I L Q P RPG P+ PP GM PP P
Sbjct: 804 VSLLGTQGVAPGPVIGL-----QAPSTGLLGARPGLIPLQRPP-----GMPPPHLQRFPL 853
Query: 412 IPQQQGMRPPMPPHGQYGGHHQGMPGYLPGAMPPYGQGPPMVPPYQGGPPRPPMGMRPPV 471
+P + PMPPH + G PP G G +PP P GM+ P
Sbjct: 854 MPPR-----PMPPHMMHRG-------------PPPGPGGFAMPP--------PHGMKGPF 887
Query: 472 MSQG 475
G
Sbjct: 888 PPHG 891
Score = 47.0 bits (110), Expect = 4e-05
Identities = 64/260 (24%), Positives = 93/260 (35%), Gaps = 55/260 (21%)
Query: 249 PVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPVGTDFKPLN 308
PV + + + G PV SS + + S + PS+ A Q T + L
Sbjct: 143 PVAENVTNNEGSPPPPVKVSSEPPTQATPNSVPAVPQLPSSDAFAAVAQLFQTTQGQQLQ 202
Query: 309 STPATTTEPPKPTFPAYTQS----TASTTSTTNSTAAKPAASITSKPATLTTTSATSKLI 364
T +PPKP PA + + T+ +T +P+ + P T+ KL+
Sbjct: 203 QILQTFQQPPKPQSPALDNAVMAQVQAITAQLKTTPTQPSEQKAAFPPPEQKTAFDKKLL 262
Query: 365 ----HPDEDISLEERR-------------AQLPKYQRNLPRPGQAPIG---NPPVGPIG- 403
+ DE ++EE + A +P AP PP P G
Sbjct: 263 DRFDYDDEPEAVEESKKEDTTAVTTTAPAAAVPPAPTATVPAAAAPAAASPPPPQAPFGF 322
Query: 404 -GMMPPQPGIPQQQGM-----------------RPPMPPHGQYGGHHQGMPGYLPGAMPP 445
G QP Q Q M + P+PP+GQ MPG+ PP
Sbjct: 323 PGDGMQQPAYTQHQNMDQFQPRMMGIQQDPMHHQVPLPPNGQ-------MPGFGLLPTPP 375
Query: 446 YGQGPPMVPPYQGGPPRPPM 465
+ PPM P PP PP+
Sbjct: 376 F---PPMAQPVI--PPTPPV 390
Score = 40.0 bits (92), Expect = 0.005
Identities = 43/144 (29%), Positives = 56/144 (38%), Gaps = 27/144 (18%)
Query: 98 EQKTQESQKKKQQDDSDEYDD-------DDSAASTSFQPQPVQPQQ--GYIPPMAQPGL- 147
EQKT +K + D D+ + +D+ A T+ P P +P A P
Sbjct: 252 EQKTAFDKKLLDRFDYDDEPEAVEESKKEDTTAVTTTAPAAAVPPAPTATVPAAAAPAAA 311
Query: 148 -PPVPGAPGMPPGIPPLMPGVP---------PLMPG-----MPPVMPGMPPGMMPMGGMM 192
PP P AP PG P P M G M +P P G MP G++
Sbjct: 312 SPPPPQAPFGFPGDGMQQPAYTQHQNMDQFQPRMMGIQQDPMHHQVPLPPNGQMPGFGLL 371
Query: 193 PPGPGIPPLMPGMPPGMPPPVPRP 216
P P P P +PP PPV +P
Sbjct: 372 PTPPFPPMAQPVIPP--TPPVQQP 393
Score = 29.6 bits (65), Expect = 6.3
Identities = 18/43 (41%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 222 TQAQAVSAPGILNRPPAPTATVPAPQPPVTKPLFPSAGQMGTP 264
T A +AP PPAPTATVPA P P G P
Sbjct: 282 TTAVTTTAPAAAV-PPAPTATVPAAAAPAAASPPPPQAPFGFP 323
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 81.6 bits (200), Expect = 1e-15
Identities = 107/386 (27%), Positives = 124/386 (32%), Gaps = 103/386 (26%)
Query: 110 QDDSDEYDDDDSAASTSFQPQPVQPQ-----QGYIPPMAQPGLPPVPGAPGMPPGIPPLM 164
Q+ +++ ++S + + PQ PQ QG PP +P PP P P G PP
Sbjct: 17 QNLNEDVSQEESPSLIAGNPQGPSPQGGNKPQGPPPPPGKPQGPP-PQGGNKPQGPPP-- 73
Query: 165 PGVPPLMPGM------PPVMPGMPPGMMPMGGMMPPGPGIPPLMPGMPP--------GMP 210
PG P P P PG P G P GG P GP PP P PP G P
Sbjct: 74 PGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNRPQGPP 133
Query: 211 PPVPRPGIPPM--TQAQAVSAPGILNRPPAPTATVP-APQPPVTKPLF--PSAGQM---- 261
PP G PP S PG PP P P PP KP P G+
Sbjct: 134 PPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGKKPQGP 193
Query: 262 ---GTPVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPVGTDFKPLNSTPATTTEPP 318
G P + S S K P Q QGP KP P +P
Sbjct: 194 PPPGKPQGPPPQGDKSRSSQSPPGKPQGP-PPQGGNQPQGPPPPPGKPQGPPPQGGNKPQ 252
Query: 319 KPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSATSKLIHPDEDISLEERRAQ 378
P P Q + + + +A P + Q
Sbjct: 253 GPPPPGKPQGPPAQGGSKSQSARSPPG------------------------------KPQ 282
Query: 379 LPKYQRNLPRPGQAPIGNPPVGPIGGMMPPQPGIPQQQGMRPPMPPHGQYGGHHQGMPGY 438
P Q GN P GP PP G PQQ P PP GQ
Sbjct: 283 GPPQQE----------GNNPQGP----PPPAGGNPQQ----PQAPPAGQ----------- 313
Query: 439 LPGAMPPYGQGPPMVPPYQGGPPRPP 464
QGPP PP G P RPP
Sbjct: 314 --------PQGPPR-PPQGGRPSRPP 330
Score = 81.3 bits (199), Expect = 2e-15
Identities = 94/322 (29%), Positives = 103/322 (31%), Gaps = 51/322 (15%)
Query: 175 PPVMPGMPPGMMPMGGMMPPGPGIPPLMPGMPP--------GMPPPVPRPGIPPM--TQA 224
P ++ G P G P GG P GP PP P PP G PPP G PP
Sbjct: 29 PSLIAGNPQGPSPQGGNKPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSR 88
Query: 225 QAVSAPGILNRPPAPTATVP-APQPPVTKPLFP---------SAGQMGTPVTSSSTASSN 274
S PG PP P P PP KP P G P +
Sbjct: 89 SPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNRPQGPPPPGKPQGPPPQGDKS 148
Query: 275 SESLSASSKALFPSTAQAQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTS 334
S K P Q QGP KP P +P P P Q
Sbjct: 149 RSPRSPPGKPQGP-PPQGGNQPQGPPPPPGKPQGPPPQGGKKPQGPPPPGKPQGPPPQGD 207
Query: 335 TTNSTAAKPAASITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPI 394
+ S+ + P KP P K Q P+ G P
Sbjct: 208 KSRSSQSPP-----GKPQGPPPQGGNQPQGPPPPP----------GKPQGPPPQGGNKPQ 252
Query: 395 GNPPVGPIGGMMPPQPGIPQQQGMRPPMPPHG---QYGGHHQGMPGYLPGAMPPYGQGP- 450
G PP G G P Q G Q PP P G Q G + QG P PP G P
Sbjct: 253 GPPPPGKPQG-PPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPP-------PPAGGNPQ 304
Query: 451 -PMVPP--YQGGPPRPPMGMRP 469
P PP GPPRPP G RP
Sbjct: 305 QPQAPPAGQPQGPPRPPQGGRP 326
Score = 54.3 bits (129), Expect = 2e-07
Identities = 48/134 (35%), Positives = 51/134 (38%), Gaps = 14/134 (10%)
Query: 108 KQQDDSDEYDDDDSAASTSFQPQPVQPQQGYIPPMAQPGLPPVPGAPGMPPGIPPLMPGV 167
K Q + D S+ S +PQ PQ G P G PP PG P PP P
Sbjct: 198 KPQGPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQ----GPPPPPGKPQGPPPQGGNKPQG 253
Query: 168 PPLMPGMPPVMPGMPP---GMMPMGGMMPPG-PGIPPLMPGMPPGMPPPVPRPGIPPMTQ 223
PP PP P PP G PPG P PP G P PPP P G P Q
Sbjct: 254 PP-----PPGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPP-PAGGNPQQPQ 307
Query: 224 AQAVSAPGILNRPP 237
A P RPP
Sbjct: 308 APPAGQPQGPPRPP 321
Score = 46.6 bits (109), Expect = 5e-05
Identities = 43/124 (34%), Positives = 49/124 (39%), Gaps = 15/124 (12%)
Query: 359 ATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNPPVGPIGGMMPPQPGIPQ---- 414
A S + +ED+S EE P P+ GN P GP PP PG PQ
Sbjct: 12 ALSSAQNLNEDVSQEES----PSLIAGNPQGPSPQGGNKPQGP-----PPPPGKPQGPPP 62
Query: 415 QQGMRP--PMPPHGQYGGHHQGMPGYLPGAMPPYGQGPPMVPPYQGGPPRPPMGMRPPVM 472
Q G +P P PP G QG P + P QGPP Q P PP G
Sbjct: 63 QGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPP 122
Query: 473 SQGG 476
QGG
Sbjct: 123 PQGG 126
Score = 45.4 bits (106), Expect = 1e-04
Identities = 37/108 (34%), Positives = 44/108 (40%), Gaps = 11/108 (10%)
Query: 376 RAQLPKYQRNLPRPGQAPIGNPPVGPIGGMMPPQPGIPQ----QQGMRP--PMPPHGQYG 429
+++ P+ P+ GN P GP PP PG PQ Q G RP P PP G
Sbjct: 86 KSRSPRSPPGKPQGPPPQGGNQPQGP-----PPPPGKPQGPPPQGGNRPQGPPPPGKPQG 140
Query: 430 GHHQGMPGYLPGAMPPYGQGPPMVPPYQGGPPRPPMGMRPPVMSQGGR 477
QG P + P QGPP Q P PP G QGG+
Sbjct: 141 PPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGK 188
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 80.9 bits (198), Expect = 2e-15
Identities = 107/426 (25%), Positives = 148/426 (34%), Gaps = 107/426 (25%)
Query: 117 DDDDSAASTSFQPQPVQPQQGYIPPMAQPGLPPVPGAPGMPPGIPPLMPG-------VPP 169
D SF+P P GY PM P PG PP P L PG PP
Sbjct: 173 DSTPRQPEASFEPHPSVTPTGYHAPMEPPTSRMFQAPPGAPPPHPQLYPGGTGGVLSGPP 232
Query: 170 LMP-----------------GMPPVMP---------GMPPGMMPM----GGMMPPGPGIP 199
+ P PP P G PP P GG +P P P
Sbjct: 233 MGPKGGGAASSVGGPNGGKQHPPPTTPISVSSSGASGAPPTKPPTTPVGGGNLPSAPP-P 291
Query: 200 PLMPGMPPGMPPP------------------------VPRP--------GIPPMTQAQAV 227
P + P +PPP +P P G+PP +
Sbjct: 292 ANFPHVTPNLPPPPALRPLNNASASPPGLGAQPLPGHLPSPHAMGQGMGGLPPGPEKGPT 351
Query: 228 SAPGILNRPPAPTATVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKALFP 287
AP + PPA ++ AP PP+ P S +SSS A+S+S S S+SS + FP
Sbjct: 352 LAPSPHSLPPASSS---APAPPMRFPYSSS--------SSSSAAASSSSSSSSSSASPFP 400
Query: 288 STAQAQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAY-TQSTASTTSTTNSTAAKPAAS 346
+ +QA P F P S + + +PPK T P+ +Q+ S + A+
Sbjct: 401 A---SQALPSYP--HSFPPPTSL-SVSNQPPKYTQPSLPSQAVWSQGPPPPPPYGRLLAN 454
Query: 347 ITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNPPVGPIGGMM 406
+ P ++ HP + Q + Q+ + Q + GP
Sbjct: 455 SNAHPGPFPPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQQQQQHHGNSGP----- 509
Query: 407 PPQPGIPQQQGMRPPMPPHGQYGGHHQGMPGYLPGAMPPYGQGPPMVPP-------YQGG 459
PP P P+ + H M L G++ PY GP +PP Q G
Sbjct: 510 PPPGAFPH------PLEGGSSHHAHPYAMSPSL-GSLRPYPPGPAHLPPPHSQVSYSQAG 562
Query: 460 PPRPPM 465
P PP+
Sbjct: 563 PNGPPV 568
Score = 70.9 bits (172), Expect = 2e-12
Identities = 100/415 (24%), Positives = 141/415 (33%), Gaps = 55/415 (13%)
Query: 83 EGIPEKDMDERRRLLEQKT-QESQKKKQQDDSDEYDDDDSAASTSFQPQPV-QPQQGYIP 140
E I E + +E + KT QE + + D D D S P+ + Q + P
Sbjct: 74 EEISESESEETNAPKKTKTEQELPRPQSPSDLDSLDGRSLNDDGSSDPRDIDQDNRSTSP 133
Query: 141 PMAQPG-----------LPPVPGAPGMPPGIPPLMPGVPPLMPGMPPVMPGMPPGMMPMG 189
+ PG L P P PP + P P P P P P + P G
Sbjct: 134 SIYSPGSVENDSDSSSGLSQGPARPYHPPPLFPPSPQPPDSTPRQPEASFEPHPSVTPTG 193
Query: 190 GMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTATVPAP--- 246
P P + PPG PP P P + P +S P + + ++V P
Sbjct: 194 YHAPMEPPTSRMFQA-PPGAPP--PHPQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNGG 250
Query: 247 --QPPVTKPL-FPSAGQMGTPVTSSSTASSNSESL-SASSKALF----------PSTAQA 292
PP T P+ S+G G P T T +L SA A F P+
Sbjct: 251 KQHPPPTTPISVSSSGASGAPPTKPPTTPVGGGNLPSAPPPANFPHVTPNLPPPPALRPL 310
Query: 293 QAAVQGPVGTDFKPLNS---TPATTTE-----PPKPTFPAYTQSTASTTSTTNSTAAKPA 344
A P G +PL +P + PP P + + +S+A P
Sbjct: 311 NNASASPPGLGAQPLPGHLPSPHAMGQGMGGLPPGPEKGPTLAPSPHSLPPASSSAPAPP 370
Query: 345 ASITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNPPVGPIGG 404
++ ++ +A+S S LP Y + P P + N P
Sbjct: 371 MRFPYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPHSFPPPTSLSVSNQP------ 424
Query: 405 MMPPQPGIPQQ----QGMRPPMPPHGQYGGHHQGMPGYLPGAMPPYGQGPPMVPP 455
QP +P Q QG PP PP+G+ + PG P P G PP
Sbjct: 425 PKYTQPSLPSQAVWSQG-PPPPPPYGRLLANSNAHPGPFP---PSTGAQSTAHPP 475
Score = 63.9 bits (154), Expect = 3e-10
Identities = 100/427 (23%), Positives = 140/427 (32%), Gaps = 103/427 (24%)
Query: 140 PPMAQPGLPPVPGAPGMPPGIPPLMPGVPPLMPGMPP------VMPGMPP--GMMPMGGM 191
PP P GA G PP PP P +P PP V P +PP + P+
Sbjct: 254 PPPTTPISVSSSGASGAPPTKPPTTPVGGGNLPSAPPPANFPHVTPNLPPPPALRPLNNA 313
Query: 192 M--PPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTATVPAPQPP 249
PPG G PL +P G+PP + AP + PPA ++ AP PP
Sbjct: 314 SASPPGLGAQPLPGHLPSPHAMGQGMGGLPPGPEKGPTLAPSPHSLPPASSS---APAPP 370
Query: 250 VTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKAL------FPSTAQAQAAVQGPVGTD 303
+ P + S+ +SSS++SS+S S +S+AL FP + Q P T
Sbjct: 371 MRFP-YSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPHSFPPPTSLSVSNQPPKYTQ 429
Query: 304 FKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSATSKL 363
L S + PP P P Y + A++ + A T+ P +T
Sbjct: 430 -PSLPSQAVWSQGPPPP--PPYGRLLANSNAHPGPFPPSTGAQSTAHPPV-----STHHH 481
Query: 364 IHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNPP---------------VGPIGGMMPP 408
H + ++++ Q + Q++ G P G P + P G + P
Sbjct: 482 HHQQQQQQQQQQQQQQQQQQQHHGNSGPPPPGAFPHPLEGGSSHHAHPYAMSPSLGSLRP 541
Query: 409 QPGIPQQ-------------------------------QGMRP---PMPPHGQYGGHHQG 434
P P QG P P P G G +
Sbjct: 542 YPPGPAHLPPPHSQVSYSQAGPNGPPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPYPF 601
Query: 435 MP-----------------------GYL---PGAMPPYGQGPPMVPPYQGGPPRPPMGMR 468
P GY P PPYG+ P Y+ P
Sbjct: 602 PPVPTVTTSSATLSTVIATVASSPAGYKTASPPGPPPYGKRAPSPGAYKTATPPGYKPGS 661
Query: 469 PPVMSQG 475
PP G
Sbjct: 662 PPSFRTG 668
Score = 63.2 bits (152), Expect = 5e-10
Identities = 70/260 (26%), Positives = 91/260 (35%), Gaps = 52/260 (20%)
Query: 206 PPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTATVPAPQPPVTKPLFPSAGQMGTPV 265
PPG P G A+S P + + P P P PP ++ + AG G PV
Sbjct: 511 PPGAFPHPLEGGSSHHAHPYAMS-PSLGSLRPYPPGPAHLP-PPHSQVSYSQAGPNGPPV 568
Query: 266 TSSSTASSNSESLSASSKALFPSTAQAQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAY 325
+SSS +SS++ S PS QGP G + P P P
Sbjct: 569 SSSSNSSSSTSQGSYPCSHPSPS--------QGPQGAPY-------------PFPPVPTV 607
Query: 326 TQSTASTTSTTNSTAAKPAASITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRN 385
T S+A+ ++ + A+ PA T+ P P Y +
Sbjct: 608 TTSSATLSTVIATVASSPAGYKTASP-------------------------PGPPPYGKR 642
Query: 386 LPRPGQAPIGNPPVGPIGGMMPPQPGIPQQQGMRPPMPPHGQYGGHHQGMPGYLPGAMPP 445
P PG PP G PP G R PP G G G P PG +PP
Sbjct: 643 APSPGAYKTATPPGYKPGS--PPSFRTGTPPGYRGTSPPAGP-GTFKPGSPTVGPGPLPP 699
Query: 446 YG-QGPPMVPPYQGGPPRPP 464
G G P +PP P P
Sbjct: 700 AGPSGLPSLPPPPAAPASGP 719
Score = 57.0 bits (136), Expect = 4e-08
Identities = 84/349 (24%), Positives = 124/349 (35%), Gaps = 30/349 (8%)
Query: 121 SAASTSFQPQPVQPQQGYIPPMAQPGLP-PVPGAPGMPPGIPPLMPGVPPLMPGMPPVMP 179
S+ S+S Q P P G P P P P + L + +
Sbjct: 571 SSNSSSSTSQGSYPCSHPSPSQGPQGAPYPFPPVPTVTTSSATLSTVIATVASSPAGYKT 630
Query: 180 GMPPGMMPMGGMMP-PGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPA 238
PPG P G P PG PG PG PP R G PP + + A +P +
Sbjct: 631 ASPPGPPPYGKRAPSPGAYKTATPPGYKPGSPPSF-RTGTPPGYRGTSPPAGPGTFKPGS 689
Query: 239 PTATVPAPQPPV------TKPLFPSAGQMGTPVTSSSTASSNSESLSASSKALFPSTAQA 292
PT P P PP + P P+A G P++++ +E + P A
Sbjct: 690 PTVG-PGPLPPAGPSGLPSLPPPPAAPASGPPLSATQIKQEPAEEYETPESPVPP----A 744
Query: 293 QAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPA 352
++ P D S A + F + +S S AK A + K
Sbjct: 745 RSPSPPPKVVDVPSHASQSARFNKHLDRGFNSCARSDLYFVPLEGSKLAKKRADLVEKVR 804
Query: 353 TLTTTSATS-KLIHPDEDISLEERRAQLPKYQRN--LPRPGQAPIGNPPVGPIGGMMPPQ 409
A K + + E R + + +R+ L + G+AP+ P +GP+ P +
Sbjct: 805 REAEQRAREEKEREREREREKEREREKERELERSVKLAQEGRAPVECPSLGPVPHRPPFE 864
Query: 410 PG-----IPQQQGM-RPPMPPHGQYGGHHQGMPG------YLP-GAMPP 445
PG +P G P + +Y H PG Y+P GA+ P
Sbjct: 865 PGSAVATVPPYLGPDTPALRTLSEYARPHVMSPGNRNHPFYVPLGAVDP 913
Score = 32.0 bits (71), Expect = 1.3
Identities = 48/218 (22%), Positives = 78/218 (35%), Gaps = 75/218 (34%)
Query: 90 MDERRRLLEQKTQESQKKKQQDDSDEYDDDDSAASTSFQPQPVQPQQGYIPPMAQPGLPP 149
+++ RR EQ+ +E ++++++ + ++ + + + V+ Q P+ P L P
Sbjct: 800 VEKVRREAEQRAREEKEREREREREKEREREKERELE---RSVKLAQEGRAPVECPSLGP 856
Query: 150 VPGAPGMPPG-----IPPLM-PGVPPLMP----GMPPVM-PGMP--PGMMPMGGMMP--- 193
VP P PG +PP + P P L P VM PG P +P+G + P
Sbjct: 857 VPHRPPFEPGSAVATVPPYLGPDTPALRTLSEYARPHVMSPGNRNHPFYVPLGAVDPGLL 916
Query: 194 -----------------------------------------------PGPGIPP------ 200
PGPG+ P
Sbjct: 917 GYNVPALYSSDPAAREREREARERDLRDRLKPGFEVKPSELEPLHGVPGPGLDPFPRHGG 976
Query: 201 --LMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRP 236
L PG PPG+ P P + P+ + + A G RP
Sbjct: 977 LALQPG-PPGLHPFPFHPSLGPLERERLALAAGPALRP 1013
>gi|55750041 atrophin-1 [Homo sapiens]
Length = 1190
Score = 80.9 bits (198), Expect = 2e-15
Identities = 107/426 (25%), Positives = 148/426 (34%), Gaps = 107/426 (25%)
Query: 117 DDDDSAASTSFQPQPVQPQQGYIPPMAQPGLPPVPGAPGMPPGIPPLMPG-------VPP 169
D SF+P P GY PM P PG PP P L PG PP
Sbjct: 173 DSTPRQPEASFEPHPSVTPTGYHAPMEPPTSRMFQAPPGAPPPHPQLYPGGTGGVLSGPP 232
Query: 170 LMP-----------------GMPPVMP---------GMPPGMMPM----GGMMPPGPGIP 199
+ P PP P G PP P GG +P P P
Sbjct: 233 MGPKGGGAASSVGGPNGGKQHPPPTTPISVSSSGASGAPPTKPPTTPVGGGNLPSAPP-P 291
Query: 200 PLMPGMPPGMPPP------------------------VPRP--------GIPPMTQAQAV 227
P + P +PPP +P P G+PP +
Sbjct: 292 ANFPHVTPNLPPPPALRPLNNASASPPGLGAQPLPGHLPSPHAMGQGMGGLPPGPEKGPT 351
Query: 228 SAPGILNRPPAPTATVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKALFP 287
AP + PPA ++ AP PP+ P S +SSS A+S+S S S+SS + FP
Sbjct: 352 LAPSPHSLPPASSS---APAPPMRFPYSSS--------SSSSAAASSSSSSSSSSASPFP 400
Query: 288 STAQAQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAY-TQSTASTTSTTNSTAAKPAAS 346
+ +QA P F P S + + +PPK T P+ +Q+ S + A+
Sbjct: 401 A---SQALPSYP--HSFPPPTSL-SVSNQPPKYTQPSLPSQAVWSQGPPPPPPYGRLLAN 454
Query: 347 ITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNPPVGPIGGMM 406
+ P ++ HP + Q + Q+ + Q + GP
Sbjct: 455 SNAHPGPFPPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQQQQQHHGNSGP----- 509
Query: 407 PPQPGIPQQQGMRPPMPPHGQYGGHHQGMPGYLPGAMPPYGQGPPMVPP-------YQGG 459
PP P P+ + H M L G++ PY GP +PP Q G
Sbjct: 510 PPPGAFPH------PLEGGSSHHAHPYAMSPSL-GSLRPYPPGPAHLPPPHSQVSYSQAG 562
Query: 460 PPRPPM 465
P PP+
Sbjct: 563 PNGPPV 568
Score = 70.9 bits (172), Expect = 2e-12
Identities = 100/415 (24%), Positives = 141/415 (33%), Gaps = 55/415 (13%)
Query: 83 EGIPEKDMDERRRLLEQKT-QESQKKKQQDDSDEYDDDDSAASTSFQPQPV-QPQQGYIP 140
E I E + +E + KT QE + + D D D S P+ + Q + P
Sbjct: 74 EEISESESEETNAPKKTKTEQELPRPQSPSDLDSLDGRSLNDDGSSDPRDIDQDNRSTSP 133
Query: 141 PMAQPG-----------LPPVPGAPGMPPGIPPLMPGVPPLMPGMPPVMPGMPPGMMPMG 189
+ PG L P P PP + P P P P P P + P G
Sbjct: 134 SIYSPGSVENDSDSSSGLSQGPARPYHPPPLFPPSPQPPDSTPRQPEASFEPHPSVTPTG 193
Query: 190 GMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTATVPAP--- 246
P P + PPG PP P P + P +S P + + ++V P
Sbjct: 194 YHAPMEPPTSRMFQA-PPGAPP--PHPQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNGG 250
Query: 247 --QPPVTKPL-FPSAGQMGTPVTSSSTASSNSESL-SASSKALF----------PSTAQA 292
PP T P+ S+G G P T T +L SA A F P+
Sbjct: 251 KQHPPPTTPISVSSSGASGAPPTKPPTTPVGGGNLPSAPPPANFPHVTPNLPPPPALRPL 310
Query: 293 QAAVQGPVGTDFKPLNS---TPATTTE-----PPKPTFPAYTQSTASTTSTTNSTAAKPA 344
A P G +PL +P + PP P + + +S+A P
Sbjct: 311 NNASASPPGLGAQPLPGHLPSPHAMGQGMGGLPPGPEKGPTLAPSPHSLPPASSSAPAPP 370
Query: 345 ASITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNPPVGPIGG 404
++ ++ +A+S S LP Y + P P + N P
Sbjct: 371 MRFPYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPHSFPPPTSLSVSNQP------ 424
Query: 405 MMPPQPGIPQQ----QGMRPPMPPHGQYGGHHQGMPGYLPGAMPPYGQGPPMVPP 455
QP +P Q QG PP PP+G+ + PG P P G PP
Sbjct: 425 PKYTQPSLPSQAVWSQG-PPPPPPYGRLLANSNAHPGPFP---PSTGAQSTAHPP 475
Score = 63.9 bits (154), Expect = 3e-10
Identities = 100/427 (23%), Positives = 140/427 (32%), Gaps = 103/427 (24%)
Query: 140 PPMAQPGLPPVPGAPGMPPGIPPLMPGVPPLMPGMPP------VMPGMPP--GMMPMGGM 191
PP P GA G PP PP P +P PP V P +PP + P+
Sbjct: 254 PPPTTPISVSSSGASGAPPTKPPTTPVGGGNLPSAPPPANFPHVTPNLPPPPALRPLNNA 313
Query: 192 M--PPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTATVPAPQPP 249
PPG G PL +P G+PP + AP + PPA ++ AP PP
Sbjct: 314 SASPPGLGAQPLPGHLPSPHAMGQGMGGLPPGPEKGPTLAPSPHSLPPASSS---APAPP 370
Query: 250 VTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKAL------FPSTAQAQAAVQGPVGTD 303
+ P + S+ +SSS++SS+S S +S+AL FP + Q P T
Sbjct: 371 MRFP-YSSSSSSSAAASSSSSSSSSSASPFPASQALPSYPHSFPPPTSLSVSNQPPKYTQ 429
Query: 304 FKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSATSKL 363
L S + PP P P Y + A++ + A T+ P +T
Sbjct: 430 -PSLPSQAVWSQGPPPP--PPYGRLLANSNAHPGPFPPSTGAQSTAHPPV-----STHHH 481
Query: 364 IHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNPP---------------VGPIGGMMPP 408
H + ++++ Q + Q++ G P G P + P G + P
Sbjct: 482 HHQQQQQQQQQQQQQQQQQQQHHGNSGPPPPGAFPHPLEGGSSHHAHPYAMSPSLGSLRP 541
Query: 409 QPGIPQQ-------------------------------QGMRP---PMPPHGQYGGHHQG 434
P P QG P P P G G +
Sbjct: 542 YPPGPAHLPPPHSQVSYSQAGPNGPPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPYPF 601
Query: 435 MP-----------------------GYL---PGAMPPYGQGPPMVPPYQGGPPRPPMGMR 468
P GY P PPYG+ P Y+ P
Sbjct: 602 PPVPTVTTSSATLSTVIATVASSPAGYKTASPPGPPPYGKRAPSPGAYKTATPPGYKPGS 661
Query: 469 PPVMSQG 475
PP G
Sbjct: 662 PPSFRTG 668
Score = 63.2 bits (152), Expect = 5e-10
Identities = 70/260 (26%), Positives = 91/260 (35%), Gaps = 52/260 (20%)
Query: 206 PPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTATVPAPQPPVTKPLFPSAGQMGTPV 265
PPG P G A+S P + + P P P PP ++ + AG G PV
Sbjct: 511 PPGAFPHPLEGGSSHHAHPYAMS-PSLGSLRPYPPGPAHLP-PPHSQVSYSQAGPNGPPV 568
Query: 266 TSSSTASSNSESLSASSKALFPSTAQAQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAY 325
+SSS +SS++ S PS QGP G + P P P
Sbjct: 569 SSSSNSSSSTSQGSYPCSHPSPS--------QGPQGAPY-------------PFPPVPTV 607
Query: 326 TQSTASTTSTTNSTAAKPAASITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRN 385
T S+A+ ++ + A+ PA T+ P P Y +
Sbjct: 608 TTSSATLSTVIATVASSPAGYKTASP-------------------------PGPPPYGKR 642
Query: 386 LPRPGQAPIGNPPVGPIGGMMPPQPGIPQQQGMRPPMPPHGQYGGHHQGMPGYLPGAMPP 445
P PG PP G PP G R PP G G G P PG +PP
Sbjct: 643 APSPGAYKTATPPGYKPGS--PPSFRTGTPPGYRGTSPPAGP-GTFKPGSPTVGPGPLPP 699
Query: 446 YG-QGPPMVPPYQGGPPRPP 464
G G P +PP P P
Sbjct: 700 AGPSGLPSLPPPPAAPASGP 719
Score = 57.0 bits (136), Expect = 4e-08
Identities = 84/349 (24%), Positives = 124/349 (35%), Gaps = 30/349 (8%)
Query: 121 SAASTSFQPQPVQPQQGYIPPMAQPGLP-PVPGAPGMPPGIPPLMPGVPPLMPGMPPVMP 179
S+ S+S Q P P G P P P P + L + +
Sbjct: 571 SSNSSSSTSQGSYPCSHPSPSQGPQGAPYPFPPVPTVTTSSATLSTVIATVASSPAGYKT 630
Query: 180 GMPPGMMPMGGMMP-PGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPA 238
PPG P G P PG PG PG PP R G PP + + A +P +
Sbjct: 631 ASPPGPPPYGKRAPSPGAYKTATPPGYKPGSPPSF-RTGTPPGYRGTSPPAGPGTFKPGS 689
Query: 239 PTATVPAPQPPV------TKPLFPSAGQMGTPVTSSSTASSNSESLSASSKALFPSTAQA 292
PT P P PP + P P+A G P++++ +E + P A
Sbjct: 690 PTVG-PGPLPPAGPSGLPSLPPPPAAPASGPPLSATQIKQEPAEEYETPESPVPP----A 744
Query: 293 QAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPA 352
++ P D S A + F + +S S AK A + K
Sbjct: 745 RSPSPPPKVVDVPSHASQSARFNKHLDRGFNSCARSDLYFVPLEGSKLAKKRADLVEKVR 804
Query: 353 TLTTTSATS-KLIHPDEDISLEERRAQLPKYQRN--LPRPGQAPIGNPPVGPIGGMMPPQ 409
A K + + E R + + +R+ L + G+AP+ P +GP+ P +
Sbjct: 805 REAEQRAREEKEREREREREKEREREKERELERSVKLAQEGRAPVECPSLGPVPHRPPFE 864
Query: 410 PG-----IPQQQGM-RPPMPPHGQYGGHHQGMPG------YLP-GAMPP 445
PG +P G P + +Y H PG Y+P GA+ P
Sbjct: 865 PGSAVATVPPYLGPDTPALRTLSEYARPHVMSPGNRNHPFYVPLGAVDP 913
Score = 32.0 bits (71), Expect = 1.3
Identities = 48/218 (22%), Positives = 78/218 (35%), Gaps = 75/218 (34%)
Query: 90 MDERRRLLEQKTQESQKKKQQDDSDEYDDDDSAASTSFQPQPVQPQQGYIPPMAQPGLPP 149
+++ RR EQ+ +E ++++++ + ++ + + + V+ Q P+ P L P
Sbjct: 800 VEKVRREAEQRAREEKEREREREREKEREREKERELE---RSVKLAQEGRAPVECPSLGP 856
Query: 150 VPGAPGMPPG-----IPPLM-PGVPPLMP----GMPPVM-PGMP--PGMMPMGGMMP--- 193
VP P PG +PP + P P L P VM PG P +P+G + P
Sbjct: 857 VPHRPPFEPGSAVATVPPYLGPDTPALRTLSEYARPHVMSPGNRNHPFYVPLGAVDPGLL 916
Query: 194 -----------------------------------------------PGPGIPP------ 200
PGPG+ P
Sbjct: 917 GYNVPALYSSDPAAREREREARERDLRDRLKPGFEVKPSELEPLHGVPGPGLDPFPRHGG 976
Query: 201 --LMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRP 236
L PG PPG+ P P + P+ + + A G RP
Sbjct: 977 LALQPG-PPGLHPFPFHPSLGPLERERLALAAGPALRP 1013
>gi|116284392 mucin 2 precursor [Homo sapiens]
Length = 5179
Score = 79.0 bits (193), Expect = 9e-15
Identities = 82/309 (26%), Positives = 104/309 (33%), Gaps = 33/309 (10%)
Query: 131 PVQPQQGYIPPMAQPGLPPVPGAPGMPPGIPPLMPGVPPLMPG-----MPPVMPGMPPGM 185
P P PP P PP PP P P P+ P +PP PP
Sbjct: 1470 PSPPTTTPSPPTTTPS-PPTTTTTTPPPTTTPSPPTTTPITPPASTTTLPPTTTPSPPTT 1528
Query: 186 M---PMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTAT 242
P P P P+ P PP P PP T + P P PT T
Sbjct: 1529 TTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTT----TTTPPPTTTPSPPTTT 1584
Query: 243 VPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPVGT 302
P+P P +T P P T+++T + + S P T P T
Sbjct: 1585 TPSP-PTITTTTPPPTTTPSPPTTTTTTPPPTT---TPSPPTTTPITPPTSTTTLPPTTT 1640
Query: 303 DFKPLNSTPATTTEPPKPTFPA----YTQSTASTTSTTNSTAAKPAASITSKPATLTTTS 358
P P TTT PP T P+ T S TT+TT P++ IT+ P+ TTT
Sbjct: 1641 PSPP----PTTTTTPPPTTTPSPPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTM 1696
Query: 359 AT-SKLIHPDEDISLEERRAQL-----PKYQRNLPRPGQAPIGNPPVGPIGGMMPPQPGI 412
T S P I+ + P P P P +PP + + P
Sbjct: 1697 TTPSPTTTPSSPITTTTTPSSTTTPSPPPTTMTTPSPTTTP--SPPTTTMTTLPPTTTSS 1754
Query: 413 PQQQGMRPP 421
P PP
Sbjct: 1755 PLTTTPLPP 1763
Score = 78.2 bits (191), Expect = 2e-14
Identities = 74/291 (25%), Positives = 96/291 (32%), Gaps = 29/291 (9%)
Query: 140 PPMAQPGLPPVPGAPGMPPGIPPLMPGVPPLMPGMPPVMPGMPPGMMPMGGMMPPGPGIP 199
PP P PP +PP P P P PP PP + P P
Sbjct: 1401 PPTTTPSPPPT-STTTLPPTTTPSPPTTTTTTP--PPTTTPSPP----ITTTTTPPPTTT 1453
Query: 200 PLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPG---ILNRPPAPTATVPAPQPPVTKPLFP 256
P P PPP P P T + + P P PT T P PP T P+ P
Sbjct: 1454 PSPPISTTTTPPPTTTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTT---PSPPTTTPITP 1510
Query: 257 SAGQMGTPVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPVGTDFKPLNSTPA---T 313
A P T++ + + + + + P T + P T P +TP+ T
Sbjct: 1511 PASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPTT---TPITPPTSTTTLPPTTTPSPPPT 1567
Query: 314 TTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSATSKLIHPDEDISLE 373
TT P PT +T + + T +T P + S P T TTT + P +
Sbjct: 1568 TTTTPPPTTTPSPPTTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPIT 1627
Query: 374 ERRAQLPKYQRNLPRPGQAPIGNPPVGPIGGMMPPQPGIPQQQGMRPPMPP 424
P LP P P P PP P P PP
Sbjct: 1628 P-----PTSTTTLP-----PTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPP 1668
Score = 69.3 bits (168), Expect = 7e-12
Identities = 65/237 (27%), Positives = 83/237 (35%), Gaps = 19/237 (8%)
Query: 140 PPMAQPGLPPVPGA---PGMPPGIPPLMPGVPPLMPGMPPVMPGMPPGMMPMGGMMPPGP 196
PP P PP P P PP PP P P P P P P
Sbjct: 1541 PPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPP--PTTTPSPPTTTTPSPPTITTTTPPP 1598
Query: 197 GIPPLMPGMPPGMPPPVPRPGIP---PMTQAQAVSA--PGILNRPPAPTATVPAPQPPVT 251
P P PPP P P P+T + + P PP T T P PP T
Sbjct: 1599 TTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTP---PPTT 1655
Query: 252 KPLFPSAGQMGTPVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPVGTDFKPLNST- 310
P P+ P+T+++T + S + PS P T P+ +T
Sbjct: 1656 TPSPPTTTTPSPPITTTTTPPPTTTPSSPITTT--PSPPTTTMTTPSPTTTPSSPITTTT 1713
Query: 311 -PATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSATSKLIHP 366
P++TT P P T S +T S +T + TS P LTTT + P
Sbjct: 1714 TPSSTTTPSPPPTTMTTPSPTTTPSPPTTTMTTLPPTTTSSP--LTTTPLPPSITPP 1768
Score = 67.8 bits (164), Expect = 2e-11
Identities = 64/247 (25%), Positives = 83/247 (33%), Gaps = 28/247 (11%)
Query: 124 STSFQPQPVQPQQGYIPPMAQPGLPPVPGAPGMPPGIPPLMPGVPPLMPGMPPVMPGMPP 183
ST+ P P PP PP P P P P + P PP PP
Sbjct: 1552 STTTLPPTTTPS----PPPTTTTTPPPTTTPSPPTTTTPSPPTITTTTP--PPTTTPSPP 1605
Query: 184 GMM---PMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPT 240
P P P P+ P PP P PP T + P P PT
Sbjct: 1606 TTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTT----TTTPPPTTTPSPPT 1661
Query: 241 ATVPAPQ-------PPVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKALFPSTAQAQ 293
T P+P PP T P P P T+ +T S + S + +T +
Sbjct: 1662 TTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTT----TPSSPITTTTTPSS 1717
Query: 294 AAVQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPAT 353
P T +TP+ TT P PT T +T+S +T P+ + +
Sbjct: 1718 TTTPSPPPTTM----TTPSPTTTPSPPTTTMTTLPPTTTSSPLTTTPLPPSITPPTFSPF 1773
Query: 354 LTTTSAT 360
TTT T
Sbjct: 1774 STTTPTT 1780
Score = 63.5 bits (153), Expect = 4e-10
Identities = 65/254 (25%), Positives = 83/254 (32%), Gaps = 48/254 (18%)
Query: 196 PGIPPLMPGMPP-------------------GMPPPVPRPGIPPMTQAQAVSAPGILNRP 236
P P P PP PPP P PP+T P P
Sbjct: 1399 PSPPTTTPSPPPTSTTTLPPTTTPSPPTTTTTTPPPTTTPS-PPIT-TTTTPPPTTTPSP 1456
Query: 237 PAPTATVP----APQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKALFPSTAQA 292
P T T P P PP T P P+ TP ++T ++ + + S P T A
Sbjct: 1457 PISTTTTPPPTTTPSPPTTTPSPPTT----TPSPPTTTTTTPPPTTTPSPPTTTPITPPA 1512
Query: 293 QAAVQGPVGTDFKP--LNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSK 350
P T P +TP TT P PT T T++TT +T + P + T+
Sbjct: 1513 STTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTP 1572
Query: 351 PATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNPPVGPIGGMMPPQP 410
P T T + T+ P P P P P +PP PP
Sbjct: 1573 PPTTTPSPPTTTTPSP-------------PTITTTTPPPTTTP--SPPTTTT--TTPPPT 1615
Query: 411 GIPQQQGMRPPMPP 424
P P PP
Sbjct: 1616 TTPSPPTTTPITPP 1629
Score = 56.6 bits (135), Expect = 5e-08
Identities = 56/213 (26%), Positives = 73/213 (34%), Gaps = 24/213 (11%)
Query: 125 TSFQPQPVQPQQGYIPPMAQPGLPPVPGAPGMPPGIPPLMPGVPPLMPG-----MPPVMP 179
T+ P P PP P PP PP P P P+ P +PP
Sbjct: 1582 TTTTPSPPTITTTTPPPTTTPS-PPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTT 1640
Query: 180 GMPPGMMPMGGMMPPG---PGIPPLMPGMPP----GMPPPVPRPGIPPMTQAQAVSAPGI 232
PP P PP P P PP PPP P P T S P
Sbjct: 1641 PSPP---PTTTTTPPPTTTPSPPTTTTPSPPITTTTTPPPTTTPSSPITTTP---SPPTT 1694
Query: 233 LNRPPAPTATVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKAL--FPSTA 290
P+PT T P P+T PS+ +P ++ T S + + S + + P T
Sbjct: 1695 TMTTPSPTTT---PSSPITTTTTPSSTTTPSPPPTTMTTPSPTTTPSPPTTTMTTLPPTT 1751
Query: 291 QAQAAVQGPVGTDFKPLNSTPATTTEPPKPTFP 323
+ P+ P +P +TT P P P
Sbjct: 1752 TSSPLTTTPLPPSITPPTFSPFSTTTPTTPCVP 1784
Score = 52.8 bits (125), Expect = 7e-07
Identities = 53/219 (24%), Positives = 75/219 (34%), Gaps = 34/219 (15%)
Query: 220 PMTQAQAVSAPGILNRPPAPTATVPAPQPPVTKPLFPSAGQMGTPVTSSS----TASSNS 275
PM + +P P PT+T P P T P P+ P T++ T ++
Sbjct: 1391 PMDKCITTPSPPTTTPSPPPTSTTTLP--PTTTPSPPTTTTTTPPPTTTPSPPITTTTTP 1448
Query: 276 ESLSASSKALFPSTAQAQAAVQGPVGTDFKPLNSTPA----TTTEPPKPTFPA------Y 325
+ S + +T P T P +TP+ TTT PP T P+
Sbjct: 1449 PPTTTPSPPISTTTTPPPTTTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPTTTPI 1508
Query: 326 TQSTASTTSTTNSTAAKPAASITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRN 385
T ++TT +T + P + T+ P T T + T+ I P P
Sbjct: 1509 TPPASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITP-------------PTSTTT 1555
Query: 386 LPRPGQAPIGNPPVGPIGGMMPPQPGIPQQQGMRPPMPP 424
LP P P P PP P P PP
Sbjct: 1556 LP-----PTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPP 1589
Score = 52.8 bits (125), Expect = 7e-07
Identities = 55/188 (29%), Positives = 72/188 (38%), Gaps = 17/188 (9%)
Query: 183 PGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAP----GILNRPPA 238
P P G P I P P P P+T V+ G PP
Sbjct: 4140 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTGPPT 4199
Query: 239 PTATVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSES---LSASSKAL-FPSTAQAQA 294
T+T P + + P + TP TS ST+S +ES LS A+ STA
Sbjct: 4200 HTSTAPIAELTTSNP----PPESSTPQTSRSTSSPLTESTTLLSTLPPAIEMTSTAPPST 4255
Query: 295 AVQGPVGTDFKPLNSTPATTTEPP-KPTFPAYTQS----TASTTSTTNSTAAKPAASITS 349
+ L+ P+TTT PP PT T S T ST TT ++A P + S
Sbjct: 4256 PTAPTTTSGGHTLSPPPSTTTSPPGTPTRGTTTGSSSAPTPSTVQTTTTSAWTPTPTPLS 4315
Query: 350 KPATLTTT 357
P+ + TT
Sbjct: 4316 TPSIIRTT 4323
Score = 49.7 bits (117), Expect = 6e-06
Identities = 54/225 (24%), Positives = 71/225 (31%), Gaps = 7/225 (3%)
Query: 183 PGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTAT 242
P P G P I P P P P+T V+ PT T
Sbjct: 1909 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTT 1968
Query: 243 VPAPQPPVTKPLFPSAGQ--MGTPVTSSSTASSNSESLSASSKALFP-STAQAQAAVQGP 299
VT P+ Q TP+T+++T + + P +T P
Sbjct: 1969 PITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTP 2028
Query: 300 VGTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSA 359
GT TTT P PT P TQ T +TT T +T P + T TT
Sbjct: 2029 TGTQTPTTTPITTTTTVTPTPT-PTGTQ-TPTTTPITTTTTVTPTPTPTGTQTPTTTPIT 2086
Query: 360 TSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIG--NPPVGPI 402
T+ + P + + P P P G P PI
Sbjct: 2087 TTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPI 2131
Score = 48.5 bits (114), Expect = 1e-05
Identities = 51/224 (22%), Positives = 69/224 (30%), Gaps = 5/224 (2%)
Query: 183 PGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTAT 242
P P G P I P P P P+T V+ PT T
Sbjct: 1932 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTT 1991
Query: 243 VPAPQPPVTKPLFPSAGQMGT--PVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPV 300
VT P+ Q T P+T+++T + + P T P
Sbjct: 1992 PITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT-TVTPTPT 2050
Query: 301 GTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSAT 360
T + +TP TTT PT T +TT T +T P + T TT T
Sbjct: 2051 PTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 2110
Query: 361 SKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIG--NPPVGPI 402
+ + P + + P P P G P PI
Sbjct: 2111 TTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPI 2154
Score = 48.5 bits (114), Expect = 1e-05
Identities = 51/224 (22%), Positives = 69/224 (30%), Gaps = 5/224 (2%)
Query: 183 PGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTAT 242
P P G P I P P P P+T V+ PT T
Sbjct: 1978 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTT 2037
Query: 243 VPAPQPPVTKPLFPSAGQMGT--PVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPV 300
VT P+ Q T P+T+++T + + P T P
Sbjct: 2038 PITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT-TVTPTPT 2096
Query: 301 GTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSAT 360
T + +TP TTT PT T +TT T +T P + T TT T
Sbjct: 2097 PTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 2156
Query: 361 SKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIG--NPPVGPI 402
+ + P + + P P P G P PI
Sbjct: 2157 TTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPI 2200
Score = 48.5 bits (114), Expect = 1e-05
Identities = 51/224 (22%), Positives = 69/224 (30%), Gaps = 5/224 (2%)
Query: 183 PGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTAT 242
P P G P I P P P P+T V+ PT T
Sbjct: 2024 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTT 2083
Query: 243 VPAPQPPVTKPLFPSAGQMGT--PVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPV 300
VT P+ Q T P+T+++T + + P T P
Sbjct: 2084 PITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT-TVTPTPT 2142
Query: 301 GTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSAT 360
T + +TP TTT PT T +TT T +T P + T TT T
Sbjct: 2143 PTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 2202
Query: 361 SKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIG--NPPVGPI 402
+ + P + + P P P G P PI
Sbjct: 2203 TTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPI 2246
Score = 48.5 bits (114), Expect = 1e-05
Identities = 51/224 (22%), Positives = 69/224 (30%), Gaps = 5/224 (2%)
Query: 183 PGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTAT 242
P P G P I P P P P+T V+ PT T
Sbjct: 2070 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTT 2129
Query: 243 VPAPQPPVTKPLFPSAGQMGT--PVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPV 300
VT P+ Q T P+T+++T + + P T P
Sbjct: 2130 PITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT-TVTPTPT 2188
Query: 301 GTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSAT 360
T + +TP TTT PT T +TT T +T P + T TT T
Sbjct: 2189 PTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 2248
Query: 361 SKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIG--NPPVGPI 402
+ + P + + P P P G P PI
Sbjct: 2249 TTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPI 2292
Score = 48.5 bits (114), Expect = 1e-05
Identities = 51/224 (22%), Positives = 69/224 (30%), Gaps = 5/224 (2%)
Query: 183 PGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTAT 242
P P G P I P P P P+T V+ PT T
Sbjct: 2116 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTT 2175
Query: 243 VPAPQPPVTKPLFPSAGQMGT--PVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPV 300
VT P+ Q T P+T+++T + + P T P
Sbjct: 2176 PITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT-TVTPTPT 2234
Query: 301 GTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSAT 360
T + +TP TTT PT T +TT T +T P + T TT T
Sbjct: 2235 PTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 2294
Query: 361 SKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIG--NPPVGPI 402
+ + P + + P P P G P PI
Sbjct: 2295 TTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPI 2338
Score = 48.5 bits (114), Expect = 1e-05
Identities = 51/224 (22%), Positives = 69/224 (30%), Gaps = 5/224 (2%)
Query: 183 PGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTAT 242
P P G P I P P P P+T V+ PT T
Sbjct: 2162 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTT 2221
Query: 243 VPAPQPPVTKPLFPSAGQMGT--PVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPV 300
VT P+ Q T P+T+++T + + P T P
Sbjct: 2222 PITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT-TVTPTPT 2280
Query: 301 GTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSAT 360
T + +TP TTT PT T +TT T +T P + T TT T
Sbjct: 2281 PTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 2340
Query: 361 SKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIG--NPPVGPI 402
+ + P + + P P P G P PI
Sbjct: 2341 TTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPI 2384
Score = 48.5 bits (114), Expect = 1e-05
Identities = 51/224 (22%), Positives = 69/224 (30%), Gaps = 5/224 (2%)
Query: 183 PGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTAT 242
P P G P I P P P P+T V+ PT T
Sbjct: 2208 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTT 2267
Query: 243 VPAPQPPVTKPLFPSAGQMGT--PVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPV 300
VT P+ Q T P+T+++T + + P T P
Sbjct: 2268 PITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT-TVTPTPT 2326
Query: 301 GTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSAT 360
T + +TP TTT PT T +TT T +T P + T TT T
Sbjct: 2327 PTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 2386
Query: 361 SKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIG--NPPVGPI 402
+ + P + + P P P G P PI
Sbjct: 2387 TTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPI 2430
Score = 48.5 bits (114), Expect = 1e-05
Identities = 51/224 (22%), Positives = 69/224 (30%), Gaps = 5/224 (2%)
Query: 183 PGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTAT 242
P P G P I P P P P+T V+ PT T
Sbjct: 2254 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTT 2313
Query: 243 VPAPQPPVTKPLFPSAGQMGT--PVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPV 300
VT P+ Q T P+T+++T + + P T P
Sbjct: 2314 PITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT-TVTPTPT 2372
Query: 301 GTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSAT 360
T + +TP TTT PT T +TT T +T P + T TT T
Sbjct: 2373 PTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 2432
Query: 361 SKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIG--NPPVGPI 402
+ + P + + P P P G P PI
Sbjct: 2433 TTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPI 2476
Score = 48.5 bits (114), Expect = 1e-05
Identities = 51/224 (22%), Positives = 69/224 (30%), Gaps = 5/224 (2%)
Query: 183 PGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTAT 242
P P G P I P P P P+T V+ PT T
Sbjct: 2300 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTT 2359
Query: 243 VPAPQPPVTKPLFPSAGQMGT--PVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPV 300
VT P+ Q T P+T+++T + + P T P
Sbjct: 2360 PITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT-TVTPTPT 2418
Query: 301 GTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSAT 360
T + +TP TTT PT T +TT T +T P + T TT T
Sbjct: 2419 PTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 2478
Query: 361 SKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIG--NPPVGPI 402
+ + P + + P P P G P PI
Sbjct: 2479 TTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPI 2522
Score = 48.5 bits (114), Expect = 1e-05
Identities = 51/224 (22%), Positives = 69/224 (30%), Gaps = 5/224 (2%)
Query: 183 PGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTAT 242
P P G P I P P P P+T V+ PT T
Sbjct: 2346 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTT 2405
Query: 243 VPAPQPPVTKPLFPSAGQMGT--PVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPV 300
VT P+ Q T P+T+++T + + P T P
Sbjct: 2406 PITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT-TVTPTPT 2464
Query: 301 GTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSAT 360
T + +TP TTT PT T +TT T +T P + T TT T
Sbjct: 2465 PTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 2524
Query: 361 SKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIG--NPPVGPI 402
+ + P + + P P P G P PI
Sbjct: 2525 TTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPI 2568
Score = 48.5 bits (114), Expect = 1e-05
Identities = 51/224 (22%), Positives = 69/224 (30%), Gaps = 5/224 (2%)
Query: 183 PGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTAT 242
P P G P I P P P P+T V+ PT T
Sbjct: 2392 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTT 2451
Query: 243 VPAPQPPVTKPLFPSAGQMGT--PVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPV 300
VT P+ Q T P+T+++T + + P T P
Sbjct: 2452 PITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT-TVTPTPT 2510
Query: 301 GTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSAT 360
T + +TP TTT PT T +TT T +T P + T TT T
Sbjct: 2511 PTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 2570
Query: 361 SKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIG--NPPVGPI 402
+ + P + + P P P G P PI
Sbjct: 2571 TTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPI 2614
Score = 48.5 bits (114), Expect = 1e-05
Identities = 51/224 (22%), Positives = 69/224 (30%), Gaps = 5/224 (2%)
Query: 183 PGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTAT 242
P P G P I P P P P+T V+ PT T
Sbjct: 2438 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTT 2497
Query: 243 VPAPQPPVTKPLFPSAGQMGT--PVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPV 300
VT P+ Q T P+T+++T + + P T P
Sbjct: 2498 PITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT-TVTPTPT 2556
Query: 301 GTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSAT 360
T + +TP TTT PT T +TT T +T P + T TT T
Sbjct: 2557 PTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 2616
Query: 361 SKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIG--NPPVGPI 402
+ + P + + P P P G P PI
Sbjct: 2617 TTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPI 2660
Score = 48.5 bits (114), Expect = 1e-05
Identities = 51/224 (22%), Positives = 69/224 (30%), Gaps = 5/224 (2%)
Query: 183 PGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTAT 242
P P G P I P P P P+T V+ PT T
Sbjct: 2484 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTT 2543
Query: 243 VPAPQPPVTKPLFPSAGQMGT--PVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPV 300
VT P+ Q T P+T+++T + + P T P
Sbjct: 2544 PITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT-TVTPTPT 2602
Query: 301 GTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSAT 360
T + +TP TTT PT T +TT T +T P + T TT T
Sbjct: 2603 PTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 2662
Query: 361 SKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIG--NPPVGPI 402
+ + P + + P P P G P PI
Sbjct: 2663 TTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPI 2706
Score = 48.5 bits (114), Expect = 1e-05
Identities = 51/224 (22%), Positives = 69/224 (30%), Gaps = 5/224 (2%)
Query: 183 PGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTAT 242
P P G P I P P P P+T V+ PT T
Sbjct: 2530 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTT 2589
Query: 243 VPAPQPPVTKPLFPSAGQMGT--PVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPV 300
VT P+ Q T P+T+++T + + P T P
Sbjct: 2590 PITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT-TVTPTPT 2648
Query: 301 GTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSAT 360
T + +TP TTT PT T +TT T +T P + T TT T
Sbjct: 2649 PTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 2708
Query: 361 SKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIG--NPPVGPI 402
+ + P + + P P P G P PI
Sbjct: 2709 TTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPI 2752
Score = 48.5 bits (114), Expect = 1e-05
Identities = 51/224 (22%), Positives = 69/224 (30%), Gaps = 5/224 (2%)
Query: 183 PGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTAT 242
P P G P I P P P P+T V+ PT T
Sbjct: 2576 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTT 2635
Query: 243 VPAPQPPVTKPLFPSAGQMGT--PVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPV 300
VT P+ Q T P+T+++T + + P T P
Sbjct: 2636 PITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT-TVTPTPT 2694
Query: 301 GTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSAT 360
T + +TP TTT PT T +TT T +T P + T TT T
Sbjct: 2695 PTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 2754
Query: 361 SKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIG--NPPVGPI 402
+ + P + + P P P G P PI
Sbjct: 2755 TTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPI 2798
Score = 48.5 bits (114), Expect = 1e-05
Identities = 51/224 (22%), Positives = 69/224 (30%), Gaps = 5/224 (2%)
Query: 183 PGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTAT 242
P P G P I P P P P+T V+ PT T
Sbjct: 2622 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTT 2681
Query: 243 VPAPQPPVTKPLFPSAGQMGT--PVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPV 300
VT P+ Q T P+T+++T + + P T P
Sbjct: 2682 PITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT-TVTPTPT 2740
Query: 301 GTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSAT 360
T + +TP TTT PT T +TT T +T P + T TT T
Sbjct: 2741 PTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 2800
Query: 361 SKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIG--NPPVGPI 402
+ + P + + P P P G P PI
Sbjct: 2801 TTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPI 2844
Score = 48.5 bits (114), Expect = 1e-05
Identities = 51/224 (22%), Positives = 69/224 (30%), Gaps = 5/224 (2%)
Query: 183 PGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTAT 242
P P G P I P P P P+T V+ PT T
Sbjct: 2668 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTT 2727
Query: 243 VPAPQPPVTKPLFPSAGQMGT--PVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPV 300
VT P+ Q T P+T+++T + + P T P
Sbjct: 2728 PITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT-TVTPTPT 2786
Query: 301 GTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSAT 360
T + +TP TTT PT T +TT T +T P + T TT T
Sbjct: 2787 PTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 2846
Query: 361 SKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIG--NPPVGPI 402
+ + P + + P P P G P PI
Sbjct: 2847 TTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPI 2890
Score = 48.5 bits (114), Expect = 1e-05
Identities = 51/224 (22%), Positives = 69/224 (30%), Gaps = 5/224 (2%)
Query: 183 PGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTAT 242
P P G P I P P P P+T V+ PT T
Sbjct: 2714 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTT 2773
Query: 243 VPAPQPPVTKPLFPSAGQMGT--PVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPV 300
VT P+ Q T P+T+++T + + P T P
Sbjct: 2774 PITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT-TVTPTPT 2832
Query: 301 GTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSAT 360
T + +TP TTT PT T +TT T +T P + T TT T
Sbjct: 2833 PTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 2892
Query: 361 SKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIG--NPPVGPI 402
+ + P + + P P P G P PI
Sbjct: 2893 TTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPI 2936
Score = 48.5 bits (114), Expect = 1e-05
Identities = 51/224 (22%), Positives = 69/224 (30%), Gaps = 5/224 (2%)
Query: 183 PGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTAT 242
P P G P I P P P P+T V+ PT T
Sbjct: 2760 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTT 2819
Query: 243 VPAPQPPVTKPLFPSAGQMGT--PVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPV 300
VT P+ Q T P+T+++T + + P T P
Sbjct: 2820 PITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT-TVTPTPT 2878
Query: 301 GTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSAT 360
T + +TP TTT PT T +TT T +T P + T TT T
Sbjct: 2879 PTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 2938
Query: 361 SKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIG--NPPVGPI 402
+ + P + + P P P G P PI
Sbjct: 2939 TTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPI 2982
Score = 48.5 bits (114), Expect = 1e-05
Identities = 51/224 (22%), Positives = 69/224 (30%), Gaps = 5/224 (2%)
Query: 183 PGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTAT 242
P P G P I P P P P+T V+ PT T
Sbjct: 2806 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTT 2865
Query: 243 VPAPQPPVTKPLFPSAGQMGT--PVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPV 300
VT P+ Q T P+T+++T + + P T P
Sbjct: 2866 PITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT-TVTPTPT 2924
Query: 301 GTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSAT 360
T + +TP TTT PT T +TT T +T P + T TT T
Sbjct: 2925 PTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 2984
Query: 361 SKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIG--NPPVGPI 402
+ + P + + P P P G P PI
Sbjct: 2985 TTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPI 3028
Score = 48.5 bits (114), Expect = 1e-05
Identities = 51/224 (22%), Positives = 69/224 (30%), Gaps = 5/224 (2%)
Query: 183 PGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTAT 242
P P G P I P P P P+T V+ PT T
Sbjct: 2852 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTT 2911
Query: 243 VPAPQPPVTKPLFPSAGQMGT--PVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPV 300
VT P+ Q T P+T+++T + + P T P
Sbjct: 2912 PITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT-TVTPTPT 2970
Query: 301 GTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSAT 360
T + +TP TTT PT T +TT T +T P + T TT T
Sbjct: 2971 PTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 3030
Query: 361 SKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIG--NPPVGPI 402
+ + P + + P P P G P PI
Sbjct: 3031 TTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPI 3074
Score = 48.5 bits (114), Expect = 1e-05
Identities = 51/224 (22%), Positives = 69/224 (30%), Gaps = 5/224 (2%)
Query: 183 PGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTAT 242
P P G P I P P P P+T V+ PT T
Sbjct: 2898 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTT 2957
Query: 243 VPAPQPPVTKPLFPSAGQMGT--PVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPV 300
VT P+ Q T P+T+++T + + P T P
Sbjct: 2958 PITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT-TVTPTPT 3016
Query: 301 GTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSAT 360
T + +TP TTT PT T +TT T +T P + T TT T
Sbjct: 3017 PTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 3076
Query: 361 SKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIG--NPPVGPI 402
+ + P + + P P P G P PI
Sbjct: 3077 TTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPI 3120
Score = 48.5 bits (114), Expect = 1e-05
Identities = 51/224 (22%), Positives = 69/224 (30%), Gaps = 5/224 (2%)
Query: 183 PGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTAT 242
P P G P I P P P P+T V+ PT T
Sbjct: 2944 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTT 3003
Query: 243 VPAPQPPVTKPLFPSAGQMGT--PVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPV 300
VT P+ Q T P+T+++T + + P T P
Sbjct: 3004 PITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT-TVTPTPT 3062
Query: 301 GTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSAT 360
T + +TP TTT PT T +TT T +T P + T TT T
Sbjct: 3063 PTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 3122
Query: 361 SKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIG--NPPVGPI 402
+ + P + + P P P G P PI
Sbjct: 3123 TTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPI 3166
Score = 48.5 bits (114), Expect = 1e-05
Identities = 51/224 (22%), Positives = 69/224 (30%), Gaps = 5/224 (2%)
Query: 183 PGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTAT 242
P P G P I P P P P+T V+ PT T
Sbjct: 2990 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTT 3049
Query: 243 VPAPQPPVTKPLFPSAGQMGT--PVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPV 300
VT P+ Q T P+T+++T + + P T P
Sbjct: 3050 PITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT-TVTPTPT 3108
Query: 301 GTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSAT 360
T + +TP TTT PT T +TT T +T P + T TT T
Sbjct: 3109 PTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 3168
Query: 361 SKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIG--NPPVGPI 402
+ + P + + P P P G P PI
Sbjct: 3169 TTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPI 3212
Score = 48.5 bits (114), Expect = 1e-05
Identities = 51/224 (22%), Positives = 69/224 (30%), Gaps = 5/224 (2%)
Query: 183 PGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTAT 242
P P G P I P P P P+T V+ PT T
Sbjct: 3036 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTT 3095
Query: 243 VPAPQPPVTKPLFPSAGQMGT--PVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPV 300
VT P+ Q T P+T+++T + + P T P
Sbjct: 3096 PITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT-TVTPTPT 3154
Query: 301 GTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSAT 360
T + +TP TTT PT T +TT T +T P + T TT T
Sbjct: 3155 PTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 3214
Query: 361 SKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIG--NPPVGPI 402
+ + P + + P P P G P PI
Sbjct: 3215 TTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPI 3258
Score = 48.5 bits (114), Expect = 1e-05
Identities = 51/224 (22%), Positives = 69/224 (30%), Gaps = 5/224 (2%)
Query: 183 PGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTAT 242
P P G P I P P P P+T V+ PT T
Sbjct: 3082 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTT 3141
Query: 243 VPAPQPPVTKPLFPSAGQMGT--PVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPV 300
VT P+ Q T P+T+++T + + P T P
Sbjct: 3142 PITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT-TVTPTPT 3200
Query: 301 GTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSAT 360
T + +TP TTT PT T +TT T +T P + T TT T
Sbjct: 3201 PTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 3260
Query: 361 SKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIG--NPPVGPI 402
+ + P + + P P P G P PI
Sbjct: 3261 TTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPI 3304
Score = 48.5 bits (114), Expect = 1e-05
Identities = 51/224 (22%), Positives = 69/224 (30%), Gaps = 5/224 (2%)
Query: 183 PGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTAT 242
P P G P I P P P P+T V+ PT T
Sbjct: 3128 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTT 3187
Query: 243 VPAPQPPVTKPLFPSAGQMGT--PVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPV 300
VT P+ Q T P+T+++T + + P T P
Sbjct: 3188 PITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT-TVTPTPT 3246
Query: 301 GTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSAT 360
T + +TP TTT PT T +TT T +T P + T TT T
Sbjct: 3247 PTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 3306
Query: 361 SKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIG--NPPVGPI 402
+ + P + + P P P G P PI
Sbjct: 3307 TTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPI 3350
Score = 48.5 bits (114), Expect = 1e-05
Identities = 51/224 (22%), Positives = 69/224 (30%), Gaps = 5/224 (2%)
Query: 183 PGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTAT 242
P P G P I P P P P+T V+ PT T
Sbjct: 3174 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTT 3233
Query: 243 VPAPQPPVTKPLFPSAGQMGT--PVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPV 300
VT P+ Q T P+T+++T + + P T P
Sbjct: 3234 PITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT-TVTPTPT 3292
Query: 301 GTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSAT 360
T + +TP TTT PT T +TT T +T P + T TT T
Sbjct: 3293 PTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 3352
Query: 361 SKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIG--NPPVGPI 402
+ + P + + P P P G P PI
Sbjct: 3353 TTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPI 3396
Score = 48.5 bits (114), Expect = 1e-05
Identities = 51/224 (22%), Positives = 69/224 (30%), Gaps = 5/224 (2%)
Query: 183 PGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTAT 242
P P G P I P P P P+T V+ PT T
Sbjct: 3220 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTT 3279
Query: 243 VPAPQPPVTKPLFPSAGQMGT--PVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPV 300
VT P+ Q T P+T+++T + + P T P
Sbjct: 3280 PITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT-TVTPTPT 3338
Query: 301 GTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSAT 360
T + +TP TTT PT T +TT T +T P + T TT T
Sbjct: 3339 PTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 3398
Query: 361 SKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIG--NPPVGPI 402
+ + P + + P P P G P PI
Sbjct: 3399 TTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPI 3442
Score = 48.5 bits (114), Expect = 1e-05
Identities = 51/224 (22%), Positives = 69/224 (30%), Gaps = 5/224 (2%)
Query: 183 PGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTAT 242
P P G P I P P P P+T V+ PT T
Sbjct: 3266 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTT 3325
Query: 243 VPAPQPPVTKPLFPSAGQMGT--PVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPV 300
VT P+ Q T P+T+++T + + P T P
Sbjct: 3326 PITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT-TVTPTPT 3384
Query: 301 GTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSAT 360
T + +TP TTT PT T +TT T +T P + T TT T
Sbjct: 3385 PTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 3444
Query: 361 SKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIG--NPPVGPI 402
+ + P + + P P P G P PI
Sbjct: 3445 TTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPI 3488
Score = 48.5 bits (114), Expect = 1e-05
Identities = 51/224 (22%), Positives = 69/224 (30%), Gaps = 5/224 (2%)
Query: 183 PGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTAT 242
P P G P I P P P P+T V+ PT T
Sbjct: 3312 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTT 3371
Query: 243 VPAPQPPVTKPLFPSAGQMGT--PVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPV 300
VT P+ Q T P+T+++T + + P T P
Sbjct: 3372 PITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT-TVTPTPT 3430
Query: 301 GTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSAT 360
T + +TP TTT PT T +TT T +T P + T TT T
Sbjct: 3431 PTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 3490
Query: 361 SKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIG--NPPVGPI 402
+ + P + + P P P G P PI
Sbjct: 3491 TTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPI 3534
Score = 48.5 bits (114), Expect = 1e-05
Identities = 51/224 (22%), Positives = 69/224 (30%), Gaps = 5/224 (2%)
Query: 183 PGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTAT 242
P P G P I P P P P+T V+ PT T
Sbjct: 3358 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTT 3417
Query: 243 VPAPQPPVTKPLFPSAGQMGT--PVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPV 300
VT P+ Q T P+T+++T + + P T P
Sbjct: 3418 PITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT-TVTPTPT 3476
Query: 301 GTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSAT 360
T + +TP TTT PT T +TT T +T P + T TT T
Sbjct: 3477 PTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 3536
Query: 361 SKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIG--NPPVGPI 402
+ + P + + P P P G P PI
Sbjct: 3537 TTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPI 3580
Score = 48.5 bits (114), Expect = 1e-05
Identities = 51/224 (22%), Positives = 69/224 (30%), Gaps = 5/224 (2%)
Query: 183 PGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTAT 242
P P G P I P P P P+T V+ PT T
Sbjct: 3404 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTT 3463
Query: 243 VPAPQPPVTKPLFPSAGQMGT--PVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPV 300
VT P+ Q T P+T+++T + + P T P
Sbjct: 3464 PITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT-TVTPTPT 3522
Query: 301 GTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSAT 360
T + +TP TTT PT T +TT T +T P + T TT T
Sbjct: 3523 PTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 3582
Query: 361 SKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIG--NPPVGPI 402
+ + P + + P P P G P PI
Sbjct: 3583 TTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPI 3626
Score = 48.5 bits (114), Expect = 1e-05
Identities = 51/224 (22%), Positives = 69/224 (30%), Gaps = 5/224 (2%)
Query: 183 PGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTAT 242
P P G P I P P P P+T V+ PT T
Sbjct: 3450 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTT 3509
Query: 243 VPAPQPPVTKPLFPSAGQMGT--PVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPV 300
VT P+ Q T P+T+++T + + P T P
Sbjct: 3510 PITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT-TVTPTPT 3568
Query: 301 GTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSAT 360
T + +TP TTT PT T +TT T +T P + T TT T
Sbjct: 3569 PTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 3628
Query: 361 SKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIG--NPPVGPI 402
+ + P + + P P P G P PI
Sbjct: 3629 TTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPI 3672
Score = 48.5 bits (114), Expect = 1e-05
Identities = 51/224 (22%), Positives = 69/224 (30%), Gaps = 5/224 (2%)
Query: 183 PGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTAT 242
P P G P I P P P P+T V+ PT T
Sbjct: 3496 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTT 3555
Query: 243 VPAPQPPVTKPLFPSAGQMGT--PVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPV 300
VT P+ Q T P+T+++T + + P T P
Sbjct: 3556 PITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT-TVTPTPT 3614
Query: 301 GTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSAT 360
T + +TP TTT PT T +TT T +T P + T TT T
Sbjct: 3615 PTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 3674
Query: 361 SKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIG--NPPVGPI 402
+ + P + + P P P G P PI
Sbjct: 3675 TTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPI 3718
Score = 48.5 bits (114), Expect = 1e-05
Identities = 51/224 (22%), Positives = 69/224 (30%), Gaps = 5/224 (2%)
Query: 183 PGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTAT 242
P P G P I P P P P+T V+ PT T
Sbjct: 3542 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTT 3601
Query: 243 VPAPQPPVTKPLFPSAGQMGT--PVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPV 300
VT P+ Q T P+T+++T + + P T P
Sbjct: 3602 PITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT-TVTPTPT 3660
Query: 301 GTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSAT 360
T + +TP TTT PT T +TT T +T P + T TT T
Sbjct: 3661 PTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 3720
Query: 361 SKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIG--NPPVGPI 402
+ + P + + P P P G P PI
Sbjct: 3721 TTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPI 3764
Score = 48.5 bits (114), Expect = 1e-05
Identities = 51/224 (22%), Positives = 69/224 (30%), Gaps = 5/224 (2%)
Query: 183 PGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTAT 242
P P G P I P P P P+T V+ PT T
Sbjct: 3588 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTT 3647
Query: 243 VPAPQPPVTKPLFPSAGQMGT--PVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPV 300
VT P+ Q T P+T+++T + + P T P
Sbjct: 3648 PITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT-TVTPTPT 3706
Query: 301 GTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSAT 360
T + +TP TTT PT T +TT T +T P + T TT T
Sbjct: 3707 PTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 3766
Query: 361 SKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIG--NPPVGPI 402
+ + P + + P P P G P PI
Sbjct: 3767 TTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPI 3810
Score = 48.5 bits (114), Expect = 1e-05
Identities = 51/224 (22%), Positives = 69/224 (30%), Gaps = 5/224 (2%)
Query: 183 PGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTAT 242
P P G P I P P P P+T V+ PT T
Sbjct: 3634 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTT 3693
Query: 243 VPAPQPPVTKPLFPSAGQMGT--PVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPV 300
VT P+ Q T P+T+++T + + P T P
Sbjct: 3694 PITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT-TVTPTPT 3752
Query: 301 GTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSAT 360
T + +TP TTT PT T +TT T +T P + T TT T
Sbjct: 3753 PTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 3812
Query: 361 SKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIG--NPPVGPI 402
+ + P + + P P P G P PI
Sbjct: 3813 TTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPI 3856
Score = 48.5 bits (114), Expect = 1e-05
Identities = 51/224 (22%), Positives = 69/224 (30%), Gaps = 5/224 (2%)
Query: 183 PGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTAT 242
P P G P I P P P P+T V+ PT T
Sbjct: 3680 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTT 3739
Query: 243 VPAPQPPVTKPLFPSAGQMGT--PVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPV 300
VT P+ Q T P+T+++T + + P T P
Sbjct: 3740 PITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT-TVTPTPT 3798
Query: 301 GTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSAT 360
T + +TP TTT PT T +TT T +T P + T TT T
Sbjct: 3799 PTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 3858
Query: 361 SKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIG--NPPVGPI 402
+ + P + + P P P G P PI
Sbjct: 3859 TTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPI 3902
Score = 48.5 bits (114), Expect = 1e-05
Identities = 51/224 (22%), Positives = 69/224 (30%), Gaps = 5/224 (2%)
Query: 183 PGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTAT 242
P P G P I P P P P+T V+ PT T
Sbjct: 3726 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTT 3785
Query: 243 VPAPQPPVTKPLFPSAGQMGT--PVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPV 300
VT P+ Q T P+T+++T + + P T P
Sbjct: 3786 PITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT-TVTPTPT 3844
Query: 301 GTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSAT 360
T + +TP TTT PT T +TT T +T P + T TT T
Sbjct: 3845 PTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 3904
Query: 361 SKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIG--NPPVGPI 402
+ + P + + P P P G P PI
Sbjct: 3905 TTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPI 3948
Score = 48.5 bits (114), Expect = 1e-05
Identities = 51/224 (22%), Positives = 69/224 (30%), Gaps = 5/224 (2%)
Query: 183 PGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTAT 242
P P G P I P P P P+T V+ PT T
Sbjct: 3772 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTT 3831
Query: 243 VPAPQPPVTKPLFPSAGQMGT--PVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPV 300
VT P+ Q T P+T+++T + + P T P
Sbjct: 3832 PITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT-TVTPTPT 3890
Query: 301 GTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSAT 360
T + +TP TTT PT T +TT T +T P + T TT T
Sbjct: 3891 PTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 3950
Query: 361 SKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIG--NPPVGPI 402
+ + P + + P P P G P PI
Sbjct: 3951 TTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPI 3994
Score = 48.5 bits (114), Expect = 1e-05
Identities = 51/224 (22%), Positives = 69/224 (30%), Gaps = 5/224 (2%)
Query: 183 PGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTAT 242
P P G P I P P P P+T V+ PT T
Sbjct: 3818 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTT 3877
Query: 243 VPAPQPPVTKPLFPSAGQMGT--PVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPV 300
VT P+ Q T P+T+++T + + P T P
Sbjct: 3878 PITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT-TVTPTPT 3936
Query: 301 GTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSAT 360
T + +TP TTT PT T +TT T +T P + T TT T
Sbjct: 3937 PTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 3996
Query: 361 SKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIG--NPPVGPI 402
+ + P + + P P P G P PI
Sbjct: 3997 TTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPI 4040
Score = 48.5 bits (114), Expect = 1e-05
Identities = 51/224 (22%), Positives = 69/224 (30%), Gaps = 5/224 (2%)
Query: 183 PGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTAT 242
P P G P I P P P P+T V+ PT T
Sbjct: 3864 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTT 3923
Query: 243 VPAPQPPVTKPLFPSAGQMGT--PVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPV 300
VT P+ Q T P+T+++T + + P T P
Sbjct: 3924 PITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT-TVTPTPT 3982
Query: 301 GTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSAT 360
T + +TP TTT PT T +TT T +T P + T TT T
Sbjct: 3983 PTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 4042
Query: 361 SKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIG--NPPVGPI 402
+ + P + + P P P G P PI
Sbjct: 4043 TTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPI 4086
Score = 48.5 bits (114), Expect = 1e-05
Identities = 51/224 (22%), Positives = 69/224 (30%), Gaps = 5/224 (2%)
Query: 183 PGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTAT 242
P P G P I P P P P+T V+ PT T
Sbjct: 3910 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTT 3969
Query: 243 VPAPQPPVTKPLFPSAGQMGT--PVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPV 300
VT P+ Q T P+T+++T + + P T P
Sbjct: 3970 PITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT-TVTPTPT 4028
Query: 301 GTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSAT 360
T + +TP TTT PT T +TT T +T P + T TT T
Sbjct: 4029 PTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 4088
Query: 361 SKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIG--NPPVGPI 402
+ + P + + P P P G P PI
Sbjct: 4089 TTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPI 4132
Score = 46.2 bits (108), Expect = 7e-05
Identities = 46/188 (24%), Positives = 67/188 (35%), Gaps = 14/188 (7%)
Query: 183 PGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTAT 242
P P G P I P P P P+T V+ PT T
Sbjct: 4117 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTT 4176
Query: 243 VPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPVGT 302
VT P+ Q G P + T+++ L+ S+ ST Q + P+
Sbjct: 4177 PITTTTTVTPTPTPTGTQTGPP---THTSTAPIAELTTSNPPPESSTPQTSRSTSSPLTE 4233
Query: 303 DFKPLNSTPA----TTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTS 358
L++ P T+T PP + TA TT++ T + P ++ TS P T T +
Sbjct: 4234 STTLLSTLPPAIEMTSTAPP-------STPTAPTTTSGGHTLSPPPSTTTSPPGTPTRGT 4286
Query: 359 ATSKLIHP 366
T P
Sbjct: 4287 TTGSSSAP 4294
Score = 45.4 bits (106), Expect = 1e-04
Identities = 45/178 (25%), Positives = 61/178 (34%), Gaps = 17/178 (9%)
Query: 240 TATVPAPQPPVTKPL------FPSAGQMG------TPVTSSSTASSNSESLSASSKALFP 287
T T P PP T P+ P+ G TP+T+++T + + P
Sbjct: 1887 TTTTENPTPPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTP 1946
Query: 288 -STAQAQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAAS 346
+T P GT TTT P PT P TQ T +TT T +T P +
Sbjct: 1947 ITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPT-PTGTQ-TPTTTPITTTTTVTPTPT 2004
Query: 347 ITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIG--NPPVGPI 402
T TT T+ + P + + P P P G P PI
Sbjct: 2005 PTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPI 2062
Score = 44.7 bits (104), Expect = 2e-04
Identities = 47/220 (21%), Positives = 70/220 (31%), Gaps = 12/220 (5%)
Query: 183 PGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTAT 242
P P G P I P P P P+T V+ PT T
Sbjct: 4048 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVT----------PTPT 4097
Query: 243 VPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPVGT 302
Q P T P+ + TP + + + + + ++ P+ Q P+ T
Sbjct: 4098 PTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPI-T 4156
Query: 303 DFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKP-ATLTTTSATS 361
+ TP T T P T +T + T T T P ++ P A LTT++
Sbjct: 4157 TTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTGPPTHTSTAPIAELTTSNPPP 4216
Query: 362 KLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNPPVGP 401
+ P S + LP + PP P
Sbjct: 4217 ESSTPQTSRSTSSPLTESTTLLSTLPPAIEMTSTAPPSTP 4256
Score = 43.9 bits (102), Expect = 3e-04
Identities = 57/250 (22%), Positives = 76/250 (30%), Gaps = 12/250 (4%)
Query: 183 PGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTAT 242
P P G P I P P P P+T V+ PT T
Sbjct: 3956 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTT 4015
Query: 243 VPAPQPPVTKPLFPSAGQMGT--PVTSSSTASSNSESLSASSKALFP-STAQAQAAVQGP 299
VT P+ Q T P+T+++T + + P +T P
Sbjct: 4016 PITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTP 4075
Query: 300 VGTDFKPLNSTPATTTEPPKPTFPAYTQSTAS----TTSTTNSTAAKPAASITSKPATLT 355
GT TTT P PT P TQ+ + TT+T T P + T P T
Sbjct: 4076 TGTQTPTTTPITTTTTVTPTPT-PTGTQTPTTTPITTTTTVTPT---PTPTGTQTPTTTP 4131
Query: 356 TTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNPPVGPIGGMMPPQPGIPQQ 415
T+ T+ P + + P P P PI P P
Sbjct: 4132 ITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTP-TPTP 4190
Query: 416 QGMRPPMPPH 425
G + P H
Sbjct: 4191 TGTQTGPPTH 4200
Score = 39.7 bits (91), Expect = 0.006
Identities = 35/127 (27%), Positives = 47/127 (37%), Gaps = 11/127 (8%)
Query: 237 PAPTATVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKALFP-STAQAQAA 295
P T T P P T P+ TP+T+++T + + P +T
Sbjct: 1900 PITTTTTVTPTPTPTGTQTPTT----TPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTP 1955
Query: 296 VQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQSTAS----TTSTTNSTAAKPAASI-TSK 350
P GT TTT P PT P TQ+ + TT+T T T+
Sbjct: 1956 TPTPTGTQTPTTTPITTTTTVTPTPT-PTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTT 2014
Query: 351 PATLTTT 357
P T TTT
Sbjct: 2015 PITTTTT 2021
Score = 30.0 bits (66), Expect = 4.8
Identities = 18/51 (35%), Positives = 21/51 (41%)
Query: 310 TPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSAT 360
T TTT PT P T T +TT T T T+ T TT + T
Sbjct: 1883 TTMTTTTTENPTPPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPT 1933
Score = 29.6 bits (65), Expect = 6.3
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 4/53 (7%)
Query: 305 KPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTT 357
+P T TT P PT T +T T + T + P T+ P T TTT
Sbjct: 1881 QPTTMTTTTTENPTPPTTTPITTTTTVTPTPTPTGTQTP----TTTPITTTTT 1929
>gi|21361376 splicing factor 3a, subunit 2 [Homo sapiens]
Length = 464
Score = 78.6 bits (192), Expect = 1e-14
Identities = 90/310 (29%), Positives = 111/310 (35%), Gaps = 70/310 (22%)
Query: 141 PMAQPGLPPVPGAPGMPPGIPPLMPGVPPLMPGMPPVMPGMPPGMMPMGGMMPPGPGIPP 200
P A P LP P PP PPLM G+PP P +P +P PPG +P+ M P GP P
Sbjct: 217 PPAPPSLPAGPPGVKRPP--PPLMNGLPP-RPPLPESLPPPPPGGLPLPPMPPTGPA--P 271
Query: 201 LMPGMPPGMPPPV-----PRPGIPPMTQAQAVSAPGILNRPPAPTATVPAP-QPPVTKPL 254
P PP +PPP P P + P APG+ PPAP PAP P T +
Sbjct: 272 SGPPGPPQLPPPAPGVHPPAPVVHPPASGVHPPAPGV--HPPAPGVHPPAPGVHPPTSGV 329
Query: 255 FPSAGQMGTPVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPVGTDFKPLNSTPATT 314
P A + P P V P P PA
Sbjct: 330 HPPAPGVHPPA---------------------PGVHPPAPGVHPPA-----PGVHPPAPG 363
Query: 315 TEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSATSKLIHPDEDISLEE 374
PP P+ + Q+ + + A P A PA A +HP
Sbjct: 364 VHPP-PSAGVHPQAPGVHPA---APAVHPQAPGVHPPAPGMHPQAPG--VHP-------- 409
Query: 375 RRAQLPKYQRNLPRPGQAPIGNPPVGPIGGMMPPQPGIPQQQGMRPPMPPHGQYGGHHQG 434
Q P + P P G P P G+ PP P P +RPP+P G
Sbjct: 410 ---QPPGVHPSAPGVHPQPPGVHPSNP--GVHPPTPMPPM---LRPPLPSEG-------- 453
Query: 435 MPGYLPGAMP 444
PG +P P
Sbjct: 454 -PGNIPPPPP 462
Score = 78.2 bits (191), Expect = 2e-14
Identities = 52/141 (36%), Positives = 65/141 (46%), Gaps = 18/141 (12%)
Query: 129 PQPVQPQQGYIPPMAQPGLP--------PVPGAPGMPPGIPPLMPGVPPLMPGMPPVMPG 180
P+P P+ +PP GLP P P P PP +PP PGV P P + P G
Sbjct: 243 PRPPLPES--LPPPPPGGLPLPPMPPTGPAPSGPPGPPQLPPPAPGVHPPAPVVHPPASG 300
Query: 181 MPPGMMPMGGMMPPGPGIPPLMPGM-PPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAP 239
+ P P G+ PP PG+ P PG+ PP P PG+ P APG+ PPAP
Sbjct: 301 VHP---PAPGVHPPAPGVHPPAPGVHPPTSGVHPPAPGVHPPAPGVHPPAPGV--HPPAP 355
Query: 240 TATVPAP--QPPVTKPLFPSA 258
PAP PP + + P A
Sbjct: 356 GVHPPAPGVHPPPSAGVHPQA 376
Score = 76.6 bits (187), Expect = 4e-14
Identities = 55/179 (30%), Positives = 68/179 (37%), Gaps = 46/179 (25%)
Query: 129 PQP-VQPQQGYIPPMAQPGLPPVPGAPGMPPGIPPLMPGVPPLMPGMPPVMPGMPPGMMP 187
P P V P + P A PP PG PG+ P PGV P G+ P PG+ P P
Sbjct: 283 PAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAPGVHPPTSGVHPPAPGVHP---P 339
Query: 188 MGGMMPPGPGIPPLMPGM--------------------------------PPGMPPPVP- 214
G+ PP PG+ P PG+ PG+ PP P
Sbjct: 340 APGVHPPAPGVHPPAPGVHPPAPGVHPPPSAGVHPQAPGVHPAAPAVHPQAPGVHPPAPG 399
Query: 215 ----RPGIPPMTQAQAVSAPGILNRPPA-----PTATVPAPQPPVTKPLFPSAGQMGTP 264
PG+ P SAPG+ +PP P P P PP+ +P PS G P
Sbjct: 400 MHPQAPGVHPQPPGVHPSAPGVHPQPPGVHPSNPGVHPPTPMPPMLRPPLPSEGPGNIP 458
Score = 68.9 bits (167), Expect = 9e-12
Identities = 94/316 (29%), Positives = 107/316 (33%), Gaps = 94/316 (29%)
Query: 175 PPVMPGMPPGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILN 234
PP P +P G P G PP PPLM G+PP PP+P PP PG L
Sbjct: 217 PPAPPSLPAG--PPGVKRPP----PPLMNGLPPR--PPLPESLPPP--------PPGGLP 260
Query: 235 RPPAPTATVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKALFPSTAQAQA 294
PP P T PAP P P P P A
Sbjct: 261 LPPMPP-TGPAPSGPPGPPQLPPPAPGVHP----------------------------PA 291
Query: 295 AVQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATL 354
V P + P PA PP P TS + P A PA
Sbjct: 292 PVVHPPASGVHP----PAPGVHPPAPGVHPPAPGVHPPTSGVH-----PPAPGVHPPAPG 342
Query: 355 TTTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPG---QAPIGNPPVGPIGGMMPPQPG 411
A +HP P PG AP +PP P G+ P PG
Sbjct: 343 VHPPAPG--VHP--------------------PAPGVHPPAPGVHPP--PSAGVHPQAPG 378
Query: 412 I--------PQQQGMRPPMPP-HGQYGGHHQGMPGYLPGAMPPYGQGPPMVPPYQGG--P 460
+ PQ G+ PP P H Q G H PG P A P PP V P G P
Sbjct: 379 VHPAAPAVHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSA-PGVHPQPPGVHPSNPGVHP 437
Query: 461 PRP-PMGMRPPVMSQG 475
P P P +RPP+ S+G
Sbjct: 438 PTPMPPMLRPPLPSEG 453
Score = 68.9 bits (167), Expect = 9e-12
Identities = 50/132 (37%), Positives = 61/132 (46%), Gaps = 14/132 (10%)
Query: 140 PPMAQPGLPPVP----GAPGMPPG---IPPLMP-GVPPLMPGMPPVMPGMPPGMMPMGGM 191
PP GLPP P P PPG +PP+ P G P P PP +P PG+ P +
Sbjct: 234 PPPLMNGLPPRPPLPESLPPPPPGGLPLPPMPPTGPAPSGPPGPPQLPPPAPGVHPPAPV 293
Query: 192 M-PPGPGIPPLMPGM-PPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTATVPAP--Q 247
+ PP G+ P PG+ PP P PG+ P T APG+ PPAP PAP
Sbjct: 294 VHPPASGVHPPAPGVHPPAPGVHPPAPGVHPPTSGVHPPAPGV--HPPAPGVHPPAPGVH 351
Query: 248 PPVTKPLFPSAG 259
PP P+ G
Sbjct: 352 PPAPGVHPPAPG 363
Score = 64.7 bits (156), Expect = 2e-10
Identities = 48/120 (40%), Positives = 57/120 (47%), Gaps = 25/120 (20%)
Query: 134 PQQGYIPPMAQPGLPPVPGA------PGMPPGIP---PLMPGVPPLMPGMPPVMPGM--- 181
P G PP PG+ P P A PG+ P P P PGV P PGM P PG+
Sbjct: 353 PAPGVHPPA--PGVHPPPSAGVHPQAPGVHPAAPAVHPQAPGVHPPAPGMHPQAPGVHPQ 410
Query: 182 PPGMMPMG-GMMPPGPGIPPLMPGMPPGMP-PPVPRPGIPPMTQAQAVSAPGILNRPPAP 239
PPG+ P G+ P PG+ P PG+ P P PP+ RP +P PG N PP P
Sbjct: 411 PPGVHPSAPGVHPQPPGVHPSNPGVHPPTPMPPMLRPPLPS-------EGPG--NIPPPP 461
Score = 60.1 bits (144), Expect = 4e-09
Identities = 37/92 (40%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 132 VQPQQGYIPPMAQPGLPPVPGAPGMPPGIPPLMPGVPPLMPGMPPVMPGMPPGMMPMGGM 191
V PQ + P A P PG PG+ P PGV P PG+ P PG+ P G+
Sbjct: 372 VHPQAPGVHPAAPAVHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSAPGVHP---QPPGV 428
Query: 192 MPPGPGIPPLMPGMPPGMPPPVPRPG---IPP 220
P PG+ P P MPP + PP+P G IPP
Sbjct: 429 HPSNPGVHPPTP-MPPMLRPPLPSEGPGNIPP 459
Score = 57.4 bits (137), Expect = 3e-08
Identities = 37/92 (40%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 128 QPQPVQPQQGYIPPMAQPGLPPVPGAPGMPPGIPPLMPGVPPLMPGMPPVMPGMPPGMMP 187
Q V P + P A PP PG PG+ P PGV P PG+ P PPG+ P
Sbjct: 375 QAPGVHPAAPAVHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSAPGVHP----QPPGVHP 430
Query: 188 MG-GMMPPGPGIPPLMPGMP---PG-MPPPVP 214
G+ PP P P L P +P PG +PPP P
Sbjct: 431 SNPGVHPPTPMPPMLRPPLPSEGPGNIPPPPP 462
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 77.8 bits (190), Expect = 2e-14
Identities = 95/338 (28%), Positives = 120/338 (35%), Gaps = 38/338 (11%)
Query: 137 GYIPPMAQPGLPPVPGAPGMPPGIPPLMPGVPPLMPGMPPVMPGMPPGMMPMGGMMPPGP 196
G PP+ PG P PP P P P PP P MPP
Sbjct: 123 GSRPPLLPPGGRSTSAKPFSPPSGPGRFPVPSPGHRSGPPE---------PQRNRMPPPR 173
Query: 197 GIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTATVPAPQPPVTKPLFP 256
P + P +PPPVP T S+P PP P P P T P FP
Sbjct: 174 ---PDVGSKPDSIPPPVPS------TPRPIQSSPHNRGSPPVPGGP-RQPSPGPTPPPFP 223
Query: 257 SAGQMGTPVTSSSTASSN-SESLSASSKALFPSTAQAQAAVQGPVGTDFKPLNSTPATTT 315
G GT + S S S S S++ P T + P P+ + P+
Sbjct: 224 --GNRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPP--PPVGNRPSIHR 279
Query: 316 EPPKPTFPAYTQ-STASTTSTTNSTAAKPAASITSKPATLTTTSATSKLIHPDEDISLEE 374
E P P + ST + S+ A P S+P ++S DE L +
Sbjct: 280 EAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSS---GNDETPRLPQ 336
Query: 375 RRAQLPKYQRNLPRPGQAPIGNPPVGPIGGMMPPQPGIPQQQGMRPPMPPHGQYGGHHQG 434
R L LP PG++ G P P PP P + G PP PP + G +
Sbjct: 337 RNLSLSSSTPPLPSPGRS--GPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRA 394
Query: 435 MPG--YLPGA----MPPYGQGPPMVP--PYQGGPPRPP 464
+P LP P G PP+ P P G PP PP
Sbjct: 395 LPATPQLPSRSGVDSPRSGPRPPLPPDRPSAGAPPPPP 432
Score = 60.5 bits (145), Expect = 3e-09
Identities = 82/327 (25%), Positives = 102/327 (31%), Gaps = 63/327 (19%)
Query: 131 PVQPQQGYIPPMAQPGLPPVPGAPGMPPGIPPLMPGVP------PLMPGMPPVMPGMPPG 184
P +PQ+ +PP P P P IPP +P P P G PPV PG P
Sbjct: 161 PPEPQRNRMPP-------PRPDVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPV-PGGPRQ 212
Query: 185 MMPMGGMMPPGPGI------------PPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGI 232
P G PP PG PL P PP+P + P +
Sbjct: 213 PSP-GPTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPV 271
Query: 233 LNRPPAPTATVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKALFPSTAQA 292
NRP VP P P KP PS TP S+S+
Sbjct: 272 GNRPSIHREAVPPPPPQNNKPPVPS-----TPRPSASS---------------------- 304
Query: 293 QAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAK---PAASITS 349
QA P + P P+++ P P S +S+T S P
Sbjct: 305 QAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSER 364
Query: 350 KPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNPPVGPIGGMMPPQ 409
P + S + P +S + R LP Q P + P G PP
Sbjct: 365 PPPPVRDPPGRSGPLPPPPPVSRNGSTS------RALPATPQLPSRSGVDSPRSGPRPPL 418
Query: 410 PGIPQQQGMRPPMPPHGQYGGHHQGMP 436
P G PP PP Q P
Sbjct: 419 PPDRPSAGAPPPPPPSTSIRNGFQDSP 445
Score = 55.1 bits (131), Expect = 1e-07
Identities = 63/273 (23%), Positives = 89/273 (32%), Gaps = 22/273 (8%)
Query: 216 PGIPPMTQAQAVSAPGILNRPPAPTATVPAPQPP-----VTKPLFPSAGQMGTPVTSSST 270
PG+ + QA NR + P PP KP P +G PV S
Sbjct: 98 PGLGGLFQAGMPKLRSTANRDNDSGGSRPPLLPPGGRSTSAKPFSPPSGPGRFPVPSPGH 157
Query: 271 ASSNSESLSASSKALFPSTAQAQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAY-TQST 329
S E P ++ PV + +P+ S+P PP P P +
Sbjct: 158 RSGPPEPQRNRMPPPRPDVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGP 217
Query: 330 ASTTSTTNSTAAKPAASITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNLPR- 388
N A SI P + ++ + + P +L+++ P N P
Sbjct: 218 TPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSI 277
Query: 389 -----PGQAPIGNPPVGP------IGGMMPPQPGIPQQQGMRPPMPPHGQYGGHHQGMPG 437
P P N P P PP P P + G PP+PP +P
Sbjct: 278 HREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGP-PPLPPSSSGNDETPRLP- 335
Query: 438 YLPGAMPPYGQGPPMVPPYQGGPPRPPMGMRPP 470
+ PP+ P + GP PP RPP
Sbjct: 336 --QRNLSLSSSTPPLPSPGRSGPLPPPPSERPP 366
Score = 42.4 bits (98), Expect = 0.001
Identities = 40/159 (25%), Positives = 59/159 (37%), Gaps = 22/159 (13%)
Query: 111 DDSDEYDDDDSAASTSFQPQPVQPQQGYI-PPMAQPGLPPVPGAPGMPPGIPPLMPGVPP 169
D++ + + S+S P P + G + PP ++ PPV PG +PP PP
Sbjct: 329 DETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPP-----PP 383
Query: 170 LMPGMPPVMPGMPPGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSA 229
P G +P +P G+ G P +PP P G PP
Sbjct: 384 -----PVSRNGSTSRALPATPQLPSRSGVDSPRSGPRPPLPPDRPSAGAPPPPPPSTSIR 438
Query: 230 PGILNRPPA----------PTATVPAPQPPV-TKPLFPS 257
G + P P + +P P+P V T +PS
Sbjct: 439 NGFQDSPCEDEWESRFYFHPISDLPPPEPYVQTTKSYPS 477
Score = 35.8 bits (81), Expect = 0.088
Identities = 33/126 (26%), Positives = 45/126 (35%), Gaps = 36/126 (28%)
Query: 376 RAQLPKYQRNLPRPGQAPIGNPPVG---PIGGMMPPQPGIPQQQGMRPPMPPHGQYGGHH 432
R+ P+ QRN P + +G+ P P+ P P +G PP+P GG
Sbjct: 158 RSGPPEPQRNRMPPPRPDVGSKPDSIPPPVPSTPRPIQSSPHNRGS-PPVP-----GGPR 211
Query: 433 QGMPGYLPGAMP---------------------PYGQGPPMVPPYQGG------PPRPPM 465
Q PG P P P+ PP+ P PP PP+
Sbjct: 212 QPSPGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPV 271
Query: 466 GMRPPV 471
G RP +
Sbjct: 272 GNRPSI 277
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 77.8 bits (190), Expect = 2e-14
Identities = 95/338 (28%), Positives = 120/338 (35%), Gaps = 38/338 (11%)
Query: 137 GYIPPMAQPGLPPVPGAPGMPPGIPPLMPGVPPLMPGMPPVMPGMPPGMMPMGGMMPPGP 196
G PP+ PG P PP P P P PP P MPP
Sbjct: 123 GSRPPLLPPGGRSTSAKPFSPPSGPGRFPVPSPGHRSGPPE---------PQRNRMPPPR 173
Query: 197 GIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTATVPAPQPPVTKPLFP 256
P + P +PPPVP T S+P PP P P P T P FP
Sbjct: 174 ---PDVGSKPDSIPPPVPS------TPRPIQSSPHNRGSPPVPGGP-RQPSPGPTPPPFP 223
Query: 257 SAGQMGTPVTSSSTASSN-SESLSASSKALFPSTAQAQAAVQGPVGTDFKPLNSTPATTT 315
G GT + S S S S S++ P T + P P+ + P+
Sbjct: 224 --GNRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPP--PPVGNRPSIHR 279
Query: 316 EPPKPTFPAYTQ-STASTTSTTNSTAAKPAASITSKPATLTTTSATSKLIHPDEDISLEE 374
E P P + ST + S+ A P S+P ++S DE L +
Sbjct: 280 EAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSS---GNDETPRLPQ 336
Query: 375 RRAQLPKYQRNLPRPGQAPIGNPPVGPIGGMMPPQPGIPQQQGMRPPMPPHGQYGGHHQG 434
R L LP PG++ G P P PP P + G PP PP + G +
Sbjct: 337 RNLSLSSSTPPLPSPGRS--GPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRA 394
Query: 435 MPG--YLPGA----MPPYGQGPPMVP--PYQGGPPRPP 464
+P LP P G PP+ P P G PP PP
Sbjct: 395 LPATPQLPSRSGVDSPRSGPRPPLPPDRPSAGAPPPPP 432
Score = 60.5 bits (145), Expect = 3e-09
Identities = 82/327 (25%), Positives = 102/327 (31%), Gaps = 63/327 (19%)
Query: 131 PVQPQQGYIPPMAQPGLPPVPGAPGMPPGIPPLMPGVP------PLMPGMPPVMPGMPPG 184
P +PQ+ +PP P P P IPP +P P P G PPV PG P
Sbjct: 161 PPEPQRNRMPP-------PRPDVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPV-PGGPRQ 212
Query: 185 MMPMGGMMPPGPGI------------PPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGI 232
P G PP PG PL P PP+P + P +
Sbjct: 213 PSP-GPTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPV 271
Query: 233 LNRPPAPTATVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKALFPSTAQA 292
NRP VP P P KP PS TP S+S+
Sbjct: 272 GNRPSIHREAVPPPPPQNNKPPVPS-----TPRPSASS---------------------- 304
Query: 293 QAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAK---PAASITS 349
QA P + P P+++ P P S +S+T S P
Sbjct: 305 QAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSER 364
Query: 350 KPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNPPVGPIGGMMPPQ 409
P + S + P +S + R LP Q P + P G PP
Sbjct: 365 PPPPVRDPPGRSGPLPPPPPVSRNGSTS------RALPATPQLPSRSGVDSPRSGPRPPL 418
Query: 410 PGIPQQQGMRPPMPPHGQYGGHHQGMP 436
P G PP PP Q P
Sbjct: 419 PPDRPSAGAPPPPPPSTSIRNGFQDSP 445
Score = 55.1 bits (131), Expect = 1e-07
Identities = 63/273 (23%), Positives = 89/273 (32%), Gaps = 22/273 (8%)
Query: 216 PGIPPMTQAQAVSAPGILNRPPAPTATVPAPQPP-----VTKPLFPSAGQMGTPVTSSST 270
PG+ + QA NR + P PP KP P +G PV S
Sbjct: 98 PGLGGLFQAGMPKLRSTANRDNDSGGSRPPLLPPGGRSTSAKPFSPPSGPGRFPVPSPGH 157
Query: 271 ASSNSESLSASSKALFPSTAQAQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAY-TQST 329
S E P ++ PV + +P+ S+P PP P P +
Sbjct: 158 RSGPPEPQRNRMPPPRPDVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGP 217
Query: 330 ASTTSTTNSTAAKPAASITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNLPR- 388
N A SI P + ++ + + P +L+++ P N P
Sbjct: 218 TPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSI 277
Query: 389 -----PGQAPIGNPPVGP------IGGMMPPQPGIPQQQGMRPPMPPHGQYGGHHQGMPG 437
P P N P P PP P P + G PP+PP +P
Sbjct: 278 HREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGP-PPLPPSSSGNDETPRLP- 335
Query: 438 YLPGAMPPYGQGPPMVPPYQGGPPRPPMGMRPP 470
+ PP+ P + GP PP RPP
Sbjct: 336 --QRNLSLSSSTPPLPSPGRSGPLPPPPSERPP 366
Score = 42.4 bits (98), Expect = 0.001
Identities = 40/159 (25%), Positives = 59/159 (37%), Gaps = 22/159 (13%)
Query: 111 DDSDEYDDDDSAASTSFQPQPVQPQQGYI-PPMAQPGLPPVPGAPGMPPGIPPLMPGVPP 169
D++ + + S+S P P + G + PP ++ PPV PG +PP PP
Sbjct: 329 DETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPP-----PP 383
Query: 170 LMPGMPPVMPGMPPGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSA 229
P G +P +P G+ G P +PP P G PP
Sbjct: 384 -----PVSRNGSTSRALPATPQLPSRSGVDSPRSGPRPPLPPDRPSAGAPPPPPPSTSIR 438
Query: 230 PGILNRPPA----------PTATVPAPQPPV-TKPLFPS 257
G + P P + +P P+P V T +PS
Sbjct: 439 NGFQDSPCEDEWESRFYFHPISDLPPPEPYVQTTKSYPS 477
Score = 35.8 bits (81), Expect = 0.088
Identities = 33/126 (26%), Positives = 45/126 (35%), Gaps = 36/126 (28%)
Query: 376 RAQLPKYQRNLPRPGQAPIGNPPVG---PIGGMMPPQPGIPQQQGMRPPMPPHGQYGGHH 432
R+ P+ QRN P + +G+ P P+ P P +G PP+P GG
Sbjct: 158 RSGPPEPQRNRMPPPRPDVGSKPDSIPPPVPSTPRPIQSSPHNRGS-PPVP-----GGPR 211
Query: 433 QGMPGYLPGAMP---------------------PYGQGPPMVPPYQGG------PPRPPM 465
Q PG P P P+ PP+ P PP PP+
Sbjct: 212 QPSPGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPV 271
Query: 466 GMRPPV 471
G RP +
Sbjct: 272 GNRPSI 277
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 77.4 bits (189), Expect = 3e-14
Identities = 89/356 (25%), Positives = 120/356 (33%), Gaps = 38/356 (10%)
Query: 127 FQPQPVQPQQGYIPPMAQPGLPPVPGAPGMPP---GIPPLMPGVPPLMPGMPPVMPGMPP 183
F P P P Q P A P + P P P PPL VPP P PP+ P P
Sbjct: 665 FSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQ--VPPSPPASPPMSPSATP 722
Query: 184 GMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTATV 243
+ P +PP P PP P P P +PP+ A L PP+P A++
Sbjct: 723 PPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPP------LQVPPSPPASL 776
Query: 244 PAPQPPVTKPLFPSAGQMGTPVTSS--STASSNSESLSASSKALFPSTAQAQAAVQGPVG 301
P P+ KP + + TP + S +S S A P + A Q P
Sbjct: 777 --PMSPLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAP-- 832
Query: 302 TDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKP--AASITSKPATLTTTSA 359
P+ + P P P P T +++ + P ++ P + S
Sbjct: 833 ----PVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSP 888
Query: 360 TSKLIHPD---EDISLEERRAQLPKYQRNLPRPGQAPIGNPPVGPIGGMMPPQPGIPQQQ 416
+S L PD S +L Y G A PP + P +
Sbjct: 889 SSTLSGPDLAGHSSSATSTPEELRGYDSG--PEGGAAASPPPDAELAACHP----AAWSR 942
Query: 417 GMRPPMPPHGQYGGHHQGMPGYLPGAMPPY-----GQGPPMVPPYQGG-PPRPPMG 466
G PP+ G G P PG+ +GP P G P P G
Sbjct: 943 GPAPPLAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAPGALDPGPSPG 998
Score = 72.8 bits (177), Expect = 6e-13
Identities = 66/240 (27%), Positives = 91/240 (37%), Gaps = 17/240 (7%)
Query: 123 ASTSFQPQPVQPQQGYIPPMAQPGLPPVPGAPGMPPGIPPLMPG--VPPLMPGMPPVMPG 180
AS P P Q P +A P L P P PP P P PP + P +P
Sbjct: 681 ASPPVSPSATPPSQAP-PSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPP 739
Query: 181 MPPGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQ-AVSAPGILNRPPAP 239
PP PM P P +PPL+ PP PP P +P A+ AP L PP
Sbjct: 740 SPPASPPMSPSATPPPRVPPLLAA-PPLQVPPSPPASLPMSPLAKPPPQAPPALATPPLQ 798
Query: 240 TATVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGP 299
P P P PSA P++ +T + + A+ P + A +Q P
Sbjct: 799 ALPSPPASFPGQAPFSPSA---SLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAP 855
Query: 300 VGTDFKPLNSTPATTTEPPKPTF-----PAYTQSTASTTSTTNSTAAKPAASITSKPATL 354
+P P T+ P+ T P S + +++ + A ++S TS P L
Sbjct: 856 ----RRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEEL 911
Score = 71.2 bits (173), Expect = 2e-12
Identities = 101/352 (28%), Positives = 136/352 (38%), Gaps = 46/352 (13%)
Query: 143 AQPGLPPVPGAPGMPPGIPPLMPGVPPLMPGMPPVMPGMPPGMMPMGGMMPPGPGIPPLM 202
A+P PP A +P +PP P PL P PP P PP + +P P PP
Sbjct: 314 ARPVPPPDNAATPLPATLPPSPPLATPL-PLAPP-SPSAPPSLQ----TLPSPPATPPSQ 367
Query: 203 PGMPPGM-PPPVPRP----GIPPMTQAQAVSAPGILNRPPAP--------TATVPAPQPP 249
PP M PP+ P IPP+ ++++P L PP+P T ++ +P
Sbjct: 368 --APPSMTTPPMQAPPSLQTIPPIQVPHSLTSPS-LQAPPSPLALSSLQATTSLGSPTLQ 424
Query: 250 VTKP-LFPSAGQMGTPVTS-SSTASSNSESLSASSKALFPSTAQAQAAVQGPVGTDFKPL 307
T L S Q +TS S AS+ +S + P++ Q ++ V PL
Sbjct: 425 ATHSFLTMSPRQTQASLTSPSRPASTPPDSPPLQAPLSLPASPPLQTSLSPAVSPLSSPL 484
Query: 308 NSTPATTTEPPKPTFP-AYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSATS--KLI 364
P P A S T S+ A P S+ + PA+LTT + L
Sbjct: 485 TIHPLQALSSLASHSPQAPLSSLIMPPLETQSSLAPP--SLQTPPASLTTPPLENLPSLA 542
Query: 365 HPDEDISLEERRAQL-PKYQRNLPRPGQAPIGNPPVGPIGGMMPPQPGIPQQQGMRPPMP 423
P L+ A L + P P P+ PP + P P P PP
Sbjct: 543 PP----PLQTASAPLTTPHLETPPCPAPCPLQAPP----SPLTTPPPETPSSIATPPPQA 594
Query: 424 PHGQYGGHHQGMPG--YLPGAMPPYGQGPP--MVPPYQGGPPRPPMGMRPPV 471
P QG+P P A PP Q PP +PP Q PP PP PP+
Sbjct: 595 PPALASPPLQGLPSPPLSPLATPP-PQAPPXLALPPLQ-APPSPPAS--PPL 642
Score = 71.2 bits (173), Expect = 2e-12
Identities = 96/398 (24%), Positives = 133/398 (33%), Gaps = 76/398 (19%)
Query: 129 PQPVQPQQGYIPPMAQPGLPPVPGAPGMPPGIPPLMPGVPPLMPGMPPVMPGMPPGMMP- 187
P P+ P P A P L +P P PP P PP+ PP + +PP +P
Sbjct: 340 PLPLAPPS----PSAPPSLQTLPSPPATPPSQAPPSMTTPPMQ--APPSLQTIPPIQVPH 393
Query: 188 ----MGGMMPPGP-GIPPLMPGMPPGMPPPVPRPGI----PPMTQAQAVSAPGILNRPP- 237
PP P + L G P P TQA S + PP
Sbjct: 394 SLTSPSLQAPPSPLALSSLQATTSLGSPTLQATHSFLTMSPRQTQASLTSPSRPASTPPD 453
Query: 238 APTATVP---APQPPVTKPLFPSAGQMGTPVT---SSSTASSNSESLSASSKALFPSTAQ 291
+P P PP+ L P+ + +P+T + +S S S A +L +
Sbjct: 454 SPPLQAPLSLPASPPLQTSLSPAVSPLSSPLTIHPLQALSSLASHSPQAPLSSLIMPPLE 513
Query: 292 AQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQ---STASTTSTTNSTAAKPAAS-- 346
Q+++ P L + PA+ T PP P+ TAS TT P +
Sbjct: 514 TQSSLAPP------SLQTPPASLTTPPLENLPSLAPPPLQTASAPLTTPHLETPPCPAPC 567
Query: 347 -ITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKY-----QRNLPRPGQAPIGNPP-- 398
+ + P+ LTT P+ S+ Q P + LP P +P+ PP
Sbjct: 568 PLQAPPSPLTTPP-------PETPSSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQ 620
Query: 399 ------------------VGPIGGMMPPQPGIPQ-------QQGMRPPMPPHGQYGGHHQ 433
P+ + P P P Q PP P Q
Sbjct: 621 APPXLALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPP 680
Query: 434 GMPGYLPGAMPPYGQGPPMVPPYQGGPPRPPMGMRPPV 471
P P A PP P + P PP PP PP+
Sbjct: 681 ASPPVSPSATPPSQAPPSLAAPPLQVPPSPPAS--PPM 716
Score = 70.5 bits (171), Expect = 3e-12
Identities = 90/374 (24%), Positives = 121/374 (32%), Gaps = 58/374 (15%)
Query: 140 PPMAQPGL--PPVPGAPGMP--------PGIPPLMPGVPPLM-PGMPPVMPGMPPGMMP- 187
PP A P L PP+ G P P P PP + +PPL P PP P + P P
Sbjct: 591 PPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXL-ALPPLQAPPSPPASPPLSPLATPS 649
Query: 188 -----------MGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRP 236
+ P P P P PP PP P PP +++AP L P
Sbjct: 650 PQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSP-SATPPSQAPPSLAAPP-LQVP 707
Query: 237 PAPTATVP----------APQPPVTKPL-FPSAGQMGTPVTSSSTASSNSESLSASSKAL 285
P+P A+ P AP P PL P + P++ S+T L A+
Sbjct: 708 PSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQ 767
Query: 286 FPSTAQAQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAA 345
P + A P+ KP P PP P + S P+A
Sbjct: 768 VPPSPPASL----PMSPLAKPPPQAPPALATPPLQALP------SPPASFPGQAPFSPSA 817
Query: 346 SITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPG-QAPIGNP--PVGPI 402
S+ P A L P + + + R P PG + P +
Sbjct: 818 SLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALA 877
Query: 403 GGMMPPQPGIPQQQGMRPPMPPHG--------QYGGHHQGMPGYLPGAMPPYGQGPPMVP 454
G PP P P + H + G+ G G + PP + P
Sbjct: 878 PGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHP 937
Query: 455 PYQGGPPRPPMGMR 468
P PP+ R
Sbjct: 938 AAWSRGPAPPLAFR 951
Score = 68.6 bits (166), Expect = 1e-11
Identities = 87/338 (25%), Positives = 115/338 (34%), Gaps = 28/338 (8%)
Query: 134 PQQGYIPPMAQPGLPPVPGAPGMPPGIPPLMPGVPPL--MPGMPPVMP-GMPPGMMPMGG 190
P Q P+ P P P + PP P PPL +P PP+ P PP P
Sbjct: 568 PLQAPPSPLTTPP-PETPSSIATPPPQAPPALASPPLQGLPS-PPLSPLATPPPQAPPXL 625
Query: 191 MMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTATVPAPQPPV 250
+PP PP P PP P P P P + AP + PP+P P PP
Sbjct: 626 ALPPLQA-PPSPPASPPLSPLATPSPQAPNALAVHLLQAP--FSPPPSPPVQAPF-SPPA 681
Query: 251 TKPLFPSAGQMGTPVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPVGTDFKPLNST 310
+ P+ PSA P + + ++ + S A P + A Q P P +
Sbjct: 682 SPPVSPSA---TPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAP------PPLAA 732
Query: 311 PATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSATSKLIHPDEDI 370
P P P P + S AA P S PA+L + +
Sbjct: 733 PPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPAL 792
Query: 371 SLEERRAQLPKYQRNLPRPGQAPIGNPPVGPIGGMMPPQPGIPQQQG----MRPPMPPHG 426
+ +A LP + PGQAP P+ + P P P PP PP
Sbjct: 793 ATPPLQA-LPSPPASF--PGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPAS 849
Query: 427 QYGGHHQGMPGYLPGAMPPYGQGPPMVPPYQGGPPRPP 464
+ P P GP + GPP PP
Sbjct: 850 PTLQAPRRPPTPGPDTSV---SGPRLTLALAPGPPPPP 884
Score = 68.2 bits (165), Expect = 2e-11
Identities = 97/371 (26%), Positives = 129/371 (34%), Gaps = 58/371 (15%)
Query: 146 GLPPVPGAPGMPP--GIPPLMPGVPPLMPGMPPVMPGMPP-GMMPMGGMMPPGPGIPPLM 202
G P P P P G+ L P P + P P + P P+ P G P+
Sbjct: 261 GTPRAPAHPSQPKPKGLQALRP--PQVTPPRKDAAPALGPLSSSPLATPSPSGTKARPVP 318
Query: 203 PG------MPPGMPP----PVPRPGIPPMTQAQAVSAPGILNRPPAPTATVPAPQPP-VT 251
P +P +PP P P PP + SAP L P+P AT P+ PP +T
Sbjct: 319 PPDNAATPLPATLPPSPPLATPLPLAPP-----SPSAPPSLQTLPSPPATPPSQAPPSMT 373
Query: 252 KPLFPSAGQMGTPVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGP---VGTDFKPLN 308
P + + T S S SL A L S+ QA ++ P F ++
Sbjct: 374 TPPMQAPPSLQTIPPIQVPHSLTSPSLQAPPSPLALSSLQATTSLGSPTLQATHSFLTMS 433
Query: 309 --STPATTTEPPKPT-----FPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSATS 361
T A+ T P +P P + S T+ PA S S P T+ A S
Sbjct: 434 PRQTQASLTSPSRPASTPPDSPPLQAPLSLPASPPLQTSLSPAVSPLSSPLTIHPLQALS 493
Query: 362 KLIHPDEDISLEERRAQLPKYQRNLPRPG----QAPIGNPPVGPIGGMMPPQPGIPQQQG 417
L L + Q +L P A + PP+ + + PP P Q
Sbjct: 494 SLASHSPQAPLSSLIMPPLETQSSLAPPSLQTPPASLTTPPLENLPSLAPP----PLQTA 549
Query: 418 MRPPMPPHGQYGGHHQGMPGYLPG--------------AMPPYGQGPPMV--PPYQG--G 459
P PH + P P A PP Q PP + PP QG
Sbjct: 550 SAPLTTPHLETPPCPAPCPLQAPPSPLTTPPPETPSSIATPP-PQAPPALASPPLQGLPS 608
Query: 460 PPRPPMGMRPP 470
PP P+ PP
Sbjct: 609 PPLSPLATPPP 619
Score = 64.7 bits (156), Expect = 2e-10
Identities = 59/223 (26%), Positives = 82/223 (36%), Gaps = 45/223 (20%)
Query: 124 STSFQPQPVQPQQGYIPPMAQPGLPPVPGAPGM---PPGIPPLMPGVPPLMPG------M 174
S + P V P PPM+ PP P + P +PP P PP+ P +
Sbjct: 698 SLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRV 757
Query: 175 PPVM-------PGMPPGMMPMGGMMPPGPGIPPLM-----------PGMPPGMPPPVPRP 216
PP++ P PP +PM + P P PP + P PG P P
Sbjct: 758 PPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSA 817
Query: 217 GIP------PMTQAQAVSAPGILNRPPAPTAT----------VPAPQPPVTKPLFPSAGQ 260
+P P QA V A +L PP+P A+ P P V+ P A
Sbjct: 818 SLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALA 877
Query: 261 MGTPVTSSSTASS--NSESLSASSKALFPSTAQAQAAVQGPVG 301
G P S + SS + L+ S + + + + GP G
Sbjct: 878 PGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEG 920
Score = 62.4 bits (150), Expect = 9e-10
Identities = 84/376 (22%), Positives = 124/376 (32%), Gaps = 50/376 (13%)
Query: 123 ASTSFQPQPVQPQQGYI---PPMAQPGLPPVPGAPGMPPGIPPLMPGVPPLMPGMPPVMP 179
A+TS +Q ++ P Q L PP PPL P +P PP+
Sbjct: 414 ATTSLGSPTLQATHSFLTMSPRQTQASLTSPSRPASTPPDSPPLQ--APLSLPASPPLQT 471
Query: 180 GMPPGMMPMGGMM---------------PPGPGIPPLMPGM-------PPGMPPPVPRPG 217
+ P + P+ + P P +MP + PP + P
Sbjct: 472 SLSPAVSPLSSPLTIHPLQALSSLASHSPQAPLSSLIMPPLETQSSLAPPSLQTPPASLT 531
Query: 218 IPPMTQAQAVSAPGILNRPPAPTATVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSES 277
PP+ +++ P P TA+ P P + P P+ + P + +T + S
Sbjct: 532 TPPLENLPSLAPP------PLQTASAPLTTPHLETPPCPAPCPLQAPPSPLTTPPPETPS 585
Query: 278 LSASSKALFPSTAQAQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTN 337
A+ P A A +QG PL + P PP P + S
Sbjct: 586 SIATPPPQAPP-ALASPPLQGLPSPPLSPLATPPPQA--PPXLALPPLQAPPSPPASPPL 642
Query: 338 STAAKPAASITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAP--IG 395
S A P+ + A + S P + P + P QAP +
Sbjct: 643 SPLATPSPQAPNALAVHLLQAPFSP--PPSPPVQAPFSPPASPPVSPSATPPSQAPPSLA 700
Query: 396 NPPVGPIGGMMPPQPGIPQQQGMRPPMPPHGQYGGHHQGMPGYLPGAMPPYGQGPPMVPP 455
PP+ +PP P P M P P Q P +P + P PPM P
Sbjct: 701 APPL-----QVPPSP--PASPPMSPSATPPPQAPPPLAAPPLQVPPSPPA---SPPMSPS 750
Query: 456 YQGGPPRPPMGMRPPV 471
P PP+ PP+
Sbjct: 751 ATPPPRVPPLLAAPPL 766
Score = 50.1 bits (118), Expect = 5e-06
Identities = 86/348 (24%), Positives = 113/348 (32%), Gaps = 46/348 (13%)
Query: 149 PVPGAPGMPPGIPPLMPGVPPLMPGMPPVMPGMPPGMMPMGGMMPPGPGIPPLMPGMPPG 208
P APG+ PP P PP P P + +G G G G
Sbjct: 17 PAARAPGLLTPRPPGSPRPPP---------PVTPAALRVLGAAGAVGRKPLAERAGGIGG 67
Query: 209 MPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTATVPAPQPPVTKPLFPSAGQMGTPVTSS 268
P P P T++ S+ +RPPA AP T P PV+S
Sbjct: 68 ATIPESAPRAGP-TRSAGTSSRNPASRPPASGRGERAPPAKNTSP---------GPVSSP 117
Query: 269 STASSNSESLSASSKALFPSTAQAQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQS 328
AS + K L S + A + L++ T P P P+ +
Sbjct: 118 GRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMA 177
Query: 329 TASTTSTTNSTAAKPAASITSKPATL-TTTSATSKLIHPDEDISLEERRAQLPKYQRNLP 387
S + T +PA S +P T S +S H + S RR P L
Sbjct: 178 RRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRR--PSAGGGLQ 235
Query: 388 RPGQ-------APIGNPP-VGPIGGMMPPQPGIPQQ------QGMRPP-MPPHGQYGGHH 432
RP P+ +P GP P P P Q Q +RPP + P +
Sbjct: 236 RPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPA 295
Query: 433 QGMPGYLPGAMP-PYGQGPPMVPPYQGG--------PPRPPMGMRPPV 471
G P A P P G VPP PP PP+ P+
Sbjct: 296 LGPLSSSPLATPSPSGTKARPVPPPDNAATPLPATLPPSPPLATPLPL 343
Score = 45.8 bits (107), Expect = 8e-05
Identities = 85/369 (23%), Positives = 123/369 (33%), Gaps = 43/369 (11%)
Query: 122 AASTSFQPQPVQPQQGYIPPMAQPGLPPVPGAPGMPPGIPPLM-PGVPPLMPGMPPVMPG 180
A S +P P++ P P A P L P L P+
Sbjct: 193 APSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSP 252
Query: 181 MPPGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPT 240
G G P P G+ PP V P +S+ + P+ T
Sbjct: 253 ARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSGT 312
Query: 241 ATVPAPQPP-VTKPL---FPSAGQMGTPVTSSSTASSNSESLSASSKALFPSTAQAQAAV 296
P P P PL P + + TP+ + + S SL P+T +QA
Sbjct: 313 KARPVPPPDNAATPLPATLPPSPPLATPLPLAPPSPSAPPSLQTLPSP--PATPPSQA-- 368
Query: 297 QGPVGTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTT 356
P P+ + P+ T PP Q S TS + P A ++S AT +
Sbjct: 369 --PPSMTTPPMQAPPSLQTIPP-------IQVPHSLTSPSLQAPPSPLA-LSSLQATTSL 418
Query: 357 TSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNPPV-GPIGGMMPPQPGIPQQ 415
S T + H +S + +A L + RP P +PP+ P+ +P P P Q
Sbjct: 419 GSPTLQATHSFLTMSPRQTQASL----TSPSRPASTPPDSPPLQAPLS--LPASP--PLQ 470
Query: 416 QGMRPPMPPHGQYGGHH-----QGMPGYLPGA------MPPYGQGPPMVPPYQGGPP--- 461
+ P + P H + + P A MPP + PP PP
Sbjct: 471 TSLSPAVSPLSSPLTIHPLQALSSLASHSPQAPLSSLIMPPLETQSSLAPPSLQTPPASL 530
Query: 462 -RPPMGMRP 469
PP+ P
Sbjct: 531 TTPPLENLP 539
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 76.6 bits (187), Expect = 4e-14
Identities = 110/407 (27%), Positives = 139/407 (34%), Gaps = 102/407 (25%)
Query: 98 EQKTQESQKKKQQDDSDEYDDDDSAASTSFQPQPVQPQQ-GYIPPMAQPGLPP---VPGA 153
+++ QE K+QQ + SA T P P QP G +P P PP PGA
Sbjct: 648 QRQQQEQLLKQQQQHQWQQHQQGSAPPTPVPPSPPQPVTLGAVPAPQAPPPPPKALYPGA 707
Query: 154 PGMPPGIPP---------LMPGVPP-LMPGMPPV---MPGM-PPGMMPM------GGMMP 193
G PP +PP + P V P L+ G PP+ PG+ P G++P G
Sbjct: 708 LGRPPPMPPMNFDPRWMMIPPYVDPRLLQGRPPLDFYPPGVHPSGLVPRERSDSGGSSSE 767
Query: 194 PGPGIPPLM---PGMPPGMP------------PPVPRPGIPPMTQAQAVSAPGILNRPPA 238
P P M G PP P P PRP P+ QA G+ + P
Sbjct: 768 PFDRHAPAMLRERGTPPVDPKLAWVGDVFTATPAEPRPLTSPLRQAADEDDKGMRSETP- 826
Query: 239 PTATVPAPQPP---VTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKALFPSTAQAQAA 295
P P PP + P FP G G P++ FP
Sbjct: 827 -----PVPPPPPYLASYPGFPENGAPGPPISR------------------FPLEEPGPRP 863
Query: 296 VQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITS---KPA 352
+ P G+D TP EPPK + TA T KPA + S P
Sbjct: 864 LPWPPGSDEVAKIQTPPPKKEPPK-------EETAQLTGP--EAGRKPARGVGSGGQGPP 914
Query: 353 TLTTTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNPPVGPIGGMMPPQPGI 412
S T P S R +P + P PI PP +PP+
Sbjct: 915 PPRRESRTETRWGPRPGSS----RRGIPPEEPGAPPRRAGPIKKPPPPTKVEELPPK--- 967
Query: 413 PQQQGMRPPMPP--------HGQYGGHHQGMPGYLPGAMPPYGQGPP 451
P +QG P PP G+ GG P PP G P
Sbjct: 968 PLEQGDETPKPPKPDPLKITKGKLGG---------PKETPPNGNLSP 1005
Score = 48.5 bits (114), Expect = 1e-05
Identities = 72/277 (25%), Positives = 100/277 (36%), Gaps = 37/277 (13%)
Query: 184 GMMPMGGMMPPGPGIPPLMP---GMPPGMPPPVPRPGI---PPMTQAQAVSAPGILNRPP 237
G + + MPP +P L G P + VP+ G Q+ S+ +PP
Sbjct: 48 GKVAIARRMPPPANLPSLKAENKGNDPNVSL-VPKDGTGWASKQEQSDPKSSDASTAQPP 106
Query: 238 APTATVPAPQPPVT-KPLFPSAGQMGTPVTSSSTASSNSESLSASSKALFPSTAQAQAAV 296
+ +PA Q P + +P P A TP+ S S AQA+V
Sbjct: 107 E-SQPLPASQTPASNQPKRPPAAPENTPLVPSGVKS------------------WAQASV 147
Query: 297 QGPVGTDFKPLNSTPATTTEPPKPTFPAY-TQSTASTTSTTNSTAAKPAASITSKPATLT 355
D +S + + PT A Q A+ + ++ P S+ + +T
Sbjct: 148 THGAHGDGGRASSLLSRFSREEFPTLQAAGDQDKAAKERESAEQSSGPGPSLRPQNSTTW 207
Query: 356 TTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNPPVGPIGGMMPPQPGIPQQ 415
PDE LE ++L + + PR G P G P P GMMPP P
Sbjct: 208 RDGGGRG---PDE---LEGPDSKL--HHGHDPRGGLQPSGPPQFPPYRGMMPPFM-YPPY 258
Query: 416 QGMRPPMPPHGQYGGHHQGMPGYLPGAMPPYGQGPPM 452
PP P G Y P P P G GPPM
Sbjct: 259 LPFPPPYGPQGPYRYPTPDGPSRFPRVAGPRGSGPPM 295
Score = 45.8 bits (107), Expect = 8e-05
Identities = 91/417 (21%), Positives = 118/417 (28%), Gaps = 71/417 (17%)
Query: 93 RRRLLEQKTQESQKKKQQDDSDEYDDDDSAASTSFQPQPVQPQQGYIPPMAQPGLPPVPG 152
RR E++ QE ++ + D+ A + +P P P P P
Sbjct: 470 RREEEERRMQEERRAACAEKLKRLDEKFGAPDKRLKAEPAAP----------PAAPSTPA 519
Query: 153 APGMPPGIPPLMPGVPPLMPGMPPVMPGMPPGMMPMGGMMPPGPGIPPLMPGMPPGMPPP 212
P P P P PP P P P P PG P +
Sbjct: 520 PPPAVPKELPAPPAPPPASAPTPETEPEEPAQAPPAQSTPTPGVAAAPTL---------- 569
Query: 213 VPRPGIPPMTQAQAVSAPGILNRPPAPTATVPAPQ---PPVTKPLFPSAGQMGTPVTSSS 269
V G T + + A + P P+ P P PP T P P G + +
Sbjct: 570 VSGGGSTSSTSSGSFEASPV--EPQLPSKEGPEPPEEVPPPTTPPVPKVEPKGDGIGPTR 627
Query: 270 TASSNSESLSASSKAL---FPSTAQAQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAYT 326
S K+L F Q Q Q + + T PP P P
Sbjct: 628 QPPSQGLGYPKYQKSLPPRFQRQQQEQLLKQQQQHQWQQHQQGSAPPTPVPPSPPQPVTL 687
Query: 327 QST-ASTTSTTNSTAAKPAASITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRN 385
+ A A P A P +I P D L + R L Y
Sbjct: 688 GAVPAPQAPPPPPKALYPGALGRPPPMPPMNFDPRWMMIPPYVDPRLLQGRPPLDFYPPG 747
Query: 386 LPRPGQAP------------------------IGNPPVGP----IGGMMPPQPGIPQQQG 417
+ G P G PPV P +G + P P
Sbjct: 748 VHPSGLVPRERSDSGGSSSEPFDRHAPAMLRERGTPPVDPKLAWVGDVFTATPAEP---- 803
Query: 418 MRPPMPPHGQYGGH-HQGMPGYLPGAMPPYGQGPPMVPPYQG----GPPRPPMGMRP 469
RP P Q +GM P PP PP + Y G G P PP+ P
Sbjct: 804 -RPLTSPLRQAADEDDKGMRSETPPVPPP----PPYLASYPGFPENGAPGPPISRFP 855
Score = 42.0 bits (97), Expect = 0.001
Identities = 109/512 (21%), Positives = 161/512 (31%), Gaps = 163/512 (31%)
Query: 66 PNAIPGRTDIELEIYGMEGIPEKDMDERRRLLEQKTQESQKKKQQDDSDEYDDDDSAAST 125
P A GRT E EG +++ +RRR ++ + E + D A S
Sbjct: 1076 PPAPRGRTASETR---SEGSEYEEIPKRRR-----------QRGSETGSETHESDLAPSD 1121
Query: 126 SFQPQPVQPQQGYIPPMAQPGLPPVPGAPGMPPGIPPLMPGVPPLMPGMPPVMPGMPPGM 185
P P ++G + + P PP PGAP P P
Sbjct: 1122 KEAPTP---KEGTLTQV--PLAPPPPGAPPSPA-----------------------PARF 1153
Query: 186 MPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTATVPA 245
GG + G+P G G PPP PG P ++ A P PT +P
Sbjct: 1154 TARGGRVFTPRGVPSRR-GRGGGRPPPQVCPGWSPPAKSLAPKKP--------PTGPLPP 1204
Query: 246 PQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGP------ 299
+ P+ + L P G + +PV + ++ + + +AQ + P
Sbjct: 1205 SKEPLKEKLIP--GPL-SPVARGGSNGGSNVGMEDGERPRRRRHGRAQQQDKPPRFRRLK 1261
Query: 300 -------VGTDFKPLNSTPATTTEPPK-----PTFPAYTQSTASTTSTTNSTA------- 340
G++ KP + PA+ P + PA ++ A + +N +
Sbjct: 1262 QERENAARGSEGKPSLTLPASAPGPEEALTTVTVAPAPRRAAAKSPDLSNQNSDQANEEW 1321
Query: 341 --AKPAASITSK--------PATLTTTSAT-------------------SKLIHPDEDIS 371
A ++ TS+ P L T A L +D+S
Sbjct: 1322 ETASESSDFTSERRGDKEAPPPVLLTPKAVGTPGGGGGGAVPGISAMSRGDLSQRAKDLS 1381
Query: 372 LEERRAQLPKYQRNLPRPGQ----------------APIGNPPVG---------PIGGMM 406
+Q P +R RPG P G G P
Sbjct: 1382 KRSFSSQRPGMERQNRRPGPGGKAGSSGSSSGGGGGGPGGRTGPGRGDKRSWPSPKNRSR 1441
Query: 407 PPQ---PGIPQQQGMRPPMPP------------HGQYGGHHQGMPGY--------LPGAM 443
PP+ PG+P PP PP H G Q + PG
Sbjct: 1442 PPEERPPGLP-----LPPPPPSSSAVFRLDQVIHSNPAGIQQALAQLSSRQGSVTAPGGH 1496
Query: 444 PPYGQGPPMVPPYQGGPPRPPMGMRPPVMSQG 475
P + G P P QG PRPP P ++ G
Sbjct: 1497 PRHKPGLPQAP--QGPSPRPPTRYEPQRVNSG 1526
Score = 39.7 bits (91), Expect = 0.006
Identities = 28/80 (35%), Positives = 32/80 (40%), Gaps = 9/80 (11%)
Query: 154 PGMPPGIPPLMPGVPPLMPGMPPVMPGMPPGMMPMGGMMPPGPGIPPLMPGMPPGMPPPV 213
P PP PP +PP M PP +P PP P G P P P P +
Sbjct: 237 PSGPPQFPPYRGMMPPFM--YPPYLP-FPPPYGPQGPYRYPTPDGPSRFPRVAG------ 287
Query: 214 PRPGIPPMTQAQAVSAPGIL 233
PR PPM + V P IL
Sbjct: 288 PRGSGPPMRLVEPVGRPSIL 307
Score = 39.7 bits (91), Expect = 0.006
Identities = 78/329 (23%), Positives = 108/329 (32%), Gaps = 68/329 (20%)
Query: 203 PGMPPGMPPPVPRPGIPPMTQAQAVS--APGILNRPPAPTATVPAPQ---PPVTKPLFPS 257
P PG PP P+P +PP + A + PG P PAP+ + S
Sbjct: 399 PETEPG--PPAPKPPLPPPHRGPAGNWGPPGDYPDRGGPPCKPPAPEDEDEAWRQRRKQS 456
Query: 258 AGQMGTPVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPVGTDFKPLNSTPA----- 312
+ ++ V + E + + A+ + G K L + PA
Sbjct: 457 SSEISLAVERARRRREEEERRMQEERR--AACAEKLKRLDEKFGAPDKRLKAEPAAPPAA 514
Query: 313 -TTTEPPK------PTFPAYTQSTASTTST-TNSTAAKPAASITSKPATLT--------- 355
+T PP P PA ++A T T A P A T P
Sbjct: 515 PSTPAPPPAVPKELPAPPAPPPASAPTPETEPEEPAQAPPAQSTPTPGVAAAPTLVSGGG 574
Query: 356 TTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNPPVGPIGGMMPP--QP--- 410
+TS+TS + + + P+ +P P P+ P V P G + P QP
Sbjct: 575 STSSTSSGSFEASPVEPQLPSKEGPEPPEEVPPPTTPPV--PKVEPKGDGIGPTRQPPSQ 632
Query: 411 --GIPQQQGMRPP------------MPPHGQYGGHHQGMPGYLP-----------GAMP- 444
G P+ Q PP Q+ H QG P GA+P
Sbjct: 633 GLGYPKYQKSLPPRFQRQQQEQLLKQQQQHQWQQHQQGSAPPTPVPPSPPQPVTLGAVPA 692
Query: 445 PYGQGPPMVPPYQGG----PPRPPMGMRP 469
P PP Y G PP PPM P
Sbjct: 693 PQAPPPPPKALYPGALGRPPPMPPMNFDP 721
Score = 36.6 bits (83), Expect = 0.052
Identities = 89/348 (25%), Positives = 114/348 (32%), Gaps = 71/348 (20%)
Query: 175 PPVMPGMPPGMMPMGGMMPPGPGIPPLMPGM-PPGMPPPVPRPGIPPMTQAQAVSAPGIL 233
PP PG G P+ + GP PG PP PPP P G + PG +
Sbjct: 1683 PPKRPG---GSSPLNAVPCEGP------PGSEPPRRPPPAPHDGDRKELPREQPLPPGPI 1733
Query: 234 NRPPA---PTATVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKALFPSTA 290
+ T P P P +P P Q GT S +SL A + TA
Sbjct: 1734 GTERSQRTDRGTEPGPIRPSHRPGPPV--QFGTSDKDSDLRLVVGDSLKAEKEL----TA 1787
Query: 291 QAQAAVQGPVGTDFKPLNSTPATTTEPPKPTF------PAYTQSTASTTSTTNSTAAKPA 344
A+ PV D++ L S A + EP P + S +A P+
Sbjct: 1788 SVTEAI--PVSRDWELLPSA-AASAEPQSKNLDSGHCVPEPSSSGQRLYPEVFYGSAGPS 1844
Query: 345 ASITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNPPVG---- 400
+S S A + S P SL R+Q P Y P P A + +
Sbjct: 1845 SSQISGGAMDSQLHPNSGGFRPGTP-SLHPYRSQ-PLYLPPGPAPPSALLSGLALKGQFL 1902
Query: 401 -------------PIGGMMPPQPGIPQQQGMRP-PMP-------------PHGQYGGHHQ 433
P GG++ P P P P+P P Y Q
Sbjct: 1903 DFSTMQATELGKLPAGGVLYPPPSFLYSPAFCPSPLPDTSLLQVRQDLPSPSDFYSTPLQ 1962
Query: 434 --GMPGYLPGAMPPYGQGPPMV----PPYQGG--PPRPPMGMRPPVMS 473
G G+LP P PMV P G PP PP PP +S
Sbjct: 1963 PGGQSGFLPSGAPAQQMLLPMVDSQLPVVNFGSLPPAPPPA--PPPLS 2008
Score = 34.3 bits (77), Expect = 0.26
Identities = 39/149 (26%), Positives = 59/149 (39%), Gaps = 23/149 (15%)
Query: 176 PVMPGMPPGMMPMGG-----MMPPGPGIPPLMP--GMPPGMPPPVPRPGIPPMTQAQAVS 228
P+ PG G +P G ++P P++ +PP PP P + P+ A+
Sbjct: 1960 PLQPGGQSGFLPSGAPAQQMLLPMVDSQLPVVNFGSLPPAPPPAPPPLSLLPV--GPALQ 2017
Query: 229 APGILNRPPAPTATVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKALFPS 288
P + RPP AT P P +P FP++ +G + SS P
Sbjct: 2018 PPSLAVRPPPAPATRVLPSP--ARP-FPAS--LGRAELHPVELKPFQDYQKLSSNLGGPG 2072
Query: 289 TAQAQAAVQGPVGTDFKPLNS----TPAT 313
+++ P G F LNS TP+T
Sbjct: 2073 SSRTP-----PTGRSFSGLNSRLKATPST 2096
Score = 30.8 bits (68), Expect = 2.8
Identities = 43/162 (26%), Positives = 57/162 (35%), Gaps = 28/162 (17%)
Query: 120 DSAASTSFQPQPVQP--QQGYIP---PMAQPGLPPVPGAPGMPPGIPPLMPGVPPLMPGM 174
D + + F P+QP Q G++P P Q LP V +P +P PP P
Sbjct: 1949 DLPSPSDFYSTPLQPGGQSGFLPSGAPAQQMLLPMVDSQ--LPVVNFGSLPPAPP--PAP 2004
Query: 175 PPVMPGMPPGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILN 234
PP+ ++P+G P L P PPP P + P + A P L
Sbjct: 2005 PPL------SLLPVG---------PALQPPSLAVRPPPAPATRVLP---SPARPFPASLG 2046
Query: 235 RPPA-PTATVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNS 275
R P P G TP T S + NS
Sbjct: 2047 RAELHPVELKPFQDYQKLSSNLGGPGSSRTPPTGRSFSGLNS 2088
Score = 30.0 bits (66), Expect = 4.8
Identities = 26/91 (28%), Positives = 35/91 (38%), Gaps = 27/91 (29%)
Query: 375 RRAQLPKYQRNLPRPGQAPIGNPPVGPIGGMMPPQPGIPQQQGMRPPMPPHGQYGGHHQG 434
++ P + P+ A PP G PP P +PP+PP H+G
Sbjct: 376 KKGNSPNSEPPTPKTAWAETSRPPETEPG---PPAP--------KPPLPPP------HRG 418
Query: 435 MPGYLPGAMPPYGQGPPMVPPYQGGPP-RPP 464
G GPP P +GGPP +PP
Sbjct: 419 PAG---------NWGPPGDYPDRGGPPCKPP 440
>gi|21327715 transcription elongation regulator 1 isoform 1 [Homo
sapiens]
Length = 1098
Score = 76.3 bits (186), Expect = 6e-14
Identities = 107/420 (25%), Positives = 149/420 (35%), Gaps = 95/420 (22%)
Query: 120 DSAASTSFQPQPVQPQQGYIPPMAQPGLPPVPGAPGMPPGIPP-----LMPGVPPLMP-- 172
D S F P ++ Q P PP G PP + P +M G PP
Sbjct: 7 DGGESERFNPGELRMAQQQALRFRGPAPPPNAVMRGPPPLMRPPPPFGMMRGPPPPPRPP 66
Query: 173 -GMPPVMPGMPPGMMPMGGMMPP-GP---GIPPLMPGMPPGMPPP---VPRPGIPPMTQA 224
G PP P MPP M P GG+ PP GP PP MP MPPP + PG+PP+T
Sbjct: 67 FGRPPFDPNMPP-MPPPGGIPPPMGPPHLQRPPFMPPPMSSMPPPPGMMFPPGMPPVTAP 125
Query: 225 QAVSAP-----GILNRPP--------APTATVPAPQPPVTK--------PLFPSAGQMGT 263
+ P + N+ P A T +P K P+ + Q+
Sbjct: 126 GTPALPPTEEIWVENKTPDGKVYYYNARTRESAWTKPDGVKVIQQSELTPMLAAQAQVQA 185
Query: 264 PVTSSSTASSNSES-------------------------LSASSKALFPSTAQAQAAVQG 298
+ + A + +++ A ++A + AQAQA VQ
Sbjct: 186 QAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQVQA 245
Query: 299 PVGTDFKPL---NSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLT 355
V + STP TT P P T S+ +++T+ +T A A S P T
Sbjct: 246 QVQAQVQAQAVGASTP--TTSSPAPAVSTSTSSSTPSSTTSTTTTATSVAQTVSTPTTQD 303
Query: 356 TT--------------SATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNPPV-- 399
T S + P + + + P ++P+P A PPV
Sbjct: 304 QTPSSAVSVATPTVSVSTPAPTATPVQTVPQPHPQTLPPAVPHSVPQPTTAIPAFPPVMV 363
Query: 400 ----GPIGGMMPPQPGIPQQQGMRPPMPPHGQYGGHHQGMPGYLPGAMPPYGQGPPMVPP 455
P+ GM P PG+ Q + P G LPG PP PM+ P
Sbjct: 364 PPFRVPLPGMPIPLPGVAMMQIVSCPYVKTVA-----TTKTGVLPGMAPPI---VPMIHP 415
Score = 53.9 bits (128), Expect = 3e-07
Identities = 53/244 (21%), Positives = 87/244 (35%), Gaps = 47/244 (19%)
Query: 149 PVPGAPGMPPGIPPLMPGVPPLMPGMPPVMPGMPPGMMPMGGMMPPGPGIPPLMPGMPPG 208
P P +PP +P +P +P PPVM +PP +P+ GM
Sbjct: 333 PQPHPQTLPPAVPHSVPQPTTAIPAFPPVM--VPPFRVPLPGM----------------- 373
Query: 209 MPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTATVPAPQPPVTKPLFPSAGQMGTPVT-- 266
P+P PG+ M Q VS P + T +P PP+ + P +P T
Sbjct: 374 ---PIPLPGVAMM---QIVSCPYVKTVATTKTGVLPGMAPPIVPMIHPQVAIAASPATLA 427
Query: 267 SSSTASSNSESLSASSKALFPSTAQAQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAYT 326
++ S +E +A K + + ++ + P + K EP K +
Sbjct: 428 GATAVSEWTEYKTADGKTYYYNNRTLESTWEKP--QELKEKEKLEEKIKEPIKEP----S 481
Query: 327 QSTASTTSTTNSTAAKPAASITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNL 386
+ + +P I +P +E+++ EE+ AQ K
Sbjct: 482 EEPLPMETEEEDPKEEPIKEIKEEP--------------KEEEMTEEEKAAQKAKPVATA 527
Query: 387 PRPG 390
P PG
Sbjct: 528 PIPG 531
>gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]
Length = 2217
Score = 75.5 bits (184), Expect = 1e-13
Identities = 107/378 (28%), Positives = 133/378 (35%), Gaps = 88/378 (23%)
Query: 129 PQPVQPQQGYIPPMAQPGLP--PVPGAPGMPPGIPPLMPGVPPLM---PGMPPVMPGMPP 183
PQ + Y P A PGLP VP AP PP + P P M P +PP MP
Sbjct: 663 PQSLPSLGAYQQPTAAPGLPVGSVP-APACPPSLQQHFPD--PAMSFAPVLPPPSTPMPT 719
Query: 184 GMMPMGGMMPPGPGIPPLMPGMP--------PGMP-PPVPRPGIPP-MTQAQAVSAPGIL 233
G G PPG PPL P P +P PVP P +PP + A V AP L
Sbjct: 720 GP---GQPAPPGQQPPPLAQPTPLPQVLAPQPVVPLQPVP-PHLPPYLAPASQVGAPAQL 775
Query: 234 N------RPPAPTATVPAPQPP--VTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKAL 285
P P A VP PP V P+ P AG G P
Sbjct: 776 KPLQMPQAPLQPLAQVPPQMPPIPVVPPITPLAGIDGLP--------------------- 814
Query: 286 FPSTAQAQAAVQGPVGTD--FKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKP 343
P+ A PV F P P+ P P PA + A P
Sbjct: 815 -PALPDLPTATVPPVPPPQYFSPAVILPSLAAPLP-PASPALPLQAVKLPHPPGAPLAMP 872
Query: 344 AASIT-SKPATLTTTSATSKLIHPDEDISLEERRAQLPK---YQRNLPRPGQAPIGNPPV 399
+I + PAT+ + + +S+ AQLP Y P+ + P
Sbjct: 873 CRTIVPNAPATIPLLAVAPPGVAA---LSIHSAVAQLPGQPVYPAAFPQMAPTDVPPSPH 929
Query: 400 GPIGGMM--PPQPGIPQQQGMRPPMPPHGQYGGHHQGMPGYLPGAMPPYGQGPP--MVPP 455
+ M PPQP +P Q + PP P +PP PP ++PP
Sbjct: 930 HTVQNMRATPPQPALPPQPTL-PPQP------------------VLPPQPTLPPQPVLPP 970
Query: 456 YQGGPPR---PPMGMRPP 470
PP+ PP M PP
Sbjct: 971 QPTRPPQPVLPPQPMLPP 988
Score = 73.2 bits (178), Expect = 5e-13
Identities = 94/378 (24%), Positives = 127/378 (33%), Gaps = 77/378 (20%)
Query: 136 QGYIPPMAQPGLPPVP---GAPGMPPGIPPLMPGVPPLMPGMPPVMPGMPPGMMPMGGMM 192
+G + P + P L APG+P G P P L P P + P M
Sbjct: 658 EGPVLPQSLPSLGAYQQPTAAPGLPVGSVPAPACPPSLQQHFPDPAMSFAPVLPPPSTPM 717
Query: 193 PPGPGIPPLMPGMPPGMPPPVPRPGI-----------------PPMTQAQAVSAPGIL-- 233
P GPG P PP + P P P + P + A V AP L
Sbjct: 718 PTGPGQPAPPGQQPPPLAQPTPLPQVLAPQPVVPLQPVPPHLPPYLAPASQVGAPAQLKP 777
Query: 234 ----NRPPAPTATVPAPQP--PVTKPLFPSAGQMGTPVTSSSTASSN------------- 274
P P A VP P PV P+ P AG G P ++
Sbjct: 778 LQMPQAPLQPLAQVPPQMPPIPVVPPITPLAGIDGLPPALPDLPTATVPPVPPPQYFSPA 837
Query: 275 --SESLSASSKALFPSTAQAQAAVQGPVGTDFKPLNSTPATTTEPPKP-TFPAYTQSTAS 331
SL+A P+ + P G PL + P T P P T P +
Sbjct: 838 VILPSLAAPLPPASPALPLQAVKLPHPPGA---PL-AMPCRTIVPNAPATIPLLAVAPPG 893
Query: 332 TTSTTNSTAAKPAASITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQ 391
+ + +A PA + T + P +++ RA P+ P Q
Sbjct: 894 VAALSIHSAVAQLPGQPVYPAAFPQMAPTD--VPPSPHHTVQNMRATPPQ----PALPPQ 947
Query: 392 APIGNPPVGPIGGMMPPQPGIPQQQGMRPPMPPHGQYGGHHQGMPGYLPGAMPPYGQGPP 451
+ PV P +PPQP +P Q RPP P +PP P
Sbjct: 948 PTLPPQPVLPPQPTLPPQPVLPPQP-TRPPQP------------------VLPP----QP 984
Query: 452 MVPPYQGGPPRPPMGMRP 469
M+PP PP+P + +RP
Sbjct: 985 MLPPQPVLPPQPALPVRP 1002
Score = 69.3 bits (168), Expect = 7e-12
Identities = 56/179 (31%), Positives = 78/179 (43%), Gaps = 20/179 (11%)
Query: 123 ASTSFQPQPVQPQQGYIPPMAQPGLPPVPGAPGMPPGIPPLMPGVPPLMPGMPPVMPGMP 182
A T P P Q QP LPP P P P + P P +PP P +PP P
Sbjct: 920 APTDVPPSPHHTVQNMRATPPQPALPPQPTLPPQP--VLPPQPTLPP-QPVLPPQPTRPP 976
Query: 183 PGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTA- 241
++P M+PP P +PP P +P + P +P +P A IL PAP A
Sbjct: 977 QPVLPPQPMLPPQPVLPP-QPALP--VRPEPLQPHLPEQAAPAATPGSQILLGHPAPYAV 1033
Query: 242 -------TVPAP-----QPPVTKPLFPSAGQMGTPVTSS-STASSNSESLSASSKALFP 287
TVP P PP+ + L P+A ++ SS +T S++ +S+ + L P
Sbjct: 1034 DVAAQVPTVPVPPAAVLSPPLPEVLLPAAPELLPQFPSSLATVSASVQSVPTQTATLLP 1092
Score = 62.0 bits (149), Expect = 1e-09
Identities = 110/471 (23%), Positives = 143/471 (30%), Gaps = 106/471 (22%)
Query: 85 IPEKDMDERRRLLEQKTQESQKKKQQDDSDEYDDDDSAASTSFQPQPVQPQQGYIPPMAQ 144
I K + +R L++ + + Q + + D A P P+Q Q Y Q
Sbjct: 527 IVAKSIRDRVALIQWRRERIWPALQPKEQQDVGSPDKARGP---PVPLQVQVTYHAQAGQ 583
Query: 145 PGLPPVPGAPG-----MPPGI--------------------------------------- 160
PG PP P P +PP +
Sbjct: 584 PG-PPEPEEPEADQHLLPPTLPTSATSLASDSTFDSGQGSTVYSDSQSSQQSVMLGSLAD 642
Query: 161 -----------PPLMPG--VPPLMPGM-----PPVMPGMPPGMMPMGGMMPP-------- 194
PP+ G +P +P + P PG+P G +P P
Sbjct: 643 AAPSPAQCVCSPPVSEGPVLPQSLPSLGAYQQPTAAPGLPVGSVPAPACPPSLQQHFPDP 702
Query: 195 ----GPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTATVP-APQPP 249
P +PP MP G P P PG P AQ P +L AP VP P PP
Sbjct: 703 AMSFAPVLPPPSTPMPTGPGQPAP-PGQQPPPLAQPTPLPQVL----APQPVVPLQPVPP 757
Query: 250 VTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPVGTDFKPLNS 309
P A Q+G P L P AQ Q P P+
Sbjct: 758 HLPPYLAPASQVGAPA-----------QLKPLQMPQAPLQPLAQVPPQMPPIPVVPPITP 806
Query: 310 TPATTTEPPK-PTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSATSKLIHPDE 368
PP P P T + P+ + PA+ KL HP
Sbjct: 807 LAGIDGLPPALPDLPTATVPPVPPPQYFSPAVILPSLAAPLPPASPALPLQAVKLPHPPG 866
Query: 369 DISLEERRAQLPKYQRNLPRPGQAPIGNPPVGPIGGMMPPQPGIPQQQGMRPPMPPHGQY 428
R +P +P AP G + I + PG P P M P
Sbjct: 867 APLAMPCRTIVPNAPATIPLLAVAPPGVAALS-IHSAVAQLPGQPVYPAAFPQMAPTDVP 925
Query: 429 GGHH---QGMPGYLP-GAMPPYGQGP--PMVPPYQGGPPR---PPMGMRPP 470
H Q M P A+PP P P++PP PP+ PP RPP
Sbjct: 926 PSPHHTVQNMRATPPQPALPPQPTLPPQPVLPPQPTLPPQPVLPPQPTRPP 976
Score = 60.1 bits (144), Expect = 4e-09
Identities = 76/282 (26%), Positives = 104/282 (36%), Gaps = 41/282 (14%)
Query: 216 PGIPPMTQAQAVSAPGILNRPPAP-----TATVPAPQPPVTKPLFPSAGQMGTPVT---S 267
P + P Q Q V +P PP P T A QP +P P A Q P T S
Sbjct: 548 PALQPKEQ-QDVGSPDKARGPPVPLQVQVTYHAQAGQPGPPEPEEPEADQHLLPPTLPTS 606
Query: 268 SSTASSNSESLSASSKALFPSTAQAQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQ 327
+++ +S+S S ++ + +Q +V D P S PP P Q
Sbjct: 607 ATSLASDSTFDSGQGSTVYSDSQSSQQSVMLGSLADAAP--SPAQCVCSPPVSEGPVLPQ 664
Query: 328 STASTTSTTNSTAAKPAASITSKPATLTTTSATSKLIHPDEDIS--LEERRAQLPKYQRN 385
S S + TAA P + S PA S P + L +P
Sbjct: 665 SLPSLGAYQQPTAA-PGLPVGSVPAPACPPSLQQHFPDPAMSFAPVLPPPSTPMPTGPGQ 723
Query: 386 LPRPGQAPIGNPPVG---PIGGMMPPQPGIPQQQGMRPPMPPH--------GQYGGHHQG 434
PGQ P PP+ P+ ++ PQP +P Q P+PPH Q G Q
Sbjct: 724 PAPPGQQP---PPLAQPTPLPQVLAPQPVVPLQ-----PVPPHLPPYLAPASQVGAPAQL 775
Query: 435 MPGYLPGAMPPYGQGPPMVPPYQGGPPRPPMGMRPPVMSQGG 476
P +P A P+ P Q P PP+ + PP+ G
Sbjct: 776 KPLQMPQA--------PLQPLAQVPPQMPPIPVVPPITPLAG 809
Score = 52.4 bits (124), Expect = 9e-07
Identities = 62/237 (26%), Positives = 85/237 (35%), Gaps = 49/237 (20%)
Query: 141 PMAQPGLPPVPGAPGMPPGIPPLMPGVPPL--------MPGMPPVMPGMPPGMMPMG--- 189
P+A P VP AP P + PGV L +PG P V P P M P
Sbjct: 868 PLAMPCRTIVPNAPATIPLLAVAPPGVAALSIHSAVAQLPGQP-VYPAAFPQMAPTDVPP 926
Query: 190 ---------GMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPM----TQAQAVSAPGILNRP 236
PP P +PP P +PP P P+P +PP Q P + +P
Sbjct: 927 SPHHTVQNMRATPPQPALPP-QPTLPP-QPVLPPQPTLPPQPVLPPQPTRPPQPVLPPQP 984
Query: 237 PAPTATVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKALFPSTAQAQAAV 296
P V PQP + P+ P Q P ++ A+ S+ L P+ A
Sbjct: 985 MLPPQPVLPPQPAL--PVRPEPLQPHLPEQAAPAATPGSQILLG-----HPAPYAVDVAA 1037
Query: 297 QGPVGTDFKPLNSTPATTTEPPKP---------TFPAYTQSTASTTSTTNSTAAKPA 344
Q P + PA PP P P + S A+ +++ S + A
Sbjct: 1038 QVPT------VPVPPAAVLSPPLPEVLLPAAPELLPQFPSSLATVSASVQSVPTQTA 1088
Score = 45.8 bits (107), Expect = 8e-05
Identities = 70/288 (24%), Positives = 95/288 (32%), Gaps = 56/288 (19%)
Query: 112 DSDEYDDDDSAASTSFQPQPVQPQQ--GYIPPMAQPGLPPVPGAPGMPPGIPPLMPGVPP 169
DS Y D S+ QP + QQ P PG PP P AP PP G P
Sbjct: 1345 DSAPYKDQ---LSSKEQPSFLASQQLLSQAGPSNPPGAPPAPLAPSSPPVTALPQDGAAP 1401
Query: 170 LMPGMPPVM---------PGMPPGM-------MPMGGMMPPGPGIPPLMPGMPPGMPPPV 213
MP PG P G+ P+ + PL+ G+ P P
Sbjct: 1402 ATSTMPEPASGTASQAGGPGTPQGLTSELETSQPLAETHEAPLAVQPLVVGLAPCTP--- 1458
Query: 214 PRPGIPPMTQAQAVSAPGILNRPPAPTATVPAPQPPVTKPLFPSAGQMGTPVTSSSTASS 273
P + SAP R P P PAP+P P +G T
Sbjct: 1459 ----APEAASTRDASAP----REPLPP---PAPEPS------PHSG------TPQPALGQ 1495
Query: 274 NSESLSASSKALFPSTAQAQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQSTASTT 333
+ L A+ A+ +T+Q + GP P PP+ F
Sbjct: 1496 PAPLLPAAVGAVSLATSQLPSPPLGPTVPPQPPSALESDGEGPPPRVGF---------VD 1546
Query: 334 STTNSTAAKPAASITSKPATLTTTSATSKLIHPDEDISLEERRAQLPK 381
ST S K + + ++ SA + + D D +LE R P+
Sbjct: 1547 STIKSLDEKLRTLLYQEHVPTSSASAGTPVEVGDRDFTLEPLRGDQPR 1594
Score = 45.4 bits (106), Expect = 1e-04
Identities = 56/234 (23%), Positives = 83/234 (35%), Gaps = 32/234 (13%)
Query: 239 PTATVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKALFPSTAQ--AQAAV 296
P A PAP+ P + P P + P +S ++ + LS+ + F ++ Q +QA
Sbjct: 1317 PVAEHPAPEAPESSPPLPLSS---LPPEASQDSAPYKDQLSSKEQPSFLASQQLLSQAGP 1373
Query: 297 QGPVGTDFKPL--NSTPATT-----TEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITS 349
P G PL +S P T P T P TAS + + TS
Sbjct: 1374 SNPPGAPPAPLAPSSPPVTALPQDGAAPATSTMPEPASGTASQAGGPGTPQGLTSELETS 1433
Query: 350 KPATLTTTSATSKLIHP---------DEDISLEERRAQLPKYQRNLPRPGQAP---IGNP 397
+P L T + P + R A P+ P P +P P
Sbjct: 1434 QP--LAETHEAPLAVQPLVVGLAPCTPAPEAASTRDASAPREPLPPPAPEPSPHSGTPQP 1491
Query: 398 PVGPIGGMMPPQPGIPQQQGMRPPMPPHGQYGGHHQGMPGYLPGAMPPYGQGPP 451
+G ++P G + P PP G +P P A+ G+GPP
Sbjct: 1492 ALGQPAPLLPAAVGAVSLATSQLPSPPLG------PTVPPQPPSALESDGEGPP 1539
Score = 43.5 bits (101), Expect = 4e-04
Identities = 47/187 (25%), Positives = 69/187 (36%), Gaps = 21/187 (11%)
Query: 129 PQPVQPQQGYIPPMAQPGLPPVPGAPGMPPGIPPLMP--GVPPLMPGMPPVMPGMPPGMM 186
PQP+ P Q P LPP P P P + P +P P PG ++ P +
Sbjct: 982 PQPMLPPQ--------PVLPPQPALPVRPEPLQPHLPEQAAPAATPGSQILLGHPAPYAV 1033
Query: 187 PMGGMMPPGPGIPP---LMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTATV 243
+ +P P +PP L P +P + P P + P + + + P TAT+
Sbjct: 1034 DVAAQVPTVP-VPPAAVLSPPLPEVLLPAAPE--LLPQFPSSLATVSASVQSVPTQTATL 1090
Query: 244 PAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPVGTD 303
PP PL G T T E ++ K P Q+ + G T
Sbjct: 1091 ---LPPANPPLPGGPGIASPCPTVQLTVEPVQEEQASQDKP--PGLPQSCESYGGSDVTS 1145
Query: 304 FKPLNST 310
K L+ +
Sbjct: 1146 GKELSDS 1152
Score = 29.3 bits (64), Expect = 8.2
Identities = 22/69 (31%), Positives = 25/69 (36%), Gaps = 10/69 (14%)
Query: 185 MMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTATVP 244
M G PG P GMP P PG P++ A APT +VP
Sbjct: 2158 MEAQAGWAAPGEARAMTAPRAGVGMPRLPPAPG--PLSTTVIPGA--------APTLSVP 2207
Query: 245 APQPPVTKP 253
P P KP
Sbjct: 2208 TPDPESEKP 2216
>gi|162329583 cleavage and polyadenylation specific factor 6, 68 kD
subunit [Homo sapiens]
Length = 551
Score = 75.1 bits (183), Expect = 1e-13
Identities = 67/197 (34%), Positives = 83/197 (42%), Gaps = 31/197 (15%)
Query: 129 PQPVQPQQGYIPPMAQPGL------PPV--PGAPGMPPGIPPLMPGVPPLMPGMPPVMPG 180
P P P Q PP+A P PPV PG P P + PL PG PP +PG P PG
Sbjct: 250 PGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPP-PG 308
Query: 181 MPP---GMMPMGGMMPP---GPGIPPL-------MPGMPPGMPPPVPRPG---IPPMTQA 224
PP G P G PP GP PPL +PG PPG PPP P PP T +
Sbjct: 309 PPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFPPPTNS 368
Query: 225 QAVSAPGILNRPPAPTATVPAPQPPVTKPLFPSAGQMG---TPVTSSSTASSNSESLSAS 281
P +R P PT P P P +M TP++ + + + + S
Sbjct: 369 ---GMPTSDSRGPPPTDPYGRPPPYDRGDYGPPGREMDTARTPLSEAEFEEIMNRNRAIS 425
Query: 282 SKALFPSTAQAQAAVQG 298
S A+ + + A A G
Sbjct: 426 SSAISRAVSDASAGDYG 442
Score = 72.4 bits (176), Expect = 8e-13
Identities = 56/158 (35%), Positives = 61/158 (38%), Gaps = 29/158 (18%)
Query: 140 PPMAQPGLPPVPGAPGMPPGIPPLMPGVPPLMPGMPPVMPGMPPGMM--PMGGMMPPGP- 196
P A PG PP P G P PPL P PP PG PP +PP + P G PP P
Sbjct: 218 PGPAGPGGPPPPFPAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPV 277
Query: 197 -------GIPPL---MPGMPPGMP-------PPVPRPGIPPMTQAQAVSAPGILNRP--- 236
G PPL PG PP +P PP P+ G PP PG L P
Sbjct: 278 LFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTL 337
Query: 237 ------PAPTATVPAPQPPVTKPLFPSAGQMGTPVTSS 268
P P P P P V FP G P + S
Sbjct: 338 APPPHLPGPPPGAPPPAPHVNPAFFPPPTNSGMPTSDS 375
Score = 53.1 bits (126), Expect = 5e-07
Identities = 42/101 (41%), Positives = 48/101 (47%), Gaps = 18/101 (17%)
Query: 387 PRPGQAPIGNP-PVGPI--GGMMPPQPGIPQQQGMRPPMP------PHGQ--YGGHHQGM 435
PRP P G P P GP G ++PP P +G RPP P P GQ G G
Sbjct: 237 PRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGP 296
Query: 436 PGYLPGAMPPYG-----QGPPMVPPYQGGPPRPPMGMRPPV 471
P +PG PP G QGPP PP PPRPP + PP+
Sbjct: 297 PPPVPGYGPPPGPPPPQQGPP--PPPGPFPPRPPGPLGPPL 335
Score = 47.0 bits (110), Expect = 4e-05
Identities = 36/87 (41%), Positives = 39/87 (44%), Gaps = 18/87 (20%)
Query: 389 PGQAPIGNPPVGPIG-GMMPPQPGIPQQQGMRPPMPPHGQYGGHHQGMPGYLPGAMPPYG 447
PGQ P G PP+GP+ G PP PG PP PP Q G P PG PP
Sbjct: 280 PGQ-PFGQPPLGPLPPGPPPPVPGYGP-----PPGPPPPQQG------PPPPPGPFPPRP 327
Query: 448 QGPPMVPPYQGGP----PRPPMGMRPP 470
G P+ PP P P PP G PP
Sbjct: 328 PG-PLGPPLTLAPPPHLPGPPPGAPPP 353
Score = 45.1 bits (105), Expect = 1e-04
Identities = 38/101 (37%), Positives = 45/101 (44%), Gaps = 6/101 (5%)
Query: 376 RAQLPKYQRNLPR-PGQAPIGNPPVGPIGGMMPPQPGIPQQQGMRPPMPPHGQYGGHHQG 434
RA P+ R R PG P G+ GP G PP P Q RPP+ P G G
Sbjct: 194 RAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPPPPFPAGQTPPRPPLGPPGPPGPPGPP 253
Query: 435 MPGYL---PGAMPP-YGQGPPMVPPYQGGP-PRPPMGMRPP 470
PG + P A PP G PP + G P +PP+G PP
Sbjct: 254 PPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPP 294
Score = 42.7 bits (99), Expect = 7e-04
Identities = 35/100 (35%), Positives = 37/100 (37%), Gaps = 25/100 (25%)
Query: 387 PRPGQAPIGNPPVGPIGGMMPPQPGIPQQQGMRPPMPPHGQYG-----GHHQGMPGYLPG 441
P PG P PP PPQ G P G PP PP G G +PG PG
Sbjct: 299 PVPGYGPPPGPP--------PPQQGPPPPPGPFPPRPP-GPLGPPLTLAPPPHLPGPPPG 349
Query: 442 AMPPYGQ-GPPMVPP----------YQGGPPRPPMGMRPP 470
A PP P PP +G PP P G PP
Sbjct: 350 APPPAPHVNPAFFPPPTNSGMPTSDSRGPPPTDPYGRPPP 389
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 75.1 bits (183), Expect = 1e-13
Identities = 100/376 (26%), Positives = 132/376 (35%), Gaps = 58/376 (15%)
Query: 117 DDDDSAASTSFQPQPVQPQQG-----YIPPMAQPGLPPVPGAPGMPPGIPPLMPGVPPLM 171
D + S T+ + + VQ +QG PP+ Q P+P G PG PL
Sbjct: 181 DSEASQEETTKKQKVVQKEQGKPEGIIKPPLQQQPPKPIPKQQG--PGRDPLQ------Q 232
Query: 172 PGMPPVMPGMPPGMMPMGGMMPPGPGIPPLMPGMPPGMPP---PVPRPGIPPMTQAQAVS 228
G P + P + PPG G P P P P+ R P T+ QA
Sbjct: 233 DGTPKSISSQQPEKIKS---QPPGTGKPIQGPTQTPQTDHAKLPLQRDASRPQTK-QADI 288
Query: 229 APGILNRPPAPTATVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKALFPS 288
G +P P+ + P Q P P P A Q G + A A L
Sbjct: 289 VRGESVKPSLPSPSKPPIQQPT--PGKPPAQQPGHEKSQPGPAKP-----PAQPSGLTKP 341
Query: 289 TAQAQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASIT 348
AQ V+ PV P TT P +P PA + A T + ++ +P
Sbjct: 342 LAQQPGTVKPPV--------QPPGTTKPPAQPLGPA--KPPAQQTGSEKPSSEQPGPKAL 391
Query: 349 SKPATLTTTSATSK--LIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNPPVGPIGGMM 406
++P + T A P + + + AQ P Q PG P P P G +
Sbjct: 392 AQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPG--PTKTPVQQPGPGKI 449
Query: 407 PPQ---PGIPQQQGMRPPMPPHGQYGGHHQGMPGYLPGAMPPYGQGPPMVPPYQGGPPRP 463
P Q PG Q P PP +PG P PP GP PP Q G +P
Sbjct: 450 PAQQAGPGKTSAQQTGPTKPP--------SQLPG--PAKPPPQQPGPAKPPPQQPGSAKP 499
Query: 464 PM----GMRPPVMSQG 475
P +PP G
Sbjct: 500 PSQQPGSTKPPPQQPG 515
Score = 60.1 bits (144), Expect = 4e-09
Identities = 79/314 (25%), Positives = 105/314 (33%), Gaps = 34/314 (10%)
Query: 133 QPQQGYIPPMAQPGLPPVPGAPGMPPGIPPL-MPGV---PPLMPGM---PPVMPGM--PP 183
QP G IP AQ P A P PP +PG PP PG PP PG PP
Sbjct: 443 QPGPGKIP--AQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPP 500
Query: 184 GMMPMGGMMPPG-PGIPPLMPGMPPGMPPPVPRPG-IPPMTQAQAVSAPGILN--RPPAP 239
P PP PG P P PP +PG P Q + + P +P +
Sbjct: 501 SQQPGSTKPPPQQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQSTKPVSQ 560
Query: 240 TATVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGP 299
T + QPP P G P T ++ L KA F + + Q V
Sbjct: 561 TGSGKPLQPPTVSPSAKQPPSQGLPKTICPLCNTTELLLHVPEKANFNTCTECQTTVCSL 620
Query: 300 VGTDFKP----------LNSTPATTTE---PPKPTFPAYTQSTASTTSTTNSTAAKPAAS 346
G + P LN P P+ P TA T+T+ + + P
Sbjct: 621 CGFNPNPHLTEVKEWLCLNCQMKRALGGDLAPVPSSPQPKLKTAPVTTTSAVSKSSPQPQ 680
Query: 347 ITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNPPVGPIGGMM 406
TS SK P + L ++ +P +A + P
Sbjct: 681 QTSPKKDAAPKQDLSKAPEPKKPPPLVKQPTLHGSPSAKAKQPPEADSLSKPA------P 734
Query: 407 PPQPGIPQQQGMRP 420
P +P +P +Q P
Sbjct: 735 PKEPSVPSEQDKAP 748
Score = 56.2 bits (134), Expect = 6e-08
Identities = 95/408 (23%), Positives = 125/408 (30%), Gaps = 86/408 (21%)
Query: 97 LEQKTQESQKKKQQDDSDEYDDDDSAAS-TSFQPQPVQPQQ-GYIPPMAQPGLPPVPGAP 154
L+Q+ + K+Q D D + S +S QP+ ++ Q G P+ P P
Sbjct: 211 LQQQPPKPIPKQQGPGRDPLQQDGTPKSISSQQPEKIKSQPPGTGKPIQGPTQTPQTDHA 270
Query: 155 GMP------------------PGIPPLMPGVPPLMPGMPPVM---PGMPPGMMPMGGMMP 193
+P + P +P P PP+ PG PP P
Sbjct: 271 KLPLQRDASRPQTKQADIVRGESVKPSLPS-----PSKPPIQQPTPGKPPAQQPGHEKSQ 325
Query: 194 PGPGIPPLMPG-----------------MPPGMPPPVPRPGIPPMTQAQAVSAPGILNRP 236
PGP PP P PPG P +P P AQ + +
Sbjct: 326 PGPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQ 385
Query: 237 PAPTA--------TVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKALFPS 288
P P A PA QP P P Q+GTP + L + +KA P+
Sbjct: 386 PGPKALAQPPGVGKTPAQQP---GPAKPPTQQVGTP-----KPLAQQPGLQSPAKAPGPT 437
Query: 289 TAQAQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASI- 347
Q G + T A T P KP P+ A A P
Sbjct: 438 KTPVQQPGPGKIPAQQAGPGKTSAQQTGPTKP--PSQLPGPAKPPPQQPGPAKPPPQQPG 495
Query: 348 TSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNPPVGPIGGMMP 407
++KP P + + Q P + P P Q PP G P
Sbjct: 496 SAKP--------------PSQQPGSTKPPPQQPGPAK--PSPQQPGSTKPPSQQPGSAKP 539
Query: 408 ----PQPGIPQQQGMRPPMPPHGQYGGHHQGMPGYLPGAMPPYGQGPP 451
P P P Q P+ G G P P A P QG P
Sbjct: 540 SAQQPSPAKPSAQQSTKPVSQTG--SGKPLQPPTVSPSAKQPPSQGLP 585
Score = 49.7 bits (117), Expect = 6e-06
Identities = 57/243 (23%), Positives = 92/243 (37%), Gaps = 21/243 (8%)
Query: 122 AASTSFQPQPVQPQQGY----IPPMAQPGLPPVPGAPGMPPGIPPLMPGVPPLMPGMPPV 177
+ S S P +P+ + + AQP PP P P PP PP P +PP P +
Sbjct: 2378 SGSPSVSSLPAKPRPFFRSSSLDISAQPPPPPPPPPPPPPPPPPPPPPPLPPPTSPKPTI 2437
Query: 178 MPGMPPGM-MPMGGMMPPGPGIPPL-------MPGMPPGMPPPVPRPGIPPMTQAQAVSA 229
+P + P+ P + L G+P P +PP + ++ +
Sbjct: 2438 LPKKKLTVASPVTTATPLFDAVTTLETTAVLRSNGLPVTRICTTAPPPVPP--KPSSIPS 2495
Query: 230 PGILNRPPAPTATVPAPQPPVTKPLFPSAGQMGTPV----TSSSTASSNSESLSASSKAL 285
+ P P+ AP+P + P P+ Q T + T S SS + +L S+
Sbjct: 2496 GLVFTHRPEPSKPPIAPKPVI--PQLPTTTQKPTDIHPKPTGLSLTSSMTLNLVTSADYK 2553
Query: 286 FPSTAQAQAAVQGPVGTDF-KPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPA 344
PS + F K L T T P +P P + ++ + TS + +K
Sbjct: 2554 LPSPTSPLSPHSNKSSPRFSKSLTETYVVITLPSEPGTPTDSSASQAITSWPLGSPSKDL 2613
Query: 345 ASI 347
S+
Sbjct: 2614 VSV 2616
Score = 48.5 bits (114), Expect = 1e-05
Identities = 81/331 (24%), Positives = 117/331 (35%), Gaps = 52/331 (15%)
Query: 180 GMPPGMMPMGGMMPPG----PGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAV----SAPG 231
G+P G +P P + P G PP RP P +++++ S
Sbjct: 65 GLPKGSVPPAAAESPSMHRKQELDSSHPPKQSGRPPDPGRPAQPGLSKSRTTDTFRSEQK 124
Query: 232 ILNRPPAPTATVPAPQPPVTKPLFPSAGQMG--TPVTSSSTASS-----NSESLSASSKA 284
+ R P+ + + K S+ G + V + S SS N L + S+A
Sbjct: 125 LPGRSPSTISLKESKSRTDLKEEHKSSMMPGFLSEVNALSAVSSVVNKFNPFDLISDSEA 184
Query: 285 LFPSTAQAQAAVQGPVGTDFKPLNST-PATTTEPPKPT--------FPAYTQSTASTTST 335
T + Q VQ G KP P +PPKP P T + S+
Sbjct: 185 SQEETTKKQKVVQKEQG---KPEGIIKPPLQQQPPKPIPKQQGPGRDPLQQDGTPKSISS 241
Query: 336 TNSTAAKPAASITSKPA---TLTTTSATSKLIHPDEDISLEERRAQLPKYQR---NLPRP 389
K T KP T T + +KL + + ++A + + + +LP P
Sbjct: 242 QQPEKIKSQPPGTGKPIQGPTQTPQTDHAKLPLQRDASRPQTKQADIVRGESVKPSLPSP 301
Query: 390 GQAPIGNPPVGPIGGMMPP--QPGIPQQQG--MRPPMPPHGQYGGHHQGMPGYLPGAMPP 445
+ PI P G PP QPG + Q +PP P G P A P
Sbjct: 302 SKPPIQQPTPGK-----PPAQQPGHEKSQPGPAKPPAQPSGLTK----------PLAQQP 346
Query: 446 YGQGPPMVPPYQGGPPRPPMGMRPPVMSQGG 476
PP+ PP PP P+G P Q G
Sbjct: 347 GTVKPPVQPPGTTKPPAQPLGPAKPPAQQTG 377
Score = 48.1 bits (113), Expect = 2e-05
Identities = 82/347 (23%), Positives = 116/347 (33%), Gaps = 98/347 (28%)
Query: 212 PVPRPGIPPMTQAQAVSAPGILNRPPAPTATVP------------APQPPVTKPLFPSAG 259
PVP P + A + + P P T P AP+P PL
Sbjct: 652 PVPSSPQPKLKTAPVTTTSAVSKSSPQPQQTSPKKDAAPKQDLSKAPEPKKPPPLVKQPT 711
Query: 260 QMGTPVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPVGTD-------FKP---LNS 309
G+P ++ + ++SLS + PS Q + PV D KP L S
Sbjct: 712 LHGSP-SAKAKQPPEADSLSKPAPPKEPSVPSEQD--KAPVADDKPKQPKMVKPTTDLVS 768
Query: 310 TPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITS--------KPATLTTTSATS 361
+ + TT+P P+ +Q+ TT + +AKP+ S + ++ S
Sbjct: 769 SSSATTKPDIPSSKVQSQAEEKTTPPLKTDSAKPSQSFPPTGEKVSPFDSKAIPRPASDS 828
Query: 362 KLI-HPDEDISLEERRAQLPKYQRNLPRPGQA-----------PIGNP-PVG--PIGGMM 406
K+I HP + ++ P ++ P+ Q P G+P P G P G
Sbjct: 829 KIISHPGPSSESKGQKQVDPVQKKEEPKKAQTKMSPKPDAKPMPKGSPTPPGPRPTAGQT 888
Query: 407 PPQP---GIPQQQGMR--------------PPMPPH------------------------ 425
P P PQ+Q R P P
Sbjct: 889 VPTPQQSPKPQEQSRRFSLNLGSITDAPKSQPTTPQETVTGKLFGFGASIFSQASNLIST 948
Query: 426 -GQYGGHHQGMPGYLPGAMPPYGQGP-PMVPPYQGGPPRPPMGMRPP 470
GQ G H Q PG P Q P P PP GPP+ G PP
Sbjct: 949 AGQPGPHSQSGPG------APMKQAPAPSQPPTSQGPPK-STGQAPP 988
Score = 46.6 bits (109), Expect = 5e-05
Identities = 66/259 (25%), Positives = 88/259 (33%), Gaps = 43/259 (16%)
Query: 225 QAVSAPGILNRPPAPTATVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKA 284
+ + P + +PP P +P Q P PL Q GTP S +S E + +
Sbjct: 204 EGIIKPPLQQQPPKP---IPKQQGPGRDPL----QQDGTP---KSISSQQPEKIKSQP-- 251
Query: 285 LFPSTAQAQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPA 344
P T + +QGP T T P ++ + KP+
Sbjct: 252 --PGTGKP---IQGPTQTP---------QTDHAKLPLQRDASRPQTKQADIVRGESVKPS 297
Query: 345 ASITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGN--PPVGPI 402
SKP T P + S + A+ P L +P G PPV P
Sbjct: 298 LPSPSKPPIQQPTPGKPPAQQPGHEKS-QPGPAKPPAQPSGLTKPLAQQPGTVKPPVQPP 356
Query: 403 GGMMPPQPGIPQQQGMRPPMPPHGQYGGHHQG--MPGYLPGAMPPYGQGPPMVPPYQGGP 460
G PP Q + P PP Q G PG A PP G P Q GP
Sbjct: 357 GTTKPPA------QPLGPAKPPAQQTGSEKPSSEQPGPKALAQPP---GVGKTPAQQPGP 407
Query: 461 PRPP---MGMRPPVMSQGG 476
+PP +G P+ Q G
Sbjct: 408 AKPPTQQVGTPKPLAQQPG 426
Score = 45.8 bits (107), Expect = 8e-05
Identities = 57/238 (23%), Positives = 86/238 (36%), Gaps = 38/238 (15%)
Query: 153 APGMPPGIPPL--MPGVP-PLMPGMPPVMPGMPPGMMPMGGMMPPGPGIPPLMPGMPPGM 209
A +P G P + +P P P + PP P PP P PP PP +
Sbjct: 2373 ASQLPSGSPSVSSLPAKPRPFFRSSSLDISAQPPPPPPPPPPPPPPPPPPP-----PPPL 2427
Query: 210 PPPV-PRPGIPPMTQAQAVSAPGILNRPPAPTATVPAPQPPVTKPLFPSAGQMGTPVTSS 268
PPP P+P I P + S P TAT PLF + T + ++
Sbjct: 2428 PPPTSPKPTILPKKKLTVAS--------PVTTAT----------PLFDAV----TTLETT 2465
Query: 269 STASSNSESLSASSKALFPSTAQAQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQS 328
+ SN ++ P +++ + +P S P +P P P TQ
Sbjct: 2466 AVLRSNGLPVTRICTTAPPPVPPKPSSIPSGLVFTHRPEPSKPPIAPKPVIPQLPTTTQ- 2524
Query: 329 TASTTSTTNSTAAKPAASITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNL 386
T+ S+TS TSA KL P +S ++ P++ ++L
Sbjct: 2525 -----KPTDIHPKPTGLSLTSSMTLNLVTSADYKLPSPTSPLSPHSNKSS-PRFSKSL 2576
Score = 43.9 bits (102), Expect = 3e-04
Identities = 75/322 (23%), Positives = 117/322 (36%), Gaps = 59/322 (18%)
Query: 120 DSAASTSFQPQPVQPQQGYIPPMAQPGLPPVPGAPGMPPGIP--------------PLMP 165
D +A P P P PP P LPP P +P P +P PL
Sbjct: 2400 DISAQPPPPPPPPPPPPPPPPPPPPPPLPP-PTSP-KPTILPKKKLTVASPVTTATPLFD 2457
Query: 166 GVPPL-------MPGMP--PVMPGMPPGMMPMGGMMP--------PGPGIPPLMP-GMPP 207
V L G+P + PP + P +P P P PP+ P + P
Sbjct: 2458 AVTTLETTAVLRSNGLPVTRICTTAPPPVPPKPSSIPSGLVFTHRPEPSKPPIAPKPVIP 2517
Query: 208 GMPPPVPRP-GIPPMTQAQAVSAPGILNRPPAPTATVPAPQPPV------TKPLFPSA-- 258
+P +P I P ++++ LN + +P+P P+ + P F +
Sbjct: 2518 QLPTTTQKPTDIHPKPTGLSLTSSMTLNLVTSADYKLPSPTSPLSPHSNKSSPRFSKSLT 2577
Query: 259 ---------GQMGTPVTSSSTASSNSESLSASSKALFP-----STAQAQAAVQGPVGTDF 304
+ GTP SS++ + S L + SK L S AV+ P+ ++
Sbjct: 2578 ETYVVITLPSEPGTPTDSSASQAITSWPLGSPSKDLVSVEPVFSVVPPVTAVEIPISSEQ 2637
Query: 305 KPLNSTPATTTEPPKPTFPAYTQST-ASTTSTTNSTAAKPAASITSKPATLTTTSATSKL 363
S T T P+ Q+ S T + +K S T A S+ S
Sbjct: 2638 TFYISGALQTFSATPVTAPSSFQAAPTSVTQFLTTEVSKTEVSATRSTAPSVGLSSISIT 2697
Query: 364 IHPDEDISLEERRAQLPKYQRN 385
I P E ++L+ + P+Y+ +
Sbjct: 2698 I-PPEPLALDNIHLEKPQYKED 2718
Score = 43.1 bits (100), Expect = 6e-04
Identities = 55/237 (23%), Positives = 77/237 (32%), Gaps = 52/237 (21%)
Query: 128 QPQPVQPQQGYIPPMAQPGLPPVPGAPGMPPGIPPLMPGVPPLMPGMPPVMPGMPPGMMP 187
Q PVQ ++ P AQ + P P A MP G P PPG P
Sbjct: 845 QVDPVQKKEE--PKKAQTKMSPKPDAKPMPKGSP-------------------TPPGPRP 883
Query: 188 MGGMMPPGPGIPPLMPGM-------------PPGMPPPVPRP---------GIPPMTQAQ 225
G P P P P P P+ G +QA
Sbjct: 884 TAGQTVPTPQQSPKPQEQSRRFSLNLGSITDAPKSQPTTPQETVTGKLFGFGASIFSQAS 943
Query: 226 AV------SAPGILNRPPAPTATVPAP-QPPVTKPLFPSAGQMGTPVTSSSTASSNSESL 278
+ P + P AP PAP QPP ++ S GQ P + + E+
Sbjct: 944 NLISTAGQPGPHSQSGPGAPMKQAPAPSQPPTSQGPPKSTGQ--APPAPAKSIPVKKETK 1001
Query: 279 SASSKALFPSTAQAQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTST 335
+ +++ L P QA + P+ + + T EP K P + + ST
Sbjct: 1002 APAAEKLEPKAEQAPTVKRTETEKKPPPIKDSKSLTAEPQKAVLPTKLEKSPKPEST 1058
Score = 42.4 bits (98), Expect = 0.001
Identities = 78/339 (23%), Positives = 111/339 (32%), Gaps = 64/339 (18%)
Query: 121 SAASTSFQPQPVQPQQGYIPPMAQPGLPPVPGAPGMPPGIPPLMPGVPPLMPGMPPVMPG 180
+ + +S QPQ P++ P P P PPL+ P + G P
Sbjct: 671 AVSKSSPQPQQTSPKKDAAPKQDLSKAPE-------PKKPPPLVK--QPTLHGSPSAKAK 721
Query: 181 MPPGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQ--AQAVSAPGILNRPPA 238
PP + P P P +P P +P P M + VS+ +P
Sbjct: 722 QPP---EADSLSKPAPPKEPSVPSEQDKAPVADDKPKQPKMVKPTTDLVSSSSATTKPDI 778
Query: 239 PTATVPAPQPPVTKP-----------LFPSAGQMGTPVTSSSTASSNSESLSASSKALFP 287
P++ V + T P FP G+ +P S + S+S S P
Sbjct: 779 PSSKVQSQAEEKTTPPLKTDSAKPSQSFPPTGEKVSPFDSKAIPRPASDSKIISHPG--P 836
Query: 288 STAQAQAAVQGPVGTDFKPLNSTPATTTEP-----PK--PTFPAYTQSTASTTSTTNSTA 340
S+ PV +P + + +P PK PT P + TA T T +
Sbjct: 837 SSESKGQKQVDPVQKKEEPKKAQTKMSPKPDAKPMPKGSPTPPG-PRPTAGQTVPTPQQS 895
Query: 341 AKPA----------ASITSKPATLTTTSATSKLIHPDEDIS--LEERRAQLPKYQRNLPR 388
KP SIT P + TT P E ++ L A + NL
Sbjct: 896 PKPQEQSRRFSLNLGSITDAPKSQPTT--------PQETVTGKLFGFGASIFSQASNLIS 947
Query: 389 PGQAPIGNPPVGPIGGMMPPQPGIPQQQGMRPPMPPHGQ 427
P + GP G P +Q P PP Q
Sbjct: 948 TAGQPGPHSQSGP---------GAPMKQAPAPSQPPTSQ 977
Score = 40.8 bits (94), Expect = 0.003
Identities = 55/233 (23%), Positives = 78/233 (33%), Gaps = 18/233 (7%)
Query: 141 PMAQPGLPPVPGAP-----GMPPGIPPLMPGVPPLMPGMPPVMPGMPPGMMPMGGMMPPG 195
P P + +P P I P PP P PP P PP +P PP
Sbjct: 2377 PSGSPSVSSLPAKPRPFFRSSSLDISAQPPPPPPPPPPPPPPPPPPPPPPLP-----PPT 2431
Query: 196 PGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTATVPAPQPPVTKPLF 255
P ++P + PV P + +L P + PP P
Sbjct: 2432 SPKPTILPKKKLTVASPV-TTATPLFDAVTTLETTAVLRSNGLPVTRICTTAPPPVPPK- 2489
Query: 256 PSAGQMGTPVTSSSTASSNSESLSASSKALFPSTAQAQAAVQ-GPVG---TDFKPLNSTP 311
PS+ G T S + L P+T Q + P G T LN
Sbjct: 2490 PSSIPSGLVFTHRPEPSKPPIAPKPVIPQL-PTTTQKPTDIHPKPTGLSLTSSMTLNLVT 2548
Query: 312 ATTTEPPKPTFPAYTQSTASTTSTTNS-TAAKPAASITSKPATLTTTSATSKL 363
+ + P PT P S S+ + S T ++ S+P T T +SA+ +
Sbjct: 2549 SADYKLPSPTSPLSPHSNKSSPRFSKSLTETYVVITLPSEPGTPTDSSASQAI 2601
Score = 32.0 bits (71), Expect = 1.3
Identities = 20/62 (32%), Positives = 37/62 (59%), Gaps = 5/62 (8%)
Query: 60 ETIDAVPNAIPGRTDIELEIYGMEG----IPEKDMDERRRLLEQKTQESQKKKQQDDSDE 115
ETID+VP + +++ E+ G E +PE+D +++ LE++ E +K KQQ ++E
Sbjct: 3176 ETIDSVPT-LTTASEVFPEVVGDESALLIVPEEDKQQQQLDLERELLELEKIKQQRFAEE 3234
Query: 116 YD 117
+
Sbjct: 3235 LE 3236
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 75.1 bits (183), Expect = 1e-13
Identities = 100/376 (26%), Positives = 132/376 (35%), Gaps = 58/376 (15%)
Query: 117 DDDDSAASTSFQPQPVQPQQG-----YIPPMAQPGLPPVPGAPGMPPGIPPLMPGVPPLM 171
D + S T+ + + VQ +QG PP+ Q P+P G PG PL
Sbjct: 181 DSEASQEETTKKQKVVQKEQGKPEGIIKPPLQQQPPKPIPKQQG--PGRDPLQ------Q 232
Query: 172 PGMPPVMPGMPPGMMPMGGMMPPGPGIPPLMPGMPPGMPP---PVPRPGIPPMTQAQAVS 228
G P + P + PPG G P P P P+ R P T+ QA
Sbjct: 233 DGTPKSISSQQPEKIKS---QPPGTGKPIQGPTQTPQTDHAKLPLQRDASRPQTK-QADI 288
Query: 229 APGILNRPPAPTATVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKALFPS 288
G +P P+ + P Q P P P A Q G + A A L
Sbjct: 289 VRGESVKPSLPSPSKPPIQQPT--PGKPPAQQPGHEKSQPGPAKP-----PAQPSGLTKP 341
Query: 289 TAQAQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASIT 348
AQ V+ PV P TT P +P PA + A T + ++ +P
Sbjct: 342 LAQQPGTVKPPV--------QPPGTTKPPAQPLGPA--KPPAQQTGSEKPSSEQPGPKAL 391
Query: 349 SKPATLTTTSATSK--LIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNPPVGPIGGMM 406
++P + T A P + + + AQ P Q PG P P P G +
Sbjct: 392 AQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPG--PTKTPVQQPGPGKI 449
Query: 407 PPQ---PGIPQQQGMRPPMPPHGQYGGHHQGMPGYLPGAMPPYGQGPPMVPPYQGGPPRP 463
P Q PG Q P PP +PG P PP GP PP Q G +P
Sbjct: 450 PAQQAGPGKTSAQQTGPTKPP--------SQLPG--PAKPPPQQPGPAKPPPQQPGSAKP 499
Query: 464 PM----GMRPPVMSQG 475
P +PP G
Sbjct: 500 PSQQPGSTKPPPQQPG 515
Score = 60.1 bits (144), Expect = 4e-09
Identities = 79/314 (25%), Positives = 105/314 (33%), Gaps = 34/314 (10%)
Query: 133 QPQQGYIPPMAQPGLPPVPGAPGMPPGIPPL-MPGV---PPLMPGM---PPVMPGM--PP 183
QP G IP AQ P A P PP +PG PP PG PP PG PP
Sbjct: 443 QPGPGKIP--AQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPP 500
Query: 184 GMMPMGGMMPPG-PGIPPLMPGMPPGMPPPVPRPG-IPPMTQAQAVSAPGILN--RPPAP 239
P PP PG P P PP +PG P Q + + P +P +
Sbjct: 501 SQQPGSTKPPPQQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQSTKPVSQ 560
Query: 240 TATVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGP 299
T + QPP P G P T ++ L KA F + + Q V
Sbjct: 561 TGSGKPLQPPTVSPSAKQPPSQGLPKTICPLCNTTELLLHVPEKANFNTCTECQTTVCSL 620
Query: 300 VGTDFKP----------LNSTPATTTE---PPKPTFPAYTQSTASTTSTTNSTAAKPAAS 346
G + P LN P P+ P TA T+T+ + + P
Sbjct: 621 CGFNPNPHLTEVKEWLCLNCQMKRALGGDLAPVPSSPQPKLKTAPVTTTSAVSKSSPQPQ 680
Query: 347 ITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNPPVGPIGGMM 406
TS SK P + L ++ +P +A + P
Sbjct: 681 QTSPKKDAAPKQDLSKAPEPKKPPPLVKQPTLHGSPSAKAKQPPEADSLSKPA------P 734
Query: 407 PPQPGIPQQQGMRP 420
P +P +P +Q P
Sbjct: 735 PKEPSVPSEQDKAP 748
Score = 56.2 bits (134), Expect = 6e-08
Identities = 95/408 (23%), Positives = 125/408 (30%), Gaps = 86/408 (21%)
Query: 97 LEQKTQESQKKKQQDDSDEYDDDDSAAS-TSFQPQPVQPQQ-GYIPPMAQPGLPPVPGAP 154
L+Q+ + K+Q D D + S +S QP+ ++ Q G P+ P P
Sbjct: 211 LQQQPPKPIPKQQGPGRDPLQQDGTPKSISSQQPEKIKSQPPGTGKPIQGPTQTPQTDHA 270
Query: 155 GMP------------------PGIPPLMPGVPPLMPGMPPVM---PGMPPGMMPMGGMMP 193
+P + P +P P PP+ PG PP P
Sbjct: 271 KLPLQRDASRPQTKQADIVRGESVKPSLPS-----PSKPPIQQPTPGKPPAQQPGHEKSQ 325
Query: 194 PGPGIPPLMPG-----------------MPPGMPPPVPRPGIPPMTQAQAVSAPGILNRP 236
PGP PP P PPG P +P P AQ + +
Sbjct: 326 PGPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQ 385
Query: 237 PAPTA--------TVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKALFPS 288
P P A PA QP P P Q+GTP + L + +KA P+
Sbjct: 386 PGPKALAQPPGVGKTPAQQP---GPAKPPTQQVGTP-----KPLAQQPGLQSPAKAPGPT 437
Query: 289 TAQAQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASI- 347
Q G + T A T P KP P+ A A P
Sbjct: 438 KTPVQQPGPGKIPAQQAGPGKTSAQQTGPTKP--PSQLPGPAKPPPQQPGPAKPPPQQPG 495
Query: 348 TSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNPPVGPIGGMMP 407
++KP P + + Q P + P P Q PP G P
Sbjct: 496 SAKP--------------PSQQPGSTKPPPQQPGPAK--PSPQQPGSTKPPSQQPGSAKP 539
Query: 408 ----PQPGIPQQQGMRPPMPPHGQYGGHHQGMPGYLPGAMPPYGQGPP 451
P P P Q P+ G G P P A P QG P
Sbjct: 540 SAQQPSPAKPSAQQSTKPVSQTG--SGKPLQPPTVSPSAKQPPSQGLP 585
Score = 49.7 bits (117), Expect = 6e-06
Identities = 57/243 (23%), Positives = 92/243 (37%), Gaps = 21/243 (8%)
Query: 122 AASTSFQPQPVQPQQGY----IPPMAQPGLPPVPGAPGMPPGIPPLMPGVPPLMPGMPPV 177
+ S S P +P+ + + AQP PP P P PP PP P +PP P +
Sbjct: 2378 SGSPSVSSLPAKPRPFFRSSSLDISAQPPPPPPPPPPPPPPPPPPPPPPLPPPTSPKPTI 2437
Query: 178 MPGMPPGM-MPMGGMMPPGPGIPPL-------MPGMPPGMPPPVPRPGIPPMTQAQAVSA 229
+P + P+ P + L G+P P +PP + ++ +
Sbjct: 2438 LPKKKLTVASPVTTATPLFDAVTTLETTAVLRSNGLPVTRICTTAPPPVPP--KPSSIPS 2495
Query: 230 PGILNRPPAPTATVPAPQPPVTKPLFPSAGQMGTPV----TSSSTASSNSESLSASSKAL 285
+ P P+ AP+P + P P+ Q T + T S SS + +L S+
Sbjct: 2496 GLVFTHRPEPSKPPIAPKPVI--PQLPTTTQKPTDIHPKPTGLSLTSSMTLNLVTSADYK 2553
Query: 286 FPSTAQAQAAVQGPVGTDF-KPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPA 344
PS + F K L T T P +P P + ++ + TS + +K
Sbjct: 2554 LPSPTSPLSPHSNKSSPRFSKSLTETYVVITLPSEPGTPTDSSASQAITSWPLGSPSKDL 2613
Query: 345 ASI 347
S+
Sbjct: 2614 VSV 2616
Score = 48.5 bits (114), Expect = 1e-05
Identities = 81/331 (24%), Positives = 117/331 (35%), Gaps = 52/331 (15%)
Query: 180 GMPPGMMPMGGMMPPG----PGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAV----SAPG 231
G+P G +P P + P G PP RP P +++++ S
Sbjct: 65 GLPKGSVPPAAAESPSMHRKQELDSSHPPKQSGRPPDPGRPAQPGLSKSRTTDTFRSEQK 124
Query: 232 ILNRPPAPTATVPAPQPPVTKPLFPSAGQMG--TPVTSSSTASS-----NSESLSASSKA 284
+ R P+ + + K S+ G + V + S SS N L + S+A
Sbjct: 125 LPGRSPSTISLKESKSRTDLKEEHKSSMMPGFLSEVNALSAVSSVVNKFNPFDLISDSEA 184
Query: 285 LFPSTAQAQAAVQGPVGTDFKPLNST-PATTTEPPKPT--------FPAYTQSTASTTST 335
T + Q VQ G KP P +PPKP P T + S+
Sbjct: 185 SQEETTKKQKVVQKEQG---KPEGIIKPPLQQQPPKPIPKQQGPGRDPLQQDGTPKSISS 241
Query: 336 TNSTAAKPAASITSKPA---TLTTTSATSKLIHPDEDISLEERRAQLPKYQR---NLPRP 389
K T KP T T + +KL + + ++A + + + +LP P
Sbjct: 242 QQPEKIKSQPPGTGKPIQGPTQTPQTDHAKLPLQRDASRPQTKQADIVRGESVKPSLPSP 301
Query: 390 GQAPIGNPPVGPIGGMMPP--QPGIPQQQG--MRPPMPPHGQYGGHHQGMPGYLPGAMPP 445
+ PI P G PP QPG + Q +PP P G P A P
Sbjct: 302 SKPPIQQPTPGK-----PPAQQPGHEKSQPGPAKPPAQPSGLTK----------PLAQQP 346
Query: 446 YGQGPPMVPPYQGGPPRPPMGMRPPVMSQGG 476
PP+ PP PP P+G P Q G
Sbjct: 347 GTVKPPVQPPGTTKPPAQPLGPAKPPAQQTG 377
Score = 48.1 bits (113), Expect = 2e-05
Identities = 82/347 (23%), Positives = 116/347 (33%), Gaps = 98/347 (28%)
Query: 212 PVPRPGIPPMTQAQAVSAPGILNRPPAPTATVP------------APQPPVTKPLFPSAG 259
PVP P + A + + P P T P AP+P PL
Sbjct: 652 PVPSSPQPKLKTAPVTTTSAVSKSSPQPQQTSPKKDAAPKQDLSKAPEPKKPPPLVKQPT 711
Query: 260 QMGTPVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPVGTD-------FKP---LNS 309
G+P ++ + ++SLS + PS Q + PV D KP L S
Sbjct: 712 LHGSP-SAKAKQPPEADSLSKPAPPKEPSVPSEQD--KAPVADDKPKQPKMVKPTTDLVS 768
Query: 310 TPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITS--------KPATLTTTSATS 361
+ + TT+P P+ +Q+ TT + +AKP+ S + ++ S
Sbjct: 769 SSSATTKPDIPSSKVQSQAEEKTTPPLKTDSAKPSQSFPPTGEKVSPFDSKAIPRPASDS 828
Query: 362 KLI-HPDEDISLEERRAQLPKYQRNLPRPGQA-----------PIGNP-PVG--PIGGMM 406
K+I HP + ++ P ++ P+ Q P G+P P G P G
Sbjct: 829 KIISHPGPSSESKGQKQVDPVQKKEEPKKAQTKMSPKPDAKPMPKGSPTPPGPRPTAGQT 888
Query: 407 PPQP---GIPQQQGMR--------------PPMPPH------------------------ 425
P P PQ+Q R P P
Sbjct: 889 VPTPQQSPKPQEQSRRFSLNLGSITDAPKSQPTTPQETVTGKLFGFGASIFSQASNLIST 948
Query: 426 -GQYGGHHQGMPGYLPGAMPPYGQGP-PMVPPYQGGPPRPPMGMRPP 470
GQ G H Q PG P Q P P PP GPP+ G PP
Sbjct: 949 AGQPGPHSQSGPG------APMKQAPAPSQPPTSQGPPK-STGQAPP 988
Score = 46.6 bits (109), Expect = 5e-05
Identities = 66/259 (25%), Positives = 88/259 (33%), Gaps = 43/259 (16%)
Query: 225 QAVSAPGILNRPPAPTATVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKA 284
+ + P + +PP P +P Q P PL Q GTP S +S E + +
Sbjct: 204 EGIIKPPLQQQPPKP---IPKQQGPGRDPL----QQDGTP---KSISSQQPEKIKSQP-- 251
Query: 285 LFPSTAQAQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPA 344
P T + +QGP T T P ++ + KP+
Sbjct: 252 --PGTGKP---IQGPTQTP---------QTDHAKLPLQRDASRPQTKQADIVRGESVKPS 297
Query: 345 ASITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGN--PPVGPI 402
SKP T P + S + A+ P L +P G PPV P
Sbjct: 298 LPSPSKPPIQQPTPGKPPAQQPGHEKS-QPGPAKPPAQPSGLTKPLAQQPGTVKPPVQPP 356
Query: 403 GGMMPPQPGIPQQQGMRPPMPPHGQYGGHHQG--MPGYLPGAMPPYGQGPPMVPPYQGGP 460
G PP Q + P PP Q G PG A PP G P Q GP
Sbjct: 357 GTTKPPA------QPLGPAKPPAQQTGSEKPSSEQPGPKALAQPP---GVGKTPAQQPGP 407
Query: 461 PRPP---MGMRPPVMSQGG 476
+PP +G P+ Q G
Sbjct: 408 AKPPTQQVGTPKPLAQQPG 426
Score = 45.8 bits (107), Expect = 8e-05
Identities = 57/238 (23%), Positives = 86/238 (36%), Gaps = 38/238 (15%)
Query: 153 APGMPPGIPPL--MPGVP-PLMPGMPPVMPGMPPGMMPMGGMMPPGPGIPPLMPGMPPGM 209
A +P G P + +P P P + PP P PP P PP PP +
Sbjct: 2373 ASQLPSGSPSVSSLPAKPRPFFRSSSLDISAQPPPPPPPPPPPPPPPPPPP-----PPPL 2427
Query: 210 PPPV-PRPGIPPMTQAQAVSAPGILNRPPAPTATVPAPQPPVTKPLFPSAGQMGTPVTSS 268
PPP P+P I P + S P TAT PLF + T + ++
Sbjct: 2428 PPPTSPKPTILPKKKLTVAS--------PVTTAT----------PLFDAV----TTLETT 2465
Query: 269 STASSNSESLSASSKALFPSTAQAQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQS 328
+ SN ++ P +++ + +P S P +P P P TQ
Sbjct: 2466 AVLRSNGLPVTRICTTAPPPVPPKPSSIPSGLVFTHRPEPSKPPIAPKPVIPQLPTTTQ- 2524
Query: 329 TASTTSTTNSTAAKPAASITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNL 386
T+ S+TS TSA KL P +S ++ P++ ++L
Sbjct: 2525 -----KPTDIHPKPTGLSLTSSMTLNLVTSADYKLPSPTSPLSPHSNKSS-PRFSKSL 2576
Score = 43.9 bits (102), Expect = 3e-04
Identities = 75/322 (23%), Positives = 117/322 (36%), Gaps = 59/322 (18%)
Query: 120 DSAASTSFQPQPVQPQQGYIPPMAQPGLPPVPGAPGMPPGIP--------------PLMP 165
D +A P P P PP P LPP P +P P +P PL
Sbjct: 2400 DISAQPPPPPPPPPPPPPPPPPPPPPPLPP-PTSP-KPTILPKKKLTVASPVTTATPLFD 2457
Query: 166 GVPPL-------MPGMP--PVMPGMPPGMMPMGGMMP--------PGPGIPPLMP-GMPP 207
V L G+P + PP + P +P P P PP+ P + P
Sbjct: 2458 AVTTLETTAVLRSNGLPVTRICTTAPPPVPPKPSSIPSGLVFTHRPEPSKPPIAPKPVIP 2517
Query: 208 GMPPPVPRP-GIPPMTQAQAVSAPGILNRPPAPTATVPAPQPPV------TKPLFPSA-- 258
+P +P I P ++++ LN + +P+P P+ + P F +
Sbjct: 2518 QLPTTTQKPTDIHPKPTGLSLTSSMTLNLVTSADYKLPSPTSPLSPHSNKSSPRFSKSLT 2577
Query: 259 ---------GQMGTPVTSSSTASSNSESLSASSKALFP-----STAQAQAAVQGPVGTDF 304
+ GTP SS++ + S L + SK L S AV+ P+ ++
Sbjct: 2578 ETYVVITLPSEPGTPTDSSASQAITSWPLGSPSKDLVSVEPVFSVVPPVTAVEIPISSEQ 2637
Query: 305 KPLNSTPATTTEPPKPTFPAYTQST-ASTTSTTNSTAAKPAASITSKPATLTTTSATSKL 363
S T T P+ Q+ S T + +K S T A S+ S
Sbjct: 2638 TFYISGALQTFSATPVTAPSSFQAAPTSVTQFLTTEVSKTEVSATRSTAPSVGLSSISIT 2697
Query: 364 IHPDEDISLEERRAQLPKYQRN 385
I P E ++L+ + P+Y+ +
Sbjct: 2698 I-PPEPLALDNIHLEKPQYKED 2718
Score = 43.1 bits (100), Expect = 6e-04
Identities = 55/237 (23%), Positives = 77/237 (32%), Gaps = 52/237 (21%)
Query: 128 QPQPVQPQQGYIPPMAQPGLPPVPGAPGMPPGIPPLMPGVPPLMPGMPPVMPGMPPGMMP 187
Q PVQ ++ P AQ + P P A MP G P PPG P
Sbjct: 845 QVDPVQKKEE--PKKAQTKMSPKPDAKPMPKGSP-------------------TPPGPRP 883
Query: 188 MGGMMPPGPGIPPLMPGM-------------PPGMPPPVPRP---------GIPPMTQAQ 225
G P P P P P P+ G +QA
Sbjct: 884 TAGQTVPTPQQSPKPQEQSRRFSLNLGSITDAPKSQPTTPQETVTGKLFGFGASIFSQAS 943
Query: 226 AV------SAPGILNRPPAPTATVPAP-QPPVTKPLFPSAGQMGTPVTSSSTASSNSESL 278
+ P + P AP PAP QPP ++ S GQ P + + E+
Sbjct: 944 NLISTAGQPGPHSQSGPGAPMKQAPAPSQPPTSQGPPKSTGQ--APPAPAKSIPVKKETK 1001
Query: 279 SASSKALFPSTAQAQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTST 335
+ +++ L P QA + P+ + + T EP K P + + ST
Sbjct: 1002 APAAEKLEPKAEQAPTVKRTETEKKPPPIKDSKSLTAEPQKAVLPTKLEKSPKPEST 1058
Score = 42.4 bits (98), Expect = 0.001
Identities = 78/339 (23%), Positives = 111/339 (32%), Gaps = 64/339 (18%)
Query: 121 SAASTSFQPQPVQPQQGYIPPMAQPGLPPVPGAPGMPPGIPPLMPGVPPLMPGMPPVMPG 180
+ + +S QPQ P++ P P P PPL+ P + G P
Sbjct: 671 AVSKSSPQPQQTSPKKDAAPKQDLSKAPE-------PKKPPPLVK--QPTLHGSPSAKAK 721
Query: 181 MPPGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQ--AQAVSAPGILNRPPA 238
PP + P P P +P P +P P M + VS+ +P
Sbjct: 722 QPP---EADSLSKPAPPKEPSVPSEQDKAPVADDKPKQPKMVKPTTDLVSSSSATTKPDI 778
Query: 239 PTATVPAPQPPVTKP-----------LFPSAGQMGTPVTSSSTASSNSESLSASSKALFP 287
P++ V + T P FP G+ +P S + S+S S P
Sbjct: 779 PSSKVQSQAEEKTTPPLKTDSAKPSQSFPPTGEKVSPFDSKAIPRPASDSKIISHPG--P 836
Query: 288 STAQAQAAVQGPVGTDFKPLNSTPATTTEP-----PK--PTFPAYTQSTASTTSTTNSTA 340
S+ PV +P + + +P PK PT P + TA T T +
Sbjct: 837 SSESKGQKQVDPVQKKEEPKKAQTKMSPKPDAKPMPKGSPTPPG-PRPTAGQTVPTPQQS 895
Query: 341 AKPA----------ASITSKPATLTTTSATSKLIHPDEDIS--LEERRAQLPKYQRNLPR 388
KP SIT P + TT P E ++ L A + NL
Sbjct: 896 PKPQEQSRRFSLNLGSITDAPKSQPTT--------PQETVTGKLFGFGASIFSQASNLIS 947
Query: 389 PGQAPIGNPPVGPIGGMMPPQPGIPQQQGMRPPMPPHGQ 427
P + GP G P +Q P PP Q
Sbjct: 948 TAGQPGPHSQSGP---------GAPMKQAPAPSQPPTSQ 977
Score = 40.8 bits (94), Expect = 0.003
Identities = 55/233 (23%), Positives = 78/233 (33%), Gaps = 18/233 (7%)
Query: 141 PMAQPGLPPVPGAP-----GMPPGIPPLMPGVPPLMPGMPPVMPGMPPGMMPMGGMMPPG 195
P P + +P P I P PP P PP P PP +P PP
Sbjct: 2377 PSGSPSVSSLPAKPRPFFRSSSLDISAQPPPPPPPPPPPPPPPPPPPPPPLP-----PPT 2431
Query: 196 PGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTATVPAPQPPVTKPLF 255
P ++P + PV P + +L P + PP P
Sbjct: 2432 SPKPTILPKKKLTVASPV-TTATPLFDAVTTLETTAVLRSNGLPVTRICTTAPPPVPPK- 2489
Query: 256 PSAGQMGTPVTSSSTASSNSESLSASSKALFPSTAQAQAAVQ-GPVG---TDFKPLNSTP 311
PS+ G T S + L P+T Q + P G T LN
Sbjct: 2490 PSSIPSGLVFTHRPEPSKPPIAPKPVIPQL-PTTTQKPTDIHPKPTGLSLTSSMTLNLVT 2548
Query: 312 ATTTEPPKPTFPAYTQSTASTTSTTNS-TAAKPAASITSKPATLTTTSATSKL 363
+ + P PT P S S+ + S T ++ S+P T T +SA+ +
Sbjct: 2549 SADYKLPSPTSPLSPHSNKSSPRFSKSLTETYVVITLPSEPGTPTDSSASQAI 2601
Score = 32.0 bits (71), Expect = 1.3
Identities = 20/62 (32%), Positives = 37/62 (59%), Gaps = 5/62 (8%)
Query: 60 ETIDAVPNAIPGRTDIELEIYGMEG----IPEKDMDERRRLLEQKTQESQKKKQQDDSDE 115
ETID+VP + +++ E+ G E +PE+D +++ LE++ E +K KQQ ++E
Sbjct: 3176 ETIDSVPT-LTTASEVFPEVVGDESALLIVPEEDKQQQQLDLERELLELEKIKQQRFAEE 3234
Query: 116 YD 117
+
Sbjct: 3235 LE 3236
>gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens]
Length = 1003
Score = 73.9 bits (180), Expect = 3e-13
Identities = 101/398 (25%), Positives = 134/398 (33%), Gaps = 100/398 (25%)
Query: 146 GLPPVPGAPGMPPGIPPLM--------PGVPP-----LMPG---MPPVMPG---MPPGMM 186
G PP P A PP PPL P +PP PG PPV +P +
Sbjct: 243 GSPPAPHASSSPPSDPPLFHCSDALTPPPLPPSNNLPAHPGPASQPPVSSATMHLPLVLG 302
Query: 187 PMGGMMP-PGPGIPPLMPG---------MPPGMPPPVPRPGIPPMTQAQAVSAPGILN-- 234
P+GG GPG PP + P +PPP G P QA + S L
Sbjct: 303 PLGGAPTVEGPGAPPFLASSLLSAAAKAQHPPLPPPSTLQGRRPRAQAPSASHSSSLRPS 362
Query: 235 -----RPPA-----------------PTATVPAPQP----PVTKPLFPSA-GQMGTPVTS 267
RPP P A P PQP ++P+ PS +G P
Sbjct: 363 QRRPRRPPTVFRLLEGRGPQTPRRSRPRAPAPVPQPFSLPEPSQPILPSVLSLLGLPTPG 422
Query: 268 SSTASSNSESLSASSKALFPSTAQAQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQ 327
S + + L + + P T + + PP+P P
Sbjct: 423 PSHSDGSFNLLGSDAHLPPPPTLSSGS----------------------PPQPRHPIQPS 460
Query: 328 STASTTSTTNSTAAKPAASITSKPATLTTTSATSKLIHPDEDISLEERRA-QLPKYQRNL 386
+T+ + +S PA SK + + S P E + + A LP
Sbjct: 461 LPGTTSGSLSSVPGAPAPPAASKAPVVPSPVLQS----PSEGLGMGAGPACPLPPLAGGE 516
Query: 387 PRPGQAPIGNPPVGPIG--GMMPPQPGIPQQQGMRPPMP--PHGQYG--GHHQGMPGYLP 440
P +P + G GM+ P +P G PP P H +G G P P
Sbjct: 517 AFPFPSPEQGLALSGAGFPGMLGALP-LPLSLGQPPPSPLLNHSLFGVLTGGGGQPPPEP 575
Query: 441 GAMPPYGQGPPMVPPYQGGP--------PRPPMGMRPP 470
PP G GPP+ P GP P PP + PP
Sbjct: 576 LLPPPGGPGPPLAPGEPEGPSLLVASLLPPPPSDLLPP 613
Score = 65.1 bits (157), Expect = 1e-10
Identities = 90/365 (24%), Positives = 121/365 (33%), Gaps = 56/365 (15%)
Query: 140 PPMAQPGLPPVPGAPGMPPGIPPLMPGVPPLMPGMPPVMPGMPPGMMPMGGMMPPGPGIP 199
PP P P+ G PG P PP + P + G + P +P GG P +P
Sbjct: 147 PPCRVPPTTPLNGGPGSLPPEPPSVSQAFPTLAGPGGLFPPRLADPVPSGGSSSP-RFLP 205
Query: 200 PLMPGMPPGMPPPVPRPGIPPMTQAQAVSA---PGILNRPPAPTATVPAPQPPVTKPLFP 256
P PPP P A+ + P L PPAP A + PP PLF
Sbjct: 206 RGNAPSPAPPPPPAISLNAPSYNWGAALRSSLVPSDLGSPPAPHA---SSSPPSDPPLFH 262
Query: 257 SAGQMGTPVTSSST--------ASSNSESLSASSKALFPSTAQAQAAVQGPVGTDF--KP 306
+ + P S AS S + L V+GP F
Sbjct: 263 CSDALTPPPLPPSNNLPAHPGPASQPPVSSATMHLPLVLGPLGGAPTVEGPGAPPFLASS 322
Query: 307 LNSTPATTTEPPKPTFPAYTQS---TASTTSTTNSTAAKPAASITSKPATLTTTSATSKL 363
L S A PP P P+ Q A S ++S++ +P+ +P T+
Sbjct: 323 LLSAAAKAQHPPLPP-PSTLQGRRPRAQAPSASHSSSLRPSQRRPRRPPTVFRL------ 375
Query: 364 IHPDEDISLEERRAQLPKYQR-NLPRPGQAPIGNPPVGPIGGMMPPQPGIPQQQGMRPPM 422
LE R Q P+ R P P P P P P + G+ P
Sbjct: 376 --------LEGRGPQTPRRSRPRAPAPVPQPFSLPEPS-----QPILPSVLSLLGLPTPG 422
Query: 423 PPHGQYGGHHQGMPGYLP------GAMPPYGQGP--PMVPPYQG-------GPPRPPMGM 467
P H + G +LP PP + P P +P G P PP
Sbjct: 423 PSHSDGSFNLLGSDAHLPPPPTLSSGSPPQPRHPIQPSLPGTTSGSLSSVPGAPAPPAAS 482
Query: 468 RPPVM 472
+ PV+
Sbjct: 483 KAPVV 487
Score = 62.8 bits (151), Expect = 7e-10
Identities = 106/434 (24%), Positives = 146/434 (33%), Gaps = 86/434 (19%)
Query: 113 SDEYDDDDSAASTSFQPQPVQPQQGYIPPMAQPGLPPVPGAPGMP-----PGIPP----- 162
SD + S+ PQP P Q +P L VPGAP P P +P
Sbjct: 435 SDAHLPPPPTLSSGSPPQPRHPIQPSLPGTTSGSLSSVPGAPAPPAASKAPVVPSPVLQS 494
Query: 163 ----LMPGVPPLMPGMPPVMPGMP-PGMMPMGGMMPPGPGIP--------PLMPGMPP-- 207
L G P P +PP+ G P P G+ G G P PL G PP
Sbjct: 495 PSEGLGMGAGPACP-LPPLAGGEAFPFPSPEQGLALSGAGFPGMLGALPLPLSLGQPPPS 553
Query: 208 ---------------GMPPP---VPRPGIP-PMTQAQAVSAPGILNR---PPAPTATVPA 245
G PPP +P PG P P P +L PP P+ +P
Sbjct: 554 PLLNHSLFGVLTGGGGQPPPEPLLPPPGGPGPPLAPGEPEGPSLLVASLLPPPPSDLLPP 613
Query: 246 PQPPVTK---------PLFPSAGQ-MGTPVTSSSTASSNSESLSASSKALFP-------- 287
P P + L P+AG G+ + + L S LFP
Sbjct: 614 PSAPPSNLLASFLPLLALGPTAGDGEGSAEGAGGPSGEPFSGLGDLSPLLFPPLSAPPTL 673
Query: 288 ---STAQAQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKP- 343
++A A + P GT +P + P A T AS+ S + +P
Sbjct: 674 IALNSALLAATLDPPSGTPPQPCVLSAPQPGPPTSSVTTATTDPGASSLGKAPSNSGRPP 733
Query: 344 -------AASITSKPATLTTT-SATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIG 395
AS+ ++LT++ A L+ P + + QL LP G P
Sbjct: 734 QLLSPLLGASLLGDLSSLTSSPGALPSLLQPPGPLLSGQLGLQL------LPGGGAPPPL 787
Query: 396 NPPVGPIGGMMPPQPGIPQQQGMRPPMPPHGQYGG-HHQGMPGYLPGAMPPYGQGPPMVP 454
+ P+ ++ IP +Q P +PP + L PP+G P VP
Sbjct: 788 SEASSPLACLLQSLQ-IPPEQPEAPCLPPESPASALEPEPARPPLSALAPPHGSPDPPVP 846
Query: 455 PYQGGPPRPPMGMR 468
G G R
Sbjct: 847 ELLTGRGSGKRGRR 860
>gi|15890086 type IV collagen alpha 5 isoform 2 precursor [Homo
sapiens]
Length = 1691
Score = 73.6 bits (179), Expect = 4e-13
Identities = 102/394 (25%), Positives = 129/394 (32%), Gaps = 75/394 (19%)
Query: 129 PQPVQPQQGYIPPMAQPGLPPVPGAPGM--------PPGIP-----------PLMPGVPP 169
P P P+ G P PG P PG PGM P GIP P PG P
Sbjct: 83 PGPPGPK-GIRGPPGLPGFPGTPGLPGMPGHDGAPGPQGIPGCNGTKGERGFPGSPGFPG 141
Query: 170 LM-PGMPPVMPGM--PPGMM-------PMGGMMPPGP----------GIP-PLMPGMPPG 208
L P PP +PGM PG + P G PGP GIP P+ P PPG
Sbjct: 142 LQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNPGYPGPPGIQGLPGPTGIPGPIGPPGPPG 201
Query: 209 MPPPVPRPGIPPMTQAQAVSAPGI--------LNRPPAPTATVPAPQPPVTKPLFPSAGQ 260
+ P PG+P ++ G L PP P + + P+ G
Sbjct: 202 LMGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGPPGQISEQKRPIDVEF--QKGD 259
Query: 261 MGTPVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPVGTDFKP----LNSTPATTTE 316
G P P + + QG G KP N P
Sbjct: 260 QGLPGDRGPPGPPGIRGPPGP-----PGGEKGEKGEQGEPGKRGKPGKDGENGQPGIPGL 314
Query: 317 PPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSATSKLIHPDEDISLEERR 376
P P +P ++ P + +P T T + P ER
Sbjct: 315 PGDPGYPGEPGRDGEKGQKGDTGPPGPPGLVIPRPGTGITIGEKGNIGLPGLPGEKGERG 374
Query: 377 AQLPKYQRNLPRPGQAPIGNPPVGPIGGMMPPQPGIPQQQGMRPPMPPHGQYGGHHQGMP 436
+ LP P A + PP GP PG P ++G + P G G+
Sbjct: 375 FPGIQGPPGLPGPPGAAVMGPP-GP--------PGFPGERGQKGDEGPPGISIPGPPGLD 425
Query: 437 GY--LPGAMPPYGQGPPMVPP----YQGGPPRPP 464
G PG P G P +PP + GPP PP
Sbjct: 426 GQPGAPGLPGPPGPAGPHIPPSDEICEPGPPGPP 459
Score = 73.6 bits (179), Expect = 4e-13
Identities = 105/376 (27%), Positives = 128/376 (34%), Gaps = 83/376 (22%)
Query: 141 PMAQPGLPPVPGAPGMPPGI----PPLMPGVP----------PLMPGMPPVMPGMPPGMM 186
P PG+P PGAPG P I PP PG P P PG PP +PG +
Sbjct: 714 PKGFPGIPGPPGAPGTPGRIGLEGPPGPPGFPGPKGEPGFALPGPPG-PPGLPGFKGALG 772
Query: 187 PMGGMMPPGPGIPPLMPGM--------------------PPGMP------PPVPRPGIP- 219
P G PGP PP G+ PPG+P PP P PGIP
Sbjct: 773 PKGDRGFPGPPGPPGRTGLDGLPGPKGDVGPNGQPGPMGPPGLPGIGVQGPPGP-PGIPG 831
Query: 220 PMTQAQAVSAPGILNRPPAPTATVPAPQPPVTKPLFPSA-GQMGTPVTSSSTASSNSESL 278
P+ Q PG P P VP P P P A G +G P + + +
Sbjct: 832 PIGQPGLHGIPGEKGDPGPPGLDVPGPPGERGSPGIPGAPGPIGPPGSPGLPGKAGASG- 890
Query: 279 SASSKALFPSTAQAQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAY-----TQSTASTT 333
FP T + + + GP G P P + P Q
Sbjct: 891 -------FPGT-KGEMGMMGPPG--------PPGPLGIPGRSGVPGLKGDDGLQGQPGLP 934
Query: 334 STTNSTAAKPAASITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNLP-RPGQA 392
T +K + P + SK + + PK + LP PGQ
Sbjct: 935 GPTGEKGSKGEPGLPGPPGPMDPNLLGSKGEKGEPGLP-GIPGVSGPKGYQGLPGDPGQP 993
Query: 393 PI-GNP----PVGPIGGMMPPQPGIPQQQGMRPPMPPHGQYGGHHQGMPGYLPGAMPPYG 447
+ G P P GP G PG+P Q G+ P G G G PG PP
Sbjct: 994 GLSGQPGLPGPPGPKG-----NPGLPGQPGLIGPPGLKGTIG--DMGFPGPQGVEGPP-- 1044
Query: 448 QGPPMVPPYQGGPPRP 463
GP VP G P P
Sbjct: 1045 -GPSGVPGQPGSPGLP 1059
Score = 72.8 bits (177), Expect = 6e-13
Identities = 105/391 (26%), Positives = 141/391 (36%), Gaps = 75/391 (19%)
Query: 135 QQGYIPPMAQPGLPPVPGAPGMP-----------PGIP-----------PLMPGVP-PLM 171
+ G + P PG +PG G+P PG+P P +PG P P+
Sbjct: 897 EMGMMGPPGPPGPLGIPGRSGVPGLKGDDGLQGQPGLPGPTGEKGSKGEPGLPGPPGPMD 956
Query: 172 PGM--------PPVMPGMPPGMMPMGGMMPPG-PGIPPL--MPGMPPGMPPPVPRPGIPP 220
P + P +PG+P P G PG PG P L PG+ PG P P PG+P
Sbjct: 957 PNLLGSKGEKGEPGLPGIPGVSGPKGYQGLPGDPGQPGLSGQPGL-PGPPGPKGNPGLP- 1014
Query: 221 MTQAQAVSAPGILNRPPAPTATV-----PAPQPPVTKPLFPSA--GQMGTPVTSSSTASS 273
PG++ PP T+ P PQ V P PS GQ G+P
Sbjct: 1015 -------GQPGLIG-PPGLKGTIGDMGFPGPQ-GVEGPPGPSGVPGQPGSPGLPGQKGDK 1065
Query: 274 NSESLSASSKALFPSTA--------QAQAAVQGPVGTDFKP-LNSTPATTTEPPKPTFPA 324
+S+ P ++G VG P L TP +P P FP
Sbjct: 1066 GDPGISSIGLPGLPGPKGEPGLPGYPGNPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFP- 1124
Query: 325 YTQSTASTTSTTNSTAAKPAASITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQR 384
T + + +P + + P E + P Q+
Sbjct: 1125 ---GTPGPPGPKGISGPPGNPGLPGEPGPVGGGGHPGQPGPPGEKGKPGQDGIPGPAGQK 1181
Query: 385 NLPRPGQAPIGNPPVGPIGGMMPPQ-----PGIPQQQGMRPPMPPHGQYG-GHHQGMPGY 438
PGQ GNP + G+ + PGIP G+ P G +G QG PG
Sbjct: 1182 G--EPGQPGFGNPGPPGLPGLSGQKGDGGLPGIPGNPGLPGPKGEPGFHGFPGVQGPPG- 1238
Query: 439 LPGAMPPYGQGPPMVPPYQGGPPRP-PMGMR 468
PG+ P +GP P QG P RP P G +
Sbjct: 1239 PPGSPGPALEGPKGNPGPQGPPGRPGPTGFQ 1269
Score = 62.8 bits (151), Expect = 7e-10
Identities = 103/403 (25%), Positives = 128/403 (31%), Gaps = 87/403 (21%)
Query: 135 QQGYIPPMAQPGLPPVPGAPGMP-----PGIPPLMPGV-----------PPLMPGMPPV- 177
Q G P PG+P PGAPG P PG PG+ P +PG+P
Sbjct: 519 QAGATGPKGLPGIPGAPGAPGFPGSKGEPGDILTFPGMKGDKGELGSPGAPGLPGLPGTP 578
Query: 178 ----MPGMPPGMMPMGGMMPPGPGIPPLMPGMP--PGMPPPVPRPGIPPMTQAQAVSAPG 231
+PG+P GG+ G PP PG+P PG P+ PG P G
Sbjct: 579 GQDGLPGLPGPKGEPGGITFKGERGPPGNPGLPGLPGNIGPMGPPGFGPPGPVGEKGIQG 638
Query: 232 ILNRPPAPTATVPAPQPPVT-----KPLFPS----------------AGQMGTPVTSSST 270
+ P P P P T KP P GQ G P S
Sbjct: 639 VAGNPGQPGIPGPKGDPGQTITQPGKPGLPGNPGRDGDVGLPGDPGLPGQPGLPGIPGSK 698
Query: 271 ASSNSESLSASSKALFPSTAQAQAAVQGPVGTDFKP----LNSTPATTTEPPKPTFPAYT 326
+ P + + GP G P L P P P +
Sbjct: 699 GEPGIPGIGLPG----PPGPKGFPGIPGPPGAPGTPGRIGLEGPPGPPGFPGPKGEPGFA 754
Query: 327 ----QSTASTTSTTNSTAAKPAASITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKY 382
+ K P T L P D+ + P
Sbjct: 755 LPGPPGPPGLPGFKGALGPKGDRGFPGPPGPPGRTGLDG-LPGPKGDVGPNGQPG--PMG 811
Query: 383 QRNLPRPG-QAPIGNPPV-GPIG--GM--MPPQPGIPQQQGMRPPMPPHGQYGGHHQGMP 436
LP G Q P G P + GPIG G+ +P + G P G+ P PP +G P
Sbjct: 812 PPGLPGIGVQGPPGPPGIPGPIGQPGLHGIPGEKGDPGPPGLDVPGPP------GERGSP 865
Query: 437 GYLPGAMPPYG-QGPPMVPPYQG--------------GPPRPP 464
G +PGA P G G P +P G GPP PP
Sbjct: 866 G-IPGAPGPIGPPGSPGLPGKAGASGFPGTKGEMGMMGPPGPP 907
Score = 61.6 bits (148), Expect = 1e-09
Identities = 98/367 (26%), Positives = 127/367 (34%), Gaps = 57/367 (15%)
Query: 136 QGYIPPMAQPGLPPVPGAPGMPPGIPPLMPGVP-----PLMPGMPPVM--PGMPPGMMPM 188
+G + P QPG PG PG+ PP PG+P P + G+P PG PPG+
Sbjct: 798 KGDVGPNGQPGPMGPPGLPGIGVQGPPGPPGIPGPIGQPGLHGIPGEKGDPG-PPGLDVP 856
Query: 189 GGMMPPG----PGIP----PLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPT 240
G PPG PGIP P+ P PG+P G P + P PP P
Sbjct: 857 G---PPGERGSPGIPGAPGPIGPPGSPGLPGKAGASGFPGTKGEMGMMGP---PGPPGPL 910
Query: 241 ATVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKALFPSTAQAQA------ 294
P K GQ G P + S L + P+ ++
Sbjct: 911 GIPGRSGVPGLKGDDGLQGQPGLPGPTGEKGSKGEPGLPGPPGPMDPNLLGSKGEKGEPG 970
Query: 295 -----AVQGPVGTDFKPLN-STPATTTEP--PKPTFPAYTQSTASTTSTTNSTAAKPAAS 346
V GP G P + P + +P P P P K
Sbjct: 971 LPGIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPPGPKGNPGLPGQPGLIGPPGLKGTIG 1030
Query: 347 ITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNPPV-GPIGGM 405
P P + S LP + + PG + IG P + GP G
Sbjct: 1031 DMGFPGPQGVEGPPGPSGVPGQPGS-----PGLPGQKGDKGDPGISSIGLPGLPGPKG-- 1083
Query: 406 MPPQPGIPQQQGMRPPMPPHGQYGGHHQGMPGYLPGAMPPYGQGPPMVPPYQG--GPPRP 463
P PG P G++ G G G+PG LPG P +G P +P + G GPP P
Sbjct: 1084 EPGLPGYPGNPGIK------GSVG--DPGLPG-LPGT--PGAKGQPGLPGFPGTPGPPGP 1132
Query: 464 PMGMRPP 470
PP
Sbjct: 1133 KGISGPP 1139
Score = 58.9 bits (141), Expect = 1e-08
Identities = 108/401 (26%), Positives = 137/401 (34%), Gaps = 79/401 (19%)
Query: 129 PQPVQPQQGYIPPMAQPGLPPVPGAPG--MPPGIPPL-MPGVP-----PLMPGMP----- 175
PQ V+ G QPG P +PG G PGI + +PG+P P +PG P
Sbjct: 1037 PQGVEGPPGPSGVPGQPGSPGLPGQKGDKGDPGISSIGLPGLPGPKGEPGLPGYPGNPGI 1096
Query: 176 ------PVMPGMP--PGMMPMGGMM-------PPGP-GI--PPLMPGMPPGMPPPVPRPG 217
P +PG+P PG G+ PPGP GI PP PG+ PG P PV G
Sbjct: 1097 KGSVGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGISGPPGNPGL-PGEPGPVGGGG 1155
Query: 218 IPPMTQAQAVSAPGILNRPPAPTATVPAPQP-PVTKPLFPSAGQMGTPVTSSSTASSNSE 276
P PG +P PA Q +P F + G G P S
Sbjct: 1156 HPGQP-----GPPGEKGKPGQDGIPGPAGQKGEPGQPGFGNPGPPGLPGLSGQKGDGGLP 1210
Query: 277 SLSASSKALFPSTA---QAQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQSTASTT 333
+ + P VQGP G +P E PK
Sbjct: 1211 GIPGNPGLPGPKGEPGFHGFPGVQGPPGPP-----GSPGPALEGPKG-----NPGPQGPP 1260
Query: 334 STTNSTAAKPAASITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAP 393
T + P + +P + LP + + PG
Sbjct: 1261 GRPGPTGFQGLPGPEGPPGLPGNGGIKGEKGNPG-----QPGLPGLPGLKGDQGPPGLQ- 1314
Query: 394 IGNPPVGPIGGMM--PPQPGIPQQQGMRPPMPPHGQYGGHHQGMPGYL-----PGAMPPY 446
GNP + GM P PG+P GM+ P G G +G PG + PG P
Sbjct: 1315 -GNPGRPGLNGMKGDPGLPGVPGFPGMKGPSGVPGSAG--PEGEPGLIGPPGPPGLPGPS 1371
Query: 447 GQ--------GPPMVPPYQG--GPPRP--PMGMRPPVMSQG 475
GQ GPP +P G G P P P G+ P G
Sbjct: 1372 GQSIIIKGDAGPPGIPGQPGLKGLPGPQGPQGLPGPTGPPG 1412
Score = 57.8 bits (138), Expect = 2e-08
Identities = 100/379 (26%), Positives = 130/379 (34%), Gaps = 77/379 (20%)
Query: 135 QQGYIPPMAQPGLPPVPGAPGMP-----------PGIPPLMPGV--PPLMPGMP--PVMP 179
++G+ PGLP PG G P PG PP G+ PP +PG P P +P
Sbjct: 49 ERGFPGLEGHPGLPGFPGPEGPPGPRGQKGDDGIPG-PPGPKGIRGPPGLPGFPGTPGLP 107
Query: 180 GMP-----PGMMPMGGM--------MPPGPGIPPLM-PGMPPGMPPPVPRPGIPPMTQAQ 225
GMP PG + G P PG P L P PPG+P PG M+
Sbjct: 108 GMPGHDGAPGPQGIPGCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSIIMSSLP 167
Query: 226 AVSA-PGILNRP-----PAPTATVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLS 279
PG P P PT +P P P P G MG P + L+
Sbjct: 168 GPKGNPGYPGPPGIQGLPGPTG-IPGPIGPPGPP-----GLMGPPGPPGLPGPKGNMGLN 221
Query: 280 ASSKALFPSTAQAQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNST 339
P + + +QGP G P +E +P + +
Sbjct: 222 FQG----PKGEKGEQGLQGPPG--------PPGQISEQKRPIDVEFQKGDQGLPGDRGPP 269
Query: 340 AAK----PAASITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIG 395
P + K P +D E + +P + PG+ P
Sbjct: 270 GPPGIRGPPGPPGGEKGEKGEQGEPGKRGKPGKD--GENGQPGIPGLPGDPGYPGE-PGR 326
Query: 396 NPPVGPIGGMMPPQPGIPQQQGMRPPMPPHGQYGGH--HQGMPGYLPGAMPPYG----QG 449
+ G G PP P G+ P P G G + G+PG LPG G QG
Sbjct: 327 DGEKGQKGDTGPPGP-----PGLVIPRPGTGITIGEKGNIGLPG-LPGEKGERGFPGIQG 380
Query: 450 PPMVPPYQG----GPPRPP 464
PP +P G GPP PP
Sbjct: 381 PPGLPGPPGAAVMGPPGPP 399
Score = 57.8 bits (138), Expect = 2e-08
Identities = 115/424 (27%), Positives = 141/424 (33%), Gaps = 103/424 (24%)
Query: 135 QQGYIPPMAQPGLPPVPGAPGMPPGIPPLMPGV--------PP--LMPGMPPVMPGMPPG 184
++G+ PGLP PGA M P PP PG PP +PG PP + G P
Sbjct: 372 ERGFPGIQGPPGLPGPPGAAVMGPPGPPGFPGERGQKGDEGPPGISIPG-PPGLDGQPGA 430
Query: 185 MMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSA--------------- 229
G P GP IPP PG P P PG + Q V
Sbjct: 431 PGLPGPPGPAGPHIPPSDEICEPGPPGPPGSPGDKGLQGEQGVKGDKGDTCFNCIGTGIS 490
Query: 230 -----PGILNRPPAP---------------TATVPAPQPPVT----KPLFP-SAGQMGTP 264
PG+ P P AT P P + P FP S G+ G
Sbjct: 491 GPPGQPGLPGLPGPPGSLGFPGQKGEKGQAGATGPKGLPGIPGAPGAPGFPGSKGEPGDI 550
Query: 265 VTSSSTASSNSESLSASSKAL--FPSTAQAQAAVQG-------PVGTDFKPLNSTPATTT 315
+T E S + L P T Q + G P G FK P
Sbjct: 551 LTFPGMKGDKGELGSPGAPGLPGLPGT-PGQDGLPGLPGPKGEPGGITFKGERGPPGNPG 609
Query: 316 EPPKPTF------PAYTQSTASTTSTTNSTAAKPAASITSKP-----ATLTTTSATSKLI 364
P P P + A P P T+T
Sbjct: 610 LPGLPGNIGPMGPPGFGPPGPVGEKGIQGVAGNPGQPGIPGPKGDPGQTITQPGKPGLPG 669
Query: 365 HP--DEDISLE-----ERRAQLPKYQRNLPRPGQAPIGNP-PVGPIG--GM--MPPQPGI 412
+P D D+ L + LP + PG IG P P GP G G+ P PG
Sbjct: 670 NPGRDGDVGLPGDPGLPGQPGLPGIPGSKGEPGIPGIGLPGPPGPKGFPGIPGPPGAPGT 729
Query: 413 PQQQGMRPPMPPHGQYGGHHQGMPGY-LPGAMPPYGQGPPMVPPYQG-----------GP 460
P + G+ P P G G +G PG+ LPG PP GPP +P ++G GP
Sbjct: 730 PGRIGLEGPPGPPGFPG--PKGEPGFALPG--PP---GPPGLPGFKGALGPKGDRGFPGP 782
Query: 461 PRPP 464
P PP
Sbjct: 783 PGPP 786
Score = 55.8 bits (133), Expect = 8e-08
Identities = 97/381 (25%), Positives = 119/381 (31%), Gaps = 98/381 (25%)
Query: 144 QPGLPPVPGAPGMPPGI-----PPLMPGVP-----------PLMPGMP-----PVMPGMP 182
QPGLP PG PG PPG PP PG+P P PG P P G+P
Sbjct: 1117 QPGLPGFPGTPG-PPGPKGISGPPGNPGLPGEPGPVGGGGHPGQPGPPGEKGKPGQDGIP 1175
Query: 183 --------PGMMPMGGMMPPG-PGIPPL-----MPGMP--PGMPPPVPRPGIPPMTQAQA 226
PG G PPG PG+ +PG+P PG+P P PG
Sbjct: 1176 GPAGQKGEPGQPGFGNPGPPGLPGLSGQKGDGGLPGIPGNPGLPGPKGEPGFHGF----- 1230
Query: 227 VSAPGILNRPPAPTATVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKALF 286
PG+ P P + PA + P P G G P T
Sbjct: 1231 ---PGVQGPPGPPGSPGPALEGPKGNP-----GPQGPPGRPGPTGFQGLPGPEG------ 1276
Query: 287 PSTAQAQAAVQGPVGTDFKP-LNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAA 345
P ++G G +P L P + P Q
Sbjct: 1277 PPGLPGNGGIKGEKGNPGQPGLPGLPGLKGDQGPPGL----QGNPGRPGLNGMKGDPGLP 1332
Query: 346 SITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNLPRP-GQAPIGNPPVGPIGG 404
+ P + S P+ + L P LP P GQ+ I GP
Sbjct: 1333 GVPGFPG-MKGPSGVPGSAGPEGEPGLIG-----PPGPPGLPGPSGQSIIIKGDAGP--- 1383
Query: 405 MMPPQPGIPQQQGMRPPMPPHGQYG----------GHHQGMPGY-----------LPGAM 443
PGIP Q G++ P G G G+PG+ LPG
Sbjct: 1384 -----PGIPGQPGLKGLPGPQGPQGLPGPTGPPGDPGRNGLPGFDGAGGRKGDPGLPGQP 1438
Query: 444 PPYGQGPPMVPPYQGGPPRPP 464
G P P GPP PP
Sbjct: 1439 GTRGLDGPPGPDGLQGPPGPP 1459
Score = 51.6 bits (122), Expect = 2e-06
Identities = 106/394 (26%), Positives = 128/394 (32%), Gaps = 99/394 (25%)
Query: 137 GYIPPMAQPGLPPVPGAPGMP--PGI-----------PPLMPGVPPLMPGMP--PVMPGM 181
G P QPGLP +PG PG PG P +PG+P PG P P G
Sbjct: 488 GISGPPGQPGLPGLPGPPGSLGFPGQKGEKGQAGATGPKGLPGIPGA-PGAPGFPGSKGE 546
Query: 182 PPGMMPMGGMM--------PPGPGIPPLMPGMP-----PGMPPPVPRPGIPPMTQAQAVS 228
P ++ GM P PG+P L PG P PG+P P PG +T
Sbjct: 547 PGDILTFPGMKGDKGELGSPGAPGLPGL-PGTPGQDGLPGLPGPKGEPG--GITFKGERG 603
Query: 229 APGILNRPPAPTATVPA-------PQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLSAS 281
PG P P P P P K + AG G P ++++
Sbjct: 604 PPGNPGLPGLPGNIGPMGPPGFGPPGPVGEKGIQGVAGNPGQPGIPGPKGDPG-QTITQP 662
Query: 282 SKALFPSTA--QAQAAVQGPVGTDFKP-LNSTPATTTEPPKPTFPAYTQSTASTTSTTNS 338
K P + G G +P L P + EP P
Sbjct: 663 GKPGLPGNPGRDGDVGLPGDPGLPGQPGLPGIPGSKGEPGIPGI-----------GLPGP 711
Query: 339 TAAKPAASITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNP- 397
K I P T I LE PG P G P
Sbjct: 712 PGPKGFPGIPGPPGAPGTPGR----------IGLEGP-------------PG--PPGFPG 746
Query: 398 PVGPIGGMMPPQPGIPQQQGMRPPMPPHGQYGGHHQGMPG--------YLPGA---MPPY 446
P G G +P PG P G + + P G G G PG LPG + P
Sbjct: 747 PKGEPGFALPGPPGPPGLPGFKGALGPKGDRG--FPGPPGPPGRTGLDGLPGPKGDVGPN 804
Query: 447 GQGPPMVPP-----YQGGPPRPPMGMRPPVMSQG 475
GQ PM PP GPP PP G+ P+ G
Sbjct: 805 GQPGPMGPPGLPGIGVQGPPGPP-GIPGPIGQPG 837
Score = 51.6 bits (122), Expect = 2e-06
Identities = 48/135 (35%), Positives = 57/135 (42%), Gaps = 30/135 (22%)
Query: 145 PGLPPVPGAPGM--PPGIPPLMPGVPPLMPGM--PPVMPGMP----PGMMPMGGMMPPG- 195
PGLP VPG PGM P G+P P PG+ PP PG+P ++ G PPG
Sbjct: 1329 PGLPGVPGFPGMKGPSGVPG--SAGPEGEPGLIGPPGPPGLPGPSGQSIIIKGDAGPPGI 1386
Query: 196 PGIPPL--MPGM--PPGMPPPVPRPGIPPMTQAQAVSA-------PGI--------LNRP 236
PG P L +PG P G+P P PG P PG+ L+ P
Sbjct: 1387 PGQPGLKGLPGPQGPQGLPGPTGPPGDPGRNGLPGFDGAGGRKGDPGLPGQPGTRGLDGP 1446
Query: 237 PAPTATVPAPQPPVT 251
P P P PP T
Sbjct: 1447 PGPDGLQGPPGPPGT 1461
Score = 36.2 bits (82), Expect = 0.067
Identities = 37/121 (30%), Positives = 45/121 (37%), Gaps = 39/121 (32%)
Query: 384 RNLPRPGQAPIGNPPVGPIGGMMPP-QPGIPQ-----------------QQGMRPPMPPH 425
+ LP P P P GP G M PP PG+P +QG++ P P
Sbjct: 182 QGLPGPTGIPGPIGPPGPPGLMGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGPP 241
Query: 426 GQYGGHH-----------QGMPGYLPGAMPPYGQGPPMVPPYQGGPPRPPMGMRPPVMSQ 474
GQ QG+PG +GPP PP GPP PP G + Q
Sbjct: 242 GQISEQKRPIDVEFQKGDQGLPG---------DRGPPG-PPGIRGPPGPPGGEKGEKGEQ 291
Query: 475 G 475
G
Sbjct: 292 G 292
Score = 35.0 bits (79), Expect = 0.15
Identities = 38/98 (38%), Positives = 40/98 (40%), Gaps = 21/98 (21%)
Query: 387 PRPGQAPIGNPPVGPIGGMMPPQPGIPQQQGMRPPMPP-----HGQYGG-------HHQG 434
P P P N G G P PG P QG PP PP G+ G +G
Sbjct: 116 PGPQGIPGCNGTKGERG--FPGSPGFPGLQG--PPGPPGIPGMKGEPGSIIMSSLPGPKG 171
Query: 435 MPGYLPGAMPPYGQGPPMVPPYQG--GPPRPPMGMRPP 470
PGY PG PP QG P G GPP PP M PP
Sbjct: 172 NPGY-PG--PPGIQGLPGPTGIPGPIGPPGPPGLMGPP 206
Score = 33.9 bits (76), Expect = 0.33
Identities = 23/56 (41%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Query: 410 PGIPQQQGMRPPMPPHGQYGGHHQGMPGYLPGAMPPYGQGPPMVPPYQGGPPRPPM 465
PG+P G P P GQ G G+PG PG P +GPP +P + G P P M
Sbjct: 59 PGLPGFPGPEGPPGPRGQKG--DDGIPG-PPG--PKGIRGPPGLPGFPGTPGLPGM 109
>gi|4502955 type IV collagen alpha 5 isoform 1 precursor [Homo
sapiens]
Length = 1685
Score = 73.6 bits (179), Expect = 4e-13
Identities = 102/394 (25%), Positives = 129/394 (32%), Gaps = 75/394 (19%)
Query: 129 PQPVQPQQGYIPPMAQPGLPPVPGAPGM--------PPGIP-----------PLMPGVPP 169
P P P+ G P PG P PG PGM P GIP P PG P
Sbjct: 83 PGPPGPK-GIRGPPGLPGFPGTPGLPGMPGHDGAPGPQGIPGCNGTKGERGFPGSPGFPG 141
Query: 170 LM-PGMPPVMPGM--PPGMM-------PMGGMMPPGP----------GIP-PLMPGMPPG 208
L P PP +PGM PG + P G PGP GIP P+ P PPG
Sbjct: 142 LQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNPGYPGPPGIQGLPGPTGIPGPIGPPGPPG 201
Query: 209 MPPPVPRPGIPPMTQAQAVSAPGI--------LNRPPAPTATVPAPQPPVTKPLFPSAGQ 260
+ P PG+P ++ G L PP P + + P+ G
Sbjct: 202 LMGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGPPGQISEQKRPIDVEF--QKGD 259
Query: 261 MGTPVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPVGTDFKP----LNSTPATTTE 316
G P P + + QG G KP N P
Sbjct: 260 QGLPGDRGPPGPPGIRGPPGP-----PGGEKGEKGEQGEPGKRGKPGKDGENGQPGIPGL 314
Query: 317 PPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSATSKLIHPDEDISLEERR 376
P P +P ++ P + +P T T + P ER
Sbjct: 315 PGDPGYPGEPGRDGEKGQKGDTGPPGPPGLVIPRPGTGITIGEKGNIGLPGLPGEKGERG 374
Query: 377 AQLPKYQRNLPRPGQAPIGNPPVGPIGGMMPPQPGIPQQQGMRPPMPPHGQYGGHHQGMP 436
+ LP P A + PP GP PG P ++G + P G G+
Sbjct: 375 FPGIQGPPGLPGPPGAAVMGPP-GP--------PGFPGERGQKGDEGPPGISIPGPPGLD 425
Query: 437 GY--LPGAMPPYGQGPPMVPP----YQGGPPRPP 464
G PG P G P +PP + GPP PP
Sbjct: 426 GQPGAPGLPGPPGPAGPHIPPSDEICEPGPPGPP 459
Score = 73.6 bits (179), Expect = 4e-13
Identities = 105/376 (27%), Positives = 128/376 (34%), Gaps = 83/376 (22%)
Query: 141 PMAQPGLPPVPGAPGMPPGI----PPLMPGVP----------PLMPGMPPVMPGMPPGMM 186
P PG+P PGAPG P I PP PG P P PG PP +PG +
Sbjct: 714 PKGFPGIPGPPGAPGTPGRIGLEGPPGPPGFPGPKGEPGFALPGPPG-PPGLPGFKGALG 772
Query: 187 PMGGMMPPGPGIPPLMPGM--------------------PPGMP------PPVPRPGIP- 219
P G PGP PP G+ PPG+P PP P PGIP
Sbjct: 773 PKGDRGFPGPPGPPGRTGLDGLPGPKGDVGPNGQPGPMGPPGLPGIGVQGPPGP-PGIPG 831
Query: 220 PMTQAQAVSAPGILNRPPAPTATVPAPQPPVTKPLFPSA-GQMGTPVTSSSTASSNSESL 278
P+ Q PG P P VP P P P A G +G P + + +
Sbjct: 832 PIGQPGLHGIPGEKGDPGPPGLDVPGPPGERGSPGIPGAPGPIGPPGSPGLPGKAGASG- 890
Query: 279 SASSKALFPSTAQAQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAY-----TQSTASTT 333
FP T + + + GP G P P + P Q
Sbjct: 891 -------FPGT-KGEMGMMGPPG--------PPGPLGIPGRSGVPGLKGDDGLQGQPGLP 934
Query: 334 STTNSTAAKPAASITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNLP-RPGQA 392
T +K + P + SK + + PK + LP PGQ
Sbjct: 935 GPTGEKGSKGEPGLPGPPGPMDPNLLGSKGEKGEPGLP-GIPGVSGPKGYQGLPGDPGQP 993
Query: 393 PI-GNP----PVGPIGGMMPPQPGIPQQQGMRPPMPPHGQYGGHHQGMPGYLPGAMPPYG 447
+ G P P GP G PG+P Q G+ P G G G PG PP
Sbjct: 994 GLSGQPGLPGPPGPKG-----NPGLPGQPGLIGPPGLKGTIG--DMGFPGPQGVEGPP-- 1044
Query: 448 QGPPMVPPYQGGPPRP 463
GP VP G P P
Sbjct: 1045 -GPSGVPGQPGSPGLP 1059
Score = 72.8 bits (177), Expect = 6e-13
Identities = 107/400 (26%), Positives = 143/400 (35%), Gaps = 76/400 (19%)
Query: 135 QQGYIPPMAQPGLPPVPGAPGMP-----------PGIP-----------PLMPGVP-PLM 171
+ G + P PG +PG G+P PG+P P +PG P P+
Sbjct: 897 EMGMMGPPGPPGPLGIPGRSGVPGLKGDDGLQGQPGLPGPTGEKGSKGEPGLPGPPGPMD 956
Query: 172 PGM--------PPVMPGMPPGMMPMGGMMPPG-PGIPPL--MPGMPPGMPPPVPRPGIPP 220
P + P +PG+P P G PG PG P L PG+ PG P P PG+P
Sbjct: 957 PNLLGSKGEKGEPGLPGIPGVSGPKGYQGLPGDPGQPGLSGQPGL-PGPPGPKGNPGLP- 1014
Query: 221 MTQAQAVSAPGILNRPPAPTATV-----PAPQPPVTKPLFPSA--GQMGTPVTSSSTASS 273
PG++ PP T+ P PQ V P PS GQ G+P
Sbjct: 1015 -------GQPGLIG-PPGLKGTIGDMGFPGPQ-GVEGPPGPSGVPGQPGSPGLPGQKGDK 1065
Query: 274 NSESLSASSKALFPSTA--------QAQAAVQGPVGTDFKP-LNSTPATTTEPPKPTFPA 324
+S+ P ++G VG P L TP +P P FP
Sbjct: 1066 GDPGISSIGLPGLPGPKGEPGLPGYPGNPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFP- 1124
Query: 325 YTQSTASTTSTTNSTAAKPAASITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQR 384
T + + +P + + P E + P Q+
Sbjct: 1125 ---GTPGPPGPKGISGPPGNPGLPGEPGPVGGGGHPGQPGPPGEKGKPGQDGIPGPAGQK 1181
Query: 385 NLPRPGQAPIGNPPVGPIGGMMPPQ-----PGIPQQQGMRPPMPPHGQYG-GHHQGMPGY 438
PGQ GNP + G+ + PGIP G+ P G +G QG PG
Sbjct: 1182 G--EPGQPGFGNPGPPGLPGLSGQKGDGGLPGIPGNPGLPGPKGEPGFHGFPGVQGPPG- 1238
Query: 439 LPGAMPPYGQGPPMVPPYQGGPPRP--PMGMRPPVMSQGG 476
PG+ P +GP P QG P RP P PP + G
Sbjct: 1239 PPGSPGPALEGPKGNPGPQGPPGRPGLPGPEGPPGLPGNG 1278
Score = 65.1 bits (157), Expect = 1e-10
Identities = 105/380 (27%), Positives = 127/380 (33%), Gaps = 83/380 (21%)
Query: 142 MAQPGLPPVPGAPGMP--PGIP--PLMPGVP-PLMPGMPPVMPGMPPGMMPMGGMMPPG- 195
+ PGLP +PG PG PG+P P PG P P PP PG+P P+GG PG
Sbjct: 1100 VGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGISGPPGNPGLPGEPGPVGGGGHPGQ 1159
Query: 196 PGIP--------------------PLMPGM----PPGMP-----------PPVP-RPGIP 219
PG P P PG PPG+P P +P PG+P
Sbjct: 1160 PGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGNPGPPGLPGLSGQKGDGGLPGIPGNPGLP 1219
Query: 220 -PMTQAQAVSAPGILNRPPAPTATVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSESL 278
P + PG+ P P + PA + P P G G P L
Sbjct: 1220 GPKGEPGFHGFPGVQGPPGPPGSPGPALEGPKGNP-----GPQGPPGRPGLPGPEGPPGL 1274
Query: 279 SASSKALFPSTAQAQAAV---------QGPVGTDFKP----LNSTPATTTEPPKPTFPAY 325
+ Q + QGP G P LN P P FP
Sbjct: 1275 PGNGGIKGEKGNPGQPGLPGLPGLKGDQGPPGLQGNPGRPGLNGMKGDPGLPGVPGFPG- 1333
Query: 326 TQSTASTTSTTNSTAAKPAASITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRN 385
S + +P P L S S +I D + L +
Sbjct: 1334 -MKGPSGVPGSAGPEGEPGLIGPPGPPGLPGPSGQSIIIKGDAGPPGIPGQPGL----KG 1388
Query: 386 LPRPGQAPIGNP-PVGPIGGMMPPQPGIPQQQGMRPPMPPHGQYGGHHQGMPGYLPGAMP 444
LP P Q P G P P GP PG P + G+ P G +G PG LPG
Sbjct: 1389 LPGP-QGPQGLPGPTGP--------PGDPGRNGL-----PGFDGAGGRKGDPG-LPGQPG 1433
Query: 445 PYGQGPPMVPPYQGGPPRPP 464
G P P GPP PP
Sbjct: 1434 TRGLDGPPGPDGLQGPPGPP 1453
Score = 62.8 bits (151), Expect = 7e-10
Identities = 103/403 (25%), Positives = 128/403 (31%), Gaps = 87/403 (21%)
Query: 135 QQGYIPPMAQPGLPPVPGAPGMP-----PGIPPLMPGV-----------PPLMPGMPPV- 177
Q G P PG+P PGAPG P PG PG+ P +PG+P
Sbjct: 519 QAGATGPKGLPGIPGAPGAPGFPGSKGEPGDILTFPGMKGDKGELGSPGAPGLPGLPGTP 578
Query: 178 ----MPGMPPGMMPMGGMMPPGPGIPPLMPGMP--PGMPPPVPRPGIPPMTQAQAVSAPG 231
+PG+P GG+ G PP PG+P PG P+ PG P G
Sbjct: 579 GQDGLPGLPGPKGEPGGITFKGERGPPGNPGLPGLPGNIGPMGPPGFGPPGPVGEKGIQG 638
Query: 232 ILNRPPAPTATVPAPQPPVT-----KPLFPS----------------AGQMGTPVTSSST 270
+ P P P P T KP P GQ G P S
Sbjct: 639 VAGNPGQPGIPGPKGDPGQTITQPGKPGLPGNPGRDGDVGLPGDPGLPGQPGLPGIPGSK 698
Query: 271 ASSNSESLSASSKALFPSTAQAQAAVQGPVGTDFKP----LNSTPATTTEPPKPTFPAYT 326
+ P + + GP G P L P P P +
Sbjct: 699 GEPGIPGIGLPG----PPGPKGFPGIPGPPGAPGTPGRIGLEGPPGPPGFPGPKGEPGFA 754
Query: 327 ----QSTASTTSTTNSTAAKPAASITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKY 382
+ K P T L P D+ + P
Sbjct: 755 LPGPPGPPGLPGFKGALGPKGDRGFPGPPGPPGRTGLDG-LPGPKGDVGPNGQPG--PMG 811
Query: 383 QRNLPRPG-QAPIGNPPV-GPIG--GM--MPPQPGIPQQQGMRPPMPPHGQYGGHHQGMP 436
LP G Q P G P + GPIG G+ +P + G P G+ P PP +G P
Sbjct: 812 PPGLPGIGVQGPPGPPGIPGPIGQPGLHGIPGEKGDPGPPGLDVPGPP------GERGSP 865
Query: 437 GYLPGAMPPYG-QGPPMVPPYQG--------------GPPRPP 464
G +PGA P G G P +P G GPP PP
Sbjct: 866 G-IPGAPGPIGPPGSPGLPGKAGASGFPGTKGEMGMMGPPGPP 907
Score = 61.6 bits (148), Expect = 1e-09
Identities = 98/367 (26%), Positives = 127/367 (34%), Gaps = 57/367 (15%)
Query: 136 QGYIPPMAQPGLPPVPGAPGMPPGIPPLMPGVP-----PLMPGMPPVM--PGMPPGMMPM 188
+G + P QPG PG PG+ PP PG+P P + G+P PG PPG+
Sbjct: 798 KGDVGPNGQPGPMGPPGLPGIGVQGPPGPPGIPGPIGQPGLHGIPGEKGDPG-PPGLDVP 856
Query: 189 GGMMPPG----PGIP----PLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPT 240
G PPG PGIP P+ P PG+P G P + P PP P
Sbjct: 857 G---PPGERGSPGIPGAPGPIGPPGSPGLPGKAGASGFPGTKGEMGMMGP---PGPPGPL 910
Query: 241 ATVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKALFPSTAQAQA------ 294
P K GQ G P + S L + P+ ++
Sbjct: 911 GIPGRSGVPGLKGDDGLQGQPGLPGPTGEKGSKGEPGLPGPPGPMDPNLLGSKGEKGEPG 970
Query: 295 -----AVQGPVGTDFKPLN-STPATTTEP--PKPTFPAYTQSTASTTSTTNSTAAKPAAS 346
V GP G P + P + +P P P P K
Sbjct: 971 LPGIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPPGPKGNPGLPGQPGLIGPPGLKGTIG 1030
Query: 347 ITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNPPV-GPIGGM 405
P P + S LP + + PG + IG P + GP G
Sbjct: 1031 DMGFPGPQGVEGPPGPSGVPGQPGS-----PGLPGQKGDKGDPGISSIGLPGLPGPKG-- 1083
Query: 406 MPPQPGIPQQQGMRPPMPPHGQYGGHHQGMPGYLPGAMPPYGQGPPMVPPYQG--GPPRP 463
P PG P G++ G G G+PG LPG P +G P +P + G GPP P
Sbjct: 1084 EPGLPGYPGNPGIK------GSVG--DPGLPG-LPGT--PGAKGQPGLPGFPGTPGPPGP 1132
Query: 464 PMGMRPP 470
PP
Sbjct: 1133 KGISGPP 1139
Score = 61.2 bits (147), Expect = 2e-09
Identities = 105/397 (26%), Positives = 134/397 (33%), Gaps = 77/397 (19%)
Query: 129 PQPVQPQQGYIPPMAQPGLPPVPGAPG--MPPGIPPL-MPGVP-----PLMPGMP----- 175
PQ V+ G QPG P +PG G PGI + +PG+P P +PG P
Sbjct: 1037 PQGVEGPPGPSGVPGQPGSPGLPGQKGDKGDPGISSIGLPGLPGPKGEPGLPGYPGNPGI 1096
Query: 176 ------PVMPGMP--PGMMPMGGMM-------PPGP-GI--PPLMPGMPPGMPPPVPRPG 217
P +PG+P PG G+ PPGP GI PP PG+ PG P PV G
Sbjct: 1097 KGSVGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGISGPPGNPGL-PGEPGPVGGGG 1155
Query: 218 IPPMTQAQAVSAPGILNRPPAPTATVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSES 277
P PG +P +P P +P P G G P +
Sbjct: 1156 HPGQP-----GPPGEKGKPGQD--GIPGPAGQKGEPGQPGFGNPGPPGLPGLSGQKGDGG 1208
Query: 278 LSASSKALFPSTAQAQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTN 337
L + GP G + P P P P
Sbjct: 1209 LPG---------IPGNPGLPGPKGE--PGFHGFPGVQGPPGPPGSPGPALEGPKGNPGPQ 1257
Query: 338 STAAKPAASITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNP 397
+P P L I ++ + LP + + PG GNP
Sbjct: 1258 GPPGRPGLPGPEGPPGLPGNGG----IKGEKGNPGQPGLPGLPGLKGDQGPPGLQ--GNP 1311
Query: 398 PVGPIGGMM--PPQPGIPQQQGMRPPMPPHGQYGGHHQGMPGYL-----PGAMPPYGQ-- 448
+ GM P PG+P GM+ P G G +G PG + PG P GQ
Sbjct: 1312 GRPGLNGMKGDPGLPGVPGFPGMKGPSGVPGSAG--PEGEPGLIGPPGPPGLPGPSGQSI 1369
Query: 449 ------GPPMVPPYQG--GPPRP--PMGMRPPVMSQG 475
GPP +P G G P P P G+ P G
Sbjct: 1370 IIKGDAGPPGIPGQPGLKGLPGPQGPQGLPGPTGPPG 1406
Score = 57.8 bits (138), Expect = 2e-08
Identities = 100/379 (26%), Positives = 130/379 (34%), Gaps = 77/379 (20%)
Query: 135 QQGYIPPMAQPGLPPVPGAPGMP-----------PGIPPLMPGV--PPLMPGMP--PVMP 179
++G+ PGLP PG G P PG PP G+ PP +PG P P +P
Sbjct: 49 ERGFPGLEGHPGLPGFPGPEGPPGPRGQKGDDGIPG-PPGPKGIRGPPGLPGFPGTPGLP 107
Query: 180 GMP-----PGMMPMGGM--------MPPGPGIPPLM-PGMPPGMPPPVPRPGIPPMTQAQ 225
GMP PG + G P PG P L P PPG+P PG M+
Sbjct: 108 GMPGHDGAPGPQGIPGCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSIIMSSLP 167
Query: 226 AVSA-PGILNRP-----PAPTATVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLS 279
PG P P PT +P P P P G MG P + L+
Sbjct: 168 GPKGNPGYPGPPGIQGLPGPTG-IPGPIGPPGPP-----GLMGPPGPPGLPGPKGNMGLN 221
Query: 280 ASSKALFPSTAQAQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNST 339
P + + +QGP G P +E +P + +
Sbjct: 222 FQG----PKGEKGEQGLQGPPG--------PPGQISEQKRPIDVEFQKGDQGLPGDRGPP 269
Query: 340 AAK----PAASITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIG 395
P + K P +D E + +P + PG+ P
Sbjct: 270 GPPGIRGPPGPPGGEKGEKGEQGEPGKRGKPGKD--GENGQPGIPGLPGDPGYPGE-PGR 326
Query: 396 NPPVGPIGGMMPPQPGIPQQQGMRPPMPPHGQYGGH--HQGMPGYLPGAMPPYG----QG 449
+ G G PP P G+ P P G G + G+PG LPG G QG
Sbjct: 327 DGEKGQKGDTGPPGP-----PGLVIPRPGTGITIGEKGNIGLPG-LPGEKGERGFPGIQG 380
Query: 450 PPMVPPYQG----GPPRPP 464
PP +P G GPP PP
Sbjct: 381 PPGLPGPPGAAVMGPPGPP 399
Score = 57.8 bits (138), Expect = 2e-08
Identities = 115/424 (27%), Positives = 141/424 (33%), Gaps = 103/424 (24%)
Query: 135 QQGYIPPMAQPGLPPVPGAPGMPPGIPPLMPGV--------PP--LMPGMPPVMPGMPPG 184
++G+ PGLP PGA M P PP PG PP +PG PP + G P
Sbjct: 372 ERGFPGIQGPPGLPGPPGAAVMGPPGPPGFPGERGQKGDEGPPGISIPG-PPGLDGQPGA 430
Query: 185 MMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSA--------------- 229
G P GP IPP PG P P PG + Q V
Sbjct: 431 PGLPGPPGPAGPHIPPSDEICEPGPPGPPGSPGDKGLQGEQGVKGDKGDTCFNCIGTGIS 490
Query: 230 -----PGILNRPPAP---------------TATVPAPQPPVT----KPLFP-SAGQMGTP 264
PG+ P P AT P P + P FP S G+ G
Sbjct: 491 GPPGQPGLPGLPGPPGSLGFPGQKGEKGQAGATGPKGLPGIPGAPGAPGFPGSKGEPGDI 550
Query: 265 VTSSSTASSNSESLSASSKAL--FPSTAQAQAAVQG-------PVGTDFKPLNSTPATTT 315
+T E S + L P T Q + G P G FK P
Sbjct: 551 LTFPGMKGDKGELGSPGAPGLPGLPGT-PGQDGLPGLPGPKGEPGGITFKGERGPPGNPG 609
Query: 316 EPPKPTF------PAYTQSTASTTSTTNSTAAKPAASITSKP-----ATLTTTSATSKLI 364
P P P + A P P T+T
Sbjct: 610 LPGLPGNIGPMGPPGFGPPGPVGEKGIQGVAGNPGQPGIPGPKGDPGQTITQPGKPGLPG 669
Query: 365 HP--DEDISLE-----ERRAQLPKYQRNLPRPGQAPIGNP-PVGPIG--GM--MPPQPGI 412
+P D D+ L + LP + PG IG P P GP G G+ P PG
Sbjct: 670 NPGRDGDVGLPGDPGLPGQPGLPGIPGSKGEPGIPGIGLPGPPGPKGFPGIPGPPGAPGT 729
Query: 413 PQQQGMRPPMPPHGQYGGHHQGMPGY-LPGAMPPYGQGPPMVPPYQG-----------GP 460
P + G+ P P G G +G PG+ LPG PP GPP +P ++G GP
Sbjct: 730 PGRIGLEGPPGPPGFPG--PKGEPGFALPG--PP---GPPGLPGFKGALGPKGDRGFPGP 782
Query: 461 PRPP 464
P PP
Sbjct: 783 PGPP 786
Score = 51.6 bits (122), Expect = 2e-06
Identities = 106/394 (26%), Positives = 128/394 (32%), Gaps = 99/394 (25%)
Query: 137 GYIPPMAQPGLPPVPGAPGMP--PGI-----------PPLMPGVPPLMPGMP--PVMPGM 181
G P QPGLP +PG PG PG P +PG+P PG P P G
Sbjct: 488 GISGPPGQPGLPGLPGPPGSLGFPGQKGEKGQAGATGPKGLPGIPGA-PGAPGFPGSKGE 546
Query: 182 PPGMMPMGGMM--------PPGPGIPPLMPGMP-----PGMPPPVPRPGIPPMTQAQAVS 228
P ++ GM P PG+P L PG P PG+P P PG +T
Sbjct: 547 PGDILTFPGMKGDKGELGSPGAPGLPGL-PGTPGQDGLPGLPGPKGEPG--GITFKGERG 603
Query: 229 APGILNRPPAPTATVPA-------PQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLSAS 281
PG P P P P P K + AG G P ++++
Sbjct: 604 PPGNPGLPGLPGNIGPMGPPGFGPPGPVGEKGIQGVAGNPGQPGIPGPKGDPG-QTITQP 662
Query: 282 SKALFPSTA--QAQAAVQGPVGTDFKP-LNSTPATTTEPPKPTFPAYTQSTASTTSTTNS 338
K P + G G +P L P + EP P
Sbjct: 663 GKPGLPGNPGRDGDVGLPGDPGLPGQPGLPGIPGSKGEPGIPGI-----------GLPGP 711
Query: 339 TAAKPAASITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNP- 397
K I P T I LE PG P G P
Sbjct: 712 PGPKGFPGIPGPPGAPGTPGR----------IGLEGP-------------PG--PPGFPG 746
Query: 398 PVGPIGGMMPPQPGIPQQQGMRPPMPPHGQYGGHHQGMPG--------YLPGA---MPPY 446
P G G +P PG P G + + P G G G PG LPG + P
Sbjct: 747 PKGEPGFALPGPPGPPGLPGFKGALGPKGDRG--FPGPPGPPGRTGLDGLPGPKGDVGPN 804
Query: 447 GQGPPMVPP-----YQGGPPRPPMGMRPPVMSQG 475
GQ PM PP GPP PP G+ P+ G
Sbjct: 805 GQPGPMGPPGLPGIGVQGPPGPP-GIPGPIGQPG 837
Score = 45.4 bits (106), Expect = 1e-04
Identities = 43/123 (34%), Positives = 52/123 (42%), Gaps = 17/123 (13%)
Query: 137 GYIPPMAQPGLPPVPGAPGM--PPGIPPLMPG--VPPLMPGMPPVMPGMPPGMMPMGGMM 192
G P +PGL PG PG+ P G ++ G PP +PG P + G+P P G
Sbjct: 1342 GSAGPEGEPGLIGPPGPPGLPGPSGQSIIIKGDAGPPGIPGQPG-LKGLPG---PQGPQG 1397
Query: 193 PPGPGIPPLMPGMP--PGMPPPVPRPGIPPMTQAQAVSAPGI--LNRPPAPTATVPAPQP 248
PGP PP PG PG R G P + PG L+ PP P P P
Sbjct: 1398 LPGPTGPPGDPGRNGLPGFDGAGGRKGDPGLP-----GQPGTRGLDGPPGPDGLQGPPGP 1452
Query: 249 PVT 251
P T
Sbjct: 1453 PGT 1455
Score = 36.2 bits (82), Expect = 0.067
Identities = 37/121 (30%), Positives = 45/121 (37%), Gaps = 39/121 (32%)
Query: 384 RNLPRPGQAPIGNPPVGPIGGMMPP-QPGIPQ-----------------QQGMRPPMPPH 425
+ LP P P P GP G M PP PG+P +QG++ P P
Sbjct: 182 QGLPGPTGIPGPIGPPGPPGLMGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGPP 241
Query: 426 GQYGGHH-----------QGMPGYLPGAMPPYGQGPPMVPPYQGGPPRPPMGMRPPVMSQ 474
GQ QG+PG +GPP PP GPP PP G + Q
Sbjct: 242 GQISEQKRPIDVEFQKGDQGLPG---------DRGPPG-PPGIRGPPGPPGGEKGEKGEQ 291
Query: 475 G 475
G
Sbjct: 292 G 292
Score = 35.0 bits (79), Expect = 0.15
Identities = 38/98 (38%), Positives = 40/98 (40%), Gaps = 21/98 (21%)
Query: 387 PRPGQAPIGNPPVGPIGGMMPPQPGIPQQQGMRPPMPP-----HGQYGG-------HHQG 434
P P P N G G P PG P QG PP PP G+ G +G
Sbjct: 116 PGPQGIPGCNGTKGERG--FPGSPGFPGLQG--PPGPPGIPGMKGEPGSIIMSSLPGPKG 171
Query: 435 MPGYLPGAMPPYGQGPPMVPPYQG--GPPRPPMGMRPP 470
PGY PG PP QG P G GPP PP M PP
Sbjct: 172 NPGY-PG--PPGIQGLPGPTGIPGPIGPPGPPGLMGPP 206
Score = 33.9 bits (76), Expect = 0.33
Identities = 23/56 (41%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Query: 410 PGIPQQQGMRPPMPPHGQYGGHHQGMPGYLPGAMPPYGQGPPMVPPYQGGPPRPPM 465
PG+P G P P GQ G G+PG PG P +GPP +P + G P P M
Sbjct: 59 PGLPGFPGPEGPPGPRGQKG--DDGIPG-PPG--PKGIRGPPGLPGFPGTPGLPGM 109
>gi|15890088 type IV collagen alpha 5 isoform 3 precursor [Homo
sapiens]
Length = 1688
Score = 73.6 bits (179), Expect = 4e-13
Identities = 102/394 (25%), Positives = 129/394 (32%), Gaps = 75/394 (19%)
Query: 129 PQPVQPQQGYIPPMAQPGLPPVPGAPGM--------PPGIP-----------PLMPGVPP 169
P P P+ G P PG P PG PGM P GIP P PG P
Sbjct: 83 PGPPGPK-GIRGPPGLPGFPGTPGLPGMPGHDGAPGPQGIPGCNGTKGERGFPGSPGFPG 141
Query: 170 LM-PGMPPVMPGM--PPGMM-------PMGGMMPPGP----------GIP-PLMPGMPPG 208
L P PP +PGM PG + P G PGP GIP P+ P PPG
Sbjct: 142 LQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNPGYPGPPGIQGLPGPTGIPGPIGPPGPPG 201
Query: 209 MPPPVPRPGIPPMTQAQAVSAPGI--------LNRPPAPTATVPAPQPPVTKPLFPSAGQ 260
+ P PG+P ++ G L PP P + + P+ G
Sbjct: 202 LMGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGPPGQISEQKRPIDVEF--QKGD 259
Query: 261 MGTPVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPVGTDFKP----LNSTPATTTE 316
G P P + + QG G KP N P
Sbjct: 260 QGLPGDRGPPGPPGIRGPPGP-----PGGEKGEKGEQGEPGKRGKPGKDGENGQPGIPGL 314
Query: 317 PPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSATSKLIHPDEDISLEERR 376
P P +P ++ P + +P T T + P ER
Sbjct: 315 PGDPGYPGEPGRDGEKGQKGDTGPPGPPGLVIPRPGTGITIGEKGNIGLPGLPGEKGERG 374
Query: 377 AQLPKYQRNLPRPGQAPIGNPPVGPIGGMMPPQPGIPQQQGMRPPMPPHGQYGGHHQGMP 436
+ LP P A + PP GP PG P ++G + P G G+
Sbjct: 375 FPGIQGPPGLPGPPGAAVMGPP-GP--------PGFPGERGQKGDEGPPGISIPGPPGLD 425
Query: 437 GY--LPGAMPPYGQGPPMVPP----YQGGPPRPP 464
G PG P G P +PP + GPP PP
Sbjct: 426 GQPGAPGLPGPPGPAGPHIPPSDEICEPGPPGPP 459
Score = 73.6 bits (179), Expect = 4e-13
Identities = 105/376 (27%), Positives = 128/376 (34%), Gaps = 83/376 (22%)
Query: 141 PMAQPGLPPVPGAPGMPPGI----PPLMPGVP----------PLMPGMPPVMPGMPPGMM 186
P PG+P PGAPG P I PP PG P P PG PP +PG +
Sbjct: 714 PKGFPGIPGPPGAPGTPGRIGLEGPPGPPGFPGPKGEPGFALPGPPG-PPGLPGFKGALG 772
Query: 187 PMGGMMPPGPGIPPLMPGM--------------------PPGMP------PPVPRPGIP- 219
P G PGP PP G+ PPG+P PP P PGIP
Sbjct: 773 PKGDRGFPGPPGPPGRTGLDGLPGPKGDVGPNGQPGPMGPPGLPGIGVQGPPGP-PGIPG 831
Query: 220 PMTQAQAVSAPGILNRPPAPTATVPAPQPPVTKPLFPSA-GQMGTPVTSSSTASSNSESL 278
P+ Q PG P P VP P P P A G +G P + + +
Sbjct: 832 PIGQPGLHGIPGEKGDPGPPGLDVPGPPGERGSPGIPGAPGPIGPPGSPGLPGKAGASG- 890
Query: 279 SASSKALFPSTAQAQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAY-----TQSTASTT 333
FP T + + + GP G P P + P Q
Sbjct: 891 -------FPGT-KGEMGMMGPPG--------PPGPLGIPGRSGVPGLKGDDGLQGQPGLP 934
Query: 334 STTNSTAAKPAASITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNLP-RPGQA 392
T +K + P + SK + + PK + LP PGQ
Sbjct: 935 GPTGEKGSKGEPGLPGPPGPMDPNLLGSKGEKGEPGLP-GIPGVSGPKGYQGLPGDPGQP 993
Query: 393 PI-GNP----PVGPIGGMMPPQPGIPQQQGMRPPMPPHGQYGGHHQGMPGYLPGAMPPYG 447
+ G P P GP G PG+P Q G+ P G G G PG PP
Sbjct: 994 GLSGQPGLPGPPGPKG-----NPGLPGQPGLIGPPGLKGTIG--DMGFPGPQGVEGPP-- 1044
Query: 448 QGPPMVPPYQGGPPRP 463
GP VP G P P
Sbjct: 1045 -GPSGVPGQPGSPGLP 1059
Score = 72.4 bits (176), Expect = 8e-13
Identities = 103/385 (26%), Positives = 138/385 (35%), Gaps = 74/385 (19%)
Query: 135 QQGYIPPMAQPGLPPVPGAPGMP-----------PGIP-----------PLMPGVP-PLM 171
+ G + P PG +PG G+P PG+P P +PG P P+
Sbjct: 897 EMGMMGPPGPPGPLGIPGRSGVPGLKGDDGLQGQPGLPGPTGEKGSKGEPGLPGPPGPMD 956
Query: 172 PGM--------PPVMPGMPPGMMPMGGMMPPG-PGIPPL--MPGMPPGMPPPVPRPGIPP 220
P + P +PG+P P G PG PG P L PG+ PG P P PG+P
Sbjct: 957 PNLLGSKGEKGEPGLPGIPGVSGPKGYQGLPGDPGQPGLSGQPGL-PGPPGPKGNPGLP- 1014
Query: 221 MTQAQAVSAPGILNRPPAPTATV-----PAPQPPVTKPLFPSA--GQMGTPVTSSSTASS 273
PG++ PP T+ P PQ V P PS GQ G+P
Sbjct: 1015 -------GQPGLIG-PPGLKGTIGDMGFPGPQ-GVEGPPGPSGVPGQPGSPGLPGQKGDK 1065
Query: 274 NSESLSASSKALFPSTA--------QAQAAVQGPVGTDFKP-LNSTPATTTEPPKPTFPA 324
+S+ P ++G VG P L TP +P P FP
Sbjct: 1066 GDPGISSIGLPGLPGPKGEPGLPGYPGNPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFP- 1124
Query: 325 YTQSTASTTSTTNSTAAKPAASITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQR 384
T + + +P + + P E + P Q+
Sbjct: 1125 ---GTPGPPGPKGISGPPGNPGLPGEPGPVGGGGHPGQPGPPGEKGKPGQDGIPGPAGQK 1181
Query: 385 NLPRPGQAPIGNPPVGPIGGMMPPQ-----PGIPQQQGMRPPMPPHGQYG-GHHQGMPGY 438
PGQ GNP + G+ + PGIP G+ P G +G QG PG
Sbjct: 1182 G--EPGQPGFGNPGPPGLPGLSGQKGDGGLPGIPGNPGLPGPKGEPGFHGFPGVQGPPG- 1238
Query: 439 LPGAMPPYGQGPPMVPPYQGGPPRP 463
PG+ P +GP P QG P RP
Sbjct: 1239 PPGSPGPALEGPKGNPGPQGPPGRP 1263
Score = 64.7 bits (156), Expect = 2e-10
Identities = 107/380 (28%), Positives = 129/380 (33%), Gaps = 80/380 (21%)
Query: 142 MAQPGLPPVPGAPGMP--PGIP--PLMPGVP-PLMPGMPPVMPGMPPGMMPMGGMMPPG- 195
+ PGLP +PG PG PG+P P PG P P PP PG+P P+GG PG
Sbjct: 1100 VGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGISGPPGNPGLPGEPGPVGGGGHPGQ 1159
Query: 196 PGIP--------------------PLMPGM----PPGMP-----------PPVP-RPGIP 219
PG P P PG PPG+P P +P PG+P
Sbjct: 1160 PGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGNPGPPGLPGLSGQKGDGGLPGIPGNPGLP 1219
Query: 220 -PMTQAQAVSAPGILNRPPAPTATVPA---------PQPPVTKPLFPSAGQMGTPVTSSS 269
P + PG+ P P + PA PQ P +P F P
Sbjct: 1220 GPKGEPGFHGFPGVQGPPGPPGSPGPALEGPKGNPGPQGPPGRPGFQGLPGPEGPPGLPG 1279
Query: 270 TASSNSESLSASSKALFPSTAQAQAAVQGPVGTDFKP----LNSTPATTTEPPKPTFPAY 325
E + L P + QGP G P LN P P FP
Sbjct: 1280 NGGIKGEKGNPGQPGL-PGLPGLKGD-QGPPGLQGNPGRPGLNGMKGDPGLPGVPGFPG- 1336
Query: 326 TQSTASTTSTTNSTAAKPAASITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRN 385
S + +P P L S S +I D + L +
Sbjct: 1337 -MKGPSGVPGSAGPEGEPGLIGPPGPPGLPGPSGQSIIIKGDAGPPGIPGQPGL----KG 1391
Query: 386 LPRPGQAPIGNP-PVGPIGGMMPPQPGIPQQQGMRPPMPPHGQYGGHHQGMPGYLPGAMP 444
LP P Q P G P P GP PG P + G+ P G +G PG LPG
Sbjct: 1392 LPGP-QGPQGLPGPTGP--------PGDPGRNGL-----PGFDGAGGRKGDPG-LPGQPG 1436
Query: 445 PYGQGPPMVPPYQGGPPRPP 464
G P P GPP PP
Sbjct: 1437 TRGLDGPPGPDGLQGPPGPP 1456
Score = 62.8 bits (151), Expect = 7e-10
Identities = 103/403 (25%), Positives = 128/403 (31%), Gaps = 87/403 (21%)
Query: 135 QQGYIPPMAQPGLPPVPGAPGMP-----PGIPPLMPGV-----------PPLMPGMPPV- 177
Q G P PG+P PGAPG P PG PG+ P +PG+P
Sbjct: 519 QAGATGPKGLPGIPGAPGAPGFPGSKGEPGDILTFPGMKGDKGELGSPGAPGLPGLPGTP 578
Query: 178 ----MPGMPPGMMPMGGMMPPGPGIPPLMPGMP--PGMPPPVPRPGIPPMTQAQAVSAPG 231
+PG+P GG+ G PP PG+P PG P+ PG P G
Sbjct: 579 GQDGLPGLPGPKGEPGGITFKGERGPPGNPGLPGLPGNIGPMGPPGFGPPGPVGEKGIQG 638
Query: 232 ILNRPPAPTATVPAPQPPVT-----KPLFPS----------------AGQMGTPVTSSST 270
+ P P P P T KP P GQ G P S
Sbjct: 639 VAGNPGQPGIPGPKGDPGQTITQPGKPGLPGNPGRDGDVGLPGDPGLPGQPGLPGIPGSK 698
Query: 271 ASSNSESLSASSKALFPSTAQAQAAVQGPVGTDFKP----LNSTPATTTEPPKPTFPAYT 326
+ P + + GP G P L P P P +
Sbjct: 699 GEPGIPGIGLPG----PPGPKGFPGIPGPPGAPGTPGRIGLEGPPGPPGFPGPKGEPGFA 754
Query: 327 ----QSTASTTSTTNSTAAKPAASITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKY 382
+ K P T L P D+ + P
Sbjct: 755 LPGPPGPPGLPGFKGALGPKGDRGFPGPPGPPGRTGLDG-LPGPKGDVGPNGQPG--PMG 811
Query: 383 QRNLPRPG-QAPIGNPPV-GPIG--GM--MPPQPGIPQQQGMRPPMPPHGQYGGHHQGMP 436
LP G Q P G P + GPIG G+ +P + G P G+ P PP +G P
Sbjct: 812 PPGLPGIGVQGPPGPPGIPGPIGQPGLHGIPGEKGDPGPPGLDVPGPP------GERGSP 865
Query: 437 GYLPGAMPPYG-QGPPMVPPYQG--------------GPPRPP 464
G +PGA P G G P +P G GPP PP
Sbjct: 866 G-IPGAPGPIGPPGSPGLPGKAGASGFPGTKGEMGMMGPPGPP 907
Score = 61.6 bits (148), Expect = 1e-09
Identities = 98/367 (26%), Positives = 127/367 (34%), Gaps = 57/367 (15%)
Query: 136 QGYIPPMAQPGLPPVPGAPGMPPGIPPLMPGVP-----PLMPGMPPVM--PGMPPGMMPM 188
+G + P QPG PG PG+ PP PG+P P + G+P PG PPG+
Sbjct: 798 KGDVGPNGQPGPMGPPGLPGIGVQGPPGPPGIPGPIGQPGLHGIPGEKGDPG-PPGLDVP 856
Query: 189 GGMMPPG----PGIP----PLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPT 240
G PPG PGIP P+ P PG+P G P + P PP P
Sbjct: 857 G---PPGERGSPGIPGAPGPIGPPGSPGLPGKAGASGFPGTKGEMGMMGP---PGPPGPL 910
Query: 241 ATVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKALFPSTAQAQA------ 294
P K GQ G P + S L + P+ ++
Sbjct: 911 GIPGRSGVPGLKGDDGLQGQPGLPGPTGEKGSKGEPGLPGPPGPMDPNLLGSKGEKGEPG 970
Query: 295 -----AVQGPVGTDFKPLN-STPATTTEP--PKPTFPAYTQSTASTTSTTNSTAAKPAAS 346
V GP G P + P + +P P P P K
Sbjct: 971 LPGIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPPGPKGNPGLPGQPGLIGPPGLKGTIG 1030
Query: 347 ITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNPPV-GPIGGM 405
P P + S LP + + PG + IG P + GP G
Sbjct: 1031 DMGFPGPQGVEGPPGPSGVPGQPGS-----PGLPGQKGDKGDPGISSIGLPGLPGPKG-- 1083
Query: 406 MPPQPGIPQQQGMRPPMPPHGQYGGHHQGMPGYLPGAMPPYGQGPPMVPPYQG--GPPRP 463
P PG P G++ G G G+PG LPG P +G P +P + G GPP P
Sbjct: 1084 EPGLPGYPGNPGIK------GSVG--DPGLPG-LPGT--PGAKGQPGLPGFPGTPGPPGP 1132
Query: 464 PMGMRPP 470
PP
Sbjct: 1133 KGISGPP 1139
Score = 57.8 bits (138), Expect = 2e-08
Identities = 100/379 (26%), Positives = 130/379 (34%), Gaps = 77/379 (20%)
Query: 135 QQGYIPPMAQPGLPPVPGAPGMP-----------PGIPPLMPGV--PPLMPGMP--PVMP 179
++G+ PGLP PG G P PG PP G+ PP +PG P P +P
Sbjct: 49 ERGFPGLEGHPGLPGFPGPEGPPGPRGQKGDDGIPG-PPGPKGIRGPPGLPGFPGTPGLP 107
Query: 180 GMP-----PGMMPMGGM--------MPPGPGIPPLM-PGMPPGMPPPVPRPGIPPMTQAQ 225
GMP PG + G P PG P L P PPG+P PG M+
Sbjct: 108 GMPGHDGAPGPQGIPGCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSIIMSSLP 167
Query: 226 AVSA-PGILNRP-----PAPTATVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLS 279
PG P P PT +P P P P G MG P + L+
Sbjct: 168 GPKGNPGYPGPPGIQGLPGPTG-IPGPIGPPGPP-----GLMGPPGPPGLPGPKGNMGLN 221
Query: 280 ASSKALFPSTAQAQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNST 339
P + + +QGP G P +E +P + +
Sbjct: 222 FQG----PKGEKGEQGLQGPPG--------PPGQISEQKRPIDVEFQKGDQGLPGDRGPP 269
Query: 340 AAK----PAASITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIG 395
P + K P +D E + +P + PG+ P
Sbjct: 270 GPPGIRGPPGPPGGEKGEKGEQGEPGKRGKPGKD--GENGQPGIPGLPGDPGYPGE-PGR 326
Query: 396 NPPVGPIGGMMPPQPGIPQQQGMRPPMPPHGQYGGH--HQGMPGYLPGAMPPYG----QG 449
+ G G PP P G+ P P G G + G+PG LPG G QG
Sbjct: 327 DGEKGQKGDTGPPGP-----PGLVIPRPGTGITIGEKGNIGLPG-LPGEKGERGFPGIQG 380
Query: 450 PPMVPPYQG----GPPRPP 464
PP +P G GPP PP
Sbjct: 381 PPGLPGPPGAAVMGPPGPP 399
Score = 57.8 bits (138), Expect = 2e-08
Identities = 115/424 (27%), Positives = 141/424 (33%), Gaps = 103/424 (24%)
Query: 135 QQGYIPPMAQPGLPPVPGAPGMPPGIPPLMPGV--------PP--LMPGMPPVMPGMPPG 184
++G+ PGLP PGA M P PP PG PP +PG PP + G P
Sbjct: 372 ERGFPGIQGPPGLPGPPGAAVMGPPGPPGFPGERGQKGDEGPPGISIPG-PPGLDGQPGA 430
Query: 185 MMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSA--------------- 229
G P GP IPP PG P P PG + Q V
Sbjct: 431 PGLPGPPGPAGPHIPPSDEICEPGPPGPPGSPGDKGLQGEQGVKGDKGDTCFNCIGTGIS 490
Query: 230 -----PGILNRPPAP---------------TATVPAPQPPVT----KPLFP-SAGQMGTP 264
PG+ P P AT P P + P FP S G+ G
Sbjct: 491 GPPGQPGLPGLPGPPGSLGFPGQKGEKGQAGATGPKGLPGIPGAPGAPGFPGSKGEPGDI 550
Query: 265 VTSSSTASSNSESLSASSKAL--FPSTAQAQAAVQG-------PVGTDFKPLNSTPATTT 315
+T E S + L P T Q + G P G FK P
Sbjct: 551 LTFPGMKGDKGELGSPGAPGLPGLPGT-PGQDGLPGLPGPKGEPGGITFKGERGPPGNPG 609
Query: 316 EPPKPTF------PAYTQSTASTTSTTNSTAAKPAASITSKP-----ATLTTTSATSKLI 364
P P P + A P P T+T
Sbjct: 610 LPGLPGNIGPMGPPGFGPPGPVGEKGIQGVAGNPGQPGIPGPKGDPGQTITQPGKPGLPG 669
Query: 365 HP--DEDISLE-----ERRAQLPKYQRNLPRPGQAPIGNP-PVGPIG--GM--MPPQPGI 412
+P D D+ L + LP + PG IG P P GP G G+ P PG
Sbjct: 670 NPGRDGDVGLPGDPGLPGQPGLPGIPGSKGEPGIPGIGLPGPPGPKGFPGIPGPPGAPGT 729
Query: 413 PQQQGMRPPMPPHGQYGGHHQGMPGY-LPGAMPPYGQGPPMVPPYQG-----------GP 460
P + G+ P P G G +G PG+ LPG PP GPP +P ++G GP
Sbjct: 730 PGRIGLEGPPGPPGFPG--PKGEPGFALPG--PP---GPPGLPGFKGALGPKGDRGFPGP 782
Query: 461 PRPP 464
P PP
Sbjct: 783 PGPP 786
Score = 57.8 bits (138), Expect = 2e-08
Identities = 104/397 (26%), Positives = 133/397 (33%), Gaps = 74/397 (18%)
Query: 129 PQPVQPQQGYIPPMAQPGLPPVPGAPG--MPPGIPPL-MPGVP-----PLMPGMP----- 175
PQ V+ G QPG P +PG G PGI + +PG+P P +PG P
Sbjct: 1037 PQGVEGPPGPSGVPGQPGSPGLPGQKGDKGDPGISSIGLPGLPGPKGEPGLPGYPGNPGI 1096
Query: 176 ------PVMPGMP--PGMMPMGGMM-------PPGP-GI--PPLMPGMPPGMPPPVPRPG 217
P +PG+P PG G+ PPGP GI PP PG+ PG P PV G
Sbjct: 1097 KGSVGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGISGPPGNPGL-PGEPGPVGGGG 1155
Query: 218 IPPMTQAQAVSAPGILNRPPAPTATVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSES 277
P PG +P +P P +P P G G P +
Sbjct: 1156 HPGQP-----GPPGEKGKPGQD--GIPGPAGQKGEPGQPGFGNPGPPGLPGLSGQKGDGG 1208
Query: 278 LSASSKALFPSTAQAQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTN 337
L + GP G + P P P P
Sbjct: 1209 LPG---------IPGNPGLPGPKGE--PGFHGFPGVQGPPGPPGSPGPALEGPKGNPGPQ 1257
Query: 338 STAAKPAASITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNP 397
+P P I ++ + LP + + PG GNP
Sbjct: 1258 GPPGRPGFQGLPGPEGPPGLPGNGG-IKGEKGNPGQPGLPGLPGLKGDQGPPGLQ--GNP 1314
Query: 398 PVGPIGGMM--PPQPGIPQQQGMRPPMPPHGQYGGHHQGMPGYL-----PGAMPPYGQ-- 448
+ GM P PG+P GM+ P G G +G PG + PG P GQ
Sbjct: 1315 GRPGLNGMKGDPGLPGVPGFPGMKGPSGVPGSAG--PEGEPGLIGPPGPPGLPGPSGQSI 1372
Query: 449 ------GPPMVPPYQG--GPPRP--PMGMRPPVMSQG 475
GPP +P G G P P P G+ P G
Sbjct: 1373 IIKGDAGPPGIPGQPGLKGLPGPQGPQGLPGPTGPPG 1409
Score = 51.6 bits (122), Expect = 2e-06
Identities = 106/394 (26%), Positives = 128/394 (32%), Gaps = 99/394 (25%)
Query: 137 GYIPPMAQPGLPPVPGAPGMP--PGI-----------PPLMPGVPPLMPGMP--PVMPGM 181
G P QPGLP +PG PG PG P +PG+P PG P P G
Sbjct: 488 GISGPPGQPGLPGLPGPPGSLGFPGQKGEKGQAGATGPKGLPGIPGA-PGAPGFPGSKGE 546
Query: 182 PPGMMPMGGMM--------PPGPGIPPLMPGMP-----PGMPPPVPRPGIPPMTQAQAVS 228
P ++ GM P PG+P L PG P PG+P P PG +T
Sbjct: 547 PGDILTFPGMKGDKGELGSPGAPGLPGL-PGTPGQDGLPGLPGPKGEPG--GITFKGERG 603
Query: 229 APGILNRPPAPTATVPA-------PQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLSAS 281
PG P P P P P K + AG G P ++++
Sbjct: 604 PPGNPGLPGLPGNIGPMGPPGFGPPGPVGEKGIQGVAGNPGQPGIPGPKGDPG-QTITQP 662
Query: 282 SKALFPSTA--QAQAAVQGPVGTDFKP-LNSTPATTTEPPKPTFPAYTQSTASTTSTTNS 338
K P + G G +P L P + EP P
Sbjct: 663 GKPGLPGNPGRDGDVGLPGDPGLPGQPGLPGIPGSKGEPGIPGI-----------GLPGP 711
Query: 339 TAAKPAASITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNP- 397
K I P T I LE PG P G P
Sbjct: 712 PGPKGFPGIPGPPGAPGTPGR----------IGLEGP-------------PG--PPGFPG 746
Query: 398 PVGPIGGMMPPQPGIPQQQGMRPPMPPHGQYGGHHQGMPG--------YLPGA---MPPY 446
P G G +P PG P G + + P G G G PG LPG + P
Sbjct: 747 PKGEPGFALPGPPGPPGLPGFKGALGPKGDRG--FPGPPGPPGRTGLDGLPGPKGDVGPN 804
Query: 447 GQGPPMVPP-----YQGGPPRPPMGMRPPVMSQG 475
GQ PM PP GPP PP G+ P+ G
Sbjct: 805 GQPGPMGPPGLPGIGVQGPPGPP-GIPGPIGQPG 837
Score = 45.4 bits (106), Expect = 1e-04
Identities = 43/123 (34%), Positives = 52/123 (42%), Gaps = 17/123 (13%)
Query: 137 GYIPPMAQPGLPPVPGAPGM--PPGIPPLMPG--VPPLMPGMPPVMPGMPPGMMPMGGMM 192
G P +PGL PG PG+ P G ++ G PP +PG P + G+P P G
Sbjct: 1345 GSAGPEGEPGLIGPPGPPGLPGPSGQSIIIKGDAGPPGIPGQPG-LKGLPG---PQGPQG 1400
Query: 193 PPGPGIPPLMPGMP--PGMPPPVPRPGIPPMTQAQAVSAPGI--LNRPPAPTATVPAPQP 248
PGP PP PG PG R G P + PG L+ PP P P P
Sbjct: 1401 LPGPTGPPGDPGRNGLPGFDGAGGRKGDPGLP-----GQPGTRGLDGPPGPDGLQGPPGP 1455
Query: 249 PVT 251
P T
Sbjct: 1456 PGT 1458
Score = 36.2 bits (82), Expect = 0.067
Identities = 37/121 (30%), Positives = 45/121 (37%), Gaps = 39/121 (32%)
Query: 384 RNLPRPGQAPIGNPPVGPIGGMMPP-QPGIPQ-----------------QQGMRPPMPPH 425
+ LP P P P GP G M PP PG+P +QG++ P P
Sbjct: 182 QGLPGPTGIPGPIGPPGPPGLMGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGPP 241
Query: 426 GQYGGHH-----------QGMPGYLPGAMPPYGQGPPMVPPYQGGPPRPPMGMRPPVMSQ 474
GQ QG+PG +GPP PP GPP PP G + Q
Sbjct: 242 GQISEQKRPIDVEFQKGDQGLPG---------DRGPPG-PPGIRGPPGPPGGEKGEKGEQ 291
Query: 475 G 475
G
Sbjct: 292 G 292
Score = 35.0 bits (79), Expect = 0.15
Identities = 38/98 (38%), Positives = 40/98 (40%), Gaps = 21/98 (21%)
Query: 387 PRPGQAPIGNPPVGPIGGMMPPQPGIPQQQGMRPPMPP-----HGQYGG-------HHQG 434
P P P N G G P PG P QG PP PP G+ G +G
Sbjct: 116 PGPQGIPGCNGTKGERG--FPGSPGFPGLQG--PPGPPGIPGMKGEPGSIIMSSLPGPKG 171
Query: 435 MPGYLPGAMPPYGQGPPMVPPYQG--GPPRPPMGMRPP 470
PGY PG PP QG P G GPP PP M PP
Sbjct: 172 NPGY-PG--PPGIQGLPGPTGIPGPIGPPGPPGLMGPP 206
Score = 33.9 bits (76), Expect = 0.33
Identities = 23/56 (41%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Query: 410 PGIPQQQGMRPPMPPHGQYGGHHQGMPGYLPGAMPPYGQGPPMVPPYQGGPPRPPM 465
PG+P G P P GQ G G+PG PG P +GPP +P + G P P M
Sbjct: 59 PGLPGFPGPEGPPGPRGQKG--DDGIPG-PPG--PKGIRGPPGLPGFPGTPGLPGM 109
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.134 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,559,074
Number of Sequences: 37866
Number of extensions: 2390067
Number of successful extensions: 54794
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 801
Number of HSP's successfully gapped in prelim test: 2086
Number of HSP's that attempted gapping in prelim test: 14915
Number of HSP's gapped (non-prelim): 17824
length of query: 478
length of database: 18,247,518
effective HSP length: 106
effective length of query: 372
effective length of database: 14,233,722
effective search space: 5294944584
effective search space used: 5294944584
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.