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Search of human proteins with 4507947
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4507947 tyrosyl-tRNA synthetase [Homo sapiens]
(528 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4507947 tyrosyl-tRNA synthetase [Homo sapiens] 1051 0.0
gi|215490011 small inducible cytokine subfamily E, member 1 isof... 170 3e-42
gi|215490009 small inducible cytokine subfamily E, member 1 isof... 170 3e-42
gi|45006986 small inducible cytokine subfamily E, member 1 isofo... 170 3e-42
gi|47419920 tryptophanyl-tRNA synthetase isoform b [Homo sapiens] 39 0.012
gi|47419918 tryptophanyl-tRNA synthetase isoform b [Homo sapiens] 39 0.012
gi|47419916 tryptophanyl-tRNA synthetase isoform a [Homo sapiens] 39 0.012
gi|47419914 tryptophanyl-tRNA synthetase isoform a [Homo sapiens] 39 0.012
gi|191251777 breast carcinoma amplified sequence 1 [Homo sapiens] 36 0.099
gi|110349719 titin isoform N2-A [Homo sapiens] 35 0.17
gi|157266317 ataxia telangiectasia and Rad3 related protein [Hom... 33 0.49
gi|169218238 PREDICTED: similar to ataxia telangiectasia and Rad... 33 0.49
gi|46255064 synaptotagmin-like 2 isoform d [Homo sapiens] 32 1.1
gi|46255062 synaptotagmin-like 2 isoform c [Homo sapiens] 32 1.1
gi|19913414 adaptor-related protein complex 2, alpha 1 subunit i... 32 1.1
gi|19913416 adaptor-related protein complex 2, alpha 1 subunit i... 32 1.1
gi|21361176 aldehyde dehydrogenase 1A1 [Homo sapiens] 32 1.4
gi|192449449 ubiquitin-conjugating enzyme E2O [Homo sapiens] 31 3.2
gi|144953876 signal-regulatory protein beta 1 isoform 1 precurso... 30 4.2
gi|144953878 signal-regulatory protein beta 1 isoform 2 precurso... 30 4.2
gi|209529703 signal-regulatory protein beta 1 isoform 3 precurso... 30 5.4
gi|7661990 mastermind-like 1 [Homo sapiens] 30 5.4
gi|239755097 PREDICTED: hypothetical protein XP_002346214 [Homo ... 30 7.1
gi|239749610 PREDICTED: hypothetical protein XP_002347102 [Homo ... 30 7.1
gi|87299628 biorientation of chromosomes in cell division 1-like... 29 9.3
gi|31563383 serum/glucocorticoid regulated kinase 3 isoform 2 [H... 29 9.3
gi|31563382 serum/glucocorticoid regulated kinase 3 isoform 1 [H... 29 9.3
gi|75813626 serum/glucocorticoid regulated kinase 3 isoform 1 [H... 29 9.3
gi|14717401 protocadherin alpha subfamily C, 1 isoform 1 precurs... 29 9.3
gi|14717403 protocadherin alpha subfamily C, 1 isoform 2 precurs... 29 9.3
>gi|4507947 tyrosyl-tRNA synthetase [Homo sapiens]
Length = 528
Score = 1051 bits (2719), Expect = 0.0
Identities = 528/528 (100%), Positives = 528/528 (100%)
Query: 1 MGDAPSPEEKLHLITRNLQEVLGEEKLKEILKERELKIYWGTATTGKPHVAYFVPMSKIA 60
MGDAPSPEEKLHLITRNLQEVLGEEKLKEILKERELKIYWGTATTGKPHVAYFVPMSKIA
Sbjct: 1 MGDAPSPEEKLHLITRNLQEVLGEEKLKEILKERELKIYWGTATTGKPHVAYFVPMSKIA 60
Query: 61 DFLKAGCEVTILFADLHAYLDNMKAPWELLELRVSYYENVIKAMLESIGVPLEKLKFIKG 120
DFLKAGCEVTILFADLHAYLDNMKAPWELLELRVSYYENVIKAMLESIGVPLEKLKFIKG
Sbjct: 61 DFLKAGCEVTILFADLHAYLDNMKAPWELLELRVSYYENVIKAMLESIGVPLEKLKFIKG 120
Query: 121 TDYQLSKEYTLDVYRLSSVVTQHDSKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVD 180
TDYQLSKEYTLDVYRLSSVVTQHDSKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVD
Sbjct: 121 TDYQLSKEYTLDVYRLSSVVTQHDSKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVD 180
Query: 181 AQFGGIDQRKIFTFAEKYLPALGYSKRVHLMNPMVPGLTGSKMSSSEEESKIDLLDRKED 240
AQFGGIDQRKIFTFAEKYLPALGYSKRVHLMNPMVPGLTGSKMSSSEEESKIDLLDRKED
Sbjct: 181 AQFGGIDQRKIFTFAEKYLPALGYSKRVHLMNPMVPGLTGSKMSSSEEESKIDLLDRKED 240
Query: 241 VKKKLKKAFCEPGNVENNGVLSFIKHVLFPLKSEFVILRDEKWGGNKTYTAYVDLEKDFA 300
VKKKLKKAFCEPGNVENNGVLSFIKHVLFPLKSEFVILRDEKWGGNKTYTAYVDLEKDFA
Sbjct: 241 VKKKLKKAFCEPGNVENNGVLSFIKHVLFPLKSEFVILRDEKWGGNKTYTAYVDLEKDFA 300
Query: 301 AEVVHPGDLKNSVEVALNKLLDPIREKFNTPALKKLASAAYPDPSKQKPMAKGPAKNSEP 360
AEVVHPGDLKNSVEVALNKLLDPIREKFNTPALKKLASAAYPDPSKQKPMAKGPAKNSEP
Sbjct: 301 AEVVHPGDLKNSVEVALNKLLDPIREKFNTPALKKLASAAYPDPSKQKPMAKGPAKNSEP 360
Query: 361 EEVIPSRLDIRVGKIITVEKHPDADSLYVEKIDVGEAEPRTVVSGLVQFVPKEELQDRLV 420
EEVIPSRLDIRVGKIITVEKHPDADSLYVEKIDVGEAEPRTVVSGLVQFVPKEELQDRLV
Sbjct: 361 EEVIPSRLDIRVGKIITVEKHPDADSLYVEKIDVGEAEPRTVVSGLVQFVPKEELQDRLV 420
Query: 421 VVLCNLKPQKMRGVESQGMLLCASIEGINRQVEPLDPPAGSAPGEHVFVKGYEKGQPDEE 480
VVLCNLKPQKMRGVESQGMLLCASIEGINRQVEPLDPPAGSAPGEHVFVKGYEKGQPDEE
Sbjct: 421 VVLCNLKPQKMRGVESQGMLLCASIEGINRQVEPLDPPAGSAPGEHVFVKGYEKGQPDEE 480
Query: 481 LKPKKKVFEKLQADFKISEECIAQWKQTNFMTKLGSISCKSLKGGNIS 528
LKPKKKVFEKLQADFKISEECIAQWKQTNFMTKLGSISCKSLKGGNIS
Sbjct: 481 LKPKKKVFEKLQADFKISEECIAQWKQTNFMTKLGSISCKSLKGGNIS 528
>gi|215490011 small inducible cytokine subfamily E, member 1 isoform
b precursor [Homo sapiens]
Length = 336
Score = 170 bits (430), Expect = 3e-42
Identities = 86/171 (50%), Positives = 121/171 (70%), Gaps = 6/171 (3%)
Query: 343 DPSKQKPMAKGPAKNSEPEEVIPSRLDIRVGKIITVEKHPDADSLYVEKIDVGEAEPRTV 402
+ ++K + + +S+P +V SRLD+R+G IIT KHPDADSLYVE++DVGE PRTV
Sbjct: 156 EKKEKKQQSIAGSADSKPIDV--SRLDLRIGCIITARKHPDADSLYVEEVDVGEIAPRTV 213
Query: 403 VSGLVQFVPKEELQDRLVVVLCNLKPQKMRGVESQGMLLCASIEGINRQVEPLDPPAGSA 462
VSGLV VP E++Q+R+V++LCNLKP KMRGV SQ M++CAS ++E L PP GS
Sbjct: 214 VSGLVNHVPLEQMQNRMVILLCNLKPAKMRGVLSQAMVMCASSP---EKIEILAPPNGSV 270
Query: 463 PGEHVFVKGYEKGQPDEELKPKKKVFEKLQADFKISEECIAQWKQTNFMTK 513
PG+ + + G+PD+EL PKKK++E++Q D ++EC+A +K F K
Sbjct: 271 PGDRITFDAF-PGEPDKELNPKKKIWEQIQPDLHTNDECVATYKGVPFEVK 320
>gi|215490009 small inducible cytokine subfamily E, member 1 isoform
a precursor [Homo sapiens]
Length = 312
Score = 170 bits (430), Expect = 3e-42
Identities = 86/171 (50%), Positives = 121/171 (70%), Gaps = 6/171 (3%)
Query: 343 DPSKQKPMAKGPAKNSEPEEVIPSRLDIRVGKIITVEKHPDADSLYVEKIDVGEAEPRTV 402
+ ++K + + +S+P +V SRLD+R+G IIT KHPDADSLYVE++DVGE PRTV
Sbjct: 132 EKKEKKQQSIAGSADSKPIDV--SRLDLRIGCIITARKHPDADSLYVEEVDVGEIAPRTV 189
Query: 403 VSGLVQFVPKEELQDRLVVVLCNLKPQKMRGVESQGMLLCASIEGINRQVEPLDPPAGSA 462
VSGLV VP E++Q+R+V++LCNLKP KMRGV SQ M++CAS ++E L PP GS
Sbjct: 190 VSGLVNHVPLEQMQNRMVILLCNLKPAKMRGVLSQAMVMCASSP---EKIEILAPPNGSV 246
Query: 463 PGEHVFVKGYEKGQPDEELKPKKKVFEKLQADFKISEECIAQWKQTNFMTK 513
PG+ + + G+PD+EL PKKK++E++Q D ++EC+A +K F K
Sbjct: 247 PGDRITFDAF-PGEPDKELNPKKKIWEQIQPDLHTNDECVATYKGVPFEVK 296
>gi|45006986 small inducible cytokine subfamily E, member 1 isoform
a precursor [Homo sapiens]
Length = 312
Score = 170 bits (430), Expect = 3e-42
Identities = 86/171 (50%), Positives = 121/171 (70%), Gaps = 6/171 (3%)
Query: 343 DPSKQKPMAKGPAKNSEPEEVIPSRLDIRVGKIITVEKHPDADSLYVEKIDVGEAEPRTV 402
+ ++K + + +S+P +V SRLD+R+G IIT KHPDADSLYVE++DVGE PRTV
Sbjct: 132 EKKEKKQQSIAGSADSKPIDV--SRLDLRIGCIITARKHPDADSLYVEEVDVGEIAPRTV 189
Query: 403 VSGLVQFVPKEELQDRLVVVLCNLKPQKMRGVESQGMLLCASIEGINRQVEPLDPPAGSA 462
VSGLV VP E++Q+R+V++LCNLKP KMRGV SQ M++CAS ++E L PP GS
Sbjct: 190 VSGLVNHVPLEQMQNRMVILLCNLKPAKMRGVLSQAMVMCASSP---EKIEILAPPNGSV 246
Query: 463 PGEHVFVKGYEKGQPDEELKPKKKVFEKLQADFKISEECIAQWKQTNFMTK 513
PG+ + + G+PD+EL PKKK++E++Q D ++EC+A +K F K
Sbjct: 247 PGDRITFDAF-PGEPDKELNPKKKIWEQIQPDLHTNDECVATYKGVPFEVK 296
>gi|47419920 tryptophanyl-tRNA synthetase isoform b [Homo sapiens]
Length = 430
Score = 38.9 bits (89), Expect = 0.012
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 186 IDQRKIFTFAEKYLPALGYSKRVHLMNPMVPGLTG--SKMSSSEEESKIDLLDRKEDVKK 243
IDQ F P +GY K L + P L G +KMS+S+ S I L D + +K
Sbjct: 270 IDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTDTAKQIKT 329
Query: 244 KLKK 247
K+ K
Sbjct: 330 KVNK 333
>gi|47419918 tryptophanyl-tRNA synthetase isoform b [Homo sapiens]
Length = 430
Score = 38.9 bits (89), Expect = 0.012
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 186 IDQRKIFTFAEKYLPALGYSKRVHLMNPMVPGLTG--SKMSSSEEESKIDLLDRKEDVKK 243
IDQ F P +GY K L + P L G +KMS+S+ S I L D + +K
Sbjct: 270 IDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTDTAKQIKT 329
Query: 244 KLKK 247
K+ K
Sbjct: 330 KVNK 333
>gi|47419916 tryptophanyl-tRNA synthetase isoform a [Homo sapiens]
Length = 471
Score = 38.9 bits (89), Expect = 0.012
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 186 IDQRKIFTFAEKYLPALGYSKRVHLMNPMVPGLTG--SKMSSSEEESKIDLLDRKEDVKK 243
IDQ F P +GY K L + P L G +KMS+S+ S I L D + +K
Sbjct: 311 IDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTDTAKQIKT 370
Query: 244 KLKK 247
K+ K
Sbjct: 371 KVNK 374
>gi|47419914 tryptophanyl-tRNA synthetase isoform a [Homo sapiens]
Length = 471
Score = 38.9 bits (89), Expect = 0.012
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 186 IDQRKIFTFAEKYLPALGYSKRVHLMNPMVPGLTG--SKMSSSEEESKIDLLDRKEDVKK 243
IDQ F P +GY K L + P L G +KMS+S+ S I L D + +K
Sbjct: 311 IDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTDTAKQIKT 370
Query: 244 KLKK 247
K+ K
Sbjct: 371 KVNK 374
>gi|191251777 breast carcinoma amplified sequence 1 [Homo sapiens]
Length = 584
Score = 35.8 bits (81), Expect = 0.099
Identities = 72/322 (22%), Positives = 123/322 (38%), Gaps = 52/322 (16%)
Query: 215 VPGLTGSKMSSSEEESKIDLLDRKEDVKKKLKKAFCE-PGNVE----------------- 256
VPGL+G S + + D++D KE ++L A C PG+ E
Sbjct: 227 VPGLSGQ---SDDVPAGKDIVDGKEKEGQELGTADCSVPGDPEGLETAKDDSQAAAIAEN 283
Query: 257 NNGVLSFIKHVLFPLKSEFVILRDEKWGGNKTYTAYVDLEKDFA--AEVVHPGDLKNSVE 314
NN ++SF K ++ P K+E E G K+ T DL+ D A G KNS
Sbjct: 284 NNSIMSFFKTLVSPNKAE-TKKDPEDTGAEKSPTTSADLKSDKANFTSQETQGAGKNS-- 340
Query: 315 VALNKLLDPI--REKFNTPALKKLASAAYPDPSKQKPMAKGPAKNSEPEEVIPSRLDIRV 372
K +P + TP K + P+ P+ K K S E+ +P+ + V
Sbjct: 341 ----KGCNPSGHTQSVTTPEPAKEGTKEKSGPT-SLPLGKLFWKKSVKEDSVPTGAEENV 395
Query: 373 ---GKIITVEKHPDADSLYVEKIDVGEAEPRTVVSGLVQFVPKEELQDR--LVVVLCNLK 427
+ ++ +L ++ G+A P + L +EE + R L+ L +
Sbjct: 396 VCESPVEIIKSKEVESALQTVDLNEGDAAPEPTEAKL----KREESKPRTSLMAFLRQMS 451
Query: 428 PQKMRGVESQGML-----LCASIEGINRQVEPLDPPAGSAPGEHVFVKGYEKGQPDEELK 482
+ G+ + C + + + + P +P AP KG E D++
Sbjct: 452 VKGDGGITHSEEINGKDSSCQTSDSTEKTITPPEPEPTGAP-----QKGKEGSSKDKKSA 506
Query: 483 PKKKVFEKLQADFKISEECIAQ 504
+ + + + K +C Q
Sbjct: 507 AEMNKQKSNKQEAKEPAQCTEQ 528
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 35.0 bits (79), Expect = 0.17
Identities = 37/150 (24%), Positives = 69/150 (46%), Gaps = 12/150 (8%)
Query: 342 PDPSKQKPMAKGPAKNSEPEEVIPSRLDIRVGKIITVEKHPDADSLYVEKIDVGEAEPRT 401
P +++P PA EP+++IP + +V I E P + + I+ + +PR
Sbjct: 10825 PVAEEEEPEVPPPAVPEEPKKIIPEK---KVPVIKKPEAPPPKEPEPEKVIEKPKLKPRP 10881
Query: 402 VVSGLVQFVPKEELQDRLVVVLCNLK---PQKMRGVESQGMLLCASIEGINRQVEPLDPP 458
PKE++++++ + K P+K + V + L + G ++V L P
Sbjct: 10882 PPPPPAP--PKEDVKEKIFQLKAIPKKKVPEKPQ-VPEKVELTPLKVPGGEKKVRKLLPE 10938
Query: 459 AGSAPGEHVFVKGYEKGQPDEE---LKPKK 485
P E V +K + +P+EE ++PKK
Sbjct: 10939 RKPEPKEEVVLKSVLRKRPEEEEPKVEPKK 10968
Score = 32.7 bits (73), Expect = 0.84
Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 5/165 (3%)
Query: 326 EKFNTPALKKLAS--AAYPD-PSKQKPMAKGPAKNSEPEEVIPSRLDIRVGKIITVEKHP 382
EK P KK+ + A P+ P K P K P + E P+++ K+I EK P
Sbjct: 10015 EKVPVPVPKKVEAPPAKVPEVPKKPVPEKKVPVPAPKKVEAPPAKVPEVPKKLIPEEKKP 10074
Query: 383 DADSLYVEKIDVGEAEPRTVVSGLVQFVPKEE-LQDRLVVVLCNLKPQKMRGVESQGMLL 441
VE + R V V +EE L + +V + P++ + + +L
Sbjct: 10075 TPVPKKVEAPPPKVPKKREPVPVPVALPQEEEVLFEEEIVPEEEVLPEEEEVLPEEEEVL 10134
Query: 442 CASIEGINRQVEPLDPPAGSAPGEHVFVKGYEKGQPDEELKPKKK 486
E + + E + P P E +V E+ P+EE+ P+ K
Sbjct: 10135 -PEEEEVLPEEEEIPPEEEEVPPEEEYVPEEEEFVPEEEVLPEVK 10178
>gi|157266317 ataxia telangiectasia and Rad3 related protein [Homo
sapiens]
Length = 2644
Score = 33.5 bits (75), Expect = 0.49
Identities = 42/165 (25%), Positives = 75/165 (45%), Gaps = 15/165 (9%)
Query: 60 ADFLKAG-CEVTILFADLHAYLDNMKAPWE-LLELRVSYYENVIKAMLESIGVPLEKLKF 117
+D LKA C + L +L + A +E L++R Y N+ KA+L+ +G+ ++ ++
Sbjct: 339 SDLLKAALCHL------LQYFLKFVPAGYESALQVRKVYVRNICKALLDVLGIEVD-AEY 391
Query: 118 IKGTDYQLSKEYTLDVYRLSSVVTQHDSKKAGAEVVKQVEHPLLSGLLYPGLQA--LDEE 175
+ G Y K ++++ TQ ++ + ++ + + LS L P +A EE
Sbjct: 392 LLGPLYAALKMESMEIIEEIQCQTQQENLSSNSDGISP-KRRRLSSSLNPSKRAPKQTEE 450
Query: 176 YLKVDAQFGGIDQRKIFTFAEKYLPALGYSKRVHLMNPMVPGLTG 220
VD I + AE +L YS L NP++ L G
Sbjct: 451 IKHVDMNQKSILWSALKQKAESLQISLEYS---GLKNPVIEMLEG 492
>gi|169218238 PREDICTED: similar to ataxia telangiectasia and Rad3
related protein, partial [Homo sapiens]
Length = 2105
Score = 33.5 bits (75), Expect = 0.49
Identities = 42/165 (25%), Positives = 75/165 (45%), Gaps = 15/165 (9%)
Query: 60 ADFLKAG-CEVTILFADLHAYLDNMKAPWE-LLELRVSYYENVIKAMLESIGVPLEKLKF 117
+D LKA C + L +L + A +E L++R Y N+ KA+L+ +G+ ++ ++
Sbjct: 97 SDLLKAALCHL------LQYFLKFVPAGYESALQVRKVYVRNICKALLDVLGIEVD-AEY 149
Query: 118 IKGTDYQLSKEYTLDVYRLSSVVTQHDSKKAGAEVVKQVEHPLLSGLLYPGLQA--LDEE 175
+ G Y K ++++ TQ ++ + ++ + + LS L P +A EE
Sbjct: 150 LLGPLYAALKMESMEIIEEIQCQTQQENLSSNSDGISP-KRRRLSSSLNPSKRAPKQTEE 208
Query: 176 YLKVDAQFGGIDQRKIFTFAEKYLPALGYSKRVHLMNPMVPGLTG 220
VD I + AE +L YS L NP++ L G
Sbjct: 209 IKHVDMNQKSILWSALKQKAESLQISLEYS---GLKNPVIEMLEG 250
>gi|46255064 synaptotagmin-like 2 isoform d [Homo sapiens]
Length = 1256
Score = 32.3 bits (72), Expect = 1.1
Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 8/87 (9%)
Query: 253 GNVENNGVL--SFIKHVLFPLKSEFVILRDEKWGGNKTYTAYVDLEKDFAAEVVHPGDLK 310
G V VL S ++ +P K++F +E G K +VD VVHP +
Sbjct: 186 GKVHGKQVLEPSVSENRTWPQKTDFADTEEEVKGPEKIINEHVD------KTVVHPKVKR 239
Query: 311 NSVEVALNKLLDPIREKFNTPALKKLA 337
NS+ +L+KLL +P KLA
Sbjct: 240 NSLTASLDKLLKEATGTSPSPLQAKLA 266
>gi|46255062 synaptotagmin-like 2 isoform c [Homo sapiens]
Length = 1272
Score = 32.3 bits (72), Expect = 1.1
Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 8/87 (9%)
Query: 253 GNVENNGVL--SFIKHVLFPLKSEFVILRDEKWGGNKTYTAYVDLEKDFAAEVVHPGDLK 310
G V VL S ++ +P K++F +E G K +VD VVHP +
Sbjct: 186 GKVHGKQVLEPSVSENRTWPQKTDFADTEEEVKGPEKIINEHVD------KTVVHPKVKR 239
Query: 311 NSVEVALNKLLDPIREKFNTPALKKLA 337
NS+ +L+KLL +P KLA
Sbjct: 240 NSLTASLDKLLKEATGTSPSPLQAKLA 266
>gi|19913414 adaptor-related protein complex 2, alpha 1 subunit
isoform 1 [Homo sapiens]
Length = 977
Score = 32.3 bits (72), Expect = 1.1
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 256 ENNGVLSFIKHVLFPLKSEFV--ILRDEKWGGNKTYTAYVDLEKDFAAEVVHPGDLKNSV 313
+NNGVL + + +KSEF + R + GNKT + ++F+ VVHPGDL+ +
Sbjct: 750 KNNGVLFENQLLQIGVKSEFRQNLGRMYLFYGNKTSVQF----QNFSPTVVHPGDLQTQL 805
Query: 314 EVALNKL 320
V ++
Sbjct: 806 AVQTKRV 812
>gi|19913416 adaptor-related protein complex 2, alpha 1 subunit
isoform 2 [Homo sapiens]
Length = 955
Score = 32.3 bits (72), Expect = 1.1
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 256 ENNGVLSFIKHVLFPLKSEFV--ILRDEKWGGNKTYTAYVDLEKDFAAEVVHPGDLKNSV 313
+NNGVL + + +KSEF + R + GNKT + ++F+ VVHPGDL+ +
Sbjct: 728 KNNGVLFENQLLQIGVKSEFRQNLGRMYLFYGNKTSVQF----QNFSPTVVHPGDLQTQL 783
Query: 314 EVALNKL 320
V ++
Sbjct: 784 AVQTKRV 790
>gi|21361176 aldehyde dehydrogenase 1A1 [Homo sapiens]
Length = 501
Score = 32.0 bits (71), Expect = 1.4
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query: 205 SKRVHLMNPMVPGLTGSKMSSSEEESKIDLLDRKEDVKKKLKKAFCEPGNVENNGVLSFI 264
+K+ L NP+ PG+T E+ KI LD E KK+ K C G N G F+
Sbjct: 327 AKKYILGNPLTPGVTQGPQIDKEQYDKI--LDLIESGKKEGAKLECGGGPWGNKGY--FV 382
Query: 265 KHVLFP-LKSEFVILRDEKWG 284
+ +F + E I ++E +G
Sbjct: 383 QPTVFSNVTDEMRIAKEEIFG 403
>gi|192449449 ubiquitin-conjugating enzyme E2O [Homo sapiens]
Length = 1292
Score = 30.8 bits (68), Expect = 3.2
Identities = 37/178 (20%), Positives = 62/178 (34%), Gaps = 21/178 (11%)
Query: 343 DPSKQKPMAKGPAKN-SEPEEVIPSRLDIRVGKIITVEKHPDADSLYVEKIDVGEAEPRT 401
D S + P KG +K SE E P E+ PD + VE D G EP
Sbjct: 409 DHSMEDPDKKGESKTKSEAESASP-------------EETPDGSASPVEMQDEGAEEPHE 455
Query: 402 VVSGLVQFVPKEELQDRLVVVLCNLKPQKMRGVESQGMLLCASIEGINRQVEPLDPPAGS 461
L F+ KE DRL + + + + ++ + Q +GS
Sbjct: 456 AGEQLPPFLLKEGRDDRLHSAEQDADDEAADDTDDTSSVTSSASSTTSSQ-------SGS 508
Query: 462 APGEHVFVKGYEKGQPDEELKPKKKVFEKLQADFKISEECIAQWKQTNFMTKLGSISC 519
+ K + + K K+ + +++ E + + M + GS+ C
Sbjct: 509 GTSRKKSIPLSIKNLKRKHKRKKNKITRDFKPGDRVAVEVVTTMTSADVMWQDGSVEC 566
>gi|144953876 signal-regulatory protein beta 1 isoform 1 precursor
[Homo sapiens]
Length = 398
Score = 30.4 bits (67), Expect = 4.2
Identities = 20/85 (23%), Positives = 38/85 (44%)
Query: 5 PSPEEKLHLITRNLQEVLGEEKLKEILKERELKIYWGTATTGKPHVAYFVPMSKIADFLK 64
PSP + L+ L V GE++L+ I E+ + + G + T + + +P+ I F
Sbjct: 11 PSPFLLMTLLLGRLTGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRG 70
Query: 65 AGCEVTILFADLHAYLDNMKAPWEL 89
AG +++ + + EL
Sbjct: 71 AGAGRELIYNQKEGHFPRVTTVSEL 95
>gi|144953878 signal-regulatory protein beta 1 isoform 2 precursor
[Homo sapiens]
Length = 181
Score = 30.4 bits (67), Expect = 4.2
Identities = 20/85 (23%), Positives = 38/85 (44%)
Query: 5 PSPEEKLHLITRNLQEVLGEEKLKEILKERELKIYWGTATTGKPHVAYFVPMSKIADFLK 64
PSP + L+ L V GE++L+ I E+ + + G + T + + +P+ I F
Sbjct: 11 PSPFLLMTLLLGRLTGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRG 70
Query: 65 AGCEVTILFADLHAYLDNMKAPWEL 89
AG +++ + + EL
Sbjct: 71 AGAGRELIYNQKEGHFPRVTTVSEL 95
>gi|209529703 signal-regulatory protein beta 1 isoform 3 precursor
[Homo sapiens]
Length = 398
Score = 30.0 bits (66), Expect = 5.4
Identities = 19/62 (30%), Positives = 30/62 (48%)
Query: 5 PSPEEKLHLITRNLQEVLGEEKLKEILKERELKIYWGTATTGKPHVAYFVPMSKIADFLK 64
PSP + L+ L V GEE+L+ I ++ + + G + T V +P+ I F
Sbjct: 11 PSPFLLMTLLLGRLTGVAGEEELQVIQPDKSISVAAGESATLHCTVTSLIPVGPIQWFRG 70
Query: 65 AG 66
AG
Sbjct: 71 AG 72
>gi|7661990 mastermind-like 1 [Homo sapiens]
Length = 1016
Score = 30.0 bits (66), Expect = 5.4
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 8/75 (10%)
Query: 343 DPSKQKPMAKGPAKNSEPEEVIPSRLDIRVGKIITVEKHPDADSLYVEKIDVGEAEPRTV 402
+PS+ P++ EP E +P + VG I PD +++ E E + +
Sbjct: 203 NPSESFPLSLNKELKQEPVEDLPCMITGTVGSISQSNLMPD--------LNLNEQEWKEL 254
Query: 403 VSGLVQFVPKEELQD 417
+ L + VP E+++D
Sbjct: 255 IEELNRSVPDEDMKD 269
>gi|239755097 PREDICTED: hypothetical protein XP_002346214 [Homo
sapiens]
Length = 207
Score = 29.6 bits (65), Expect = 7.1
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 10/68 (14%)
Query: 421 VVLCNLKPQKMR-GVESQGMLLCASIEGINRQVEPLDPPAGSAPGEHVFVKGYEKGQPDE 479
V +C++ P + G E+Q +LLCA + +R V P P ++P EKG+ D
Sbjct: 22 VSVCDVVPTRQGCGAEAQSLLLCAGVGLPDRCVFPTAPTLANSP---------EKGKFDV 72
Query: 480 ELKPKKKV 487
P+ V
Sbjct: 73 THPPRMAV 80
>gi|239749610 PREDICTED: hypothetical protein XP_002347102 [Homo
sapiens]
Length = 207
Score = 29.6 bits (65), Expect = 7.1
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 10/68 (14%)
Query: 421 VVLCNLKPQKMR-GVESQGMLLCASIEGINRQVEPLDPPAGSAPGEHVFVKGYEKGQPDE 479
V +C++ P + G E+Q +LLCA + +R V P P ++P EKG+ D
Sbjct: 22 VSVCDVVPTRQGCGAEAQSLLLCAGVGLPDRCVFPTAPTLANSP---------EKGKFDV 72
Query: 480 ELKPKKKV 487
P+ V
Sbjct: 73 THPPRMAV 80
>gi|87299628 biorientation of chromosomes in cell division 1-like
[Homo sapiens]
Length = 3051
Score = 29.3 bits (64), Expect = 9.3
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 8/57 (14%)
Query: 433 GVESQGMLLCASIEG---INRQVEPLDPPAGSA-----PGEHVFVKGYEKGQPDEEL 481
G ES+G+L+C S EG I VE ++ AG+A + G EKG D ++
Sbjct: 1890 GEESEGVLICESAEGDSQIGTVVEHVEAEAGAAIMNANENNVDSMSGTEKGSKDTDI 1946
>gi|31563383 serum/glucocorticoid regulated kinase 3 isoform 2 [Homo
sapiens]
Length = 464
Score = 29.3 bits (64), Expect = 9.3
Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 15/99 (15%)
Query: 127 KEYTLDVYRLSSVVTQHDSKKAGAE---VVKQVEHPLLSGLLYPGLQALDEEYLKVDAQF 183
K Y + V + V+ + + K AE ++K V+HP L GL Y Q ++ Y +D
Sbjct: 186 KFYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHY-SFQTTEKLYFVLDFVN 244
Query: 184 GG-----------IDQRKIFTFAEKYLPALGYSKRVHLM 211
GG + + +A + ALGY + ++
Sbjct: 245 GGELFFHLQRERSFPEHRARFYAAEIASALGYLHSIKIV 283
>gi|31563382 serum/glucocorticoid regulated kinase 3 isoform 1 [Homo
sapiens]
Length = 496
Score = 29.3 bits (64), Expect = 9.3
Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 15/99 (15%)
Query: 127 KEYTLDVYRLSSVVTQHDSKKAGAE---VVKQVEHPLLSGLLYPGLQALDEEYLKVDAQF 183
K Y + V + V+ + + K AE ++K V+HP L GL Y Q ++ Y +D
Sbjct: 186 KFYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHY-SFQTTEKLYFVLDFVN 244
Query: 184 GG-----------IDQRKIFTFAEKYLPALGYSKRVHLM 211
GG + + +A + ALGY + ++
Sbjct: 245 GGELFFHLQRERSFPEHRARFYAAEIASALGYLHSIKIV 283
>gi|75813626 serum/glucocorticoid regulated kinase 3 isoform 1 [Homo
sapiens]
Length = 496
Score = 29.3 bits (64), Expect = 9.3
Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 15/99 (15%)
Query: 127 KEYTLDVYRLSSVVTQHDSKKAGAE---VVKQVEHPLLSGLLYPGLQALDEEYLKVDAQF 183
K Y + V + V+ + + K AE ++K V+HP L GL Y Q ++ Y +D
Sbjct: 186 KFYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHY-SFQTTEKLYFVLDFVN 244
Query: 184 GG-----------IDQRKIFTFAEKYLPALGYSKRVHLM 211
GG + + +A + ALGY + ++
Sbjct: 245 GGELFFHLQRERSFPEHRARFYAAEIASALGYLHSIKIV 283
>gi|14717401 protocadherin alpha subfamily C, 1 isoform 1 precursor
[Homo sapiens]
Length = 963
Score = 29.3 bits (64), Expect = 9.3
Identities = 28/133 (21%), Positives = 54/133 (40%), Gaps = 25/133 (18%)
Query: 354 PAKNSEPEEVIPSRLDIRVGKIITVEKHPDADS-----------------LYVEKIDVGE 396
P S P E++P R G ++T DADS L+ ++GE
Sbjct: 560 PRNGSVPVEIVPR--SARTGHLVTKVVAEDADSGSNAWLSYHISRASDSSLFRISANIGE 617
Query: 397 AEPRTVVSGLVQFVPKEELQDRLVVVLCNLKPQKMRGVESQGMLLCASIEGINRQVEPLD 456
+V +P + ++ R+VVV+ + + + G+LL S+ + E +
Sbjct: 618 LRTARLV------LPTDAVKQRVVVVVRDHGDPPLSSSVTLGVLLSNSVPQLLPDFEDVW 671
Query: 457 PPAGSAPGEHVFV 469
P G +++++
Sbjct: 672 EPGGQLSAQNLYL 684
>gi|14717403 protocadherin alpha subfamily C, 1 isoform 2 precursor
[Homo sapiens]
Length = 818
Score = 29.3 bits (64), Expect = 9.3
Identities = 28/133 (21%), Positives = 54/133 (40%), Gaps = 25/133 (18%)
Query: 354 PAKNSEPEEVIPSRLDIRVGKIITVEKHPDADS-----------------LYVEKIDVGE 396
P S P E++P R G ++T DADS L+ ++GE
Sbjct: 560 PRNGSVPVEIVPR--SARTGHLVTKVVAEDADSGSNAWLSYHISRASDSSLFRISANIGE 617
Query: 397 AEPRTVVSGLVQFVPKEELQDRLVVVLCNLKPQKMRGVESQGMLLCASIEGINRQVEPLD 456
+V +P + ++ R+VVV+ + + + G+LL S+ + E +
Sbjct: 618 LRTARLV------LPTDAVKQRVVVVVRDHGDPPLSSSVTLGVLLSNSVPQLLPDFEDVW 671
Query: 457 PPAGSAPGEHVFV 469
P G +++++
Sbjct: 672 EPGGQLSAQNLYL 684
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.135 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,880,675
Number of Sequences: 37866
Number of extensions: 966166
Number of successful extensions: 2339
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 2313
Number of HSP's gapped (non-prelim): 49
length of query: 528
length of database: 18,247,518
effective HSP length: 107
effective length of query: 421
effective length of database: 14,195,856
effective search space: 5976455376
effective search space used: 5976455376
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.