Guide to the Human Genome
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Name: ALDH1A1 Sequence: fasta or formatted (501aa) NCBI GI: 21361176
Description:

aldehyde dehydrogenase 1A1

Referenced in:

Amino Acid Catabolism
Alcohol and Aldehyde Dehydrogenases
Liver

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.6         38           2
 C cysteine            2.2         11           2
 D aspartate           5.2         26           2
 E glutamate           6.4         32           3
 F phenylalanine       4.4         22           2
 G glycine             9.6         48           3
 H histidine           1.6          8           2
 I isoleucine          7.0         35           2
 K lysine              7.6         38           2
 L leucine             7.4         37           3
 M methionine          1.8          9           1
 N asparagine          4.0         20           2
 P proline             4.8         24           2
 Q glutamine           3.6         18           2
 R arginine            3.4         17           2
 S serine              5.8         29           3
 T threonine           5.6         28           1
 V valine              7.6         38           3
 W tryptophan          1.4          7           1
 Y tyrosine            3.2         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   aldehyde dehydrogenase 1A1 
ALDH1A2               0.738   aldehyde dehydrogenase 1A2 isoform 1 
ALDH1A3               0.713   aldehyde dehydrogenase 1A3 
ALDH2                 0.681   mitochondrial aldehyde dehydrogenase 2 precursor [Ho...
ALDH1B1               0.650   aldehyde dehydrogenase 1B1 precursor 
ALDH1A2               0.650   aldehyde dehydrogenase 1A2 isoform 2 
ALDH1A2               0.644   aldehyde dehydrogenase 1A2 isoform 3 
ALDH1L2               0.445   aldehyde dehydrogenase 1 family, member L2 
ALDH1L1               0.442   aldehyde dehydrogenase 1 family, member L1 
ALDH9A1               0.321   aldehyde dehydrogenase 9A1 
ALDH8A1               0.314   aldehyde dehydrogenase 8A1 isoform 1 
ALDH8A1               0.244   aldehyde dehydrogenase 8A1 isoform 2 
ALDH5A1               0.237   aldehyde dehydrogenase 5A1 isoform 2 precursor 
ALDH5A1               0.228   aldehyde dehydrogenase 5A1 isoform 1 precursor [Homo...
ALDH6A1               0.197   aldehyde dehydrogenase 6A1 precursor 
ALDH7A1               0.181   aldehyde dehydrogenase 7 family, member A1 
ALDH16A1              0.151   aldehyde dehydrogenase 16 family, member A1 isoform...
ALDH4A1               0.129   aldehyde dehydrogenase 4A1 isoform a precursor [Homo...
ALDH4A1               0.129   aldehyde dehydrogenase 4A1 isoform b 
ALDH4A1               0.129   aldehyde dehydrogenase 4A1 isoform a precursor [Homo...
ALDH3A1               0.128   aldehyde dehydrogenase 3A1 
ALDH3A1               0.128   aldehyde dehydrogenase 3A1 
ALDH3A1               0.128   aldehyde dehydrogenase 3A1 
ALDH3A2               0.115   aldehyde dehydrogenase 3A2 isoform 2 
ALDH3A2               0.115   aldehyde dehydrogenase 3A2 isoform 1 
ALDH16A1              0.111   aldehyde dehydrogenase 16 family, member A1 isoform...
ALDH3B1               0.098   aldehyde dehydrogenase 3B1 isoform a 
ALDH3B1               0.098   aldehyde dehydrogenase 3B1 isoform a 
ALDH3B1               0.097   aldehyde dehydrogenase 3B1 isoform b 
ALDH3B2               0.095   aldehyde dehydrogenase 3B2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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