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Search of human proteins with 4505441
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4505441 natriuretic peptide receptor C/guanylate cyclase C
(atrionatriuretic peptide receptor C) [Homo sapiens]
(540 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4505441 natriuretic peptide receptor C/guanylate cyclase C (a... 1087 0.0
gi|167830411 natriuretic peptide receptor 1 [Homo sapiens] 217 2e-56
gi|4580422 natriuretic peptide receptor B precursor [Homo sapiens] 195 1e-49
gi|134152694 guanylate cyclase 2F [Homo sapiens] 56 7e-08
gi|167000400 gamma-aminobutyric acid (GABA) B receptor 1 isoform... 49 9e-06
gi|11497612 gamma-aminobutyric acid (GABA) B receptor 1 isoform ... 49 9e-06
gi|10835015 gamma-aminobutyric acid (GABA) B receptor 1 isoform ... 49 9e-06
gi|40255245 G protein-coupled receptor 51 [Homo sapiens] 46 8e-05
gi|222080083 guanylate cyclase 2C [Homo sapiens] 44 3e-04
gi|166999223 glutamate receptor, metabotropic 1 isoform beta pre... 44 5e-04
gi|166999098 glutamate receptor, metabotropic 1 isoform alpha pr... 44 5e-04
gi|11496971 NMDA receptor 1 isoform NR1-1 precursor [Homo sapiens] 44 5e-04
gi|11038637 NMDA receptor 1 isoform NR1-3 precursor [Homo sapiens] 44 5e-04
gi|11038635 NMDA receptor 1 isoform NR1-2 precursor [Homo sapiens] 44 5e-04
gi|21322252 androgen receptor isoform 1 [Homo sapiens] 42 0.002
gi|89145413 short stature homeobox 2 isoform a [Homo sapiens] 42 0.002
gi|5453936 POU class 3 homeobox 3 [Homo sapiens] 41 0.002
gi|219842343 glutamate receptor, metabotropic 5 isoform a precur... 41 0.003
gi|4504143 glutamate receptor, metabotropic 5 isoform b precurso... 41 0.003
gi|122937319 even-skipped homeobox 2 [Homo sapiens] 41 0.003
gi|8051631 RNA binding protein (autoantigenic, hnRNP-associated ... 41 0.003
gi|21396480 RNA binding protein (autoantigenic, hnRNP-associated... 41 0.003
gi|4502565 calpain, small subunit 1 [Homo sapiens] 40 0.004
gi|51599151 calpain, small subunit 1 [Homo sapiens] 40 0.004
gi|109452587 family with sequence similarity 98, member B isofor... 40 0.004
gi|51702521 POU domain, class 3, transcription factor 2 [Homo sa... 40 0.007
gi|140161500 ankyrin repeat and sterile alpha motif domain conta... 39 0.012
gi|119220564 one cut domain, family member 2 [Homo sapiens] 39 0.016
gi|197209826 chromosome 2 open reading frame 21 isoform 1 [Homo ... 38 0.021
gi|4885597 sine oculis homeobox homolog 3 [Homo sapiens] 38 0.021
>gi|4505441 natriuretic peptide receptor C/guanylate cyclase C
(atrionatriuretic peptide receptor C) [Homo sapiens]
Length = 540
Score = 1087 bits (2810), Expect = 0.0
Identities = 540/540 (100%), Positives = 540/540 (100%)
Query: 1 MPSLLVLTFSPCVLLGWALLAGGTGGGGVGGGGGGAGIGGGRQEREALPPQKIEVLVLLP 60
MPSLLVLTFSPCVLLGWALLAGGTGGGGVGGGGGGAGIGGGRQEREALPPQKIEVLVLLP
Sbjct: 1 MPSLLVLTFSPCVLLGWALLAGGTGGGGVGGGGGGAGIGGGRQEREALPPQKIEVLVLLP 60
Query: 61 QDDSYLFSLTRVRPAIEYALRSVEGNGTGRRLLPPGTRFQVAYEDSDCGNRALFSLVDRV 120
QDDSYLFSLTRVRPAIEYALRSVEGNGTGRRLLPPGTRFQVAYEDSDCGNRALFSLVDRV
Sbjct: 61 QDDSYLFSLTRVRPAIEYALRSVEGNGTGRRLLPPGTRFQVAYEDSDCGNRALFSLVDRV 120
Query: 121 AAARGAKPDLILGPVCEYAAAPVARLASHWDLPMLSAGALAAGFQHKDSEYSHLTRVAPA 180
AAARGAKPDLILGPVCEYAAAPVARLASHWDLPMLSAGALAAGFQHKDSEYSHLTRVAPA
Sbjct: 121 AAARGAKPDLILGPVCEYAAAPVARLASHWDLPMLSAGALAAGFQHKDSEYSHLTRVAPA 180
Query: 181 YAKMGEMMLALFRHHHWSRAALVYSDDKLERNCYFTLEGVHEVFQEEGLHTSIYSFDETK 240
YAKMGEMMLALFRHHHWSRAALVYSDDKLERNCYFTLEGVHEVFQEEGLHTSIYSFDETK
Sbjct: 181 YAKMGEMMLALFRHHHWSRAALVYSDDKLERNCYFTLEGVHEVFQEEGLHTSIYSFDETK 240
Query: 241 DLDLEDIVRNIQASERVVIMCASSDTIRSIMLVAHRHGMTSGDYAFFNIELFNSSSYGDG 300
DLDLEDIVRNIQASERVVIMCASSDTIRSIMLVAHRHGMTSGDYAFFNIELFNSSSYGDG
Sbjct: 241 DLDLEDIVRNIQASERVVIMCASSDTIRSIMLVAHRHGMTSGDYAFFNIELFNSSSYGDG 300
Query: 301 SWKRGDKHDFEAKQAYSSLQTVTLLRTVKPEFEKFSMEVKSSVEKQGLNMEDYVNMFVEG 360
SWKRGDKHDFEAKQAYSSLQTVTLLRTVKPEFEKFSMEVKSSVEKQGLNMEDYVNMFVEG
Sbjct: 301 SWKRGDKHDFEAKQAYSSLQTVTLLRTVKPEFEKFSMEVKSSVEKQGLNMEDYVNMFVEG 360
Query: 361 FHDAILLYVLALHEVLRAGYSKKDGGKIIQQTWNRTFEGIAGQVSIDANGDRYGDFSVIA 420
FHDAILLYVLALHEVLRAGYSKKDGGKIIQQTWNRTFEGIAGQVSIDANGDRYGDFSVIA
Sbjct: 361 FHDAILLYVLALHEVLRAGYSKKDGGKIIQQTWNRTFEGIAGQVSIDANGDRYGDFSVIA 420
Query: 421 MTDVEAGTQEVIGDYFGKEGRFEMRPNVKYPWGPLKLRIDENRIVEHTNSSPCKSCGLEE 480
MTDVEAGTQEVIGDYFGKEGRFEMRPNVKYPWGPLKLRIDENRIVEHTNSSPCKSCGLEE
Sbjct: 421 MTDVEAGTQEVIGDYFGKEGRFEMRPNVKYPWGPLKLRIDENRIVEHTNSSPCKSCGLEE 480
Query: 481 SAVTGIVVGALLGAGLLMAFYFFRKKYRITIERRTQQEESNLGKHRELREDSIRSHFSVA 540
SAVTGIVVGALLGAGLLMAFYFFRKKYRITIERRTQQEESNLGKHRELREDSIRSHFSVA
Sbjct: 481 SAVTGIVVGALLGAGLLMAFYFFRKKYRITIERRTQQEESNLGKHRELREDSIRSHFSVA 540
>gi|167830411 natriuretic peptide receptor 1 [Homo sapiens]
Length = 1061
Score = 217 bits (553), Expect = 2e-56
Identities = 167/502 (33%), Positives = 249/502 (49%), Gaps = 42/502 (8%)
Query: 53 IEVLVLLP-QDDSYLFSLTRVRPAIEYALRSVEGNGTGRRLLPPGTRFQVAYEDSDCGNR 111
+ V V+LP + SY +S RV PA+E AL V+ R L PG + S+
Sbjct: 35 LTVAVVLPLANTSYPWSWARVGPAVELALAQVKA----RPDLLPGWTVRTVLGSSE---N 87
Query: 112 ALFSLVDRVAAARGA------KPDLILGPVCEYAAAPVARLASHWDLPMLSAGALAAGFQ 165
AL D A P + LGP C YAAAPV R +HW +P+L+AGA A GF
Sbjct: 88 ALGVCSDTAAPLAAVDLKWEHNPAVFLGPGCVYAAAPVGRFTAHWRVPLLTAGAPALGFG 147
Query: 166 HKDSEYSHLTRVAPAYAKMGEMMLALFRHHHWSRAALVYSDDKL--ERNCYFTLEGVHEV 223
KD EY+ TR P+YAK+G+ + AL R W R AL+ + E +C+F +EG+
Sbjct: 148 VKD-EYALTTRAGPSYAKLGDFVAALHRRLGWERQALMLYAYRPGDEEHCFFLVEGLFMR 206
Query: 224 FQEEGLHTSIYSFDETKDLDLED---IVRNIQASERVVIMCASSDTIRSIMLVAHRHGMT 280
++ L+ ++ + +D DL ++R + RV+ +C+S D R++ML+A G+
Sbjct: 207 VRDR-LNITVDHLEFAED-DLSHYTRLLRTMPRKGRVIYICSSPDAFRTLMLLALEAGLC 264
Query: 281 SGDYAFFNIELFNSSSYGDGS------WKRGDKHDFEAKQAYSSLQTVTLLRTVKPEFEK 334
DY FF++++F S G W+RGD D A+QA+ + + +T PE+ +
Sbjct: 265 GEDYVFFHLDIFGQSLQGGQGPAPRRPWERGDGQDVSARQAFQAAKIITYKDPDNPEYLE 324
Query: 335 FSMEVKS-SVEKQGLNMED-YVNMFVEGFHDAILLYVLALHEVLRAGYSKKDGGKIIQQT 392
F ++K + E+ MED VN FHD +LLY+ A+ E L G + DG I Q+
Sbjct: 325 FLKQLKHLAYEQFNFTMEDGLVNTIPASFHDGLLLYIQAVTETLAHGGTVTDGENITQRM 384
Query: 393 WNRTFEGIAGQVSIDANGDRYGDFSVIAMTDVEAGTQEVIGDYFGKEGRFEMRPNVKYPW 452
WNR+F+G+ G + ID++GDR DFS+ M D E G V+ +Y G K W
Sbjct: 385 WNRSFQGVTGYLKIDSSGDRETDFSLWDM-DPENGAFRVVLNYNGTSQELVAVSGRKLNW 443
Query: 453 GPLKLRIDENRIVEHTNSSP-CKSCGLEESAVTGIVVGALLGAGLLMAFYFFRKKYRITI 511
PL + N P C L V + VG+L G+L+ +F +K ++
Sbjct: 444 -PLGYPPPDIPKCGFDNEDPACNQDHLSTLEVLAL-VGSLSLLGILIVSFFIYRKMQLEK 501
Query: 512 E--------RRTQQEESNLGKH 525
E R E S+L +H
Sbjct: 502 ELASELWRVRWEDVEPSSLERH 523
>gi|4580422 natriuretic peptide receptor B precursor [Homo sapiens]
Length = 1047
Score = 195 bits (495), Expect = 1e-49
Identities = 146/477 (30%), Positives = 235/477 (49%), Gaps = 35/477 (7%)
Query: 49 PP--QKIEVLVLLPQDD-SYLFSLTRVRPAIEYALRSVEGNGTGRRLLPPGTRFQVAYED 105
PP + + + V+LP+ + SY ++ RV PA+ A+ ++ R LP RF + +
Sbjct: 19 PPGARNLTLAVVLPEHNLSYAWAWPRVGPAVALAVEALG------RALPVDLRFVSSELE 72
Query: 106 SDCGNR-ALFSLVDRVAAARGAKPDLILGPVCEYAAAPVARLASHWDLPMLSAGALAAGF 164
C A S VD PDL+LGP C Y AA VAR ASHW LP+L+AGA+A+GF
Sbjct: 73 GACSEYLAPLSAVDLKLYH---DPDLLLGPGCVYPAASVARFASHWRLPLLTAGAVASGF 129
Query: 165 QHKDSEYSHLTRVAPAYAKMGEMMLALFRHHHW-SRAALVYSDDKL-ERNCYFTLEGVHE 222
K+ Y L R P+ K+GE ++ L H +W +RAAL+Y D + +R YFT+EGV E
Sbjct: 130 SAKNDHYRTLVRTGPSAPKLGEFVVTLHGHFNWTARAALLYLDARTDDRPHYFTIEGVFE 189
Query: 223 VFQEEGLHT--SIYSFDETKDLDLEDIVRNIQASERVVIMCASSDTIRSIMLVAHRHGMT 280
Q L +Y+ + E I+A+ R+V +C + + I+L A R +T
Sbjct: 190 ALQGSNLSVQHQVYAREPGGP---EQATHFIRANGRIVYICGPLEMLHEILLQAQRENLT 246
Query: 281 SGDYAFFNIELFNSSSYGDGS------WK--RGDKHDFEAKQAYSSLQTVTLLRTVKPEF 332
+GDY FF +++F S + W+ R + ++A+ ++ +T PE+
Sbjct: 247 NGDYVFFYLDVFGESLRAGPTRATGRPWQDNRTREQAQALREAFQTVLVITYREPPNPEY 306
Query: 333 EKFSMEVK-SSVEKQGLNM-EDYVNMFVEGFHDAILLYVLALHEVLRAGYSKKDGGKIIQ 390
++F + + E G+ + +N+ F+D ILLY L+E ++ G +++DG +I++
Sbjct: 307 QEFQNRLLIRAREDFGVELGPSLMNLIAGCFYDGILLYAEVLNETIQEGGTREDGLRIVE 366
Query: 391 QTWNRTFEGIAGQVSIDANGDRYGDFSVIAMTDVEAGTQEVIGDYFGKEGR--FEMRPNV 448
+ R + G+ G V +D N DR DF + AM D+++G + Y G E + + RP
Sbjct: 367 KMQGRRYHGVTGLVVMDKNNDRETDFVLWAMGDLDSGDFQPAAHYSGAEKQIWWTGRP-- 424
Query: 449 KYPWGPLKLRIDENRIVEHTNSSPCKSCGLEESAVTGIVVGALLGAGLLMAFYFFRK 505
PW D + C L A+ + G + +F FRK
Sbjct: 425 -IPWVKGAPPSDNPPCAFDLDDPSCDKTPLSTLAIVALGTGITFIMFGVSSFLIFRK 480
>gi|134152694 guanylate cyclase 2F [Homo sapiens]
Length = 1108
Score = 56.2 bits (134), Expect = 7e-08
Identities = 62/329 (18%), Positives = 133/329 (40%), Gaps = 22/329 (6%)
Query: 99 FQVAYEDSDCG-NRALFSLVDRVAAARGAKPDLILGPVCEYAAAPVARLASHWDLPMLSA 157
F+ + DC +RAL S + A G +GP + L + WD + S
Sbjct: 95 FEYVILNEDCQTSRALSSFISHHQMASG-----FIGPTNPGYCEAASLLGNSWDKGIFSW 149
Query: 158 GALAAGFQHKDSEYSHLTRVAPAYAKMGEMMLALFRHHHWSRAALVYSDDKLERNCYFTL 217
+ +K S Y +R P+ ++ ++ + ++ W+ A ++ SD+ + T
Sbjct: 150 ACVNYELDNKIS-YPTFSRTLPSPIRV---LVTVMKYFQWAHAGVISSDEDI---WVHTA 202
Query: 218 EGVHEVFQEEGLHTSIYSFDETKDLDLEDIVRNIQASERV--VIMCASS-----DTIRSI 270
V + GL + + ++ I ++R+ +IMC S +T +
Sbjct: 203 NRVASALRSHGLPVGVVLTTGQDSQSMRKALQRIHQADRIRIIIMCMHSALIGGETQMHL 262
Query: 271 MLVAHRHGMTSGDYAFFNIELFNSSSYGDGSWKRGDKHDFEAKQAYSSLQTVTLLRTVKP 330
+ AH MT G Y F + S + R +++ + ++AY ++ T+T+ K
Sbjct: 263 LECAHDLKMTDGTYVFVPYDALLYSLPYKHTPYRVLRNNPKLREAYDAVLTITVESQEKT 322
Query: 331 EFEKFSMEVKSSVEKQGLNMEDYVNMFVEGFHDAILLYVLALHEVLRAGYSKKDGGKIIQ 390
++ F+ + L D V+ +++I A++ ++ + ++Q
Sbjct: 323 FYQAFTEAAARGEIPEKLEF-DQVSPLFGTIYNSIYFIAQAMNNAMKEN-GQAGAASLVQ 380
Query: 391 QTWNRTFEGIAGQVSIDANGDRYGDFSVI 419
+ N F G + D+NG+ ++ ++
Sbjct: 381 HSRNMQFHGFNQLMRTDSNGNGISEYVIL 409
>gi|167000400 gamma-aminobutyric acid (GABA) B receptor 1 isoform c
precursor [Homo sapiens]
Length = 899
Score = 49.3 bits (116), Expect = 9e-06
Identities = 82/387 (21%), Positives = 154/387 (39%), Gaps = 46/387 (11%)
Query: 73 RPAIEYALRSVEGNGTGRRLLPPGTRFQVAYEDSDCGNRALFSLVDRVAAARGAKPDLIL 132
+PA+E AL V RR + P ++ + DS C + + K +IL
Sbjct: 127 QPAVEMALEDVNS----RRDILPDYELKLIHHDSKCDPGQATKYLYELLYNDPIK--IIL 180
Query: 133 GPVCEYAAAPVARLASHWDLPMLSAGALAAGFQHKDSEYSHLTRVAPAYAKMGEMMLALF 192
P C + VA A W+L +LS G+ + ++ + R P+ + LF
Sbjct: 181 MPGCSSVSTLVAEAARMWNLIVLSYGSSSPALSNR-QRFPTFFRTHPSATLHNPTRVKLF 239
Query: 193 RHHHWSRAALVYSDDKLERNCYFTLEGVHEVFQEEGLHTSIYSFDETKDLDLEDIVRNIQ 252
W + A + ++ + TL+ + E +E G+ +F ++ D V+N++
Sbjct: 240 EKWGWKKIATIQQTTEVFTS---TLDDLEERVKEAGIE---ITFRQSFFSDPAVPVKNLK 293
Query: 253 ASE-RVVIMCASSDTIRSIMLVAHRHGMTSGDYAFFNIELF--NSSSYGDGSWKRGDKHD 309
+ R+++ R + ++ + Y +F I + N D S
Sbjct: 294 RQDARIIVGLFYETEARKVFCEVYKERLFGKKYVWFLIGWYADNWFKIYDPSINCTVDEM 353
Query: 310 FEAKQAYSSLQTV--------TLLRTVKPEF-EKFSMEVKSSVEKQGLNMEDYVNMFVEG 360
EA + + + + V ++ EF EK + +K E+ G E +
Sbjct: 354 TEAVEGHITTEIVMLNPANTRSISNMTSQEFVEKLTKRLKRHPEETGGFQEAPL------ 407
Query: 361 FHDAILLYVLALHEVL----RAGYSKKD--------GGKIIQQTWNRTFEGIAGQVSIDA 408
+DAI LAL++ R+G +D +I + + +FEG++G V DA
Sbjct: 408 AYDAIWALALALNKTSGGGGRSGVRLEDFNYNNQTITDQIYRAMNSSSFEGVSGHVVFDA 467
Query: 409 NGDRYGDFSVIAMTDVEAGTQEVIGDY 435
+G R + + ++ G+ + IG Y
Sbjct: 468 SGSR---MAWTLIEQLQGGSYKKIGYY 491
>gi|11497612 gamma-aminobutyric acid (GABA) B receptor 1 isoform b
precursor [Homo sapiens]
Length = 844
Score = 49.3 bits (116), Expect = 9e-06
Identities = 82/387 (21%), Positives = 154/387 (39%), Gaps = 46/387 (11%)
Query: 73 RPAIEYALRSVEGNGTGRRLLPPGTRFQVAYEDSDCGNRALFSLVDRVAAARGAKPDLIL 132
+PA+E AL V RR + P ++ + DS C + + K +IL
Sbjct: 72 QPAVEMALEDVNS----RRDILPDYELKLIHHDSKCDPGQATKYLYELLYNDPIK--IIL 125
Query: 133 GPVCEYAAAPVARLASHWDLPMLSAGALAAGFQHKDSEYSHLTRVAPAYAKMGEMMLALF 192
P C + VA A W+L +LS G+ + ++ + R P+ + LF
Sbjct: 126 MPGCSSVSTLVAEAARMWNLIVLSYGSSSPALSNR-QRFPTFFRTHPSATLHNPTRVKLF 184
Query: 193 RHHHWSRAALVYSDDKLERNCYFTLEGVHEVFQEEGLHTSIYSFDETKDLDLEDIVRNIQ 252
W + A + ++ + TL+ + E +E G+ +F ++ D V+N++
Sbjct: 185 EKWGWKKIATIQQTTEVFTS---TLDDLEERVKEAGIE---ITFRQSFFSDPAVPVKNLK 238
Query: 253 ASE-RVVIMCASSDTIRSIMLVAHRHGMTSGDYAFFNIELF--NSSSYGDGSWKRGDKHD 309
+ R+++ R + ++ + Y +F I + N D S
Sbjct: 239 RQDARIIVGLFYETEARKVFCEVYKERLFGKKYVWFLIGWYADNWFKIYDPSINCTVDEM 298
Query: 310 FEAKQAYSSLQTV--------TLLRTVKPEF-EKFSMEVKSSVEKQGLNMEDYVNMFVEG 360
EA + + + + V ++ EF EK + +K E+ G E +
Sbjct: 299 TEAVEGHITTEIVMLNPANTRSISNMTSQEFVEKLTKRLKRHPEETGGFQEAPL------ 352
Query: 361 FHDAILLYVLALHEVL----RAGYSKKD--------GGKIIQQTWNRTFEGIAGQVSIDA 408
+DAI LAL++ R+G +D +I + + +FEG++G V DA
Sbjct: 353 AYDAIWALALALNKTSGGGGRSGVRLEDFNYNNQTITDQIYRAMNSSSFEGVSGHVVFDA 412
Query: 409 NGDRYGDFSVIAMTDVEAGTQEVIGDY 435
+G R + + ++ G+ + IG Y
Sbjct: 413 SGSR---MAWTLIEQLQGGSYKKIGYY 436
>gi|10835015 gamma-aminobutyric acid (GABA) B receptor 1 isoform a
precursor [Homo sapiens]
Length = 961
Score = 49.3 bits (116), Expect = 9e-06
Identities = 82/387 (21%), Positives = 154/387 (39%), Gaps = 46/387 (11%)
Query: 73 RPAIEYALRSVEGNGTGRRLLPPGTRFQVAYEDSDCGNRALFSLVDRVAAARGAKPDLIL 132
+PA+E AL V RR + P ++ + DS C + + K +IL
Sbjct: 189 QPAVEMALEDVNS----RRDILPDYELKLIHHDSKCDPGQATKYLYELLYNDPIK--IIL 242
Query: 133 GPVCEYAAAPVARLASHWDLPMLSAGALAAGFQHKDSEYSHLTRVAPAYAKMGEMMLALF 192
P C + VA A W+L +LS G+ + ++ + R P+ + LF
Sbjct: 243 MPGCSSVSTLVAEAARMWNLIVLSYGSSSPALSNR-QRFPTFFRTHPSATLHNPTRVKLF 301
Query: 193 RHHHWSRAALVYSDDKLERNCYFTLEGVHEVFQEEGLHTSIYSFDETKDLDLEDIVRNIQ 252
W + A + ++ + TL+ + E +E G+ +F ++ D V+N++
Sbjct: 302 EKWGWKKIATIQQTTEVFTS---TLDDLEERVKEAGIE---ITFRQSFFSDPAVPVKNLK 355
Query: 253 ASE-RVVIMCASSDTIRSIMLVAHRHGMTSGDYAFFNIELF--NSSSYGDGSWKRGDKHD 309
+ R+++ R + ++ + Y +F I + N D S
Sbjct: 356 RQDARIIVGLFYETEARKVFCEVYKERLFGKKYVWFLIGWYADNWFKIYDPSINCTVDEM 415
Query: 310 FEAKQAYSSLQTV--------TLLRTVKPEF-EKFSMEVKSSVEKQGLNMEDYVNMFVEG 360
EA + + + + V ++ EF EK + +K E+ G E +
Sbjct: 416 TEAVEGHITTEIVMLNPANTRSISNMTSQEFVEKLTKRLKRHPEETGGFQEAPL------ 469
Query: 361 FHDAILLYVLALHEVL----RAGYSKKD--------GGKIIQQTWNRTFEGIAGQVSIDA 408
+DAI LAL++ R+G +D +I + + +FEG++G V DA
Sbjct: 470 AYDAIWALALALNKTSGGGGRSGVRLEDFNYNNQTITDQIYRAMNSSSFEGVSGHVVFDA 529
Query: 409 NGDRYGDFSVIAMTDVEAGTQEVIGDY 435
+G R + + ++ G+ + IG Y
Sbjct: 530 SGSR---MAWTLIEQLQGGSYKKIGYY 553
>gi|40255245 G protein-coupled receptor 51 [Homo sapiens]
Length = 941
Score = 46.2 bits (108), Expect = 8e-05
Identities = 79/383 (20%), Positives = 144/383 (37%), Gaps = 36/383 (9%)
Query: 72 VRPAIEYALRSVEGNGTGRRLLPPGTRFQVAYEDSDCGN-RALFSLVDRVAAARGAKPDL 130
V PA+E A+ + R + D++C N + L + D A G +
Sbjct: 77 VLPAVELAIEQIRNESLLRPYF-----LDLRLYDTECDNAKGLKAFYD--AIKYGPNHLM 129
Query: 131 ILGPVCEYAAAPVARLASHWDLPMLSAGALAAGFQHKDSEYSHLTRVAPAYAKMGEMMLA 190
+ G VC + +A W+L LS A K +Y + R P+ + +L
Sbjct: 130 VFGGVCPSVTSIIAESLQGWNLVQLSFAATTPVLADK-KKYPYFFRTVPSDNAVNPAILK 188
Query: 191 LFRHHHWSRAALVYSDDKLERNCYFTLEGVHEVFQEEGLHTSIYSFDETKDLDLEDIVRN 250
L +H+ W R + D + L GV ++ E+ + SF ++ + N
Sbjct: 189 LLKHYQWKRVGTLTQDVQRFSEVRNDLTGV--LYGEDIEISDTESFSNDPCTSVKKLKGN 246
Query: 251 IQASERVVIMCASSDTIRSIMLVAHRHGMTSGDYAFFNIELFNSSSYGD-----GSWKRG 305
R+++ + + A+ M Y + + S + S +
Sbjct: 247 ---DVRIILGQFDQNMAAKVFCCAYEENMYGSKYQWIIPGWYEPSWWEQVHTEANSSRCL 303
Query: 306 DKHDFEAKQAY--------SSLQTVTLLRTVKPEFEKFSMEVKSSVEKQGLNMEDYVNMF 357
K+ A + Y SS Q T+ ++E+ +S V + Y ++
Sbjct: 304 RKNLLAAMEGYIGVDFEPLSSKQIKTISGKTPQQYEREYNNKRSGVGPSKFHGYAYDGIW 363
Query: 358 V--EGFHDAI-LLYVLALHEVLR-AGYSKKDGGKIIQQTWNRT-FEGIAGQVSIDANGDR 412
V + A+ L+ + H+ ++ Y+ G+II N T F G+ GQV + NG+R
Sbjct: 364 VIAKTLQRAMETLHASSRHQRIQDFNYTDHTLGRIILNAMNETNFFGVTGQV-VFRNGER 422
Query: 413 YGDFSVIAMTDVEAGTQEVIGDY 435
G I T + + +G+Y
Sbjct: 423 MG---TIKFTQFQDSREVKVGEY 442
>gi|222080083 guanylate cyclase 2C [Homo sapiens]
Length = 1073
Score = 44.3 bits (103), Expect = 3e-04
Identities = 88/390 (22%), Positives = 150/390 (38%), Gaps = 54/390 (13%)
Query: 130 LILGPVCEYAAAPVARLASHWDLPMLSAGALAAGFQHKDSEYSHLTRVAPAYAKMGEMML 189
+++GP C Y+ + L + PM+SAG+ +K++ LTR+ K+ ++
Sbjct: 118 VLIGPSCTYSTFQMY-LDTELSYPMISAGSFGLSCDYKET----LTRLMSPARKLMYFLV 172
Query: 190 AL-------FRHHHWSRAALVYSDDKLERNCYFTLEGVHEVFQEEGLHTSIYSFDETKDL 242
F+ + WS + VY + +C++ L + E H + +D
Sbjct: 173 NFWKTNDLPFKTYSWS-TSYVYKNGTETEDCFWYLNAL-EASVSYFSHELGFKVVLRQDK 230
Query: 243 DLEDIVRNIQASERVVIMCASSDTIRSIMLVAHRHGMTSGDYAFFNIELFNSSSYGDGSW 302
+ +DI+ + V+IMC + + + + D ++LFN + D
Sbjct: 231 EFQDILMDHNRKSNVIIMCGGPEFLYKL----KGDRAVAEDIVIILVDLFNDQYFEDN-- 284
Query: 303 KRGDKHDFEAKQAYSSLQTVTLLRTVKPEFEKFSMEVKSSVEKQGLNMEDYVNMFVEGFH 362
A ++ V +L T+ P + + SS + N+ F +
Sbjct: 285 ----------VTAPDYMKNVLVL-TLSPG----NSLLNSSFSR---NLSPTKRDFALAYL 326
Query: 363 DAILLYVLALHEVLRAGYSKKDGGKIIQQTWNRTFEGIAGQVSIDANGDRYGDFSVIAMT 422
+ ILL+ L L G K N TFEG G V++D GD V+ T
Sbjct: 327 NGILLFGHMLKIFLENG-ENITTPKFAHAFRNLTFEGYDGPVTLDDWGD-VDSTMVLLYT 384
Query: 423 DVEAGTQEVIGDY---FGKEGRFEMRPNVKYPWGPLKLRIDENRIVEHTNSSPCKSCGLE 479
V+ +V+ Y K +M P + W KL D T P + +
Sbjct: 385 SVDTKKYKVLLTYDTHVNKTYPVDMSPT--FTWKNSKLPND------ITGRGP-QILMIA 435
Query: 480 ESAVTGIVVGALLGAGLLMAFYFFRKKYRI 509
+TG VV LL A L++ Y RK Y +
Sbjct: 436 VFTLTGAVVLLLLVALLMLRKY--RKDYEL 463
>gi|166999223 glutamate receptor, metabotropic 1 isoform beta
precursor [Homo sapiens]
Length = 906
Score = 43.5 bits (101), Expect = 5e-04
Identities = 77/384 (20%), Positives = 144/384 (37%), Gaps = 55/384 (14%)
Query: 131 ILGPVCEYAAAPVARLASHWDLPMLSAGALAAGFQHKDSEYSHLTRVAPAYAKMGEMMLA 190
++GP A V L +D+P ++ A + K + Y + RV P+ ML
Sbjct: 159 VIGPGSSSVAIQVQNLLQLFDIPQIAYSATSIDLSDK-TLYKYFLRVVPSDTLQARAMLD 217
Query: 191 LFRHHHWSRAALVYSDDKLERNCYFTLEGVHEVFQEEGL----HTSIYSFDETKDLD-LE 245
+ + ++W+ + V+++ + ++ E+ +EGL IYS K D L
Sbjct: 218 IVKRYNWTYVSAVHTEGNYGES---GMDAFKELAAQEGLCIAHSDKIYSNAGEKSFDRLL 274
Query: 246 DIVRNIQASERVVIMCASSDTIRSIMLVAHRHGMTSGDYAFFN----------IELFNSS 295
+R RVV+ T+R ++ R G+ G+++ IE +
Sbjct: 275 RKLRERLPKARVVVCFCEGMTVRGLLSAMRRLGVV-GEFSLIGSDGWADRDEVIEGYEVE 333
Query: 296 SYGDGSWKRGDKHDFEAKQAYSSLQTVTLLRTV-KPEFEKFSMEVK---SSVEKQGLNM- 350
+ G + K + L+ T R PEF + + + +E
Sbjct: 334 ANGGITIKLQSPEVRSFDDYFLKLRLDTNTRNPWFPEFWQHRFQCRLPGHLLENPNFKRI 393
Query: 351 --------EDYVNMFVEGFHDAILLYVLA-----LHEVLRAGY-------SKKDGGKIIQ 390
E+YV GF +Y +A +H L G+ DG K++
Sbjct: 394 CTGNESLEENYVQDSKMGF-VINAIYAMAHGLQNMHHALCPGHVGLCDAMKPIDGSKLLD 452
Query: 391 QTWNRTFEGIAG-QVSIDANGDRYGDFSVIAMTDVEAGTQEVIGDYFGKEGRFEMRPNVK 449
+F G++G +V D GD G + ++ + EA + + EG +
Sbjct: 453 FLIKSSFIGVSGEEVWFDEKGDAPGRYDIMNLQYTEANRYDYVHVGTWHEGVLNI----- 507
Query: 450 YPWGPLKLRIDENRIVEHTNSSPC 473
K++++++ +V S PC
Sbjct: 508 ---DDYKIQMNKSGVVRSVCSEPC 528
>gi|166999098 glutamate receptor, metabotropic 1 isoform alpha
precursor [Homo sapiens]
Length = 1194
Score = 43.5 bits (101), Expect = 5e-04
Identities = 77/384 (20%), Positives = 144/384 (37%), Gaps = 55/384 (14%)
Query: 131 ILGPVCEYAAAPVARLASHWDLPMLSAGALAAGFQHKDSEYSHLTRVAPAYAKMGEMMLA 190
++GP A V L +D+P ++ A + K + Y + RV P+ ML
Sbjct: 159 VIGPGSSSVAIQVQNLLQLFDIPQIAYSATSIDLSDK-TLYKYFLRVVPSDTLQARAMLD 217
Query: 191 LFRHHHWSRAALVYSDDKLERNCYFTLEGVHEVFQEEGL----HTSIYSFDETKDLD-LE 245
+ + ++W+ + V+++ + ++ E+ +EGL IYS K D L
Sbjct: 218 IVKRYNWTYVSAVHTEGNYGES---GMDAFKELAAQEGLCIAHSDKIYSNAGEKSFDRLL 274
Query: 246 DIVRNIQASERVVIMCASSDTIRSIMLVAHRHGMTSGDYAFFN----------IELFNSS 295
+R RVV+ T+R ++ R G+ G+++ IE +
Sbjct: 275 RKLRERLPKARVVVCFCEGMTVRGLLSAMRRLGVV-GEFSLIGSDGWADRDEVIEGYEVE 333
Query: 296 SYGDGSWKRGDKHDFEAKQAYSSLQTVTLLRTV-KPEFEKFSMEVK---SSVEKQGLNM- 350
+ G + K + L+ T R PEF + + + +E
Sbjct: 334 ANGGITIKLQSPEVRSFDDYFLKLRLDTNTRNPWFPEFWQHRFQCRLPGHLLENPNFKRI 393
Query: 351 --------EDYVNMFVEGFHDAILLYVLA-----LHEVLRAGY-------SKKDGGKIIQ 390
E+YV GF +Y +A +H L G+ DG K++
Sbjct: 394 CTGNESLEENYVQDSKMGF-VINAIYAMAHGLQNMHHALCPGHVGLCDAMKPIDGSKLLD 452
Query: 391 QTWNRTFEGIAG-QVSIDANGDRYGDFSVIAMTDVEAGTQEVIGDYFGKEGRFEMRPNVK 449
+F G++G +V D GD G + ++ + EA + + EG +
Sbjct: 453 FLIKSSFIGVSGEEVWFDEKGDAPGRYDIMNLQYTEANRYDYVHVGTWHEGVLNI----- 507
Query: 450 YPWGPLKLRIDENRIVEHTNSSPC 473
K++++++ +V S PC
Sbjct: 508 ---DDYKIQMNKSGVVRSVCSEPC 528
>gi|11496971 NMDA receptor 1 isoform NR1-1 precursor [Homo sapiens]
Length = 885
Score = 43.5 bits (101), Expect = 5e-04
Identities = 35/153 (22%), Positives = 59/153 (38%), Gaps = 3/153 (1%)
Query: 134 PVCEYAAAPVARLASHWDLPMLSAGALAAGFQHKDSEYSHLTRVAPAYAKMGEMMLALFR 193
P + PV+ A + +P+L + + K S L R P Y+ + + R
Sbjct: 98 PNDHFTPTPVSYTAGFYRIPVLGLTTRMSIYSDKSIHLSFL-RTVPPYSHQSSVWFEMMR 156
Query: 194 HHHWSRAALVYSDDKLERNCYFTLEGVHEVFQEEGLHTSIYSFDETKDLDLEDIVRNIQA 253
+ W+ L+ SDD R LE + E + E + FD ++ +
Sbjct: 157 VYSWNHIILLVSDDHEGRAAQKRLETLLE--ERESKAEKVLQFDPGTKNVTALLMEAKEL 214
Query: 254 SERVVIMCASSDTIRSIMLVAHRHGMTSGDYAF 286
RV+I+ AS D ++ A MT Y +
Sbjct: 215 EARVIILSASEDDAATVYRAAAMLNMTGSGYVW 247
>gi|11038637 NMDA receptor 1 isoform NR1-3 precursor [Homo sapiens]
Length = 938
Score = 43.5 bits (101), Expect = 5e-04
Identities = 35/153 (22%), Positives = 59/153 (38%), Gaps = 3/153 (1%)
Query: 134 PVCEYAAAPVARLASHWDLPMLSAGALAAGFQHKDSEYSHLTRVAPAYAKMGEMMLALFR 193
P + PV+ A + +P+L + + K S L R P Y+ + + R
Sbjct: 98 PNDHFTPTPVSYTAGFYRIPVLGLTTRMSIYSDKSIHLSFL-RTVPPYSHQSSVWFEMMR 156
Query: 194 HHHWSRAALVYSDDKLERNCYFTLEGVHEVFQEEGLHTSIYSFDETKDLDLEDIVRNIQA 253
+ W+ L+ SDD R LE + E + E + FD ++ +
Sbjct: 157 VYSWNHIILLVSDDHEGRAAQKRLETLLE--ERESKAEKVLQFDPGTKNVTALLMEAKEL 214
Query: 254 SERVVIMCASSDTIRSIMLVAHRHGMTSGDYAF 286
RV+I+ AS D ++ A MT Y +
Sbjct: 215 EARVIILSASEDDAATVYRAAAMLNMTGSGYVW 247
>gi|11038635 NMDA receptor 1 isoform NR1-2 precursor [Homo sapiens]
Length = 901
Score = 43.5 bits (101), Expect = 5e-04
Identities = 35/153 (22%), Positives = 59/153 (38%), Gaps = 3/153 (1%)
Query: 134 PVCEYAAAPVARLASHWDLPMLSAGALAAGFQHKDSEYSHLTRVAPAYAKMGEMMLALFR 193
P + PV+ A + +P+L + + K S L R P Y+ + + R
Sbjct: 98 PNDHFTPTPVSYTAGFYRIPVLGLTTRMSIYSDKSIHLSFL-RTVPPYSHQSSVWFEMMR 156
Query: 194 HHHWSRAALVYSDDKLERNCYFTLEGVHEVFQEEGLHTSIYSFDETKDLDLEDIVRNIQA 253
+ W+ L+ SDD R LE + E + E + FD ++ +
Sbjct: 157 VYSWNHIILLVSDDHEGRAAQKRLETLLE--ERESKAEKVLQFDPGTKNVTALLMEAKEL 214
Query: 254 SERVVIMCASSDTIRSIMLVAHRHGMTSGDYAF 286
RV+I+ AS D ++ A MT Y +
Sbjct: 215 EARVIILSASEDDAATVYRAAAMLNMTGSGYVW 247
>gi|21322252 androgen receptor isoform 1 [Homo sapiens]
Length = 920
Score = 41.6 bits (96), Expect = 0.002
Identities = 19/29 (65%), Positives = 20/29 (68%)
Query: 22 GGTGGGGVGGGGGGAGIGGGRQEREALPP 50
GG GGGG GGGGGG G GGG E A+ P
Sbjct: 452 GGGGGGGGGGGGGGGGGGGGGGEAGAVAP 480
Score = 38.1 bits (87), Expect = 0.021
Identities = 16/20 (80%), Positives = 16/20 (80%)
Query: 22 GGTGGGGVGGGGGGAGIGGG 41
GG GGGG GGGGGG G GGG
Sbjct: 451 GGGGGGGGGGGGGGGGGGGG 470
Score = 36.2 bits (82), Expect = 0.078
Identities = 16/22 (72%), Positives = 16/22 (72%)
Query: 20 LAGGTGGGGVGGGGGGAGIGGG 41
L G GGGG GGGGGG G GGG
Sbjct: 446 LYGPCGGGGGGGGGGGGGGGGG 467
Score = 36.2 bits (82), Expect = 0.078
Identities = 17/25 (68%), Positives = 17/25 (68%)
Query: 23 GTGGGGVGGGGGGAGIGGGRQEREA 47
G GGGG GGGGGG G GGG EA
Sbjct: 451 GGGGGGGGGGGGGGGGGGGGGGGEA 475
Score = 33.9 bits (76), Expect = 0.39
Identities = 16/30 (53%), Positives = 16/30 (53%)
Query: 22 GGTGGGGVGGGGGGAGIGGGRQEREALPPQ 51
GG GGGG GGGGGG G PPQ
Sbjct: 459 GGGGGGGGGGGGGGGEAGAVAPYGYTRPPQ 488
Score = 32.0 bits (71), Expect = 1.5
Identities = 15/27 (55%), Positives = 16/27 (59%)
Query: 9 FSPCVLLGWALLAGGTGGGGVGGGGGG 35
+ PC G GG GGGG GGGGGG
Sbjct: 447 YGPCGGGGGGGGGGGGGGGGGGGGGGG 473
>gi|89145413 short stature homeobox 2 isoform a [Homo sapiens]
Length = 331
Score = 41.6 bits (96), Expect = 0.002
Identities = 17/21 (80%), Positives = 17/21 (80%)
Query: 22 GGTGGGGVGGGGGGAGIGGGR 42
GG GGGGVGGGG G G GGGR
Sbjct: 71 GGGGGGGVGGGGAGGGAGGGR 91
Score = 40.8 bits (94), Expect = 0.003
Identities = 16/20 (80%), Positives = 17/20 (85%)
Query: 22 GGTGGGGVGGGGGGAGIGGG 41
GG GGGG GGGGGG G+GGG
Sbjct: 62 GGGGGGGGGGGGGGGGVGGG 81
Score = 36.2 bits (82), Expect = 0.078
Identities = 16/23 (69%), Positives = 17/23 (73%)
Query: 18 ALLAGGTGGGGVGGGGGGAGIGG 40
A+ A G GGGG GGGGGG G GG
Sbjct: 55 AVRAAGGGGGGGGGGGGGGGGGG 77
Score = 35.8 bits (81), Expect = 0.10
Identities = 15/19 (78%), Positives = 15/19 (78%)
Query: 22 GGTGGGGVGGGGGGAGIGG 40
GG GGGG GGGGGG G GG
Sbjct: 64 GGGGGGGGGGGGGGVGGGG 82
Score = 35.8 bits (81), Expect = 0.10
Identities = 15/20 (75%), Positives = 15/20 (75%)
Query: 22 GGTGGGGVGGGGGGAGIGGG 41
GG GGGG GGG GG G GGG
Sbjct: 67 GGGGGGGGGGGVGGGGAGGG 86
>gi|5453936 POU class 3 homeobox 3 [Homo sapiens]
Length = 500
Score = 41.2 bits (95), Expect = 0.002
Identities = 18/21 (85%), Positives = 18/21 (85%)
Query: 21 AGGTGGGGVGGGGGGAGIGGG 41
AGG GGGG GGGGGGAG GGG
Sbjct: 29 AGGGGGGGGGGGGGGAGGGGG 49
Score = 38.5 bits (88), Expect = 0.016
Identities = 16/21 (76%), Positives = 16/21 (76%)
Query: 21 AGGTGGGGVGGGGGGAGIGGG 41
AG GGGG GGGGGG G GGG
Sbjct: 27 AGAGGGGGGGGGGGGGGAGGG 47
Score = 37.7 bits (86), Expect = 0.027
Identities = 17/26 (65%), Positives = 17/26 (65%)
Query: 22 GGTGGGGVGGGGGGAGIGGGRQEREA 47
GG GGGG GGGGG G GGG Q A
Sbjct: 31 GGGGGGGGGGGGGAGGGGGGMQPGSA 56
Score = 35.8 bits (81), Expect = 0.10
Identities = 15/21 (71%), Positives = 15/21 (71%)
Query: 21 AGGTGGGGVGGGGGGAGIGGG 41
A G GGGG GGGGGG G GG
Sbjct: 26 AAGAGGGGGGGGGGGGGGAGG 46
Score = 32.0 bits (71), Expect = 1.5
Identities = 18/34 (52%), Positives = 20/34 (58%), Gaps = 6/34 (17%)
Query: 14 LLGWALLAGGT------GGGGVGGGGGGAGIGGG 41
L G +LLA G+ G G GGGGGG G GGG
Sbjct: 10 LPGNSLLAAGSIVHSDAAGAGGGGGGGGGGGGGG 43
>gi|219842343 glutamate receptor, metabotropic 5 isoform a precursor
[Homo sapiens]
Length = 1212
Score = 40.8 bits (94), Expect = 0.003
Identities = 80/410 (19%), Positives = 158/410 (38%), Gaps = 90/410 (21%)
Query: 124 RGAKPDL-ILGPVCEYAAAPVARLASHWDLPMLSAGALAAGFQHKDSEYSHLTRVAPAYA 182
R KP + ++GP A V L +++P ++ A + K + + + RV P+ A
Sbjct: 138 RSKKPIVGVIGPGSSSVAIQVQNLLQLFNIPQIAYSATSMDLSDK-TLFKYFMRVVPSDA 196
Query: 183 KMGEMMLALFRHHHWSRAALVYSDDKLERNCYFTLEGVHEVFQEEGL---HT-SIYS--F 236
+ M+ + + ++W+ + V+++ + +E ++ +EG+ H+ IYS
Sbjct: 197 QQARAMVDIVKRYNWTYVSAVHTEGNYGES---GMEAFKDMSAKEGICIAHSYKIYSNAG 253
Query: 237 DETKDLDLEDIVRNIQASERVVIMCASSDTIRSIMLVAHRHGMTSGDYAFFNIELFNSSS 296
+++ D L+ + ++ + V C T+R +++ R G+ +G++
Sbjct: 254 EQSFDKLLKKLTSHLPKARVVACFCEGM-TVRGLLMAMRRLGL-AGEFLLLG-------- 303
Query: 297 YGDGSWKRGDKHDFEAKQA-------------------YSSLQTVT-------------- 323
DG R D D ++A Y L+ T
Sbjct: 304 -SDGWADRYDVTDGYQREAVGGITIKLQSPDVKWFDDYYLKLRPETNHRNPWFQEFWQHR 362
Query: 324 ---LLRTVKPEFEKFSMEVKSSVEKQGLNMEDYVNMFVEGFHDAILLYVLALHEV---LR 377
L E K++ SS+ + +++D FV +AI LH + L
Sbjct: 363 FQCRLEGFPQENSKYNKTCNSSLTLKTHHVQDSKMGFV---INAIYSMAYGLHNMQMSLC 419
Query: 378 AGYS-------KKDGGKIIQQTWNRTFEGIAGQ-VSIDANGDRYGDFSVIAMTDVEAGTQ 429
GY+ DG K+++ F G++G + D NGD G + ++ +
Sbjct: 420 PGYAGLCDAMKPIDGRKLLESLMKTNFTGVSGDTILFDENGDSPGRYEIM-------NFK 472
Query: 430 EVIGDYF-----GKEGRFEMRPNVKYPWGPLKLRIDENRIVEHTNSSPCK 474
E+ DYF G E++ + W ++ I+ S PC+
Sbjct: 473 EMGKDYFDYINVGSWDNGELKMDDDEVWS------KKSNIIRSVCSEPCE 516
>gi|4504143 glutamate receptor, metabotropic 5 isoform b precursor
[Homo sapiens]
Length = 1180
Score = 40.8 bits (94), Expect = 0.003
Identities = 80/410 (19%), Positives = 158/410 (38%), Gaps = 90/410 (21%)
Query: 124 RGAKPDL-ILGPVCEYAAAPVARLASHWDLPMLSAGALAAGFQHKDSEYSHLTRVAPAYA 182
R KP + ++GP A V L +++P ++ A + K + + + RV P+ A
Sbjct: 138 RSKKPIVGVIGPGSSSVAIQVQNLLQLFNIPQIAYSATSMDLSDK-TLFKYFMRVVPSDA 196
Query: 183 KMGEMMLALFRHHHWSRAALVYSDDKLERNCYFTLEGVHEVFQEEGL---HT-SIYS--F 236
+ M+ + + ++W+ + V+++ + +E ++ +EG+ H+ IYS
Sbjct: 197 QQARAMVDIVKRYNWTYVSAVHTEGNYGES---GMEAFKDMSAKEGICIAHSYKIYSNAG 253
Query: 237 DETKDLDLEDIVRNIQASERVVIMCASSDTIRSIMLVAHRHGMTSGDYAFFNIELFNSSS 296
+++ D L+ + ++ + V C T+R +++ R G+ +G++
Sbjct: 254 EQSFDKLLKKLTSHLPKARVVACFCEGM-TVRGLLMAMRRLGL-AGEFLLLG-------- 303
Query: 297 YGDGSWKRGDKHDFEAKQA-------------------YSSLQTVT-------------- 323
DG R D D ++A Y L+ T
Sbjct: 304 -SDGWADRYDVTDGYQREAVGGITIKLQSPDVKWFDDYYLKLRPETNHRNPWFQEFWQHR 362
Query: 324 ---LLRTVKPEFEKFSMEVKSSVEKQGLNMEDYVNMFVEGFHDAILLYVLALHEV---LR 377
L E K++ SS+ + +++D FV +AI LH + L
Sbjct: 363 FQCRLEGFPQENSKYNKTCNSSLTLKTHHVQDSKMGFV---INAIYSMAYGLHNMQMSLC 419
Query: 378 AGYS-------KKDGGKIIQQTWNRTFEGIAGQ-VSIDANGDRYGDFSVIAMTDVEAGTQ 429
GY+ DG K+++ F G++G + D NGD G + ++ +
Sbjct: 420 PGYAGLCDAMKPIDGRKLLESLMKTNFTGVSGDTILFDENGDSPGRYEIM-------NFK 472
Query: 430 EVIGDYF-----GKEGRFEMRPNVKYPWGPLKLRIDENRIVEHTNSSPCK 474
E+ DYF G E++ + W ++ I+ S PC+
Sbjct: 473 EMGKDYFDYINVGSWDNGELKMDDDEVWS------KKSNIIRSVCSEPCE 516
>gi|122937319 even-skipped homeobox 2 [Homo sapiens]
Length = 476
Score = 40.8 bits (94), Expect = 0.003
Identities = 17/20 (85%), Positives = 17/20 (85%)
Query: 22 GGTGGGGVGGGGGGAGIGGG 41
GG GGGG GGGGGGAG GGG
Sbjct: 415 GGGGGGGGGGGGGGAGAGGG 434
Score = 37.0 bits (84), Expect = 0.046
Identities = 15/20 (75%), Positives = 15/20 (75%)
Query: 22 GGTGGGGVGGGGGGAGIGGG 41
GG GGGG GGGGGG G G G
Sbjct: 413 GGGGGGGGGGGGGGGGAGAG 432
Score = 34.7 bits (78), Expect = 0.23
Identities = 16/24 (66%), Positives = 17/24 (70%)
Query: 18 ALLAGGTGGGGVGGGGGGAGIGGG 41
A A G+ GGG GGGGGG G GGG
Sbjct: 405 AAAALGSRGGGGGGGGGGGGGGGG 428
Score = 33.1 bits (74), Expect = 0.66
Identities = 15/24 (62%), Positives = 15/24 (62%)
Query: 18 ALLAGGTGGGGVGGGGGGAGIGGG 41
A L GGGG GGGGGG G G G
Sbjct: 407 AALGSRGGGGGGGGGGGGGGGGAG 430
Score = 30.8 bits (68), Expect = 3.3
Identities = 14/24 (58%), Positives = 14/24 (58%)
Query: 18 ALLAGGTGGGGVGGGGGGAGIGGG 41
A A G G GGGGGG G GGG
Sbjct: 403 AAAAAALGSRGGGGGGGGGGGGGG 426
>gi|8051631 RNA binding protein (autoantigenic, hnRNP-associated
with lethal yellow) long isoform [Homo sapiens]
Length = 306
Score = 40.8 bits (94), Expect = 0.003
Identities = 20/44 (45%), Positives = 23/44 (52%)
Query: 21 AGGTGGGGVGGGGGGAGIGGGRQEREALPPQKIEVLVLLPQDDS 64
AGG GGGG GGGG G GGG R P + LPQ ++
Sbjct: 230 AGGGGGGGGSGGGGSGGGGGGGSSRPPAPQENTTSEAGLPQGEA 273
Score = 39.3 bits (90), Expect = 0.009
Identities = 17/29 (58%), Positives = 18/29 (62%)
Query: 22 GGTGGGGVGGGGGGAGIGGGRQEREALPP 50
GG GGGG GGG GG G GGG + PP
Sbjct: 228 GGAGGGGGGGGSGGGGSGGGGGGGSSRPP 256
Score = 33.9 bits (76), Expect = 0.39
Identities = 13/16 (81%), Positives = 13/16 (81%)
Query: 26 GGGVGGGGGGAGIGGG 41
GGG GGGGGG G GGG
Sbjct: 227 GGGAGGGGGGGGSGGG 242
>gi|21396480 RNA binding protein (autoantigenic, hnRNP-associated
with lethal yellow) short isoform [Homo sapiens]
Length = 290
Score = 40.8 bits (94), Expect = 0.003
Identities = 20/44 (45%), Positives = 23/44 (52%)
Query: 21 AGGTGGGGVGGGGGGAGIGGGRQEREALPPQKIEVLVLLPQDDS 64
AGG GGGG GGGG G GGG R P + LPQ ++
Sbjct: 214 AGGGGGGGGSGGGGSGGGGGGGSSRPPAPQENTTSEAGLPQGEA 257
Score = 39.3 bits (90), Expect = 0.009
Identities = 17/29 (58%), Positives = 18/29 (62%)
Query: 22 GGTGGGGVGGGGGGAGIGGGRQEREALPP 50
GG GGGG GGG GG G GGG + PP
Sbjct: 212 GGAGGGGGGGGSGGGGSGGGGGGGSSRPP 240
Score = 33.9 bits (76), Expect = 0.39
Identities = 13/16 (81%), Positives = 13/16 (81%)
Query: 26 GGGVGGGGGGAGIGGG 41
GGG GGGGGG G GGG
Sbjct: 211 GGGAGGGGGGGGSGGG 226
>gi|4502565 calpain, small subunit 1 [Homo sapiens]
Length = 268
Score = 40.4 bits (93), Expect = 0.004
Identities = 21/33 (63%), Positives = 21/33 (63%)
Query: 13 VLLGWALLAGGTGGGGVGGGGGGAGIGGGRQER 45
VL G AGG GGGG GGGGGG G GGG R
Sbjct: 28 VLGGLISGAGGGGGGGGGGGGGGGGGGGGTAMR 60
Score = 32.0 bits (71), Expect = 1.5
Identities = 12/15 (80%), Positives = 13/15 (86%)
Query: 27 GGVGGGGGGAGIGGG 41
GG GGGGGG G+GGG
Sbjct: 10 GGGGGGGGGGGLGGG 24
Score = 30.4 bits (67), Expect = 4.3
Identities = 14/26 (53%), Positives = 15/26 (57%)
Query: 16 GWALLAGGTGGGGVGGGGGGAGIGGG 41
G + GG G GGGGGG G GGG
Sbjct: 24 GLGNVLGGLISGAGGGGGGGGGGGGG 49
Score = 30.0 bits (66), Expect = 5.6
Identities = 14/22 (63%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Query: 18 ALLAGGTGGGGVGGGGGGAGIG 39
+ L GG GGGG GGGG G G+G
Sbjct: 6 SFLKGGGGGGG-GGGGLGGGLG 26
Score = 30.0 bits (66), Expect = 5.6
Identities = 13/17 (76%), Positives = 13/17 (76%)
Query: 25 GGGGVGGGGGGAGIGGG 41
GGGG GGGGGG G G G
Sbjct: 10 GGGGGGGGGGGLGGGLG 26
Score = 30.0 bits (66), Expect = 5.6
Identities = 16/28 (57%), Positives = 17/28 (60%), Gaps = 8/28 (28%)
Query: 22 GGTGGGGVGGGGG--------GAGIGGG 41
GG GGGG+GGG G GAG GGG
Sbjct: 14 GGGGGGGLGGGLGNVLGGLISGAGGGGG 41
Score = 29.6 bits (65), Expect = 7.3
Identities = 15/24 (62%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
Query: 19 LLAGGTGGGGVGGGGGGAG--IGG 40
L GG GGGG GG GGG G +GG
Sbjct: 8 LKGGGGGGGGGGGLGGGLGNVLGG 31
>gi|51599151 calpain, small subunit 1 [Homo sapiens]
Length = 268
Score = 40.4 bits (93), Expect = 0.004
Identities = 21/33 (63%), Positives = 21/33 (63%)
Query: 13 VLLGWALLAGGTGGGGVGGGGGGAGIGGGRQER 45
VL G AGG GGGG GGGGGG G GGG R
Sbjct: 28 VLGGLISGAGGGGGGGGGGGGGGGGGGGGTAMR 60
Score = 32.0 bits (71), Expect = 1.5
Identities = 12/15 (80%), Positives = 13/15 (86%)
Query: 27 GGVGGGGGGAGIGGG 41
GG GGGGGG G+GGG
Sbjct: 10 GGGGGGGGGGGLGGG 24
Score = 30.4 bits (67), Expect = 4.3
Identities = 14/26 (53%), Positives = 15/26 (57%)
Query: 16 GWALLAGGTGGGGVGGGGGGAGIGGG 41
G + GG G GGGGGG G GGG
Sbjct: 24 GLGNVLGGLISGAGGGGGGGGGGGGG 49
Score = 30.0 bits (66), Expect = 5.6
Identities = 14/22 (63%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Query: 18 ALLAGGTGGGGVGGGGGGAGIG 39
+ L GG GGGG GGGG G G+G
Sbjct: 6 SFLKGGGGGGG-GGGGLGGGLG 26
Score = 30.0 bits (66), Expect = 5.6
Identities = 13/17 (76%), Positives = 13/17 (76%)
Query: 25 GGGGVGGGGGGAGIGGG 41
GGGG GGGGGG G G G
Sbjct: 10 GGGGGGGGGGGLGGGLG 26
Score = 30.0 bits (66), Expect = 5.6
Identities = 16/28 (57%), Positives = 17/28 (60%), Gaps = 8/28 (28%)
Query: 22 GGTGGGGVGGGGG--------GAGIGGG 41
GG GGGG+GGG G GAG GGG
Sbjct: 14 GGGGGGGLGGGLGNVLGGLISGAGGGGG 41
Score = 29.6 bits (65), Expect = 7.3
Identities = 15/24 (62%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
Query: 19 LLAGGTGGGGVGGGGGGAG--IGG 40
L GG GGGG GG GGG G +GG
Sbjct: 8 LKGGGGGGGGGGGLGGGLGNVLGG 31
>gi|109452587 family with sequence similarity 98, member B isoform 1
[Homo sapiens]
Length = 433
Score = 40.4 bits (93), Expect = 0.004
Identities = 18/27 (66%), Positives = 18/27 (66%)
Query: 16 GWALLAGGTGGGGVGGGGGGAGIGGGR 42
GW GG GGGG GGGG G G GGGR
Sbjct: 358 GWGGGGGGWGGGGGGGGGWGGGGGGGR 384
Score = 37.4 bits (85), Expect = 0.035
Identities = 17/25 (68%), Positives = 17/25 (68%), Gaps = 3/25 (12%)
Query: 16 GWALLAGGTGGGGVGGGGGGAGIGG 40
GW GG GGGG GGGGGG G GG
Sbjct: 337 GWG---GGGGGGGRGGGGGGGGRGG 358
Score = 37.0 bits (84), Expect = 0.046
Identities = 16/21 (76%), Positives = 16/21 (76%)
Query: 22 GGTGGGGVGGGGGGAGIGGGR 42
GG GGGG GGG GG G GGGR
Sbjct: 336 GGWGGGGGGGGRGGGGGGGGR 356
Score = 35.4 bits (80), Expect = 0.13
Identities = 15/20 (75%), Positives = 15/20 (75%)
Query: 22 GGTGGGGVGGGGGGAGIGGG 41
GG G GG GGGGGG G GGG
Sbjct: 331 GGGGRGGWGGGGGGGGRGGG 350
Score = 35.0 bits (79), Expect = 0.17
Identities = 15/20 (75%), Positives = 15/20 (75%)
Query: 22 GGTGGGGVGGGGGGAGIGGG 41
GG GG G GGGGGG G GGG
Sbjct: 333 GGRGGWGGGGGGGGRGGGGG 352
Score = 34.7 bits (78), Expect = 0.23
Identities = 18/30 (60%), Positives = 18/30 (60%), Gaps = 4/30 (13%)
Query: 16 GWALLAGGTGGGGVGGGGGGAGIGGGRQER 45
GW GG GGGG G GGGG G GG Q R
Sbjct: 365 GW----GGGGGGGGGWGGGGGGGRGGFQGR 390
Score = 34.3 bits (77), Expect = 0.30
Identities = 15/20 (75%), Positives = 15/20 (75%)
Query: 22 GGTGGGGVGGGGGGAGIGGG 41
GG GGGG GGG GG G GGG
Sbjct: 345 GGRGGGGGGGGRGGWGGGGG 364
Score = 33.9 bits (76), Expect = 0.39
Identities = 16/21 (76%), Positives = 16/21 (76%), Gaps = 1/21 (4%)
Query: 22 GGTGGGGVGG-GGGGAGIGGG 41
GG GGGG GG GGGG G GGG
Sbjct: 349 GGGGGGGRGGWGGGGGGWGGG 369
Score = 33.9 bits (76), Expect = 0.39
Identities = 15/20 (75%), Positives = 15/20 (75%)
Query: 22 GGTGGGGVGGGGGGAGIGGG 41
GG G GG GGGGGG G GGG
Sbjct: 352 GGGGRGGWGGGGGGWGGGGG 371
Score = 33.1 bits (74), Expect = 0.66
Identities = 16/23 (69%), Positives = 16/23 (69%), Gaps = 3/23 (13%)
Query: 22 GGTGGGGVG---GGGGGAGIGGG 41
GG GGGG G GGGGG G GGG
Sbjct: 357 GGWGGGGGGWGGGGGGGGGWGGG 379
Score = 32.3 bits (72), Expect = 1.1
Identities = 14/20 (70%), Positives = 14/20 (70%)
Query: 22 GGTGGGGVGGGGGGAGIGGG 41
GG GG G GGGG G G GGG
Sbjct: 354 GGRGGWGGGGGGWGGGGGGG 373
Score = 31.2 bits (69), Expect = 2.5
Identities = 14/22 (63%), Positives = 15/22 (68%)
Query: 22 GGTGGGGVGGGGGGAGIGGGRQ 43
G GGG GGGGGG G GG R+
Sbjct: 411 GDPYGGGGGGGGGGGGGGGYRR 432
Score = 30.4 bits (67), Expect = 4.3
Identities = 15/23 (65%), Positives = 15/23 (65%), Gaps = 3/23 (13%)
Query: 22 GGTGGGGVG---GGGGGAGIGGG 41
GG GG G G GGGGG G GGG
Sbjct: 403 GGYGGRGYGDPYGGGGGGGGGGG 425
Score = 30.4 bits (67), Expect = 4.3
Identities = 16/27 (59%), Positives = 16/27 (59%), Gaps = 3/27 (11%)
Query: 22 GGTGGG---GVGGGGGGAGIGGGRQER 45
GG G G G GGGGGG G GGG R
Sbjct: 406 GGRGYGDPYGGGGGGGGGGGGGGGYRR 432
>gi|51702521 POU domain, class 3, transcription factor 2 [Homo
sapiens]
Length = 443
Score = 39.7 bits (91), Expect = 0.007
Identities = 18/24 (75%), Positives = 18/24 (75%)
Query: 18 ALLAGGTGGGGVGGGGGGAGIGGG 41
AL GG GGGG GGGGGG G GGG
Sbjct: 64 ALSHGGGGGGGGGGGGGGGGGGGG 87
Score = 38.1 bits (87), Expect = 0.021
Identities = 16/20 (80%), Positives = 16/20 (80%)
Query: 22 GGTGGGGVGGGGGGAGIGGG 41
GG GGGG GGGGGG G GGG
Sbjct: 69 GGGGGGGGGGGGGGGGGGGG 88
Score = 35.4 bits (80), Expect = 0.13
Identities = 15/25 (60%), Positives = 15/25 (60%)
Query: 17 WALLAGGTGGGGVGGGGGGAGIGGG 41
W GGGG GGGGGG G GGG
Sbjct: 61 WITALSHGGGGGGGGGGGGGGGGGG 85
Score = 35.4 bits (80), Expect = 0.13
Identities = 15/20 (75%), Positives = 15/20 (75%)
Query: 22 GGTGGGGVGGGGGGAGIGGG 41
GG GGGG GGGGGG G G G
Sbjct: 71 GGGGGGGGGGGGGGGGGGDG 90
Score = 34.7 bits (78), Expect = 0.23
Identities = 18/40 (45%), Positives = 21/40 (52%)
Query: 22 GGTGGGGVGGGGGGAGIGGGRQEREALPPQKIEVLVLLPQ 61
GG GGGG GGGGGG G G L I+ V++ Q
Sbjct: 72 GGGGGGGGGGGGGGGGGDGSPWSTSPLGQPDIKPSVVVQQ 111
>gi|140161500 ankyrin repeat and sterile alpha motif domain
containing 1 [Homo sapiens]
Length = 1134
Score = 38.9 bits (89), Expect = 0.012
Identities = 16/20 (80%), Positives = 17/20 (85%)
Query: 22 GGTGGGGVGGGGGGAGIGGG 41
GG GGGG GGGGGG+G GGG
Sbjct: 33 GGGGGGGSGGGGGGSGGGGG 52
Score = 36.2 bits (82), Expect = 0.078
Identities = 17/29 (58%), Positives = 19/29 (65%)
Query: 13 VLLGWALLAGGTGGGGVGGGGGGAGIGGG 41
+L G L +G GGGG G GGGG G GGG
Sbjct: 22 LLSGKRLSSGFGGGGGGGSGGGGGGSGGG 50
Score = 35.0 bits (79), Expect = 0.17
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 22 GGTGGGGVGGGGGGAGIGGGRQEREAL 48
GG+GGGG G GGGG G+G +L
Sbjct: 38 GGSGGGGGGSGGGGGGLGSSSHPLSSL 64
Score = 33.5 bits (75), Expect = 0.51
Identities = 14/20 (70%), Positives = 14/20 (70%)
Query: 22 GGTGGGGVGGGGGGAGIGGG 41
GG GGG GGGGG G GGG
Sbjct: 34 GGGGGGSGGGGGGSGGGGGG 53
Score = 29.6 bits (65), Expect = 7.3
Identities = 13/20 (65%), Positives = 13/20 (65%)
Query: 22 GGTGGGGVGGGGGGAGIGGG 41
GG G GG GGG GG G G G
Sbjct: 36 GGGGSGGGGGGSGGGGGGLG 55
>gi|119220564 one cut domain, family member 2 [Homo sapiens]
Length = 504
Score = 38.5 bits (88), Expect = 0.016
Identities = 18/28 (64%), Positives = 19/28 (67%)
Query: 22 GGTGGGGVGGGGGGAGIGGGRQEREALP 49
GG+GGGG GGGGGG G G QE A P
Sbjct: 38 GGSGGGGGGGGGGGGGGPGHEQELLASP 65
Score = 36.2 bits (82), Expect = 0.078
Identities = 16/30 (53%), Positives = 18/30 (60%)
Query: 21 AGGTGGGGVGGGGGGAGIGGGRQEREALPP 50
AGG GGG GGGGGG G G G ++ P
Sbjct: 36 AGGGSGGGGGGGGGGGGGGPGHEQELLASP 65
Score = 34.3 bits (77), Expect = 0.30
Identities = 15/22 (68%), Positives = 15/22 (68%)
Query: 20 LAGGTGGGGVGGGGGGAGIGGG 41
L G GGG GGGGGG G GGG
Sbjct: 32 LHGPAGGGSGGGGGGGGGGGGG 53
>gi|197209826 chromosome 2 open reading frame 21 isoform 1 [Homo
sapiens]
Length = 3258
Score = 38.1 bits (87), Expect = 0.021
Identities = 18/33 (54%), Positives = 20/33 (60%)
Query: 22 GGTGGGGVGGGGGGAGIGGGRQEREALPPQKIE 54
GG GGGG G GGGG G GGG E+ +K E
Sbjct: 747 GGDGGGGGGDGGGGGGGGGGPYEKNDKNQEKDE 779
Score = 34.7 bits (78), Expect = 0.23
Identities = 15/20 (75%), Positives = 15/20 (75%)
Query: 22 GGTGGGGVGGGGGGAGIGGG 41
G GGGG GGGGGG G GGG
Sbjct: 742 GEEGGGGDGGGGGGDGGGGG 761
Score = 32.7 bits (73), Expect = 0.86
Identities = 14/20 (70%), Positives = 14/20 (70%)
Query: 22 GGTGGGGVGGGGGGAGIGGG 41
GG G GG GGG GG G GGG
Sbjct: 745 GGGGDGGGGGGDGGGGGGGG 764
Score = 32.3 bits (72), Expect = 1.1
Identities = 16/31 (51%), Positives = 17/31 (54%)
Query: 10 SPCVLLGWALLAGGTGGGGVGGGGGGAGIGG 40
S C G A+ G GGG GGGG G G GG
Sbjct: 725 STCGFGGPAVSGAGDGGGEEGGGGDGGGGGG 755
Score = 30.4 bits (67), Expect = 4.3
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 22 GGTGGGGVGGGGGGAGIGGGRQEREALPP 50
GG GGGG GGGGG QE++ P
Sbjct: 754 GGDGGGGGGGGGGPYEKNDKNQEKDESTP 782
Score = 30.0 bits (66), Expect = 5.6
Identities = 13/20 (65%), Positives = 13/20 (65%)
Query: 22 GGTGGGGVGGGGGGAGIGGG 41
GG GGG GGGGG GGG
Sbjct: 741 GGEEGGGGDGGGGGGDGGGG 760
>gi|4885597 sine oculis homeobox homolog 3 [Homo sapiens]
Length = 332
Score = 38.1 bits (87), Expect = 0.021
Identities = 16/37 (43%), Positives = 21/37 (56%)
Query: 22 GGTGGGGVGGGGGGAGIGGGRQEREALPPQKIEVLVL 58
GG+GGG GGGG G GGG PP+++ + L
Sbjct: 46 GGSGGGNGAGGGGAGGAGGGGGGGSRAPPEELSMFQL 82
Score = 33.1 bits (74), Expect = 0.66
Identities = 16/24 (66%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Query: 19 LLAGGTGGGGVGGGGG-GAGIGGG 41
LLA GG G GGGGG G G GGG
Sbjct: 28 LLASSGGGNGAGGGGGAGGGSGGG 51
Score = 32.3 bits (72), Expect = 1.1
Identities = 13/20 (65%), Positives = 14/20 (70%)
Query: 22 GGTGGGGVGGGGGGAGIGGG 41
GG G GG GG GGG+G G G
Sbjct: 34 GGNGAGGGGGAGGGSGGGNG 53
Score = 32.3 bits (72), Expect = 1.1
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 22 GGTGGGGVG-GGGGGAGIGGGRQEREALPPQKIEVLVLLPQ 61
GG G GG G GG GG G GG R E L ++ L P+
Sbjct: 50 GGNGAGGGGAGGAGGGGGGGSRAPPEELSMFQLPTLNFSPE 90
Score = 32.0 bits (71), Expect = 1.5
Identities = 15/21 (71%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Query: 21 AGGTGGGGVGGGGGGAGIGGG 41
AGG GG G GG GGG G GGG
Sbjct: 38 AGGGGGAG-GGSGGGNGAGGG 57
Score = 31.6 bits (70), Expect = 1.9
Identities = 13/24 (54%), Positives = 16/24 (66%)
Query: 18 ALLAGGTGGGGVGGGGGGAGIGGG 41
++L +GGG GGGGGAG G G
Sbjct: 26 SILLASSGGGNGAGGGGGAGGGSG 49
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.137 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,345,439
Number of Sequences: 37866
Number of extensions: 954446
Number of successful extensions: 12461
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 215
Number of HSP's successfully gapped in prelim test: 75
Number of HSP's that attempted gapping in prelim test: 6917
Number of HSP's gapped (non-prelim): 3285
length of query: 540
length of database: 18,247,518
effective HSP length: 107
effective length of query: 433
effective length of database: 14,195,856
effective search space: 6146805648
effective search space used: 6146805648
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.