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Search of human proteins with 4506527
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4506527 rhodopsin [Homo sapiens]
(348 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4506527 rhodopsin [Homo sapiens] 714 0.0
gi|4502387 opsin 1 (cone pigments), short-wave-sensitive [Homo s... 320 1e-87
gi|114687592 opsin 1 (cone pigments), medium-wave-sensitive 2 [H... 293 1e-79
gi|4503965 opsin 1 (cone pigments), medium-wave-sensitive [Homo ... 293 1e-79
gi|9910526 opsin 1 (cone pigments), long-wave-sensitive [Homo sa... 289 2e-78
gi|71999131 opsin 3 [Homo sapiens] 172 3e-43
gi|15150803 opsin 4 isoform 1 [Homo sapiens] 159 3e-39
gi|5730019 peropsin [Homo sapiens] 159 5e-39
gi|71999143 opsin 4 isoform 2 [Homo sapiens] 157 2e-38
gi|38678524 opsin 5 isoform 1 [Homo sapiens] 126 3e-29
gi|4557865 somatostatin receptor 5 [Homo sapiens] 118 7e-27
gi|4502607 cholecystokinin A receptor [Homo sapiens] 110 1e-24
gi|157426873 tachykinin receptor 2 [Homo sapiens] 108 7e-24
gi|4557859 somatostatin receptor 2 [Homo sapiens] 108 9e-24
gi|7669548 tachykinin receptor 3 [Homo sapiens] 106 4e-23
gi|4507343 tachykinin receptor 1 isoform long [Homo sapiens] 104 1e-22
gi|4505445 neuropeptide Y receptor Y1 [Homo sapiens] 103 2e-22
gi|188497623 neuromedin U receptor 1 [Homo sapiens] 101 1e-21
gi|223718055 opioid receptor, mu 1 isoform MOR-1H [Homo sapiens] 100 2e-21
gi|117940060 opioid receptor, mu 1 isoform MOR-1 [Homo sapiens] 100 2e-21
gi|223718712 opioid receptor, mu 1 isoform MOR-1B5 [Homo sapiens] 100 2e-21
gi|223718719 opioid receptor, mu 1 isoform MOR-1B2 [Homo sapiens] 100 2e-21
gi|223718077 opioid receptor, mu 1 isoform MOR-1B3 [Homo sapiens] 100 2e-21
gi|223718716 opioid receptor, mu 1 isoform MOR-1B1 [Homo sapiens] 100 2e-21
gi|7669546 tachykinin receptor 1 isoform short [Homo sapiens] 100 2e-21
gi|117940058 opioid receptor, mu 1 isoform MOR-1A [Homo sapiens] 100 2e-21
gi|223717969 opioid receptor, mu 1 isoform MOR-1B4 [Homo sapiens] 100 2e-21
gi|150170722 G protein-coupled receptor 50 [Homo sapiens] 100 2e-21
gi|117940055 opioid receptor, mu 1 isoform MOR-1O [Homo sapiens] 100 2e-21
gi|117940054 opioid receptor, mu 1 isoform MOR-1X [Homo sapiens] 100 2e-21
>gi|4506527 rhodopsin [Homo sapiens]
Length = 348
Score = 714 bits (1843), Expect = 0.0
Identities = 348/348 (100%), Positives = 348/348 (100%)
Query: 1 MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLY 60
MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLY
Sbjct: 1 MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLY 60
Query: 61 VTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLG 120
VTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLG
Sbjct: 61 VTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLG 120
Query: 121 GEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIP 180
GEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIP
Sbjct: 121 GEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIP 180
Query: 181 EGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQES 240
EGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQES
Sbjct: 181 EGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQES 240
Query: 241 ATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAI 300
ATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAI
Sbjct: 241 ATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAI 300
Query: 301 YNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVAPA 348
YNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVAPA
Sbjct: 301 YNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVAPA 348
>gi|4502387 opsin 1 (cone pigments), short-wave-sensitive [Homo
sapiens]
Length = 348
Score = 320 bits (820), Expect = 1e-87
Identities = 155/338 (45%), Positives = 223/338 (65%), Gaps = 5/338 (1%)
Query: 9 FYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKL 68
FY+ F N + V P++ PQY++A W F + AA+M + ++GFP+N + L T+++KKL
Sbjct: 9 FYL-FKNISSV--GPWDGPQYHIAPVWAFYLQAAFMGTVFLIGFPLNAMVLVATLRYKKL 65
Query: 69 RTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSL 128
R PLNYIL+N++ + + S +GYFVFG C LEGF T+ G + WSL
Sbjct: 66 RQPLNYILVNVSFGGFLLCIFSVFPVFVASCNGYFVFGRHVCALEGFLGTVAGLVTGWSL 125
Query: 129 VVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCG 188
LA ERY+V+CKP NFRF HA+ V TW + + + PP GWSR+IPEGLQCSCG
Sbjct: 126 AFLAFERYIVICKPFGNFRFSSKHALTVVLATWTIGIGVSIPPFFGWSRFIPEGLQCSCG 185
Query: 189 IDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEK 248
D+YT+ + +ES+ ++F+ F +P+ +I F Y QL+ +K AAQQQESATTQKAE+
Sbjct: 186 PDWYTVGTKYRSESYTWFLFIFCFIVPLSLICFSYTQLLRALKAVAAQQQESATTQKAER 245
Query: 249 EVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIM 308
EV+RMV++MV +F +C+VPYA+ A Y+ ++ +TIP+FF+KSA IYNP+IY
Sbjct: 246 EVSRMVVVMVGSFCVCYVPYAAFAMYMVNNRNHGLDLRLVTIPSFFSKSACIYNPIIYCF 305
Query: 309 MNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVA 346
MNKQF+ C++ + CGK + D+ + + KTE S V+
Sbjct: 306 MNKQFQACIMKMV-CGK-AMTDESDTCSSQKTEVSTVS 341
>gi|114687592 opsin 1 (cone pigments), medium-wave-sensitive 2 [Homo
sapiens]
Length = 364
Score = 293 bits (751), Expect = 1e-79
Identities = 153/345 (44%), Positives = 213/345 (61%), Gaps = 6/345 (1%)
Query: 2 NGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYV 61
+ T+ F SN+T R PFE P Y++A W + + + +M +++ N L L
Sbjct: 21 DSTQSSIFTYTNSNST---RGPFEGPNYHIAPRWVYHLTSVWMIFVVIASVFTNGLVLAA 77
Query: 62 TVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGG 121
T++ KKLR PLN+IL+NLAVADL + T ++ ++GYFV G C LEG+ +L G
Sbjct: 78 TMKFKKLRHPLNWILVNLAVADLAETVIASTISVVNQVYGYFVLGHPMCVLEGYTVSLCG 137
Query: 122 EIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPE 181
LWSL +++ ER++VVCKP N RF AI+G+AF+W+ A APP+ GWSRY P
Sbjct: 138 ITGLWSLAIISWERWMVVCKPFGNVRFDAKLAIVGIAFSWIWAAVWTAPPIFGWSRYWPH 197
Query: 182 GLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESA 241
GL+ SCG D ++ +S++I + V P+ II CY Q+ ++ A QQ+ES
Sbjct: 198 GLKTSCGPDVFSGSSYPGVQSYMIVLMVTCCITPLSIIVLCYLQVWLAIRAVAKQQKESE 257
Query: 242 TTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIY 301
+TQKAEKEVTRMV++MV+AF CW PYA A + + G F P+ +PAFFAKSA IY
Sbjct: 258 STQKAEKEVTRMVVVMVLAFCFCWGPYAFFACFAAANPGYPFHPLMAALPAFFAKSATIY 317
Query: 302 NPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVA 346
NPVIY+ MN+QFRNC+L GK + D ++ SKTE S V+
Sbjct: 318 NPVIYVFMNRQFRNCILQLF--GKK-VDDGSELSSASKTEVSSVS 359
>gi|4503965 opsin 1 (cone pigments), medium-wave-sensitive [Homo
sapiens]
Length = 364
Score = 293 bits (751), Expect = 1e-79
Identities = 153/345 (44%), Positives = 213/345 (61%), Gaps = 6/345 (1%)
Query: 2 NGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYV 61
+ T+ F SN+T R PFE P Y++A W + + + +M +++ N L L
Sbjct: 21 DSTQSSIFTYTNSNST---RGPFEGPNYHIAPRWVYHLTSVWMIFVVIASVFTNGLVLAA 77
Query: 62 TVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGG 121
T++ KKLR PLN+IL+NLAVADL + T ++ ++GYFV G C LEG+ +L G
Sbjct: 78 TMKFKKLRHPLNWILVNLAVADLAETVIASTISVVNQVYGYFVLGHPMCVLEGYTVSLCG 137
Query: 122 EIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPE 181
LWSL +++ ER++VVCKP N RF AI+G+AF+W+ A APP+ GWSRY P
Sbjct: 138 ITGLWSLAIISWERWMVVCKPFGNVRFDAKLAIVGIAFSWIWAAVWTAPPIFGWSRYWPH 197
Query: 182 GLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESA 241
GL+ SCG D ++ +S++I + V P+ II CY Q+ ++ A QQ+ES
Sbjct: 198 GLKTSCGPDVFSGSSYPGVQSYMIVLMVTCCITPLSIIVLCYLQVWLAIRAVAKQQKESE 257
Query: 242 TTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIY 301
+TQKAEKEVTRMV++MV+AF CW PYA A + + G F P+ +PAFFAKSA IY
Sbjct: 258 STQKAEKEVTRMVVVMVLAFCFCWGPYAFFACFAAANPGYPFHPLMAALPAFFAKSATIY 317
Query: 302 NPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVA 346
NPVIY+ MN+QFRNC+L GK + D ++ SKTE S V+
Sbjct: 318 NPVIYVFMNRQFRNCILQLF--GKK-VDDGSELSSASKTEVSSVS 359
>gi|9910526 opsin 1 (cone pigments), long-wave-sensitive [Homo
sapiens]
Length = 364
Score = 289 bits (740), Expect = 2e-78
Identities = 149/345 (43%), Positives = 211/345 (61%), Gaps = 6/345 (1%)
Query: 2 NGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYV 61
+ T+ F SN+T R PFE P Y++A W + + + +M ++ N L L
Sbjct: 21 DSTQSSIFTYTNSNST---RGPFEGPNYHIAPRWVYHLTSVWMIFVVTASVFTNGLVLAA 77
Query: 62 TVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGG 121
T++ KKLR PLN+IL+NLAVADL + T ++ + GYFV G C LEG+ +L G
Sbjct: 78 TMKFKKLRHPLNWILVNLAVADLAETVIASTISIVNQVSGYFVLGHPMCVLEGYTVSLCG 137
Query: 122 EIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPE 181
LWSL +++ ER++VVCKP N RF AI+G+AF+W+ + APP+ GWSRY P
Sbjct: 138 ITGLWSLAIISWERWLVVCKPFGNVRFDAKLAIVGIAFSWIWSAVWTAPPIFGWSRYWPH 197
Query: 182 GLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESA 241
GL+ SCG D ++ +S++I + V IP+ II CY Q+ ++ A QQ+ES
Sbjct: 198 GLKTSCGPDVFSGSSYPGVQSYMIVLMVTCCIIPLAIIMLCYLQVWLAIRAVAKQQKESE 257
Query: 242 TTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIY 301
+TQKAEKEVTRMV++M+ A+ +CW PY A + + G F P+ +PA+FAKSA IY
Sbjct: 258 STQKAEKEVTRMVVVMIFAYCVCWGPYTFFACFAAANPGYAFHPLMAALPAYFAKSATIY 317
Query: 302 NPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVA 346
NPVIY+ MN+QFRNC+L GK + D ++ SKTE S V+
Sbjct: 318 NPVIYVFMNRQFRNCILQLF--GKK-VDDGSELSSASKTEVSSVS 359
>gi|71999131 opsin 3 [Homo sapiens]
Length = 402
Score = 172 bits (437), Expect = 3e-43
Identities = 94/297 (31%), Positives = 163/297 (54%), Gaps = 11/297 (3%)
Query: 31 LAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGG 90
L P + LA + + +LG N L L + + ++LRTP + +L+N++++DL + L G
Sbjct: 35 LFSPGTYERLALLLGSIGLLGVGNNLLVLVLYYKFQRLRTPTHLLLVNISLSDLLVSLFG 94
Query: 91 FTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYV-VVCKPMSNFRFG 149
T T + L +V+ GC +GF +L G +++ +L VLA ERY+ VV + NF +
Sbjct: 95 VTFTFVSCLRNGWVWDTVGCVWDGFSGSLFGIVSIATLTVLAYERYIRVVHARVINFSW- 153
Query: 150 ENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFV 209
A + + W+ +LA A PL GW+RYI + C +D+ + + N+ SFV+++F+
Sbjct: 154 ---AWRAITYIWLYSLAWAGAPLLGWNRYILDVHGLGCTVDWKS--KDANDSSFVLFLFL 208
Query: 210 VHFTIPMIIIFFCYGQLVFTVKEAAA----QQQESATTQKAEKEVTRMVIIMVIAFLICW 265
+P+ +I CYG ++++++ Q + K EK++ +M +M+ FL+CW
Sbjct: 209 GCLVVPLGVIAHCYGHILYSIRMLRCVEDLQTIQVIKILKYEKKLAKMCFLMIFTFLVCW 268
Query: 266 VPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTIC 322
+PY + F + G P + FAKS +YNPVIY+ M ++FR +L +C
Sbjct: 269 MPYIVICFLVVNGHGHLVTPTISIVSYLFAKSNTVYNPVIYVFMIRKFRRSLLQLLC 325
>gi|15150803 opsin 4 isoform 1 [Homo sapiens]
Length = 478
Score = 159 bits (403), Expect = 3e-39
Identities = 85/297 (28%), Positives = 154/297 (51%), Gaps = 15/297 (5%)
Query: 40 LAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSL 99
L + L+ + G N +Y + + LRTP N ++NLAV+D M +SL
Sbjct: 73 LGTVILLVGLTGMLGNLTVIYTFCRSRSLRTPANMFIINLAVSDFLMSFTQAPVFFTSSL 132
Query: 100 HGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFG-ENHAIMGVA 158
+ ++FG TGC F L G ++ +L +A++RY+V+ +P++ F + A +
Sbjct: 133 YKQWLFGETGCEFYAFCGALFGISSMITLTAIALDRYLVITRPLATFGVASKRRAAFVLL 192
Query: 159 FTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMII 218
W+ ALA + PP GWS Y+PEGL SC DY + P V + ++ FV F +P++I
Sbjct: 193 GVWLYALAWSLPPFFGWSAYVPEGLLTSCSWDYMSFTPAVRAYTMLLCCFV--FFLPLLI 250
Query: 219 IFFCYGQLVFTVKEAAAQQQESATTQ------------KAEKEVTRMVIIMVIAFLICWV 266
I +CY + ++E Q + ++E ++ ++++++++ F++ W
Sbjct: 251 IIYCYIFIFRAIRETGRALQTFGACKGNGESLWQRQRLQSECKMAKIMLLVILLFVLSWA 310
Query: 267 PYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICC 323
PY++VA F P ++PA AK++AI+NP+IY + + ++R + + C
Sbjct: 311 PYSAVALVAFAGYAHVLTPYMSSVPAVIAKASAIHNPIIYAITHPKYRVAIAQHLPC 367
>gi|5730019 peropsin [Homo sapiens]
Length = 337
Score = 159 bits (401), Expect = 5e-39
Identities = 86/293 (29%), Positives = 152/293 (51%), Gaps = 10/293 (3%)
Query: 36 QFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTL 95
+ +++A Y+ + ++ N + L + +++K+LRTP N I++NLAV D+ + G+ +
Sbjct: 24 EHNIVATYLIMAGMISIISNIIVLGIFIKYKELRTPTNAIIINLAVTDIGVSSIGYPMSA 83
Query: 96 YTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIM 155
+ L+G + FG GC + G ++ L V+A++RY+ +C P R N I
Sbjct: 84 ASDLYGSWKFGYAGCQVYAGLNIFFGMASIGLLTVVAVDRYLTICLPDVGRRMTTNTYIG 143
Query: 156 GVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIY---MFVVHF 212
+ W+ L A P+ GW+ Y P+ +C I++ N+ SFV Y + ++F
Sbjct: 144 LILGAWINGLFWALMPIIGWASYAPDPTGATCTINW-----RKNDRSFVSYTMTVIAINF 198
Query: 213 TIPMIIIFFCYGQLVFTVK-EAAAQQQESATTQKAEK-EVTRMVIIMVIAFLICWVPYAS 270
+P+ ++F+CY + ++K + ES +++ +VT+M +IM+ FL+ W PY+
Sbjct: 199 IVPLTVMFYCYYHVTLSIKHHTTSDCTESLNRDWSDQIDVTKMSVIMICMFLVAWSPYSI 258
Query: 271 VAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICC 323
V + P I FAKS+ YNP IY++ NK+FR ML C
Sbjct: 259 VCLWASFGDPKKIPPPMAIIAPLFAKSSTFYNPCIYVVANKKFRRAMLAMFKC 311
>gi|71999143 opsin 4 isoform 2 [Homo sapiens]
Length = 489
Score = 157 bits (396), Expect = 2e-38
Identities = 82/276 (29%), Positives = 147/276 (53%), Gaps = 15/276 (5%)
Query: 61 VTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLG 120
V +Q + LRTP N ++NLAV+D M +SL+ ++FG TGC F L
Sbjct: 105 VMMQSRSLRTPANMFIINLAVSDFLMSFTQAPVFFTSSLYKQWLFGETGCEFYAFCGALF 164
Query: 121 GEIALWSLVVLAIERYVVVCKPMSNFRFG-ENHAIMGVAFTWVMALACAAPPLAGWSRYI 179
G ++ +L +A++RY+V+ +P++ F + A + W+ ALA + PP GWS Y+
Sbjct: 165 GISSMITLTAIALDRYLVITRPLATFGVASKRRAAFVLLGVWLYALAWSLPPFFGWSAYV 224
Query: 180 PEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQE 239
PEGL SC DY + P V + ++ FV F +P++II +CY + ++E Q
Sbjct: 225 PEGLLTSCSWDYMSFTPAVRAYTMLLCCFV--FFLPLLIIIYCYIFIFRAIRETGRALQT 282
Query: 240 SATTQ------------KAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIF 287
+ ++E ++ ++++++++ F++ W PY++VA F P
Sbjct: 283 FGACKGNGESLWQRQRLQSECKMAKIMLLVILLFVLSWAPYSAVALVAFAGYAHVLTPYM 342
Query: 288 MTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICC 323
++PA AK++AI+NP+IY + + ++R + + C
Sbjct: 343 SSVPAVIAKASAIHNPIIYAITHPKYRVAIAQHLPC 378
>gi|38678524 opsin 5 isoform 1 [Homo sapiens]
Length = 354
Score = 126 bits (317), Expect = 3e-29
Identities = 76/287 (26%), Positives = 139/287 (48%), Gaps = 5/287 (1%)
Query: 35 WQFSMLAAYMFLLI-VLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTS 93
W+ ++A + +I +L N LY++ + KK P + +NLAV DL + + G
Sbjct: 30 WEADLVAGFYLTIIGILSTFGNGYVLYMSSRRKKKLRPAEIMTINLAVCDLGISVVGKPF 89
Query: 94 TLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHA 153
T+ + +VFG GC G+ G +L ++ ++++RY+ +C HA
Sbjct: 90 TIISCFCHRWVFGWIGCRWYGWAGFFFGCGSLITMTAVSLDRYLKICYLSYGVWLKRKHA 149
Query: 154 IMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFT 213
+ +A W A PL G Y+PE SC +D++ + V + F++ +
Sbjct: 150 YICLAAIWAYASFWTTMPLVGLGDYVPEPFGTSCTLDWWLAQASVGGQVFILNILFFCLL 209
Query: 214 IPMIIIFFCYGQLVFTV----KEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYA 269
+P +I F Y +++ V KE A ++ E ++T++ +++ FLI W+PYA
Sbjct: 210 LPTAVIVFSYVKIIAKVKSSSKEVAHFDSRIHSSHVLEMKLTKVAMLICAGFLIAWIPYA 269
Query: 270 SVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNC 316
V+ + + + +P AKSAA+YNP+IY +++ +F C
Sbjct: 270 VVSVWSAFGRPDSIPIQLSVVPTLLAKSAAMYNPIIYQVIDYKFACC 316
>gi|4557865 somatostatin receptor 5 [Homo sapiens]
Length = 364
Score = 118 bits (296), Expect = 7e-27
Identities = 89/306 (29%), Positives = 157/306 (51%), Gaps = 19/306 (6%)
Query: 38 SMLAAYMFLLI-VLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLG-GFTSTL 95
++L ++LL+ G N L +YV ++ K++T N +LNLAVAD+ +LG F +T
Sbjct: 40 AVLVPVLYLLVCAAGLGGNTLVIYVVLRFAKMKTVTNIYILNLAVADVLYMLGLPFLATQ 99
Query: 96 YTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENH-AI 154
+ ++ FGP C L + +++ L V++++RY+ V P+S+ R+ A
Sbjct: 100 NAA--SFWPFGPVLCRLVMTLDGVNQFTSVFCLTVMSVDRYLAVVHPLSSARWRRPRVAK 157
Query: 155 MGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTI 214
+ A WV++L C + PL ++ + EG C+ + + F+IY V+ F
Sbjct: 158 LASAAAWVLSL-CMSLPLLVFAD-VQEGGTCNAS---WPEPVGLWGAVFIIYTAVLGFFA 212
Query: 215 PMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAF- 273
P+++I CY L+ VK AA + +++E++VTRMV+++V+ F CW+P+ +V
Sbjct: 213 PLLVICLCY--LLIVVKVRAAGVRVGCVRRRSERKVTRMVLVVVLVFAGCWLPFFTVNIV 270
Query: 274 ---YIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGD 330
+ ++ G F + +A S A NPV+Y ++ FR +C K G
Sbjct: 271 NLAVALPQEPASAGLYFFVVILSYANSCA--NPVLYGFLSDNFRQSFQKVLCLRKGS-GA 327
Query: 331 DEASAT 336
+A AT
Sbjct: 328 KDADAT 333
>gi|4502607 cholecystokinin A receptor [Homo sapiens]
Length = 428
Score = 110 bits (276), Expect = 1e-24
Identities = 93/368 (25%), Positives = 164/368 (44%), Gaps = 75/368 (20%)
Query: 39 MLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTS 98
+L + +FLL VLG N L + V +++K++RT N LL+LAV+DL + L L +
Sbjct: 46 LLYSLIFLLSVLG---NTLVITVLIRNKRMRTVTNIFLLSLAVSDLMLCLFCMPFNLIPN 102
Query: 99 LHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPM-SNFRFGENHAIMGV 157
L F+FG C +F ++ ++LV +++ERY +CKP+ S ++HA+ +
Sbjct: 103 LLKDFIFGSAVCKTTTYFMGTSVSVSTFNLVAISLERYGAICKPLQSRVWQTKSHALKVI 162
Query: 158 AFTWVMALACAAP-PLAGWSRYIP--EGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTI 214
A TW ++ P P+ +S +P + + + + L +V +S+ ++ ++ F I
Sbjct: 163 AATWCLSFTIMTPYPI--YSNLVPFTKNNNQTANMCRFLLPNDVMQQSWHTFLLLILFLI 220
Query: 215 PMIIIFFCYG----QLVFTVKEAAAQQQ-------------------------------- 238
P I++ YG +L +K A+Q++
Sbjct: 221 PGIVMMVAYGLISLELYQGIKFEASQKKSAKERKPSTTSSGKYEDSDGCYLQKTRPPRKL 280
Query: 239 -------------------ESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQ 279
SA A+K V RM+I++V+ F +CW+P S +
Sbjct: 281 ELRQLSTGSSSRANRIRSNSSAANLMAKKRVIRMLIVIVVLFFLCWMPIFSANAWRAYDT 340
Query: 280 GSNFGPIFMTIPAF---FAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNP--------L 328
S + T +F + +++ NP+IY MNK+FR + T C NP +
Sbjct: 341 ASAERRLSGTPISFILLLSYTSSCVNPIIYCFMNKRFRLGFMATFPCCPNPGPPGARGEV 400
Query: 329 GDDEASAT 336
G++E T
Sbjct: 401 GEEEEGGT 408
>gi|157426873 tachykinin receptor 2 [Homo sapiens]
Length = 398
Score = 108 bits (270), Expect = 7e-24
Identities = 82/349 (23%), Positives = 164/349 (46%), Gaps = 31/349 (8%)
Query: 12 PFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTP 71
P SN TG+ + F P WQ ++ A L+++ N + +++ + H+++RT
Sbjct: 16 PESNTTGI--TAFSMPS------WQLALWATAYLALVLVAVTGNAIVIWIILAHRRMRTV 67
Query: 72 LNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVL 131
NY ++NLA+ADL M + H + FG C + F ++++S+ +
Sbjct: 68 TNYFIVNLALADLCMAAFNAAFNFVYASHNIWYFGRAFCYFQNLFPITAMFVSIYSMTAI 127
Query: 132 AIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDY 191
A +RY+ + P R +A W++ALA A+P + + +G C + +
Sbjct: 128 AADRYMAIVHPFQP-RLSAPSTKAVIAGIWLVALALASPQCFYSTVTMDQG-ATKCVVAW 185
Query: 192 YTLKPEVNNESFVIYMFVV---HFTIPMIIIFFCYGQLVFTV--KEAAAQQQESATTQ-- 244
+ ++ ++Y VV + +P+ ++F Y + T+ + Q A +
Sbjct: 186 ---PEDSGGKTLLLYHLVVIALIYFLPLAVMFVAYSVIGLTLWRRAVPGHQAHGANLRHL 242
Query: 245 KAEKEVTRMVIIMVIAFLICWVPY------ASVAFYIFTHQGSNFGPIFMTIPAFFAKSA 298
+A K+ + ++++V+ F ICW+PY S I+ H+ +++ + + A S+
Sbjct: 243 QAMKKFVKTMVLVVLTFAICWLPYHLYFILGSFQEDIYCHK--FIQQVYLAL-FWLAMSS 299
Query: 299 AIYNPVIYIMMNKQFRN-CMLTTICC-GKNPLGDDEASATVSKTETSQV 345
+YNP+IY +N +FR+ L CC P +D+ T + + +++V
Sbjct: 300 TMYNPIIYCCLNHRFRSGFRLAFRCCPWVTPTKEDKLELTPTTSLSTRV 348
>gi|4557859 somatostatin receptor 2 [Homo sapiens]
Length = 369
Score = 108 bits (269), Expect = 9e-24
Identities = 87/326 (26%), Positives = 155/326 (47%), Gaps = 37/326 (11%)
Query: 38 SMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVAD-LFMVLGGFTSTLY 96
++L F++ ++G N L +YV +++ K++T N +LNLA+AD LFM+ F +
Sbjct: 44 AVLTFIYFVVCIIGLCGNTLVIYVILRYAKMKTITNIYILNLAIADELFMLGLPFLAMQV 103
Query: 97 TSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGE-NHAIM 155
+H + FG C + + +++ L V++I+RY+ V P+ + ++ A M
Sbjct: 104 ALVH--WPFGKAICRVVMTVDGINQFTSIFCLTVMSIDRYLAVVHPIKSAKWRRPRTAKM 161
Query: 156 GVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGID-------YYTLKPEVNNESFVIYMF 208
W ++L P + + + SC I+ +YT F+IY F
Sbjct: 162 ITMAVWGVSLLVILPIMIYAGLRSNQWGRSSCTINWPGESGAWYT--------GFIIYTF 213
Query: 209 VVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPY 268
++ F +P+ II CY ++ VK + + S+ +K+EK+VTRMV I+V F+ CW+P
Sbjct: 214 ILGFLVPLTIICLCYLFIIIKVKSSGI-RVGSSKRKKSEKKVTRMVSIVVAVFIFCWLP- 271
Query: 269 ASVAFYIFTHQGSNF---------GPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLT 319
FYIF + G + +A S A NP++Y ++ F+
Sbjct: 272 ----FYIFNVSSVSMAISPTPALKGMFDFVVVLTYANSCA--NPILYAFLSDNFKKSFQN 325
Query: 320 TICCGKNPLGDDEASATVSKTETSQV 345
+C K G D+ + SK + S++
Sbjct: 326 VLCLVK-VSGTDDGERSDSKQDKSRL 350
>gi|7669548 tachykinin receptor 3 [Homo sapiens]
Length = 465
Score = 106 bits (264), Expect = 4e-23
Identities = 70/294 (23%), Positives = 137/294 (46%), Gaps = 16/294 (5%)
Query: 30 YLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLG 89
++ W+ ++ + +++ + N + +++ + HK++RT NY L+NLA +D M
Sbjct: 78 FVQPSWRIALWSLAYGVVVAVAVLGNLIVIWIILAHKRMRTVTNYFLVNLAFSDASMAAF 137
Query: 90 GFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFG 149
+LH + FG C + FF +++S+ +A++RY+ + P+ R
Sbjct: 138 NTLVNFIYALHSEWYFGANYCRFQNFFPITAVFASIYSMTAIAVDRYMAIIDPLKP-RLS 196
Query: 150 ENHAIMGVAFTWVMALACAAPP-LAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMF 208
+ + W++A A P L ++ +P C + PE + F ++
Sbjct: 197 ATATKIVIGSIWILAFLLAFPQCLYSKTKVMPGRTLC------FVQWPEGPKQHFTYHII 250
Query: 209 VV--HFTIPMIIIFFCYGQLVFTV--KEAAAQQQESATTQ-KAEKEVTRMVIIMVIAFLI 263
V+ + P++I+ Y + T+ E + Q KA+++V +M+II+V+ F I
Sbjct: 251 VIILVYCFPLLIMGITYTIVGITLWGGEIPGDTCDKYHEQLKAKRKVVKMMIIVVMTFAI 310
Query: 264 CWVPYASVAFYIFTHQGSNFGPIFMTI---PAFFAKSAAIYNPVIYIMMNKQFR 314
CW+PY +Q N + + A S+ +YNP+IY +NK+FR
Sbjct: 311 CWLPYHIYFILTAIYQQLNRWKYIQQVYLASFWLAMSSTMYNPIIYCCLNKRFR 364
>gi|4507343 tachykinin receptor 1 isoform long [Homo sapiens]
Length = 407
Score = 104 bits (260), Expect = 1e-22
Identities = 69/297 (23%), Positives = 141/297 (47%), Gaps = 14/297 (4%)
Query: 27 PQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFM 86
P ++ WQ + AA +++V N + +++ + HK++RT NY L+NLA A+ M
Sbjct: 22 PNQFVQPAWQIVLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASM 81
Query: 87 VLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNF 146
++H + +G C FF +++S+ +A +RY+ + P+
Sbjct: 82 AAFNTVVNFTYAVHNEWYYGLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHPLQP- 140
Query: 147 RFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIY 206
R + + WV+AL A P +S + C I++ ++ + + I
Sbjct: 141 RLSATATKVVICVIWVLALLLAFPQ-GYYSTTETMPSRVVCMIEWPEHPNKIYEKVYHIC 199
Query: 207 MFVVHFTIPMIIIFFCYGQLVFTV--KEAAAQQQESATTQ-KAEKEVTRMVIIMVIAFLI 263
+ V+ + +P+++I + Y + T+ E + Q A+++V +M+I++V F I
Sbjct: 200 VTVLIYFLPLLVIGYAYTVVGITLWASEIPGDSSDRYHEQVSAKRKVVKMMIVVVCTFAI 259
Query: 264 CWVPYASVAFYIFTHQGSN------FGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFR 314
CW+P+ F++ + + +++ I + A S+ +YNP+IY +N +FR
Sbjct: 260 CWLPFH--IFFLLPYINPDLYLKKFIQQVYLAI-MWLAMSSTMYNPIIYCCLNDRFR 313
>gi|4505445 neuropeptide Y receptor Y1 [Homo sapiens]
Length = 384
Score = 103 bits (257), Expect = 2e-22
Identities = 85/347 (24%), Positives = 158/347 (45%), Gaps = 28/347 (8%)
Query: 24 FEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVAD 83
FE +L F++ AY +I+LG N + + ++ K++R N +++NL+ +D
Sbjct: 28 FENDDCHLPLAMIFTLALAYG-AVIILGVSGNLALIIIILKQKEMRNVTNILIVNLSFSD 86
Query: 84 LFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPM 143
L + + T +L ++VFG C L F + ++++SLV++A+ER+ ++ P
Sbjct: 87 LLVAIMCLPFTFVYTLMDHWVFGEAMCKLNPFVQCVSITVSIFSLVLIAVERHQLIINP- 145
Query: 144 SNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLK-------- 195
+R HA +G+A WV+A+A + P L + E Q + +D Y K
Sbjct: 146 RGWRPNNRHAYVGIAVIWVLAVASSLPFLI-YQVMTDEPFQ-NVTLDAYKDKYVCFDQFP 203
Query: 196 PEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVK---EAAAQQQESATTQKAEKEVTR 252
+ + S+ + V+ + P+ IF CY ++ +K + +++ K +
Sbjct: 204 SDSHRLSYTTLLLVLQYFGPLCFIFICYFKIYIRLKRRNNMMDKMRDNKYRSSETKRINI 263
Query: 253 MVIIMVIAFLICWVPYASV-AFYIFTHQ---GSNFGPIFMTIPAFFAKSAAIYNPVIYIM 308
M++ +V+AF +CW+P + + HQ N +F+ + A + NP+ Y
Sbjct: 264 MLLSIVVAFAVCWLPLTIFNTVFDWNHQIIATCNHNLLFL-LCHLTAMISTCVNPIFYGF 322
Query: 309 MNKQF-RNCMLTTICCGKNPLGDDEAS-------ATVSKTETSQVAP 347
+NK F R+ C DD + VSKT Q +P
Sbjct: 323 LNKNFQRDLQFFFNFCDFRSRDDDYETIAMSTMHTDVSKTSLKQASP 369
>gi|188497623 neuromedin U receptor 1 [Homo sapiens]
Length = 426
Score = 101 bits (251), Expect = 1e-21
Identities = 86/327 (26%), Positives = 148/327 (45%), Gaps = 51/327 (15%)
Query: 37 FSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLY 96
F + A L+ V+G N LT V ++HK +RTP NY L +LAV+DL ++L G LY
Sbjct: 60 FMPICATYLLIFVVGAVGNGLTCLVILRHKAMRTPTNYYLFSLAVSDLLVLLVGLPLELY 119
Query: 97 TSLHGY-FVFGPTGCNLEGFFATLGGEI----ALWSLVVLAIERYVVVCKPM-SNFRFGE 150
H Y F+ G GC +F TL E+ ++ ++ L++ERYV V P+ +
Sbjct: 120 EMWHNYPFLLGVGGC----YFRTLLFEMVCLASVLNVTALSVERYVAVVHPLQARSMVTR 175
Query: 151 NHAIMGVAFTWVMALACAAP--PLAGWSRY-------IPEGLQCSCGIDYYTLKPEVNNE 201
H + W +A+ C+ P L G + +P+ C ++P
Sbjct: 176 AHVRRVLGAVWGLAMLCSLPNTSLHGIRQLHVPCRGPVPDSAVC------MLVRPRALYN 229
Query: 202 SFVIYMFVVHFTIPMIIIFFCY--------GQLVFTVKEAAAQQQESATTQ--------- 244
V ++ F +PM I+ Y + + ++EA + +A ++
Sbjct: 230 MVVQTTALLFFCLPMAIMSVLYLLIGLRLRRERLLLMQEAKGRGSAAARSRYTCRLQQHD 289
Query: 245 KAEKEVTRMVIIMVIAFLICWVPYAS--VAFYIFTHQGSNFGPIFMTIPA-----FFAKS 297
+ ++VT+M+ ++V+ F ICW P+ + V + + + F + F+ S
Sbjct: 290 RGRRQVTKMLFVLVVVFGICWAPFHADRVMWSVVSQWTDGLHLAFQHVHVISGIFFYLGS 349
Query: 298 AAIYNPVIYIMMNKQFRNCMLTTICCG 324
AA NPV+Y +M+ +FR +C G
Sbjct: 350 AA--NPVLYSLMSSRFRETFQEALCLG 374
>gi|223718055 opioid receptor, mu 1 isoform MOR-1H [Homo sapiens]
Length = 493
Score = 100 bits (249), Expect = 2e-21
Identities = 72/286 (25%), Positives = 133/286 (46%), Gaps = 19/286 (6%)
Query: 40 LAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTL---- 95
+ A ++ V+G NFL +YV V++ K++T N + NLA+AD TSTL
Sbjct: 166 IMALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALA-----TSTLPFQS 220
Query: 96 YTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMS--NFRFGENHA 153
L G + FG C + ++++L ++++RY+ VC P+ +FR N
Sbjct: 221 VNYLMGTWPFGTILCKIVISIDYYNMFTSIFTLCTMSVDRYIAVCHPVKALDFRTPRNAK 280
Query: 154 IMGVAFTWVMALACAAPPL-AGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHF 212
I+ V W+++ A P + ++Y + C+ + T E I +F+ F
Sbjct: 281 IINVC-NWILSSAIGLPVMFMATTKYRQGSIDCTLTFSHPTWYWE---NLLKICVFIFAF 336
Query: 213 TIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVA 272
+P++II CYG ++ +K + S + + +TRMV+++V F++CW P
Sbjct: 337 IMPVLIITVCYGLMILRLK-SVRMLSGSKEKDRNLRRITRMVLVVVAVFIVCWTPIHIYV 395
Query: 273 FY--IFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNC 316
+ T + F + + + NPV+Y +++ F+ C
Sbjct: 396 IIKALVTIPETTFQTVSWHFCIALGYTNSCLNPVLYAFLDENFKRC 441
>gi|117940060 opioid receptor, mu 1 isoform MOR-1 [Homo sapiens]
Length = 400
Score = 100 bits (249), Expect = 2e-21
Identities = 72/286 (25%), Positives = 133/286 (46%), Gaps = 19/286 (6%)
Query: 40 LAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTL---- 95
+ A ++ V+G NFL +YV V++ K++T N + NLA+AD TSTL
Sbjct: 73 IMALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALA-----TSTLPFQS 127
Query: 96 YTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMS--NFRFGENHA 153
L G + FG C + ++++L ++++RY+ VC P+ +FR N
Sbjct: 128 VNYLMGTWPFGTILCKIVISIDYYNMFTSIFTLCTMSVDRYIAVCHPVKALDFRTPRNAK 187
Query: 154 IMGVAFTWVMALACAAPPL-AGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHF 212
I+ V W+++ A P + ++Y + C+ + T E I +F+ F
Sbjct: 188 IINVC-NWILSSAIGLPVMFMATTKYRQGSIDCTLTFSHPTWYWE---NLLKICVFIFAF 243
Query: 213 TIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVA 272
+P++II CYG ++ +K + S + + +TRMV+++V F++CW P
Sbjct: 244 IMPVLIITVCYGLMILRLK-SVRMLSGSKEKDRNLRRITRMVLVVVAVFIVCWTPIHIYV 302
Query: 273 FY--IFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNC 316
+ T + F + + + NPV+Y +++ F+ C
Sbjct: 303 IIKALVTIPETTFQTVSWHFCIALGYTNSCLNPVLYAFLDENFKRC 348
>gi|223718712 opioid receptor, mu 1 isoform MOR-1B5 [Homo sapiens]
Length = 420
Score = 100 bits (249), Expect = 2e-21
Identities = 72/286 (25%), Positives = 133/286 (46%), Gaps = 19/286 (6%)
Query: 40 LAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTL---- 95
+ A ++ V+G NFL +YV V++ K++T N + NLA+AD TSTL
Sbjct: 73 IMALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALA-----TSTLPFQS 127
Query: 96 YTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMS--NFRFGENHA 153
L G + FG C + ++++L ++++RY+ VC P+ +FR N
Sbjct: 128 VNYLMGTWPFGTILCKIVISIDYYNMFTSIFTLCTMSVDRYIAVCHPVKALDFRTPRNAK 187
Query: 154 IMGVAFTWVMALACAAPPL-AGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHF 212
I+ V W+++ A P + ++Y + C+ + T E I +F+ F
Sbjct: 188 IINVC-NWILSSAIGLPVMFMATTKYRQGSIDCTLTFSHPTWYWE---NLLKICVFIFAF 243
Query: 213 TIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVA 272
+P++II CYG ++ +K + S + + +TRMV+++V F++CW P
Sbjct: 244 IMPVLIITVCYGLMILRLK-SVRMLSGSKEKDRNLRRITRMVLVVVAVFIVCWTPIHIYV 302
Query: 273 FY--IFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNC 316
+ T + F + + + NPV+Y +++ F+ C
Sbjct: 303 IIKALVTIPETTFQTVSWHFCIALGYTNSCLNPVLYAFLDENFKRC 348
>gi|223718719 opioid receptor, mu 1 isoform MOR-1B2 [Homo sapiens]
Length = 397
Score = 100 bits (249), Expect = 2e-21
Identities = 72/286 (25%), Positives = 133/286 (46%), Gaps = 19/286 (6%)
Query: 40 LAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTL---- 95
+ A ++ V+G NFL +YV V++ K++T N + NLA+AD TSTL
Sbjct: 73 IMALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALA-----TSTLPFQS 127
Query: 96 YTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMS--NFRFGENHA 153
L G + FG C + ++++L ++++RY+ VC P+ +FR N
Sbjct: 128 VNYLMGTWPFGTILCKIVISIDYYNMFTSIFTLCTMSVDRYIAVCHPVKALDFRTPRNAK 187
Query: 154 IMGVAFTWVMALACAAPPL-AGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHF 212
I+ V W+++ A P + ++Y + C+ + T E I +F+ F
Sbjct: 188 IINVC-NWILSSAIGLPVMFMATTKYRQGSIDCTLTFSHPTWYWE---NLLKICVFIFAF 243
Query: 213 TIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVA 272
+P++II CYG ++ +K + S + + +TRMV+++V F++CW P
Sbjct: 244 IMPVLIITVCYGLMILRLK-SVRMLSGSKEKDRNLRRITRMVLVVVAVFIVCWTPIHIYV 302
Query: 273 FY--IFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNC 316
+ T + F + + + NPV+Y +++ F+ C
Sbjct: 303 IIKALVTIPETTFQTVSWHFCIALGYTNSCLNPVLYAFLDENFKRC 348
>gi|223718077 opioid receptor, mu 1 isoform MOR-1B3 [Homo sapiens]
Length = 403
Score = 100 bits (249), Expect = 2e-21
Identities = 72/286 (25%), Positives = 133/286 (46%), Gaps = 19/286 (6%)
Query: 40 LAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTL---- 95
+ A ++ V+G NFL +YV V++ K++T N + NLA+AD TSTL
Sbjct: 73 IMALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALA-----TSTLPFQS 127
Query: 96 YTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMS--NFRFGENHA 153
L G + FG C + ++++L ++++RY+ VC P+ +FR N
Sbjct: 128 VNYLMGTWPFGTILCKIVISIDYYNMFTSIFTLCTMSVDRYIAVCHPVKALDFRTPRNAK 187
Query: 154 IMGVAFTWVMALACAAPPL-AGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHF 212
I+ V W+++ A P + ++Y + C+ + T E I +F+ F
Sbjct: 188 IINVC-NWILSSAIGLPVMFMATTKYRQGSIDCTLTFSHPTWYWE---NLLKICVFIFAF 243
Query: 213 TIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVA 272
+P++II CYG ++ +K + S + + +TRMV+++V F++CW P
Sbjct: 244 IMPVLIITVCYGLMILRLK-SVRMLSGSKEKDRNLRRITRMVLVVVAVFIVCWTPIHIYV 302
Query: 273 FY--IFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNC 316
+ T + F + + + NPV+Y +++ F+ C
Sbjct: 303 IIKALVTIPETTFQTVSWHFCIALGYTNSCLNPVLYAFLDENFKRC 348
>gi|223718716 opioid receptor, mu 1 isoform MOR-1B1 [Homo sapiens]
Length = 406
Score = 100 bits (249), Expect = 2e-21
Identities = 72/286 (25%), Positives = 133/286 (46%), Gaps = 19/286 (6%)
Query: 40 LAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTL---- 95
+ A ++ V+G NFL +YV V++ K++T N + NLA+AD TSTL
Sbjct: 73 IMALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALA-----TSTLPFQS 127
Query: 96 YTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMS--NFRFGENHA 153
L G + FG C + ++++L ++++RY+ VC P+ +FR N
Sbjct: 128 VNYLMGTWPFGTILCKIVISIDYYNMFTSIFTLCTMSVDRYIAVCHPVKALDFRTPRNAK 187
Query: 154 IMGVAFTWVMALACAAPPL-AGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHF 212
I+ V W+++ A P + ++Y + C+ + T E I +F+ F
Sbjct: 188 IINVC-NWILSSAIGLPVMFMATTKYRQGSIDCTLTFSHPTWYWE---NLLKICVFIFAF 243
Query: 213 TIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVA 272
+P++II CYG ++ +K + S + + +TRMV+++V F++CW P
Sbjct: 244 IMPVLIITVCYGLMILRLK-SVRMLSGSKEKDRNLRRITRMVLVVVAVFIVCWTPIHIYV 302
Query: 273 FY--IFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNC 316
+ T + F + + + NPV+Y +++ F+ C
Sbjct: 303 IIKALVTIPETTFQTVSWHFCIALGYTNSCLNPVLYAFLDENFKRC 348
>gi|7669546 tachykinin receptor 1 isoform short [Homo sapiens]
Length = 311
Score = 100 bits (249), Expect = 2e-21
Identities = 67/293 (22%), Positives = 138/293 (47%), Gaps = 14/293 (4%)
Query: 27 PQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFM 86
P ++ WQ + AA +++V N + +++ + HK++RT NY L+NLA A+ M
Sbjct: 22 PNQFVQPAWQIVLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASM 81
Query: 87 VLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNF 146
++H + +G C FF +++S+ +A +RY+ + P+
Sbjct: 82 AAFNTVVNFTYAVHNEWYYGLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHPLQP- 140
Query: 147 RFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIY 206
R + + WV+AL A P +S + C I++ ++ + + I
Sbjct: 141 RLSATATKVVICVIWVLALLLAFPQ-GYYSTTETMPSRVVCMIEWPEHPNKIYEKVYHIC 199
Query: 207 MFVVHFTIPMIIIFFCYGQLVFTV--KEAAAQQQESATTQ-KAEKEVTRMVIIMVIAFLI 263
+ V+ + +P+++I + Y + T+ E + Q A+++V +M+I++V F I
Sbjct: 200 VTVLIYFLPLLVIGYAYTVVGITLWASEIPGDSSDRYHEQVSAKRKVVKMMIVVVCTFAI 259
Query: 264 CWVPYASVAFYIFTHQGSN------FGPIFMTIPAFFAKSAAIYNPVIYIMMN 310
CW+P+ F++ + + +++ I + A S+ +YNP+IY +N
Sbjct: 260 CWLPFH--IFFLLPYINPDLYLKKFIQQVYLAI-MWLAMSSTMYNPIIYCCLN 309
>gi|117940058 opioid receptor, mu 1 isoform MOR-1A [Homo sapiens]
Length = 392
Score = 100 bits (249), Expect = 2e-21
Identities = 72/286 (25%), Positives = 133/286 (46%), Gaps = 19/286 (6%)
Query: 40 LAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTL---- 95
+ A ++ V+G NFL +YV V++ K++T N + NLA+AD TSTL
Sbjct: 73 IMALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALA-----TSTLPFQS 127
Query: 96 YTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMS--NFRFGENHA 153
L G + FG C + ++++L ++++RY+ VC P+ +FR N
Sbjct: 128 VNYLMGTWPFGTILCKIVISIDYYNMFTSIFTLCTMSVDRYIAVCHPVKALDFRTPRNAK 187
Query: 154 IMGVAFTWVMALACAAPPL-AGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHF 212
I+ V W+++ A P + ++Y + C+ + T E I +F+ F
Sbjct: 188 IINVC-NWILSSAIGLPVMFMATTKYRQGSIDCTLTFSHPTWYWE---NLLKICVFIFAF 243
Query: 213 TIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVA 272
+P++II CYG ++ +K + S + + +TRMV+++V F++CW P
Sbjct: 244 IMPVLIITVCYGLMILRLK-SVRMLSGSKEKDRNLRRITRMVLVVVAVFIVCWTPIHIYV 302
Query: 273 FY--IFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNC 316
+ T + F + + + NPV+Y +++ F+ C
Sbjct: 303 IIKALVTIPETTFQTVSWHFCIALGYTNSCLNPVLYAFLDENFKRC 348
>gi|223717969 opioid receptor, mu 1 isoform MOR-1B4 [Homo sapiens]
Length = 389
Score = 100 bits (249), Expect = 2e-21
Identities = 72/286 (25%), Positives = 133/286 (46%), Gaps = 19/286 (6%)
Query: 40 LAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTL---- 95
+ A ++ V+G NFL +YV V++ K++T N + NLA+AD TSTL
Sbjct: 73 IMALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALA-----TSTLPFQS 127
Query: 96 YTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMS--NFRFGENHA 153
L G + FG C + ++++L ++++RY+ VC P+ +FR N
Sbjct: 128 VNYLMGTWPFGTILCKIVISIDYYNMFTSIFTLCTMSVDRYIAVCHPVKALDFRTPRNAK 187
Query: 154 IMGVAFTWVMALACAAPPL-AGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHF 212
I+ V W+++ A P + ++Y + C+ + T E I +F+ F
Sbjct: 188 IINVC-NWILSSAIGLPVMFMATTKYRQGSIDCTLTFSHPTWYWE---NLLKICVFIFAF 243
Query: 213 TIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVA 272
+P++II CYG ++ +K + S + + +TRMV+++V F++CW P
Sbjct: 244 IMPVLIITVCYGLMILRLK-SVRMLSGSKEKDRNLRRITRMVLVVVAVFIVCWTPIHIYV 302
Query: 273 FY--IFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNC 316
+ T + F + + + NPV+Y +++ F+ C
Sbjct: 303 IIKALVTIPETTFQTVSWHFCIALGYTNSCLNPVLYAFLDENFKRC 348
>gi|150170722 G protein-coupled receptor 50 [Homo sapiens]
Length = 617
Score = 100 bits (249), Expect = 2e-21
Identities = 76/328 (23%), Positives = 141/328 (42%), Gaps = 18/328 (5%)
Query: 6 GPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQH 65
GP VP G + P+Y P + M + IV+ N + + ++
Sbjct: 2 GPTLAVP--TPYGCIGCKLPQPEY---PPALIIFMFCAMVITIVVDLIGNSMVILAVTKN 56
Query: 66 KKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIAL 125
KKLR N +++L+VAD+ + + + L+ G + C + GF L ++
Sbjct: 57 KKLRNSGNIFVVSLSVADMLVAIYPYPLMLHAMSIGGWDLSQLQCQMVGFITGLSVVGSI 116
Query: 126 WSLVVLAIERYVVVCKPMSNFR-FGENHAIMGVAFTWVMALACAAPPL-AGWSRYIPEGL 183
+++V +AI RY +C + R F + + + TW+M + P + G Y P
Sbjct: 117 FNIVAIAINRYCYICHSLQYERIFSVRNTCIYLVITWIMTVLAVLPNMYIGTIEYDPRTY 176
Query: 184 QCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATT 243
C + +NN F + + +HF +P++I+ FCY ++ V A ++
Sbjct: 177 TC--------IFNYLNNPVFTVTIVCIHFVLPLLIVGFCYVRIWTKVLAARDPAGQNPDN 228
Query: 244 QKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFG--PIFMTIPAFF-AKSAAI 300
Q AE + ++ + F +CW P + + G P ++ + A+F A +
Sbjct: 229 QLAEVRNFLTMFVIFLLFAVCWCPINVLTVLVAVSPKEMAGKIPNWLYLAAYFIAYFNSC 288
Query: 301 YNPVIYIMMNKQFRNCMLTTICCGKNPL 328
N VIY ++N+ FR T ++P+
Sbjct: 289 LNAVIYGLLNENFRREYWTIFHAMRHPI 316
>gi|117940055 opioid receptor, mu 1 isoform MOR-1O [Homo sapiens]
Length = 418
Score = 100 bits (249), Expect = 2e-21
Identities = 72/286 (25%), Positives = 133/286 (46%), Gaps = 19/286 (6%)
Query: 40 LAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTL---- 95
+ A ++ V+G NFL +YV V++ K++T N + NLA+AD TSTL
Sbjct: 73 IMALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALA-----TSTLPFQS 127
Query: 96 YTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMS--NFRFGENHA 153
L G + FG C + ++++L ++++RY+ VC P+ +FR N
Sbjct: 128 VNYLMGTWPFGTILCKIVISIDYYNMFTSIFTLCTMSVDRYIAVCHPVKALDFRTPRNAK 187
Query: 154 IMGVAFTWVMALACAAPPL-AGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHF 212
I+ V W+++ A P + ++Y + C+ + T E I +F+ F
Sbjct: 188 IINVC-NWILSSAIGLPVMFMATTKYRQGSIDCTLTFSHPTWYWE---NLLKICVFIFAF 243
Query: 213 TIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVA 272
+P++II CYG ++ +K + S + + +TRMV+++V F++CW P
Sbjct: 244 IMPVLIITVCYGLMILRLK-SVRMLSGSKEKDRNLRRITRMVLVVVAVFIVCWTPIHIYV 302
Query: 273 FY--IFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNC 316
+ T + F + + + NPV+Y +++ F+ C
Sbjct: 303 IIKALVTIPETTFQTVSWHFCIALGYTNSCLNPVLYAFLDENFKRC 348
>gi|117940054 opioid receptor, mu 1 isoform MOR-1X [Homo sapiens]
Length = 446
Score = 100 bits (249), Expect = 2e-21
Identities = 72/286 (25%), Positives = 133/286 (46%), Gaps = 19/286 (6%)
Query: 40 LAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTL---- 95
+ A ++ V+G NFL +YV V++ K++T N + NLA+AD TSTL
Sbjct: 73 IMALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALA-----TSTLPFQS 127
Query: 96 YTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMS--NFRFGENHA 153
L G + FG C + ++++L ++++RY+ VC P+ +FR N
Sbjct: 128 VNYLMGTWPFGTILCKIVISIDYYNMFTSIFTLCTMSVDRYIAVCHPVKALDFRTPRNAK 187
Query: 154 IMGVAFTWVMALACAAPPL-AGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHF 212
I+ V W+++ A P + ++Y + C+ + T E I +F+ F
Sbjct: 188 IINVC-NWILSSAIGLPVMFMATTKYRQGSIDCTLTFSHPTWYWE---NLLKICVFIFAF 243
Query: 213 TIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVA 272
+P++II CYG ++ +K + S + + +TRMV+++V F++CW P
Sbjct: 244 IMPVLIITVCYGLMILRLK-SVRMLSGSKEKDRNLRRITRMVLVVVAVFIVCWTPIHIYV 302
Query: 273 FY--IFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNC 316
+ T + F + + + NPV+Y +++ F+ C
Sbjct: 303 IIKALVTIPETTFQTVSWHFCIALGYTNSCLNPVLYAFLDENFKRC 348
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.328 0.140 0.444
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,163,762
Number of Sequences: 37866
Number of extensions: 483083
Number of successful extensions: 2995
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 374
Number of HSP's successfully gapped in prelim test: 344
Number of HSP's that attempted gapping in prelim test: 1548
Number of HSP's gapped (non-prelim): 948
length of query: 348
length of database: 18,247,518
effective HSP length: 103
effective length of query: 245
effective length of database: 14,347,320
effective search space: 3515093400
effective search space used: 3515093400
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.