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Search of human proteins with 4506335
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4506335 parvalbumin [Homo sapiens]
(110 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4506335 parvalbumin [Homo sapiens] 218 1e-57
gi|148277111 oncomodulin-like [Homo sapiens] 112 8e-26
gi|147906122 oncomodulin [Homo sapiens] 112 8e-26
gi|63054822 calneuron 1 isoform 2 [Homo sapiens] 54 4e-08
gi|157743275 calneuron 1 isoform 1 [Homo sapiens] 54 4e-08
gi|4507615 troponin C, slow [Homo sapiens] 47 3e-06
gi|4885111 calmodulin-like 3 [Homo sapiens] 47 3e-06
gi|4507617 fast skeletal muscle troponin C [Homo sapiens] 46 7e-06
gi|32698884 calcium binding protein 7 [Homo sapiens] 45 1e-05
gi|58218968 calmodulin 3 [Homo sapiens] 44 3e-05
gi|4502549 calmodulin 2 [Homo sapiens] 44 3e-05
gi|5901912 calmodulin 1 [Homo sapiens] 44 3e-05
gi|223278387 calmodulin-like 5 [Homo sapiens] 43 6e-05
gi|4506025 protein phosphatase 3, regulatory subunit B, alpha is... 42 1e-04
gi|22212896 protein phosphatase 3 regulatory subunit B, beta iso... 42 1e-04
gi|209862851 plastin 3 [Homo sapiens] 40 4e-04
gi|7549809 plastin 3 [Homo sapiens] 40 4e-04
gi|167614506 L-plastin [Homo sapiens] 40 5e-04
gi|223718250 plastin 1 [Homo sapiens] 40 5e-04
gi|223718246 plastin 1 [Homo sapiens] 40 5e-04
gi|50897266 calmodulin-like 6 [Homo sapiens] 39 7e-04
gi|4826655 calbindin 1 [Homo sapiens] 37 0.003
gi|4757902 caltractin [Homo sapiens] 37 0.003
gi|7019485 programmed cell death 6 [Homo sapiens] 37 0.003
gi|163644313 calcium and integrin binding 1 [Homo sapiens] 37 0.003
gi|46397403 centrin 3 [Homo sapiens] 37 0.003
gi|153946409 calbindin 2 isoform 1 [Homo sapiens] 37 0.004
gi|6031162 calbindin 2 isoform 22k [Homo sapiens] 36 0.006
gi|4757974 centrin 1 [Homo sapiens] 35 0.010
gi|20149675 EF-hand domain family, member D2 [Homo sapiens] 34 0.022
>gi|4506335 parvalbumin [Homo sapiens]
Length = 110
Score = 218 bits (554), Expect = 1e-57
Identities = 110/110 (100%), Positives = 110/110 (100%)
Query: 1 MSMTDLLNAEDIKKAVGAFSATDSFDHKKFFQMVGLKKKSADDVKKVFHMLDKDKSGFIE 60
MSMTDLLNAEDIKKAVGAFSATDSFDHKKFFQMVGLKKKSADDVKKVFHMLDKDKSGFIE
Sbjct: 1 MSMTDLLNAEDIKKAVGAFSATDSFDHKKFFQMVGLKKKSADDVKKVFHMLDKDKSGFIE 60
Query: 61 EDELGFILKGFSPDARDLSAKETKMLMAAGDKDGDGKIGVDEFSTLVAES 110
EDELGFILKGFSPDARDLSAKETKMLMAAGDKDGDGKIGVDEFSTLVAES
Sbjct: 61 EDELGFILKGFSPDARDLSAKETKMLMAAGDKDGDGKIGVDEFSTLVAES 110
>gi|148277111 oncomodulin-like [Homo sapiens]
Length = 109
Score = 112 bits (279), Expect = 8e-26
Identities = 55/107 (51%), Positives = 74/107 (69%)
Query: 1 MSMTDLLNAEDIKKAVGAFSATDSFDHKKFFQMVGLKKKSADDVKKVFHMLDKDKSGFIE 60
MS+TD+L+A+DI A+ D+F+ +KFFQ GL K SA VK VF +D D+SG+++
Sbjct: 1 MSITDVLSADDIAAALQECQDPDTFEPQKFFQTSGLSKMSASQVKDVFRFIDNDQSGYLD 60
Query: 61 EDELGFILKGFSPDARDLSAKETKMLMAAGDKDGDGKIGVDEFSTLV 107
E+EL F L+ F AR+L+ ETK LMAA D DGDGKIG +EF +V
Sbjct: 61 EEELKFFLQKFESGARELTESETKSLMAAADNDGDGKIGAEEFQEMV 107
>gi|147906122 oncomodulin [Homo sapiens]
Length = 109
Score = 112 bits (279), Expect = 8e-26
Identities = 55/107 (51%), Positives = 75/107 (70%)
Query: 1 MSMTDLLNAEDIKKAVGAFSATDSFDHKKFFQMVGLKKKSADDVKKVFHMLDKDKSGFIE 60
MS+TD+L+A+DI A+ D+F+ +KFFQ GL K SA+ VK VF +D D+SG+++
Sbjct: 1 MSITDVLSADDIAAALQECRDPDTFEPQKFFQTSGLSKMSANQVKDVFRFIDNDQSGYLD 60
Query: 61 EDELGFILKGFSPDARDLSAKETKMLMAAGDKDGDGKIGVDEFSTLV 107
E+EL F L+ F AR+L+ ETK LMAA D DGDGKIG +EF +V
Sbjct: 61 EEELKFFLQKFESGARELTESETKSLMAAADNDGDGKIGAEEFQEMV 107
>gi|63054822 calneuron 1 isoform 2 [Homo sapiens]
Length = 219
Score = 53.5 bits (127), Expect = 4e-08
Identities = 26/78 (33%), Positives = 46/78 (58%), Gaps = 7/78 (8%)
Query: 32 QMVGLKKKSADDVKKVFHMLDKDKSGFIEEDELGFILK--GFSPDARDLSAKETKMLMAA 89
Q+ + + D++++ F +LD+D +GFI + ELG ++ G+ P S E ++M
Sbjct: 29 QLANISVEELDEIREAFRVLDRDGNGFISKQELGMAMRSLGYMP-----SEVELAIIMQR 83
Query: 90 GDKDGDGKIGVDEFSTLV 107
D DGDG++ DEF T++
Sbjct: 84 LDMDGDGQVDFDEFMTIL 101
>gi|157743275 calneuron 1 isoform 1 [Homo sapiens]
Length = 261
Score = 53.5 bits (127), Expect = 4e-08
Identities = 26/78 (33%), Positives = 46/78 (58%), Gaps = 7/78 (8%)
Query: 32 QMVGLKKKSADDVKKVFHMLDKDKSGFIEEDELGFILK--GFSPDARDLSAKETKMLMAA 89
Q+ + + D++++ F +LD+D +GFI + ELG ++ G+ P S E ++M
Sbjct: 71 QLANISVEELDEIREAFRVLDRDGNGFISKQELGMAMRSLGYMP-----SEVELAIIMQR 125
Query: 90 GDKDGDGKIGVDEFSTLV 107
D DGDG++ DEF T++
Sbjct: 126 LDMDGDGQVDFDEFMTIL 143
>gi|4507615 troponin C, slow [Homo sapiens]
Length = 161
Score = 47.4 bits (111), Expect = 3e-06
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 37 KKKSADDVKKVFHMLDKDKSGFIEEDELGFILKGFSPDARDLSAKETKMLMAAGDKDGDG 96
K KS +++ +F M DK+ G+I+ DEL +L+ ++ + + LM GDK+ DG
Sbjct: 90 KGKSEEELSDLFRMFDKNADGYIDLDELKIMLQA---TGETITEDDIEELMKDGDKNNDG 146
Query: 97 KIGVDEF 103
+I DEF
Sbjct: 147 RIDYDEF 153
Score = 35.8 bits (81), Expect = 0.008
Identities = 21/80 (26%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 29 KFFQMVGLKKKSADDVKKVFHMLDKDKSGFIEEDE-LGFILKGFSPDARDLSAKETKMLM 87
K +M+G + + ++++++ +D+D SG ++ DE L +++ D++ S +E L
Sbjct: 43 KVMRMLG-QNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKSEEELSDLF 101
Query: 88 AAGDKDGDGKIGVDEFSTLV 107
DK+ DG I +DE ++
Sbjct: 102 RMFDKNADGYIDLDELKIML 121
>gi|4885111 calmodulin-like 3 [Homo sapiens]
Length = 149
Score = 47.0 bits (110), Expect = 3e-06
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 26 DHKKFFQMVGLKKKSAD---DVKKVFHMLDKDKSGFIEEDELGFILKGFSPDARDLSAKE 82
D +F M+ K K D ++++ F + DKD +GF+ EL ++ LS +E
Sbjct: 65 DFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLG---EKLSDEE 121
Query: 83 TKMLMAAGDKDGDGKIGVDEF 103
++ A D DGDG++ +EF
Sbjct: 122 VDEMIRAADTDGDGQVNYEEF 142
Score = 38.5 bits (88), Expect = 0.001
Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 36 LKKKSADDVKKVFHMLDKDKSGFIEEDELGFILKGFSPDARDLSAKETKMLMAAGDKDGD 95
L ++ + K+ F + DKD G I ELG +++ + + E + +M+ D+DG+
Sbjct: 5 LTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTE---AELRDMMSEIDRDGN 61
Query: 96 GKIGVDEFSTLVA 108
G + EF ++A
Sbjct: 62 GTVDFPEFLGMMA 74
>gi|4507617 fast skeletal muscle troponin C [Homo sapiens]
Length = 160
Score = 45.8 bits (107), Expect = 7e-06
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 37 KKKSADDVKKVFHMLDKDKSGFIEEDELGFILKGFSPDARDLSAKETKMLMAAGDKDGDG 96
K KS +++ + F + D++ G+I+ +EL I + D +E + LM GDK+ DG
Sbjct: 89 KGKSEEELAECFRIFDRNADGYIDPEELAEIFRASGEHVTD---EEIESLMKDGDKNNDG 145
Query: 97 KIGVDEF 103
+I DEF
Sbjct: 146 RIDFDEF 152
Score = 34.7 bits (78), Expect = 0.017
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 7/74 (9%)
Query: 36 LKKKSADDVKKVFHMLDKDKSGFIEEDELGFILK--GFSPDARDLSAKETKMLMAAGDKD 93
L ++ + K F M D D G I ELG +++ G +P +L A ++ D+D
Sbjct: 12 LSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDA-----IIEEVDED 66
Query: 94 GDGKIGVDEFSTLV 107
G G I +EF ++
Sbjct: 67 GSGTIDFEEFLVMM 80
Score = 28.5 bits (62), Expect = 1.2
Identities = 17/70 (24%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 42 DDVKKVFHMLDKDKSGFIEEDE-LGFILKGFSPDARDLSAKETKMLMAAGDKDGDGKIGV 100
+++ + +D+D SG I+ +E L +++ DA+ S +E D++ DG I
Sbjct: 54 EELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDP 113
Query: 101 DEFSTLVAES 110
+E + + S
Sbjct: 114 EELAEIFRAS 123
>gi|32698884 calcium binding protein 7 [Homo sapiens]
Length = 215
Score = 45.1 bits (105), Expect = 1e-05
Identities = 22/76 (28%), Positives = 46/76 (60%), Gaps = 7/76 (9%)
Query: 34 VGLKKKSADDVKKVFHMLDKDKSGFIEEDELGFILK--GFSPDARDLSAKETKMLMAAGD 91
V + + +++++ F + D+D +GFI + ELG ++ G+ P+ +L ++++ D
Sbjct: 28 VDIPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVEL-----EVIIQRLD 82
Query: 92 KDGDGKIGVDEFSTLV 107
DGDG++ +EF TL+
Sbjct: 83 MDGDGQVDFEEFVTLL 98
>gi|58218968 calmodulin 3 [Homo sapiens]
Length = 149
Score = 43.9 bits (102), Expect = 3e-05
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Query: 24 SFDHKKFFQMVGLKKKSAD---DVKKVFHMLDKDKSGFIEEDELGFILKGFSPDARDLSA 80
+ D +F M+ K K D ++++ F + DKD +G+I EL ++ L+
Sbjct: 63 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL---GEKLTD 119
Query: 81 KETKMLMAAGDKDGDGKIGVDEF 103
+E ++ D DGDG++ +EF
Sbjct: 120 EEVDEMIREADIDGDGQVNYEEF 142
Score = 37.4 bits (85), Expect = 0.003
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 36 LKKKSADDVKKVFHMLDKDKSGFIEEDELGFILKGFSPDARDLSAKETKMLMAAGDKDGD 95
L ++ + K+ F + DKD G I ELG +++ + + E + ++ D DG+
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE---AELQDMINEVDADGN 61
Query: 96 GKIGVDEFSTLVA 108
G I EF T++A
Sbjct: 62 GTIDFPEFLTMMA 74
>gi|4502549 calmodulin 2 [Homo sapiens]
Length = 149
Score = 43.9 bits (102), Expect = 3e-05
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Query: 24 SFDHKKFFQMVGLKKKSAD---DVKKVFHMLDKDKSGFIEEDELGFILKGFSPDARDLSA 80
+ D +F M+ K K D ++++ F + DKD +G+I EL ++ L+
Sbjct: 63 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL---GEKLTD 119
Query: 81 KETKMLMAAGDKDGDGKIGVDEF 103
+E ++ D DGDG++ +EF
Sbjct: 120 EEVDEMIREADIDGDGQVNYEEF 142
Score = 37.4 bits (85), Expect = 0.003
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 36 LKKKSADDVKKVFHMLDKDKSGFIEEDELGFILKGFSPDARDLSAKETKMLMAAGDKDGD 95
L ++ + K+ F + DKD G I ELG +++ + + E + ++ D DG+
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE---AELQDMINEVDADGN 61
Query: 96 GKIGVDEFSTLVA 108
G I EF T++A
Sbjct: 62 GTIDFPEFLTMMA 74
>gi|5901912 calmodulin 1 [Homo sapiens]
Length = 149
Score = 43.9 bits (102), Expect = 3e-05
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Query: 24 SFDHKKFFQMVGLKKKSAD---DVKKVFHMLDKDKSGFIEEDELGFILKGFSPDARDLSA 80
+ D +F M+ K K D ++++ F + DKD +G+I EL ++ L+
Sbjct: 63 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL---GEKLTD 119
Query: 81 KETKMLMAAGDKDGDGKIGVDEF 103
+E ++ D DGDG++ +EF
Sbjct: 120 EEVDEMIREADIDGDGQVNYEEF 142
Score = 37.4 bits (85), Expect = 0.003
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 36 LKKKSADDVKKVFHMLDKDKSGFIEEDELGFILKGFSPDARDLSAKETKMLMAAGDKDGD 95
L ++ + K+ F + DKD G I ELG +++ + + E + ++ D DG+
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE---AELQDMINEVDADGN 61
Query: 96 GKIGVDEFSTLVA 108
G I EF T++A
Sbjct: 62 GTIDFPEFLTMMA 74
>gi|223278387 calmodulin-like 5 [Homo sapiens]
Length = 146
Score = 42.7 bits (99), Expect = 6e-05
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 45 KKVFHMLDKDKSGFIEEDELGFILKGFSPDARDLSAKETKMLMAAGDKDGDGKIGVDEFS 104
KK F +D D +G I ELG LK ++LS + + L++ D DGDG+I EF
Sbjct: 14 KKAFSAVDTDGNGTINAQELGAALKA---TGKNLSEAQLRKLISEVDSDGDGEISFQEFL 70
Query: 105 T 105
T
Sbjct: 71 T 71
Score = 37.4 bits (85), Expect = 0.003
Identities = 20/82 (24%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Query: 28 KKFFQMVGLKKKSADDVKKVFHMLDKDKSGFIEEDELGFILKGFSPDARDLSAKETKMLM 87
++F + +D++ F D+D G I DEL + G + L +E ++
Sbjct: 67 QEFLTAAKKARAGLEDLQVAFRAFDQDGDGHITVDELRRAMAGLG---QPLPQEELDAMI 123
Query: 88 AAGDKDGDGKIGVDEFSTLVAE 109
D D DG++ +EF+ ++A+
Sbjct: 124 READVDQDGRVNYEEFARMLAQ 145
Score = 28.9 bits (63), Expect = 0.93
Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 5/72 (6%)
Query: 37 KKKSADDVKKVFHMLDKDKSGFIEEDELGFILKGFSPDARDLSAKETKMLMAAGDKDGDG 96
K S ++K+ +D D G I E K DL ++ A D+DGDG
Sbjct: 42 KNLSEAQLRKLISEVDSDGDGEISFQEFLTAAKKARAGLEDL-----QVAFRAFDQDGDG 96
Query: 97 KIGVDEFSTLVA 108
I VDE +A
Sbjct: 97 HITVDELRRAMA 108
>gi|4506025 protein phosphatase 3, regulatory subunit B, alpha
isoform 1 [Homo sapiens]
Length = 170
Score = 42.0 bits (97), Expect = 1e-04
Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 9/115 (7%)
Query: 1 MSMTDLLNAEDIKKAVGAFSATDS--FDHKKFFQMVGLKKKSADDVKKV---FHMLDKDK 55
MS+ +L +++ + F + D K+F + V D +K+ F + D DK
Sbjct: 44 MSLPELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDK 103
Query: 56 SGFIEEDELGFILK---GFSPDARDLSAKETKMLMAAGDKDGDGKIGVDEFSTLV 107
G+I EL +LK G + L K ++ A DKDGDG+I +EF +V
Sbjct: 104 DGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINA-DKDGDGRISFEEFCAVV 157
>gi|22212896 protein phosphatase 3 regulatory subunit B, beta
isoform [Homo sapiens]
Length = 173
Score = 42.0 bits (97), Expect = 1e-04
Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 9/117 (7%)
Query: 1 MSMTDLLNAEDIKKAVGAFSATDS--FDHKKFFQMVGLKKKSADDVKKV---FHMLDKDK 55
MS+ +L + +++ + F D K+F D+ +K+ F + D DK
Sbjct: 47 MSLPELRHNPLVRRVIDVFDTDGDGEVDFKEFILGTSQFSVKGDEEQKLRFAFSIYDMDK 106
Query: 56 SGFIEEDELGFILK---GFSPDARDLSAKETKMLMAAGDKDGDGKIGVDEFSTLVAE 109
G+I EL +LK G + L K ++ DKDGDGKI +EFS +V +
Sbjct: 107 DGYISNGELFQVLKMMVGNNLTDWQLQQLVDKTIIIL-DKDGDGKISFEEFSAVVRD 162
>gi|209862851 plastin 3 [Homo sapiens]
Length = 630
Score = 40.0 bits (92), Expect = 4e-04
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 36 LKKKSADDVKKVFHMLDKDKSGFIEEDELGFILKGFSPDARDLSAKET-KMLMAAGDKDG 94
+ K D++K+ F +D + +GFI + EL + K + +E + LM GD++
Sbjct: 9 ISKDELDELKEAFAKVDLNSNGFICDYELHELFKEANMPLPGYKVREIIQKLMLDGDRNK 68
Query: 95 DGKIGVDEFSTLVAE 109
DGKI DEF + E
Sbjct: 69 DGKISFDEFVYIFQE 83
>gi|7549809 plastin 3 [Homo sapiens]
Length = 630
Score = 40.0 bits (92), Expect = 4e-04
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 36 LKKKSADDVKKVFHMLDKDKSGFIEEDELGFILKGFSPDARDLSAKET-KMLMAAGDKDG 94
+ K D++K+ F +D + +GFI + EL + K + +E + LM GD++
Sbjct: 9 ISKDELDELKEAFAKVDLNSNGFICDYELHELFKEANMPLPGYKVREIIQKLMLDGDRNK 68
Query: 95 DGKIGVDEFSTLVAE 109
DGKI DEF + E
Sbjct: 69 DGKISFDEFVYIFQE 83
>gi|167614506 L-plastin [Homo sapiens]
Length = 627
Score = 39.7 bits (91), Expect = 5e-04
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 43 DVKKVFHMLDKDKSGFIEEDELGFILKGFSPDARDLSAKE-TKMLMAAGDKDGDGKIGVD 101
++++ F +D D +G+I +EL + K +E T+ LMA GD D DG+I D
Sbjct: 13 ELREAFAKVDTDGNGYISFNELNDLFKAACLPLPGYRVREITENLMATGDLDQDGRISFD 72
Query: 102 EF 103
EF
Sbjct: 73 EF 74
>gi|223718250 plastin 1 [Homo sapiens]
Length = 629
Score = 39.7 bits (91), Expect = 5e-04
Identities = 19/75 (25%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 36 LKKKSADDVKKVFHMLDKDKSGFIEEDELGFILKGFSPDARDLSAKE-TKMLMAAGDKDG 94
+ ++ +++++ F+ +D D SG++ + EL + K S +E + +++ D +
Sbjct: 8 ISREELEELQEAFNKIDIDNSGYVSDYELQDLFKEASLPLPGYKVREIVEKILSVADSNK 67
Query: 95 DGKIGVDEFSTLVAE 109
DGKI +EF +L+ E
Sbjct: 68 DGKISFEEFVSLMQE 82
>gi|223718246 plastin 1 [Homo sapiens]
Length = 629
Score = 39.7 bits (91), Expect = 5e-04
Identities = 19/75 (25%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 36 LKKKSADDVKKVFHMLDKDKSGFIEEDELGFILKGFSPDARDLSAKE-TKMLMAAGDKDG 94
+ ++ +++++ F+ +D D SG++ + EL + K S +E + +++ D +
Sbjct: 8 ISREELEELQEAFNKIDIDNSGYVSDYELQDLFKEASLPLPGYKVREIVEKILSVADSNK 67
Query: 95 DGKIGVDEFSTLVAE 109
DGKI +EF +L+ E
Sbjct: 68 DGKISFEEFVSLMQE 82
>gi|50897266 calmodulin-like 6 [Homo sapiens]
Length = 181
Score = 39.3 bits (90), Expect = 7e-04
Identities = 25/115 (21%), Positives = 49/115 (42%), Gaps = 13/115 (11%)
Query: 3 MTDLLNAEDIKKAVGAFSATDSFDHKKFFQMVGL----------KKKSADDVKKVFHMLD 52
+ LL K + + + D+K FF G + +++ F + D
Sbjct: 61 LMSLLGINPTKSELASMAKDVDRDNKGFFNCDGFLALMGVYHEKAQNQESELRAAFRVFD 120
Query: 53 KDKSGFIEEDELGFILKGFSPDARDLSAKETKMLMAAGDKDGDGKIGVDEFSTLV 107
K+ G+I+ + L ++L ++ A++ +M DKDGD I +EF ++
Sbjct: 121 KEGKGYIDWNTLKYVLMNAGEPLNEVEAEQ---MMKEADKDGDRTIDYEEFVAMM 172
>gi|4826655 calbindin 1 [Homo sapiens]
Length = 261
Score = 37.4 bits (85), Expect = 0.003
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 39 KSADDVKKVFHMLDKDKSGFIEEDELGFILKGFSPDARDL-----SAKETKMLMAAGDKD 93
KS ++ K + D D SGFIE +EL LK A A+ T +++ D +
Sbjct: 98 KSCEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSN 157
Query: 94 GDGKIGVDEFSTLV 107
DGK+ + E + L+
Sbjct: 158 NDGKLELTEMARLL 171
Score = 29.6 bits (65), Expect = 0.54
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 38 KKSADDVKKVFHMLDKDKSGFIEEDELGFILK 69
K + K F + D+D +G+I+E+EL +LK
Sbjct: 185 KMCGKEFNKAFELYDQDGNGYIDENELDALLK 216
>gi|4757902 caltractin [Homo sapiens]
Length = 172
Score = 37.4 bits (85), Expect = 0.003
Identities = 25/106 (23%), Positives = 50/106 (47%), Gaps = 8/106 (7%)
Query: 10 EDIKKAVGAFS--ATDSFDHKKFFQMVGLK---KKSADDVKKVFHMLDKDKSGFIEEDEL 64
E+IKK + T + F ++ K K + +++ K F + D D++G I L
Sbjct: 67 EEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNL 126
Query: 65 GFILKGFSPDARDLSAKETKMLMAAGDKDGDGKIGVDEFSTLVAES 110
+ K + D +E + ++ D+DGDG++ EF ++ ++
Sbjct: 127 KRVAKELGENLTD---EELQEMIDEADRDGDGEVSEQEFLRIMKKT 169
>gi|7019485 programmed cell death 6 [Homo sapiens]
Length = 191
Score = 37.0 bits (84), Expect = 0.003
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 39 KSADDVKKVFHMLDKDKSGFIEEDELGFILKGFSPDARDLSAKETKMLMAAGDKDGDGKI 98
K D + VF D+D SG I+++EL L GF LS + +L+ D+ G G+I
Sbjct: 90 KYITDWQNVFRTYDRDNSGMIDKNELKQALSGF---GYRLSDQFHDILIRKFDRQGRGQI 146
Query: 99 GVDEF 103
D+F
Sbjct: 147 AFDDF 151
>gi|163644313 calcium and integrin binding 1 [Homo sapiens]
Length = 191
Score = 37.0 bits (84), Expect = 0.003
Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 9/110 (8%)
Query: 10 EDIKKAVGAFSATDSFDHKKFFQMVGLKKKSAD-DVKK--VFHMLDKDKSGFIEEDELGF 66
E I + A DS + F ++ + +A D+K F + D D G + ++L
Sbjct: 71 ERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSR 130
Query: 67 ILKGFSPDARD--LSAKETKML----MAAGDKDGDGKIGVDEFSTLVAES 110
++ + + D LSA E K L + D D DG I + EF +++ S
Sbjct: 131 LVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISRS 180
>gi|46397403 centrin 3 [Homo sapiens]
Length = 167
Score = 37.0 bits (84), Expect = 0.003
Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 36 LKKKSADDVKKVFHMLDKDKSGFIEEDELGFILKGFSPDARDLSAKETKMLMAAGDKDGD 95
L++ +++ K F + D D SG I L + + ++S +E + ++ DKDGD
Sbjct: 95 LERDPHEEILKAFKLFDDDDSGKISLRNLRRVARELG---ENMSDEELRAMIEEFDKDGD 151
Query: 96 GKIGVDEFSTLV 107
G+I +EF ++
Sbjct: 152 GEINQEEFIAIM 163
>gi|153946409 calbindin 2 isoform 1 [Homo sapiens]
Length = 271
Score = 36.6 bits (83), Expect = 0.004
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 30 FFQMVGLKKKSADDVKKVFHMLDKDKSGFIEEDEL-GFIL----KGFSPDARDLSAKETK 84
F Q VG S+ + + + D D+SG+IE +EL GF+ K P + T+
Sbjct: 102 FRQHVG----SSAEFMEAWRKYDTDRSGYIEANELKGFLSDLLKKANRPYDEPKLQEYTQ 157
Query: 85 MLMAAGDKDGDGKIGVDEFSTLV 107
++ D +GDGK+G+ E S L+
Sbjct: 158 TILRMFDLNGDGKLGLSEMSRLL 180
Score = 32.3 bits (72), Expect = 0.084
Identities = 13/32 (40%), Positives = 22/32 (68%)
Query: 38 KKSADDVKKVFHMLDKDKSGFIEEDELGFILK 69
K ++++ +F DKD+SG+I+E EL +LK
Sbjct: 194 KLTSEEFNAIFTFYDKDRSGYIDEHELDALLK 225
Score = 26.2 bits (56), Expect = 6.0
Identities = 19/80 (23%), Positives = 35/80 (43%), Gaps = 8/80 (10%)
Query: 36 LKKKSADDVKKVFHMLDKDKSGFIEEDELGFILKGFSPDAR--------DLSAKETKMLM 87
L + +A +++ D D +G+IE EL + + D ++ K M
Sbjct: 13 LAELTASQFLEIWKHFDADGNGYIEGKELENFFQELEKARKGSGMMSKSDNFGEKMKEFM 72
Query: 88 AAGDKDGDGKIGVDEFSTLV 107
DK+ DGKI + E + ++
Sbjct: 73 QKYDKNSDGKIEMAELAQIL 92
>gi|6031162 calbindin 2 isoform 22k [Homo sapiens]
Length = 192
Score = 36.2 bits (82), Expect = 0.006
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 9/84 (10%)
Query: 30 FFQMVGLKKKSADDVKKVFHMLDKDKSGFIEEDEL-GFIL----KGFSPDARDLSAKETK 84
F Q VG S+ + + + D D+SG+IE +EL GF+ K P + T+
Sbjct: 102 FRQHVG----SSAEFMEAWRKYDTDRSGYIEANELKGFLSDLLKKANRPYDEPKLQEYTQ 157
Query: 85 MLMAAGDKDGDGKIGVDEFSTLVA 108
++ D +GDGK+G+ E S + A
Sbjct: 158 TILRMFDLNGDGKLGLSEMSRIEA 181
Score = 26.2 bits (56), Expect = 6.0
Identities = 19/80 (23%), Positives = 35/80 (43%), Gaps = 8/80 (10%)
Query: 36 LKKKSADDVKKVFHMLDKDKSGFIEEDELGFILKGFSPDAR--------DLSAKETKMLM 87
L + +A +++ D D +G+IE EL + + D ++ K M
Sbjct: 13 LAELTASQFLEIWKHFDADGNGYIEGKELENFFQELEKARKGSGMMSKSDNFGEKMKEFM 72
Query: 88 AAGDKDGDGKIGVDEFSTLV 107
DK+ DGKI + E + ++
Sbjct: 73 QKYDKNSDGKIEMAELAQIL 92
>gi|4757974 centrin 1 [Homo sapiens]
Length = 172
Score = 35.4 bits (80), Expect = 0.010
Identities = 17/74 (22%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 37 KKKSADDVKKVFHMLDKDKSGFIEEDELGFILKGFSPDARDLSAKETKMLMAAGDKDGDG 96
+K + +++ K F + D D++G I L + + D +E + ++ D+DGDG
Sbjct: 99 EKDTKEEILKAFRLFDDDETGKISFKNLKRVANELGENLTD---EELQEMIDEADRDGDG 155
Query: 97 KIGVDEFSTLVAES 110
++ +EF ++ ++
Sbjct: 156 EVNEEEFLRIMKKT 169
>gi|20149675 EF-hand domain family, member D2 [Homo sapiens]
Length = 240
Score = 34.3 bits (77), Expect = 0.022
Identities = 22/98 (22%), Positives = 41/98 (41%), Gaps = 3/98 (3%)
Query: 6 LLNAEDIKKAVGAFSATDSFDHKKFFQMVGLKKKSADDVKKVFHMLDKDKSGFIEEDELG 65
LL D+ + +G + + + +K D++K+F D + GFI+ EL
Sbjct: 59 LLRRADLNQGIGEPQSPSRRVFNPYTEFKEFSRKQIKDMEKMFKQYDAGRDGFIDLMELK 118
Query: 66 FILKGFSPDARDLSAKETKMLMAAGDKDGDGKIGVDEF 103
+++ L K ++ D+D D K+ EF
Sbjct: 119 LMMEKLGAPQTHLGLKN---MIKEVDEDFDSKLSFREF 153
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.133 0.362
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,469,287
Number of Sequences: 37866
Number of extensions: 130628
Number of successful extensions: 615
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 66
Number of HSP's that attempted gapping in prelim test: 465
Number of HSP's gapped (non-prelim): 175
length of query: 110
length of database: 18,247,518
effective HSP length: 80
effective length of query: 30
effective length of database: 15,218,238
effective search space: 456547140
effective search space used: 456547140
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.