Search of human proteins with 4506363

Search of human proteins with 4506363

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4506363 RAB13, member RAS oncogene family [Homo sapiens]
         (203 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4506363 RAB13, member RAS oncogene family [Homo sapiens]           407   e-114
gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene fa...   396   e-111
gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens]            396   e-111
gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens]            396   e-111
gi|7706563 RAB8B, member RAS oncogene family [Homo sapiens]           272   2e-73
gi|16933567 mel transforming oncogene [Homo sapiens]                  266   1e-71
gi|33695095 ras-related GTP-binding protein RAB10 [Homo sapiens]      253   1e-67
gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo sap...   218   2e-57
gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens]          217   5e-57
gi|5803135 RAB35, member RAS oncogene family [Homo sapiens]           201   5e-52
gi|46361978 RAB26, member RAS oncogene family [Homo sapiens]          191   5e-49
gi|19923985 RAB3C, member RAS oncogene family [Homo sapiens]          189   1e-48
gi|4506367 RAB3A, member RAS oncogene family [Homo sapiens]           187   5e-48
gi|19923750 RAB3B, member RAS oncogene family [Homo sapiens]          186   2e-47
gi|21361884 RAB2B protein isoform 1 [Homo sapiens]                    185   3e-47
gi|4506365 RAB2A, member RAS oncogene family [Homo sapiens]           184   3e-47
gi|4759000 RAB3D, member RAS oncogene family [Homo sapiens]           184   4e-47
gi|54859685 RAB37, member RAS oncogene family isoform 2 [Homo sa...   184   6e-47
gi|106507164 RAB12, member RAS oncogene family [Homo sapiens]         181   4e-46
gi|50234889 RAB43 protein [Homo sapiens]                              176   9e-45
gi|239915976 RAB19, member RAS oncogene family [Homo sapiens]         174   5e-44
gi|190358517 RAB11B, member RAS oncogene family [Homo sapiens]        173   8e-44
gi|4758984 Ras-related protein Rab-11A [Homo sapiens]                 173   8e-44
gi|28376635 RAB37, member RAS oncogene family isoform 3 [Homo sa...   172   1e-43
gi|25188193 RAB39B, member RAS oncogene family [Homo sapiens]         170   9e-43
gi|21361418 RAB30, member RAS oncogene family [Homo sapiens]          168   3e-42
gi|82659107 ras-related GTP-binding protein 4b [Homo sapiens]         165   2e-41
gi|19923260 RAB4A, member RAS oncogene family [Homo sapiens]          164   4e-41
gi|19923483 GTPase Rab14 [Homo sapiens]                               163   8e-41
gi|5729997 RAB27B, member RAS oncogene family [Homo sapiens]          162   1e-40

>gi|4506363 RAB13, member RAS oncogene family [Homo sapiens]
          Length = 203

 Score =  407 bits (1046), Expect = e-114
 Identities = 203/203 (100%), Positives = 203/203 (100%)

Query: 1   MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQ 60
           MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQ
Sbjct: 1   MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQ 60

Query: 61  VWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLG 120
           VWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLG
Sbjct: 61  VWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLG 120

Query: 121 NKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGN 180
           NKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGN
Sbjct: 121 NKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGN 180

Query: 181 GNKPPSTDLKTCDKKNTNKCSLG 203
           GNKPPSTDLKTCDKKNTNKCSLG
Sbjct: 181 GNKPPSTDLKTCDKKNTNKCSLG 203


>gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene
           family [Homo sapiens]
          Length = 327

 Score =  396 bits (1017), Expect = e-111
 Identities = 198/202 (98%), Positives = 198/202 (98%)

Query: 1   MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQ 60
           MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQ
Sbjct: 125 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQ 184

Query: 61  VWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLG 120
           VWDTAGQERFKTITTAYYRGAMGIIL YDITDEKSFENIQNWMKSI ENASAGVE LLLG
Sbjct: 185 VWDTAGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLG 244

Query: 121 NKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGN 180
           NKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGN
Sbjct: 245 NKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGN 304

Query: 181 GNKPPSTDLKTCDKKNTNKCSL 202
           GNKPPSTDLKTCD KNTNKCSL
Sbjct: 305 GNKPPSTDLKTCDIKNTNKCSL 326


>gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens]
          Length = 327

 Score =  396 bits (1017), Expect = e-111
 Identities = 198/202 (98%), Positives = 198/202 (98%)

Query: 1   MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQ 60
           MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQ
Sbjct: 125 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQ 184

Query: 61  VWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLG 120
           VWDTAGQERFKTITTAYYRGAMGIIL YDITDEKSFENIQNWMKSI ENASAGVE LLLG
Sbjct: 185 VWDTAGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLG 244

Query: 121 NKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGN 180
           NKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGN
Sbjct: 245 NKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGN 304

Query: 181 GNKPPSTDLKTCDKKNTNKCSL 202
           GNKPPSTDLKTCD KNTNKCSL
Sbjct: 305 GNKPPSTDLKTCDIKNTNKCSL 326


>gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens]
          Length = 327

 Score =  396 bits (1017), Expect = e-111
 Identities = 198/202 (98%), Positives = 198/202 (98%)

Query: 1   MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQ 60
           MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQ
Sbjct: 125 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQ 184

Query: 61  VWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLG 120
           VWDTAGQERFKTITTAYYRGAMGIIL YDITDEKSFENIQNWMKSI ENASAGVE LLLG
Sbjct: 185 VWDTAGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLG 244

Query: 121 NKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGN 180
           NKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGN
Sbjct: 245 NKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGN 304

Query: 181 GNKPPSTDLKTCDKKNTNKCSL 202
           GNKPPSTDLKTCD KNTNKCSL
Sbjct: 305 GNKPPSTDLKTCDIKNTNKCSL 326


>gi|7706563 RAB8B, member RAS oncogene family [Homo sapiens]
          Length = 207

 Score =  272 bits (695), Expect = 2e-73
 Identities = 131/206 (63%), Positives = 171/206 (83%), Gaps = 4/206 (1%)

Query: 1   MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQ 60
           MAK YD+LFKLLLIGDSGVGKTCL+ RF+ED FN T+ISTIGIDFKIRT++++GKKIKLQ
Sbjct: 1   MAKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQ 60

Query: 61  VWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLG 120
           +WDTAGQERF+TITTAYYRGAMGI+LVYDIT+EKSF+NI+NW+++I+E+AS+ VER++LG
Sbjct: 61  IWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILG 120

Query: 121 NKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGN 180
           NKCDM  KR+V KE+ +KLA ++GI+F ETSAKSS NV+EAF +LARDI+ K   + + +
Sbjct: 121 NKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLARDIMTKLNRKMNDS 180

Query: 181 GNKPPSTDLKTCDKKNTN----KCSL 202
            +      +K  + ++      +CSL
Sbjct: 181 NSAGAGGPVKITENRSKKTSFFRCSL 206


>gi|16933567 mel transforming oncogene [Homo sapiens]
          Length = 207

 Score =  266 bits (679), Expect = 1e-71
 Identities = 124/190 (65%), Positives = 165/190 (86%)

Query: 1   MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQ 60
           MAK YD+LFKLLLIGDSGVGKTC++ RF+ED FN+T+ISTIGIDFKIRT++++GK+IKLQ
Sbjct: 1   MAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQ 60

Query: 61  VWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLG 120
           +WDTAGQERF+TITTAYYRGAMGI+LVYDIT+EKSF+NI+NW+++I+E+ASA VE+++LG
Sbjct: 61  IWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILG 120

Query: 121 NKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGN 180
           NKCD+  KR+V KE+ +KLA ++GI+F ETSAK+++NV+ AF +LARDI  K   +  GN
Sbjct: 121 NKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGN 180

Query: 181 GNKPPSTDLK 190
             +  +  +K
Sbjct: 181 SPQGSNQGVK 190


>gi|33695095 ras-related GTP-binding protein RAB10 [Homo sapiens]
          Length = 200

 Score =  253 bits (645), Expect = 1e-67
 Identities = 120/180 (66%), Positives = 153/180 (85%)

Query: 3   KAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVW 62
           K YD LFKLLLIGDSGVGKTC++ RF++D FN T+ISTIGIDFKI+TV+++GKKIKLQ+W
Sbjct: 4   KTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIW 63

Query: 63  DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNK 122
           DTAGQERF TITT+YYRGAMGI+LVYDIT+ KSFENI  W+++I E+A+  VER+LLGNK
Sbjct: 64  DTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNK 123

Query: 123 CDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGNGN 182
           CDM+ KR V K +  ++AREHGIRFFETSAK+++N+++AF +LA DIL K+  +   + N
Sbjct: 124 CDMDDKRVVPKGKGGQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSEN 183


>gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo
           sapiens]
          Length = 205

 Score =  218 bits (556), Expect = 2e-57
 Identities = 101/197 (51%), Positives = 146/197 (74%)

Query: 1   MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQ 60
           M   YD+LFKLLLIGDSGVGK+CL++RFA+D +  +YISTIG+DFKIRT++++GK IKLQ
Sbjct: 4   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 63

Query: 61  VWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLG 120
           +WDTAGQERF+TIT++YYRGA GII+VYD+TD++SF N++ W++ I   AS  V +LL+G
Sbjct: 64  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG 123

Query: 121 NKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGN 180
           NKCD+  K+ V    A + A   GI F ETSAK++ NV+++F ++A +I  + G   +  
Sbjct: 124 NKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAG 183

Query: 181 GNKPPSTDLKTCDKKNT 197
           G +  +  +++   K +
Sbjct: 184 GAEKSNVKIQSTPVKQS 200


>gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens]
          Length = 201

 Score =  217 bits (553), Expect = 5e-57
 Identities = 100/184 (54%), Positives = 140/184 (76%)

Query: 1   MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQ 60
           M   YD+LFKLLLIGDSGVGK+CL++RFA+D +  +YISTIG+DFKIRT++++GK IKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 60

Query: 61  VWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLG 120
           +WDTAGQERF+TIT++YYRGA GII+VYD+TD++S+ N++ W++ I   AS  V +LL+G
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVG 120

Query: 121 NKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGN 180
           NK D+  K+ V    A + A   GI F ETSAK++ NV++AF ++A +I  + G   +  
Sbjct: 121 NKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASG 180

Query: 181 GNKP 184
           G +P
Sbjct: 181 GERP 184


>gi|5803135 RAB35, member RAS oncogene family [Homo sapiens]
          Length = 201

 Score =  201 bits (510), Expect = 5e-52
 Identities = 94/170 (55%), Positives = 132/170 (77%), Gaps = 1/170 (0%)

Query: 1   MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQ 60
           MA+ YDHLFKLL+IGDSGVGK+ L++RFA++ F+ +YI+TIG+DFKIRTV+I G+K+KLQ
Sbjct: 1   MARDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQ 60

Query: 61  VWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLG 120
           +WDTAGQERF+TIT+ YYRG  G+I+VYD+T  +SF N++ W+  I +N    V R+L+G
Sbjct: 61  IWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCD-DVCRILVG 119

Query: 121 NKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDIL 170
           NK D   ++ V+ E A K A + GI+ FETSAK ++NV+E F+ +   +L
Sbjct: 120 NKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVL 169


>gi|46361978 RAB26, member RAS oncogene family [Homo sapiens]
          Length = 256

 Score =  191 bits (484), Expect = 5e-49
 Identities = 88/170 (51%), Positives = 131/170 (77%), Gaps = 1/170 (0%)

Query: 5   YDHLFKLLLIGDSGVGKTCLIIRFAEDNF-NNTYISTIGIDFKIRTVDIEGKKIKLQVWD 63
           YD  FK++L+GDSGVGKTCL++RF +  F   T+IST+GIDF+ + +D++G K+KLQ+WD
Sbjct: 60  YDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWD 119

Query: 64  TAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKC 123
           TAGQERF+++T AYYR A  ++L+YD+T++ SF+NIQ W+  I E A   V  +LLGNK 
Sbjct: 120 TAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQHDVALMLLGNKV 179

Query: 124 DMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKS 173
           D   +R V++E  +KLA+E+G+ F ETSAK+ +NVD AF+++A+++  +S
Sbjct: 180 DSAHERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIAKELKQRS 229


>gi|19923985 RAB3C, member RAS oncogene family [Homo sapiens]
          Length = 227

 Score =  189 bits (481), Expect = 1e-48
 Identities = 86/161 (53%), Positives = 121/161 (75%)

Query: 5   YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDT 64
           +D++FKLL+IG+S VGKT  + R+A+D+F + ++ST+GIDFK++TV    K+IKLQ+WDT
Sbjct: 27  FDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQIWDT 86

Query: 65  AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCD 124
           AGQER++TITTAYYRGAMG IL+YDIT+E+SF  +Q+W   IK  +    + +L+GNKCD
Sbjct: 87  AGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILVGNKCD 146

Query: 125 MEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSL 165
           ME +R +  E+   L  + G  FFETSAK ++NV + F  L
Sbjct: 147 MEDERVISTERGQHLGEQLGFEFFETSAKDNINVKQTFERL 187


>gi|4506367 RAB3A, member RAS oncogene family [Homo sapiens]
          Length = 220

 Score =  187 bits (475), Expect = 5e-48
 Identities = 86/161 (53%), Positives = 120/161 (74%)

Query: 5   YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDT 64
           +D++FK+L+IG+S VGKT  + R+A+D+F   ++ST+GIDFK++T+    K+IKLQ+WDT
Sbjct: 19  FDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDT 78

Query: 65  AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCD 124
           AGQER++TITTAYYRGAMG IL+YDIT+E+SF  +Q+W   IK  +    + LL+GNKCD
Sbjct: 79  AGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCD 138

Query: 125 MEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSL 165
           ME +R V  E+  +LA   G  FFE SAK ++NV + F  L
Sbjct: 139 MEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERL 179


>gi|19923750 RAB3B, member RAS oncogene family [Homo sapiens]
          Length = 219

 Score =  186 bits (471), Expect = 2e-47
 Identities = 86/161 (53%), Positives = 120/161 (74%)

Query: 5   YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDT 64
           +D++FKLL+IG+S VGKT  + R+A+D F   ++ST+GIDFK++TV    K++KLQ+WDT
Sbjct: 19  FDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDT 78

Query: 65  AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCD 124
           AGQER++TITTAYYRGAMG IL+YDIT+E+SF  +Q+W   IK  +    + +L+GNKCD
Sbjct: 79  AGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNKCD 138

Query: 125 MEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSL 165
           ME +R V  E+   LA + G  FFE SAK +++V +AF  L
Sbjct: 139 MEEERVVPTEKGQLLAEQLGFDFFEASAKENISVRQAFERL 179


>gi|21361884 RAB2B protein isoform 1 [Homo sapiens]
          Length = 216

 Score =  185 bits (469), Expect = 3e-47
 Identities = 81/168 (48%), Positives = 130/168 (77%)

Query: 5   YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDT 64
           Y +LFK ++IGD+GVGK+CL+++F +  F   +  TIG++F  R V+I+GK+IKLQ+WDT
Sbjct: 3   YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDT 62

Query: 65  AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCD 124
           AGQE F++IT +YYRGA G +LVYDIT  ++F ++ +W++  ++++S+ +  +L+GNK D
Sbjct: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSD 122

Query: 125 MEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLK 172
           +E++R V++E+ +  AREHG+ F ETSAK++ NV+EAF + A++I  K
Sbjct: 123 LESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRK 170


>gi|4506365 RAB2A, member RAS oncogene family [Homo sapiens]
          Length = 212

 Score =  184 bits (468), Expect = 3e-47
 Identities = 81/169 (47%), Positives = 129/169 (76%)

Query: 4   AYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWD 63
           AY +LFK ++IGD+GVGK+CL+++F +  F   +  TIG++F  R + I+GK+IKLQ+WD
Sbjct: 2   AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 61

Query: 64  TAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKC 123
           TAGQE F++IT +YYRGA G +LVYDIT   +F ++  W++  ++++++ +  +L+GNK 
Sbjct: 62  TAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKS 121

Query: 124 DMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLK 172
           D+E++R+V+KE+ +  AREHG+ F ETSAK++ NV+EAF + A++I  K
Sbjct: 122 DLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEK 170


>gi|4759000 RAB3D, member RAS oncogene family [Homo sapiens]
          Length = 219

 Score =  184 bits (467), Expect = 4e-47
 Identities = 90/187 (48%), Positives = 127/187 (67%), Gaps = 5/187 (2%)

Query: 5   YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDT 64
           +D++FKLLLIG+S VGKT  + R+A+D+F   ++ST+GIDFK++TV    K+IKLQ+WDT
Sbjct: 19  FDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDT 78

Query: 65  AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCD 124
           AGQER++TITTAYYRGAMG +L+YDI +++SF  +Q+W   IK  +    + +L+GNKCD
Sbjct: 79  AGQERYRTITTAYYRGAMGFLLMYDIANQESFAAVQDWATQIKTYSWDNAQVILVGNKCD 138

Query: 125 MEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSG-----GRRSG 179
           +E +R V  E   +LA + G  FFE SAK ++NV + F  L   I  K          SG
Sbjct: 139 LEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERLVDVICEKMNESLEPSSSSG 198

Query: 180 NGNKPPS 186
           +  K P+
Sbjct: 199 SNGKGPA 205


>gi|54859685 RAB37, member RAS oncogene family isoform 2 [Homo
           sapiens]
          Length = 223

 Score =  184 bits (466), Expect = 6e-47
 Identities = 91/202 (45%), Positives = 140/202 (69%), Gaps = 9/202 (4%)

Query: 4   AYDHLFKLLLIGDSGVGKTCLIIRFAEDNF-NNTYISTIGIDFKIRTVDIEGKKIKLQVW 62
           +YD   K++L+GD+GVGKTC +I+F +  F + T+I+T+GIDF+ + V ++G ++KLQ+W
Sbjct: 25  SYDLTGKVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGVRVKLQIW 84

Query: 63  DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNK 122
           DTAGQERF+++T AYYR A  ++L+YDIT++ SF+NI+ W+  I E A   V  +LLGNK
Sbjct: 85  DTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNK 144

Query: 123 CDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGNGN 182
            DM ++R ++ E  + LARE+G+ F ETSAK+ MNV+ AF ++A+++       R+G+  
Sbjct: 145 ADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKELKY-----RAGHQA 199

Query: 183 KPPS---TDLKTCDKKNTNKCS 201
             PS    D     KK ++ CS
Sbjct: 200 DEPSFQIRDYVESQKKRSSCCS 221


>gi|106507164 RAB12, member RAS oncogene family [Homo sapiens]
          Length = 244

 Score =  181 bits (459), Expect = 4e-46
 Identities = 89/168 (52%), Positives = 121/168 (72%), Gaps = 1/168 (0%)

Query: 6   DHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTA 65
           D   ++++IG  GVGKT L+ RF +D F     ST+G+DFKI+TV++ GKKI+LQ+WDTA
Sbjct: 40  DFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTA 99

Query: 66  GQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDM 125
           GQERF +IT+AYYR A GIILVYDIT +++F+++  WMK I + AS   E LL+GNK D 
Sbjct: 100 GQERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDC 159

Query: 126 EAKRKVQKEQADKLARE-HGIRFFETSAKSSMNVDEAFSSLARDILLK 172
           E  R++ ++Q +K A++  G+RF E SAK + NVDE F  L  DIL K
Sbjct: 160 ETDREITRQQGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKK 207


>gi|50234889 RAB43 protein [Homo sapiens]
          Length = 212

 Score =  176 bits (447), Expect = 9e-45
 Identities = 83/172 (48%), Positives = 123/172 (71%), Gaps = 1/172 (0%)

Query: 5   YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDT 64
           YD LFKL+L+GD+ VGKTC++ RF    F+    STIG+DF ++T++I+GK++KLQ+WDT
Sbjct: 15  YDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDT 74

Query: 65  AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCD 124
           AGQERF+TIT +YYR A G IL YDIT   SF ++ +W++ +++ A + + +LL+GNK D
Sbjct: 75  AGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLLIGNKSD 134

Query: 125 MEAKRKVQKEQADKLAREHGIR-FFETSAKSSMNVDEAFSSLARDILLKSGG 175
           +   R+V   +A  LA  + I    ETSAK S NV+EAF  +A +++++ GG
Sbjct: 135 LSELREVSLAEAQSLAEHYDILCAIETSAKDSSNVEEAFLRVATELIMRHGG 186


>gi|239915976 RAB19, member RAS oncogene family [Homo sapiens]
          Length = 217

 Score =  174 bits (441), Expect = 5e-44
 Identities = 81/170 (47%), Positives = 122/170 (71%), Gaps = 1/170 (0%)

Query: 5   YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDT 64
           +D+LFK++LIGDS VGKTC++  F    +  T  +TIG+DF +R++DI+GKK+K+QVWDT
Sbjct: 14  FDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDIDGKKVKMQVWDT 73

Query: 65  AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCD 124
           AGQERF+TIT +YYR A   I+ YD+T   +FE+I +W+  I++  +A V  +L+GNKCD
Sbjct: 74  AGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIMLIGNKCD 133

Query: 125 MEAKRKVQKEQADKLAREHG-IRFFETSAKSSMNVDEAFSSLARDILLKS 173
           +  KR V  E A  LA ++G +   ETSAK S N++E F  +A++++ ++
Sbjct: 134 LWEKRHVLFEDACTLAEKYGLLAVLETSAKESKNIEEVFVLMAKELIARN 183


>gi|190358517 RAB11B, member RAS oncogene family [Homo sapiens]
          Length = 218

 Score =  173 bits (439), Expect = 8e-44
 Identities = 78/165 (47%), Positives = 119/165 (72%)

Query: 5   YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDT 64
           YD+LFK++LIGDSGVGK+ L+ RF  + FN    STIG++F  R++ ++GK IK Q+WDT
Sbjct: 8   YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67

Query: 65  AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCD 124
           AGQER++ IT+AYYRGA+G +LVYDI    ++EN++ W+K ++++A + +  +L+GNK D
Sbjct: 68  AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD 127

Query: 125 MEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI 169
           +   R V  ++A   A ++ + F ETSA  S NV+EAF ++  +I
Sbjct: 128 LRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEI 172


>gi|4758984 Ras-related protein Rab-11A [Homo sapiens]
          Length = 216

 Score =  173 bits (439), Expect = 8e-44
 Identities = 78/165 (47%), Positives = 119/165 (72%)

Query: 5   YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDT 64
           YD+LFK++LIGDSGVGK+ L+ RF  + FN    STIG++F  R++ ++GK IK Q+WDT
Sbjct: 8   YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67

Query: 65  AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCD 124
           AGQER++ IT+AYYRGA+G +LVYDI    ++EN++ W+K ++++A + +  +L+GNK D
Sbjct: 68  AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD 127

Query: 125 MEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI 169
           +   R V  ++A   A ++G+ F ETSA  S NV+ AF ++  +I
Sbjct: 128 LRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEI 172


>gi|28376635 RAB37, member RAS oncogene family isoform 3 [Homo
           sapiens]
          Length = 216

 Score =  172 bits (437), Expect = 1e-43
 Identities = 89/201 (44%), Positives = 135/201 (67%), Gaps = 10/201 (4%)

Query: 6   DH-LFKLLLIGDSGVGKTCLIIRFAEDNF-NNTYISTIGIDFKIRTVDIEGKKIKLQVWD 63
           DH L K +L+GDSGVGKT L+++F +  F   ++ +T+GI F  + V ++G ++KLQ+WD
Sbjct: 19  DHVLHKTILVGDSGVGKTSLLVQFDQGKFIPGSFSATVGIGFTNKVVTVDGVRVKLQIWD 78

Query: 64  TAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKC 123
           TAGQERF+++T AYYR A  ++L+YDIT++ SF+NI+ W+  I E A   V  +LLGNK 
Sbjct: 79  TAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKA 138

Query: 124 DMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGNGNK 183
           DM ++R ++ E  + LARE+G+ F ETSAK+ MNV+ AF ++A+++       R+G+   
Sbjct: 139 DMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKELKY-----RAGHQAD 193

Query: 184 PPS---TDLKTCDKKNTNKCS 201
            PS    D     KK ++ CS
Sbjct: 194 EPSFQIRDYVESQKKRSSCCS 214


>gi|25188193 RAB39B, member RAS oncogene family [Homo sapiens]
          Length = 213

 Score =  170 bits (430), Expect = 9e-43
 Identities = 82/170 (48%), Positives = 127/170 (74%), Gaps = 4/170 (2%)

Query: 9   FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIE-GKKIKLQVWDTAGQ 67
           F+L++IGDS VGK+CLI RF E  F      T+G+DF  R V+IE GK+IKLQ+WDTAGQ
Sbjct: 9   FRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKLQIWDTAGQ 68

Query: 68  ERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASA-GVERLLLGNKCDME 126
           ERF++IT AYYR ++G +L++DIT+ +SF+N+  W++  K +     +  +L+G+KCD++
Sbjct: 69  ERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVLVGHKCDLD 128

Query: 127 AKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI--LLKSG 174
            +R+V + +A+KLA  +G+++ ETSA+ ++NV++AF+ L RDI  L+K G
Sbjct: 129 TQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDIYELVKRG 178


>gi|21361418 RAB30, member RAS oncogene family [Homo sapiens]
          Length = 203

 Score =  168 bits (425), Expect = 3e-42
 Identities = 80/162 (49%), Positives = 118/162 (72%)

Query: 5   YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDT 64
           YD LFK++LIG++GVGKTCL+ RF +  F     +TIG+DF I+TV+I G+K+KLQ+WDT
Sbjct: 6   YDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDT 65

Query: 65  AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCD 124
           AGQERF++IT +YYR A  +IL YDIT E+SF  +  W++ I++ AS  V  +L+GNK D
Sbjct: 66  AGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKID 125

Query: 125 MEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLA 166
           +  +R+V +++A++ +    + + ETSAK S NV++ F  LA
Sbjct: 126 LAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLA 167


>gi|82659107 ras-related GTP-binding protein 4b [Homo sapiens]
          Length = 213

 Score =  165 bits (418), Expect = 2e-41
 Identities = 79/172 (45%), Positives = 117/172 (68%)

Query: 1   MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQ 60
           MA+ YD LFK L+IG +G GK+CL+ +F E+ F      TIG++F  R V++ GK +KLQ
Sbjct: 1   MAETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQ 60

Query: 61  VWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLG 120
           +WDTAGQERF+++T +YYRGA G +LVYDIT  +++ ++  W+   +  AS  +  +L G
Sbjct: 61  IWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCG 120

Query: 121 NKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLK 172
           NK D++ +R+V   +A + A+E+ + F ETSA +  NV+EAF   AR IL K
Sbjct: 121 NKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNK 172


>gi|19923260 RAB4A, member RAS oncogene family [Homo sapiens]
          Length = 218

 Score =  164 bits (416), Expect = 4e-41
 Identities = 78/172 (45%), Positives = 118/172 (68%)

Query: 1   MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQ 60
           M++ YD LFK L+IG++G GK+CL+ +F E  F +    TIG++F  + +++ GK +KLQ
Sbjct: 6   MSETYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQ 65

Query: 61  VWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLG 120
           +WDTAGQERF+++T +YYRGA G +LVYDIT  +++  + NW+   +  AS  +  +L G
Sbjct: 66  IWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCG 125

Query: 121 NKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLK 172
           NK D++A R+V   +A + A+E+ + F ETSA +  NV+EAF   AR IL K
Sbjct: 126 NKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNK 177


>gi|19923483 GTPase Rab14 [Homo sapiens]
          Length = 215

 Score =  163 bits (413), Expect = 8e-41
 Identities = 73/165 (44%), Positives = 112/165 (67%)

Query: 5   YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDT 64
           Y ++FK ++IGD GVGK+CL+ +F E  F      TIG++F  R +++ G+KIKLQ+WDT
Sbjct: 8   YSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDT 67

Query: 65  AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCD 124
           AGQERF+ +T +YYRGA G ++VYDIT   ++ ++ +W+   +   +     +L+GNK D
Sbjct: 68  AGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKAD 127

Query: 125 MEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI 169
           +EA+R V  E+A + A E+G+ F E SAK+  NV++AF   A+ I
Sbjct: 128 LEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKI 172


>gi|5729997 RAB27B, member RAS oncogene family [Homo sapiens]
          Length = 218

 Score =  162 bits (411), Expect = 1e-40
 Identities = 86/208 (41%), Positives = 133/208 (63%), Gaps = 28/208 (13%)

Query: 5   YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGK--------- 55
           YD+L KLL +GDSGVGKT  + R+ ++ FN  +I+T+GIDF+ + V    +         
Sbjct: 6   YDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKA 65

Query: 56  -KIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENA-SAG 113
            K+ LQ+WDTAGQERF+++TTA++R AMG +L++D+T ++SF N++NWM  ++ NA    
Sbjct: 66  FKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCEN 125

Query: 114 VERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKS 173
            + +L+GNK D+  +R+V + QA +LA ++GI +FETSA +  NV++A  +L  D+++K 
Sbjct: 126 PDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLL-DLIMKR 184

Query: 174 --------------GGRRSGN--GNKPP 185
                          G  SGN  G KPP
Sbjct: 185 MEQCVEKTQIPDTVNGGNSGNLDGEKPP 212


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.134    0.383 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,838,318
Number of Sequences: 37866
Number of extensions: 253299
Number of successful extensions: 1361
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 213
Number of HSP's successfully gapped in prelim test: 64
Number of HSP's that attempted gapping in prelim test: 923
Number of HSP's gapped (non-prelim): 294
length of query: 203
length of database: 18,247,518
effective HSP length: 97
effective length of query: 106
effective length of database: 14,574,516
effective search space: 1544898696
effective search space used: 1544898696
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.