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Search of human proteins with 13027630
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|13027630 DiGeorge syndrome critical region protein 14 [Homo
sapiens]
(476 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|13027630 DiGeorge syndrome critical region protein 14 [Homo s... 946 0.0
gi|155030232 proline, glutamic acid and leucine rich protein 1 [... 47 5e-05
gi|217035154 RCSD domain containing 1 [Homo sapiens] 39 0.008
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 39 0.013
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 39 0.013
gi|91982772 mucin 17 [Homo sapiens] 38 0.023
gi|239752594 PREDICTED: hypothetical protein, partial [Homo sapi... 37 0.030
gi|38176300 nestin [Homo sapiens] 37 0.039
gi|18379328 WW domain-containing adapter with a coiled-coil regi... 37 0.039
gi|115298682 HBxAg transactivated protein 2 [Homo sapiens] 37 0.039
gi|19923559 EMSY protein [Homo sapiens] 37 0.051
gi|51173717 actin-binding LIM protein 1 isoform s [Homo sapiens] 37 0.051
gi|51173715 actin-binding LIM protein 1 isoform c [Homo sapiens] 37 0.051
gi|51173713 actin-binding LIM protein 1 isoform b [Homo sapiens] 37 0.051
gi|51173711 actin-binding LIM protein 1 isoform a [Homo sapiens] 37 0.051
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 36 0.067
gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens] 36 0.067
gi|189181724 proteoglycan 4 isoform D [Homo sapiens] 36 0.087
gi|189181722 proteoglycan 4 isoform C [Homo sapiens] 36 0.087
gi|189181720 proteoglycan 4 isoform B [Homo sapiens] 36 0.087
gi|67190163 proteoglycan 4 isoform A [Homo sapiens] 36 0.087
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 36 0.087
gi|90669307 cyclin B3 isoform 3 [Homo sapiens] 35 0.15
gi|9910266 kinesin family member 15 [Homo sapiens] 35 0.15
gi|27262622 neuron navigator 1 [Homo sapiens] 35 0.15
gi|32140760 collagen, type XXVII, alpha 1 [Homo sapiens] 35 0.19
gi|34365793 WNK lysine deficient protein kinase 4 [Homo sapiens] 34 0.25
gi|239747867 PREDICTED: hypothetical protein [Homo sapiens] 34 0.25
gi|58761544 amine oxidase (flavin containing) domain 2 isoform a... 34 0.33
gi|83921602 solute carrier family 38, member 10 isoform a [Homo ... 34 0.33
>gi|13027630 DiGeorge syndrome critical region protein 14 [Homo
sapiens]
Length = 476
Score = 946 bits (2446), Expect = 0.0
Identities = 476/476 (100%), Positives = 476/476 (100%)
Query: 1 METPGASASSLLLPAASRPPRKREAGEAGAATSKQRVLDEEEYIEGLQTVIQRDFFPDVE 60
METPGASASSLLLPAASRPPRKREAGEAGAATSKQRVLDEEEYIEGLQTVIQRDFFPDVE
Sbjct: 1 METPGASASSLLLPAASRPPRKREAGEAGAATSKQRVLDEEEYIEGLQTVIQRDFFPDVE 60
Query: 61 KLQAQKEYLEAEENGDLERMRQIAIKFGSALGKMSREPPPPYVTPATFETPEVHAGTGVV 120
KLQAQKEYLEAEENGDLERMRQIAIKFGSALGKMSREPPPPYVTPATFETPEVHAGTGVV
Sbjct: 61 KLQAQKEYLEAEENGDLERMRQIAIKFGSALGKMSREPPPPYVTPATFETPEVHAGTGVV 120
Query: 121 GNKPRPRGRGLEDGEAGEEEEKEPLPSLDVFLSRYTSEDNASFQEIMEVAKERSRARHAW 180
GNKPRPRGRGLEDGEAGEEEEKEPLPSLDVFLSRYTSEDNASFQEIMEVAKERSRARHAW
Sbjct: 121 GNKPRPRGRGLEDGEAGEEEEKEPLPSLDVFLSRYTSEDNASFQEIMEVAKERSRARHAW 180
Query: 181 LYQAEEEFEKRQKDNLELPSAEHQAIESSQASVETWKYKAKNSLMYYPEGVPDEEQLFKK 240
LYQAEEEFEKRQKDNLELPSAEHQAIESSQASVETWKYKAKNSLMYYPEGVPDEEQLFKK
Sbjct: 181 LYQAEEEFEKRQKDNLELPSAEHQAIESSQASVETWKYKAKNSLMYYPEGVPDEEQLFKK 240
Query: 241 PRQVVHKNTRFLRDPFSQALSRCQLQQAAALNAQHKQGKVGPDGKELIPQESPRVGGFGF 300
PRQVVHKNTRFLRDPFSQALSRCQLQQAAALNAQHKQGKVGPDGKELIPQESPRVGGFGF
Sbjct: 241 PRQVVHKNTRFLRDPFSQALSRCQLQQAAALNAQHKQGKVGPDGKELIPQESPRVGGFGF 300
Query: 301 VATPSPAPGVNESPMMTWGEVENTPLRVEGSETPYVDRTPGPAFKILEPGRRERLGLKMA 360
VATPSPAPGVNESPMMTWGEVENTPLRVEGSETPYVDRTPGPAFKILEPGRRERLGLKMA
Sbjct: 301 VATPSPAPGVNESPMMTWGEVENTPLRVEGSETPYVDRTPGPAFKILEPGRRERLGLKMA 360
Query: 361 NEAAAKNRAKKQEALRRVTENLASLTPKGLSPAMSPALQRLVSRTASKYTDRALRASYTP 420
NEAAAKNRAKKQEALRRVTENLASLTPKGLSPAMSPALQRLVSRTASKYTDRALRASYTP
Sbjct: 361 NEAAAKNRAKKQEALRRVTENLASLTPKGLSPAMSPALQRLVSRTASKYTDRALRASYTP 420
Query: 421 SPARSTHLKTPASGLQTPTSTPAPGSATRTPLTQDPASITDNLLQLPARRKASDFF 476
SPARSTHLKTPASGLQTPTSTPAPGSATRTPLTQDPASITDNLLQLPARRKASDFF
Sbjct: 421 SPARSTHLKTPASGLQTPTSTPAPGSATRTPLTQDPASITDNLLQLPARRKASDFF 476
>gi|155030232 proline, glutamic acid and leucine rich protein 1 [Homo
sapiens]
Length = 1130
Score = 46.6 bits (109), Expect = 5e-05
Identities = 55/213 (25%), Positives = 89/213 (41%), Gaps = 22/213 (10%)
Query: 39 DEEEYIEGLQTV---IQRDFFPDVEKLQAQKEYLEAEENGDLERMRQIAIKFGSALGKMS 95
DEEEY E + + +F + +L+ ++E + EE +LE + + +FG+A G++
Sbjct: 916 DEEEYFEEEEEEEEEFEEEFEEEEGELEEEEEEEDEEEEEELEEVEDL--EFGTAGGEVE 973
Query: 96 REPPPPYVTPATFETPEVHAGTGVVGNKPRPR-GRGLEDGEAGEEEEK----------EP 144
PPP P PE V +P P G LE E G EEE+ E
Sbjct: 974 EGAPPPPTLPPALPPPE---SPPKVQPEPEPEPGLLLEVEEPGTEEERGADTAPTLAPEA 1030
Query: 145 LPSLDVFLSRYTSEDNASFQEIMEVAKERSRARHAWLYQAEEEFEKRQKDNLELPSAEHQ 204
LPS E A+ E+ +E A L + E+ + + E P+ E
Sbjct: 1031 LPSQGEV--EREGESPAAGPPPQELVEEEPSAPPTLLEEETEDGSDKVQPPPETPAEEEM 1088
Query: 205 AIES-SQASVETWKYKAKNSLMYYPEGVPDEEQ 236
E+ ++A E + L + + PD+E+
Sbjct: 1089 ETETEAEALQEKEQDDTAAMLADFIDCPPDDEK 1121
Score = 32.3 bits (72), Expect = 0.97
Identities = 34/130 (26%), Positives = 47/130 (36%), Gaps = 18/130 (13%)
Query: 98 PPPPYVTPATFETPE-VHAGTGVVGNKPRPR--------GRGLEDGEAGEEEEKEPLPSL 148
PPPP P T P+ V GT G P E+ E EEEE+E
Sbjct: 845 PPPPVPGPVTLPPPQLVPEGTPGGGGPPALEEDLTVININSSDEEEEEEEEEEEE----- 899
Query: 149 DVFLSRYTSEDNASFQEIMEVAKERSRARHAWLYQAEEEFEKRQKDNLELPSAEHQAIES 208
E+ F+E E +E + EEEFE+ + + E E + E
Sbjct: 900 ----EEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEFEEEEGELEEEEEEEDEEEEE 955
Query: 209 SQASVETWKY 218
VE ++
Sbjct: 956 ELEEVEDLEF 965
>gi|217035154 RCSD domain containing 1 [Homo sapiens]
Length = 416
Score = 39.3 bits (90), Expect = 0.008
Identities = 57/207 (27%), Positives = 79/207 (38%), Gaps = 45/207 (21%)
Query: 283 DGKELIPQESPRVGGFGFVATP--SP-----APGVNESPMMTWGEVENTPLRV----EGS 331
D L+P SP+ G + +P SP +PGV P E E P+ EGS
Sbjct: 96 DPAALLPGASPKSPGLKAMVSPFHSPPSTPSSPGVRSRP----SEAEEVPVSFDQPPEGS 151
Query: 332 ETPYVD--RTPGPAFKILEPGRRER--------LGLKMANEAAAKNRAKKQEALRRV--- 378
P + RT G + K P RR R LG A E++ +N AK+++ +
Sbjct: 152 HLPCYNKVRTRG-SIKRRPPSRRFRRSQSDCGELGDFRAVESSQQNGAKEEDGDEVLPSK 210
Query: 379 ---------TENLASLTPKGLSPAMSPALQRLVSRTASKYTDRALRASYTPSPARSTHLK 429
+E A + L PA P L+R SRT + DRA + AR
Sbjct: 211 SKAPGSPLSSEGAAGEGVRTLGPAEKPPLRRSPSRTEKQEEDRATEEAKNGEKAR----- 265
Query: 430 TPASGLQTPTSTPAPGSATRTPLTQDP 456
S + PA +P T P
Sbjct: 266 --RSSEEVDGQHPAQEEVPESPQTSGP 290
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 38.5 bits (88), Expect = 0.013
Identities = 55/214 (25%), Positives = 77/214 (35%), Gaps = 22/214 (10%)
Query: 265 LQQAAALNAQHKQGKVGPDGKELIPQESPRVGGFGFVATPSPAPGVNESPMMTWGEVENT 324
L A A+ + + G G IP+ +PR G T S P S G E
Sbjct: 47 LGAAGAVGRKPLAERAGGIGGATIPESAPRAGPTRSAGTSSRNPA---SRPPASGRGERA 103
Query: 325 PLRVEGSETPYVDRTPGPAFKILEPGRRERLGLKM-ANEAAAKNRA----KKQEALRRVT 379
P S P +PG A PG + GL++ A E A+ +A K+
Sbjct: 104 PPAKNTSPGPV--SSPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGAR 161
Query: 380 ENLASLTPKGLSPAMSPALQRLVSRTASKYTDRALRASYTPSPARSTHLKTPASGLQTPT 439
+ + TP SPAM+ R+ + T+ L P PA S + P G +
Sbjct: 162 RDTSGPTPGTPSPAMA-------RRSRAAGTEVGL-----PRPAPSARPRPPTEGPRKSV 209
Query: 440 STPAPGSATRTPLTQDPASITDNLLQLPARRKAS 473
S+ + S T LQ PA R S
Sbjct: 210 SSASEHSTTEPSPAARRRPSAGGGLQRPASRSLS 243
Score = 31.6 bits (70), Expect = 1.6
Identities = 32/96 (33%), Positives = 41/96 (42%), Gaps = 19/96 (19%)
Query: 391 SPAMSPALQRLVSRTASKYTDRA-------LRA--SYTPSPARSTHLKTPASG------- 434
SP+ P+LQ L S A+ + L+A S+ PSP S P
Sbjct: 344 SPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALP 403
Query: 435 -LQTPTSTPA--PGSATRTPLTQDPASITDNLLQLP 467
LQ P S PA P S TP Q P ++ +LLQ P
Sbjct: 404 PLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAP 439
Score = 31.6 bits (70), Expect = 1.6
Identities = 29/85 (34%), Positives = 36/85 (42%), Gaps = 8/85 (9%)
Query: 391 SPAMSPALQRLVSRTASKYTDRALRASYTPSPARSTHLKTPASGLQTPTSTPA--PGSAT 448
SP SP L L T S AL +P P+ +Q P S PA P S +
Sbjct: 410 SPPASPPLSPLA--TPSPQAPNALAVHLLQAPFSPP----PSPPVQAPFSPPASPPVSPS 463
Query: 449 RTPLTQDPASITDNLLQLPARRKAS 473
TP +Q P S+ LQ+P AS
Sbjct: 464 ATPPSQAPPSLAAPPLQVPPSPPAS 488
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 38.5 bits (88), Expect = 0.013
Identities = 55/214 (25%), Positives = 77/214 (35%), Gaps = 22/214 (10%)
Query: 265 LQQAAALNAQHKQGKVGPDGKELIPQESPRVGGFGFVATPSPAPGVNESPMMTWGEVENT 324
L A A+ + + G G IP+ +PR G T S P S G E
Sbjct: 47 LGAAGAVGRKPLAERAGGIGGATIPESAPRAGPTRSAGTSSRNPA---SRPPASGRGERA 103
Query: 325 PLRVEGSETPYVDRTPGPAFKILEPGRRERLGLKM-ANEAAAKNRA----KKQEALRRVT 379
P S P +PG A PG + GL++ A E A+ +A K+
Sbjct: 104 PPAKNTSPGPV--SSPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGAR 161
Query: 380 ENLASLTPKGLSPAMSPALQRLVSRTASKYTDRALRASYTPSPARSTHLKTPASGLQTPT 439
+ + TP SPAM+ R+ + T+ L P PA S + P G +
Sbjct: 162 RDTSGPTPGTPSPAMA-------RRSRAAGTEVGL-----PRPAPSARPRPPTEGPRKSV 209
Query: 440 STPAPGSATRTPLTQDPASITDNLLQLPARRKAS 473
S+ + S T LQ PA R S
Sbjct: 210 SSASEHSTTEPSPAARRRPSAGGGLQRPASRSLS 243
Score = 35.0 bits (79), Expect = 0.15
Identities = 49/197 (24%), Positives = 71/197 (36%), Gaps = 21/197 (10%)
Query: 282 PDGKELIPQESPR--VGGFGFVATPSPAPGVNESPMMTWGEVENTPLRVEGSETPYVDRT 339
P + P E PR V +T P+P P G + S TP
Sbjct: 194 PSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPA 253
Query: 340 -PGPAFKILEPGRRERLGLKMANEAAAKNRAKKQEALR--RVT----ENLASLTPKGLSP 392
GP+ + G A ++ + K +ALR +VT + +L P SP
Sbjct: 254 RSGPSAR----------GTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSP 303
Query: 393 AMSPALQRLVSRTASKYTDRA--LRASYTPSPARSTHLKTPASGLQTPTSTPAPGSATRT 450
+P+ +R + A L A+ PSP +T L P S S T
Sbjct: 304 LATPSPSGTKARPVPPPDNAATPLPATLPPSPPLATPLPLAPPSPSAPPSLQTLPSPPAT 363
Query: 451 PLTQDPASITDNLLQLP 467
P +Q P S+T +Q P
Sbjct: 364 PPSQAPPSMTTPPMQAP 380
Score = 32.3 bits (72), Expect = 0.97
Identities = 30/89 (33%), Positives = 37/89 (41%), Gaps = 12/89 (13%)
Query: 381 NLASLTPKGLSPAMSPALQRLVSRTASKYTDRALRASYTPSPARSTHLKTPASGLQTPTS 440
++A+ P+ SP LQ L S S TP P L P LQ P S
Sbjct: 586 SIATPPPQAPPALASPPLQGLPSPPLSPLA--------TPPPQAPPXLALPP--LQAPPS 635
Query: 441 TPA--PGSATRTPLTQDPASITDNLLQLP 467
PA P S TP Q P ++ +LLQ P
Sbjct: 636 PPASPPLSPLATPSPQAPNALAVHLLQAP 664
Score = 31.6 bits (70), Expect = 1.6
Identities = 29/85 (34%), Positives = 36/85 (42%), Gaps = 8/85 (9%)
Query: 391 SPAMSPALQRLVSRTASKYTDRALRASYTPSPARSTHLKTPASGLQTPTSTPA--PGSAT 448
SP SP L L T S AL +P P+ +Q P S PA P S +
Sbjct: 635 SPPASPPLSPLA--TPSPQAPNALAVHLLQAPFSPP----PSPPVQAPFSPPASPPVSPS 688
Query: 449 RTPLTQDPASITDNLLQLPARRKAS 473
TP +Q P S+ LQ+P AS
Sbjct: 689 ATPPSQAPPSLAAPPLQVPPSPPAS 713
Score = 30.4 bits (67), Expect = 3.7
Identities = 30/85 (35%), Positives = 35/85 (41%), Gaps = 8/85 (9%)
Query: 391 SPAMSPALQRLVSRTASKYTDRALRASYTPSPARSTHLKTPASGLQTPTSTPA--PGSAT 448
SP SP +Q S AS + S TP L P LQ P S PA P S +
Sbjct: 666 SPPPSPPVQAPFSPPASP----PVSPSATPPSQAPPSLAAPP--LQVPPSPPASPPMSPS 719
Query: 449 RTPLTQDPASITDNLLQLPARRKAS 473
TP Q P + LQ+P AS
Sbjct: 720 ATPPPQAPPPLAAPPLQVPPSPPAS 744
>gi|91982772 mucin 17 [Homo sapiens]
Length = 4493
Score = 37.7 bits (86), Expect = 0.023
Identities = 44/174 (25%), Positives = 67/174 (38%), Gaps = 18/174 (10%)
Query: 301 VATPSPAPGVNESPMMTWGEVENTPLRVEGSETPYVDRTPGPAFKILEPGRRERLGLKMA 360
++T S P +P+ T E ++P EG+ P + G P L +
Sbjct: 3122 ISTLSTTPVDTSTPVTTSTEAHSSPTTSEGTSMPTSTPSEGSTPLTYMPVST-MLVVSSE 3180
Query: 361 NEAAAKNRAKKQEALRRVTENLASLTPKGLS-------PAMSPALQRLVSRTASKYTDRA 413
+ + + TE +S T +G S M+P VS T ++ +
Sbjct: 3181 DSTLSATPVDTSTPVTTSTEATSSTTAEGTSIPTSTPSEGMTPLTSVPVSNTPVASSEAS 3240
Query: 414 LRA-----SYTPSPARSTHLKTP--ASGLQTPTSTPAPGSATRTPLTQDPASIT 460
+ + S TP + +P A G PTSTP+ GS TPLT P S T
Sbjct: 3241 ILSTTPVDSNTPLTTSTEASSSPPTAEGTSMPTSTPSEGS---TPLTSMPVSTT 3291
Score = 36.6 bits (83), Expect = 0.051
Identities = 42/173 (24%), Positives = 61/173 (35%), Gaps = 17/173 (9%)
Query: 302 ATPSPAPGVNESPMMTWGEVENTPLRVEGSETPYVDRTPGPAFKILEPGRRERLGLKMAN 361
+T S P + SP+ T EV ++P EG+ P + G P + +
Sbjct: 824 STLSTTPVDSNSPVTTSTEVSSSPTPAEGTSMPTSTYSEGRTPLTSMPVSTTLVATSAIS 883
Query: 362 EAAAKNRAKKQEALRRVTENLASLTPKGLS-PAMSPA-----LQRLVSRTASKYTDRALR 415
+ + T +G S P +P L + T + A
Sbjct: 884 TLSTTPVDTSTPVTNSTEARSSPTTSEGTSMPTSTPGEGSTPLTSMPDSTTPVVSSEART 943
Query: 416 ASYTP--------SPARSTHLKTPASGLQTPTSTPAPGSATRTPLTQDPASIT 460
S TP + +T T A G PTSTP+ G+ TPLT P S T
Sbjct: 944 LSATPVDTSTPVTTSTEATSSPTTAEGTSIPTSTPSEGT---TPLTSTPVSHT 993
Score = 36.6 bits (83), Expect = 0.051
Identities = 46/178 (25%), Positives = 69/178 (38%), Gaps = 25/178 (14%)
Query: 301 VATPSPAPGVNESPMMTWGEVENTPLRVEGSETPYVDRTPGPAFKILEPGRRERLGLKMA 360
++T S P N +P+ T E ++P EG+ P + G P + ++
Sbjct: 1707 ISTLSTTPVDNSTPVTTSTEARSSPTTSEGTSMPNSTPSEGTTPLTSIPVSTTPV---LS 1763
Query: 361 NEAAAKNRAKKQEALRRVTENLASLTP----------KGLSPAMSPALQRLVSRTASKYT 410
+EA+ + + T A+ +P LS M+P VS T +
Sbjct: 1764 SEASTLSATPIDTSTPVTTSTEATSSPTTAEGTSIPTSTLSEGMTPLTSTPVSHTLVANS 1823
Query: 411 DRALRASYTPSPARS--------THLKTPASGLQTPTSTPAPGSATRTPLTQDPASIT 460
+ A S TP + S + TPA G TSTP+ GS T LT P S T
Sbjct: 1824 E-ASTLSTTPVDSNSPVVTSTAVSSSPTPAEGTSIATSTPSEGS---TALTSIPVSTT 1877
Score = 35.8 bits (81), Expect = 0.087
Identities = 45/177 (25%), Positives = 62/177 (35%), Gaps = 23/177 (12%)
Query: 301 VATPSPAPGVNESPMMTWGEVENTPLRVEGSETPYVDRTPGPAFKIL------------- 347
++T S P +P+ E ++P EG+ P TPG L
Sbjct: 882 ISTLSTTPVDTSTPVTNSTEARSSPTTSEGTSMP--TSTPGEGSTPLTSMPDSTTPVVSS 939
Query: 348 EPGRRERLGLKMANEAAAKNRAKKQEALRRVTENLASLTPKGLSPAMS-PALQRLVSRTA 406
E + + A T S +G +P S P LV+ +
Sbjct: 940 EARTLSATPVDTSTPVTTSTEATSSPTTAEGTSIPTSTPSEGTTPLTSTPVSHTLVANSE 999
Query: 407 SKYTDRALRASYTPSPARSTHLKTP---ASGLQTPTSTPAPGSATRTPLTQDPASIT 460
+ S TP ST +P A G PTSTP+ GS TPLT+ P S T
Sbjct: 1000 ASTLSTTPVDSNTPLTT-STEASSPPPTAEGTSMPTSTPSEGS---TPLTRMPVSTT 1052
Score = 34.3 bits (77), Expect = 0.25
Identities = 43/173 (24%), Positives = 67/173 (38%), Gaps = 19/173 (10%)
Query: 303 TPSPAPGVNESPMMTWGEVENTPLRVEGS----ETPYVDRTPGPAFKI----LEPGRRER 354
T S P V +P+ T+ +V ++P +GS TP R P + + +
Sbjct: 1886 TLSTTPAVTSTPVTTYAQVSSSPTTADGSSMPTSTPREGRPPLTSIPVSTTTVASSEINT 1945
Query: 355 LGLKMANEAAAKNRAKKQEALRRVTENLASLTP---KGLSPAMSPALQR--LVSRTASKY 409
L +A+ + + + + TP +G +P S L +VS AS
Sbjct: 1946 LSTTLADTRTPVTTYSQASSSPTTADGTSMPTPAYSEGSTPLTSMPLSTTLVVSSEASTL 2005
Query: 410 TDRALRASYTPSPARSTHLKTP--ASGLQTPTSTPAPGSATRTPLTQDPASIT 460
+ + S TP+ + +P A G TSTP S TPL P S T
Sbjct: 2006 STTPVDTS-TPATTSTEGSSSPTTAGGTSIQTSTP---SERTTPLAGMPVSTT 2054
Score = 33.9 bits (76), Expect = 0.33
Identities = 46/172 (26%), Positives = 68/172 (39%), Gaps = 27/172 (15%)
Query: 308 PGVNESPMMTWGEVENTPLRVEGSETP---YVD-RTPGPAFKILEPGRRERLGLKMANEA 363
P + P++T EV ++P EG+ P Y + RTP + + L A
Sbjct: 1302 PVDTKGPVVTSNEVSSSPTPAEGTSMPTSTYSEGRTPLTSIPV-----NTTLVASSAISI 1356
Query: 364 AAKNRAKKQEALRRVTENLAS-LTPKGLS-PAMSPA-----LQRLVSRTASKYTDRALRA 416
+ + TE +S T +G S P +P+ L + T + A
Sbjct: 1357 LSTTPVDNSTPVTTSTEACSSPTTSEGTSMPNSNPSEGTTPLTSIPVSTTPVVSSEASTL 1416
Query: 417 SYTP--------SPARSTHLKTPASGLQTPTSTPAPGSATRTPLTQDPASIT 460
S TP + A +T T A G+ PTSTP+ G +TPL P S T
Sbjct: 1417 SATPVDTSTPGTTSAEATSSPTTAEGISIPTSTPSEG---KTPLKSIPVSNT 1465
Score = 33.5 bits (75), Expect = 0.43
Identities = 46/171 (26%), Positives = 62/171 (36%), Gaps = 29/171 (16%)
Query: 292 SPRVGGFGFVATPSPAPGVNESPMMTWGEVENTPLRVEGSETPYVDRTPGPAFKILEPGR 351
SP +AT +P+ G S +T V TP V SE + TP
Sbjct: 433 SPTTAEDTSIATSTPSEG---STPLTSMPVSTTP--VASSEASNLSTTP----------- 476
Query: 352 RERLGLKMANEAAAKNRAKKQEALRRVTENLASLTPKGLSP--AMSPALQRLVSRTASKY 409
+ + A V S +G +P +MS + + S AS
Sbjct: 477 -----VDSKTQVTTSTEASSSPPTAEVNSMPTSTPSEGSTPLTSMSVSTMPVASSEASTL 531
Query: 410 TDRALRAS--YTPSPARSTHLKTPASGLQTPTSTPAPGSATRTPLTQDPAS 458
+ + S T S S+ TP G PTSTP+ GS TPLT P S
Sbjct: 532 STTPVDTSTPVTTSSEASSSSTTP-EGTSIPTSTPSEGS---TPLTNMPVS 578
Score = 33.1 bits (74), Expect = 0.57
Identities = 45/174 (25%), Positives = 69/174 (39%), Gaps = 19/174 (10%)
Query: 302 ATPSPAPGVNESPMMTWGEVENTPLRVEGSETP---YVD-RTPGPAFKI-LEPGRRERLG 356
+T S P + SP++T EV ++P EG+ P Y + RTP + + P +
Sbjct: 1649 STLSTTPVDSNSPVITSTEVSSSPTPAEGTSMPTSTYTEGRTPLTSITVRTTPVASSAIS 1708
Query: 357 ------LKMANEAAAKNRAKKQEALRRVTENLASLTPKGLSPAMSPALQR--LVSRTASK 408
+ + A+ T S +G +P S + ++S AS
Sbjct: 1709 TLSTTPVDNSTPVTTSTEARSSPTTSEGTSMPNSTPSEGTTPLTSIPVSTTPVLSSEAST 1768
Query: 409 YTDRALRASYTP--SPARSTHLKTPASGLQTPTSTPAPGSATRTPLTQDPASIT 460
+ + S TP + +T T A G PTST + G TPLT P S T
Sbjct: 1769 LSATPIDTS-TPVTTSTEATSSPTTAEGTSIPTSTLSEG---MTPLTSTPVSHT 1818
Score = 33.1 bits (74), Expect = 0.57
Identities = 43/173 (24%), Positives = 64/173 (36%), Gaps = 17/173 (9%)
Query: 302 ATPSPAPGVNESPMMTWGEVENTPLRVEGSETPYVDRTPGPAFKILEPGRRERLGLKMA- 360
+T S P +P+ T E ++P EG+ P + G P + A
Sbjct: 1767 STLSATPIDTSTPVTTSTEATSSPTTAEGTSIPTSTLSEGMTPLTSTPVSHTLVANSEAS 1826
Query: 361 ---------NEAAAKNRAKKQEALRRVTENLASLTPKGLSPAMS--PALQRLV--SRTAS 407
N + A ++A+ TP S A++ P V S T +
Sbjct: 1827 TLSTTPVDSNSPVVTSTAVSSSPTPAEGTSIATSTPSEGSTALTSIPVSTTTVASSETNT 1886
Query: 408 KYTDRALRASYTPSPARSTHLKTPASGLQTPTSTPAPGSATRTPLTQDPASIT 460
T A+ ++ + A+ + T A G PTSTP G R PLT P S T
Sbjct: 1887 LSTTPAVTSTPVTTYAQVSSSPTTADGSSMPTSTPREG---RPPLTSIPVSTT 1936
Score = 33.1 bits (74), Expect = 0.57
Identities = 44/174 (25%), Positives = 70/174 (40%), Gaps = 19/174 (10%)
Query: 302 ATPSPAPGVNESPMMTWGEVENTPLRVEGSE---TPYVD-RTPGPAFKILEP-------G 350
+T S P + SP++T EV ++P+ EG+ + Y D RTP + +
Sbjct: 2120 STLSTTPVDSNSPVITSTEVSSSPIPTEGTSMQTSTYSDRRTPLTSMPVSTTVVASSAIS 2179
Query: 351 RRERLGLKMANEAAAKNRAKKQEALRRVTENLASLTPKGLSP--AMSPALQRLVSRTASK 408
+ + A+ T S +G +P +M + +V+ AS
Sbjct: 2180 TLSTTPVDTSTPVTNSTEARSSPTTSEGTSMPTSTPSEGSTPFTSMPVSTMPVVTSEAST 2239
Query: 409 YTDRALRASYTP--SPARSTHLKTPASGLQTPTSTPAPGSATRTPLTQDPASIT 460
+ + S TP + +T T A G PTST + G+ TPLT P S T
Sbjct: 2240 LSATPVDTS-TPVTTSTEATSSPTTAEGTSIPTSTLSEGT---TPLTSIPVSHT 2289
Score = 31.2 bits (69), Expect = 2.2
Identities = 42/175 (24%), Positives = 61/175 (34%), Gaps = 19/175 (10%)
Query: 301 VATPSPAPGVNESPMMTWGEVENTPLRVEGSE----TPYVDRTPGPAFKIL-------EP 349
++T S P +P+ E ++P EG+ TP TP + + E
Sbjct: 2178 ISTLSTTPVDTSTPVTNSTEARSSPTTSEGTSMPTSTPSEGSTPFTSMPVSTMPVVTSEA 2237
Query: 350 GRRERLGLKMANEAAAKNRAKKQEALRRVTENLASLTPKGLSPAMS-PALQRLVSRTASK 408
+ + A T S +G +P S P LV+ +
Sbjct: 2238 STLSATPVDTSTPVTTSTEATSSPTTAEGTSIPTSTLSEGTTPLTSIPVSHTLVANSEVS 2297
Query: 409 YTDRALRASYTPSPARSTHLKTP---ASGLQTPTSTPAPGSATRTPLTQDPASIT 460
S TP ST +P A G PTST + G+ TPLT+ P S T
Sbjct: 2298 TLSTTPVDSNTPFTT-STEASSPPPTAEGTSMPTSTSSEGN---TPLTRMPVSTT 2348
Score = 30.4 bits (67), Expect = 3.7
Identities = 17/31 (54%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
Query: 430 TPASGLQTPTSTPAPGSATRTPLTQDPASIT 460
T A G PTSTP+ GS TPLT P S T
Sbjct: 730 TTADGASMPTSTPSEGS---TPLTSMPVSKT 757
Score = 30.4 bits (67), Expect = 3.7
Identities = 40/170 (23%), Positives = 63/170 (37%), Gaps = 17/170 (10%)
Query: 305 SPAPGVNESPMMTWGEVENTPLRVEGSE----TPYVDRTPGPAFKIL-------EPGRRE 353
S P + +P+ T E ++P EG+ TP TP + + E
Sbjct: 3243 STTPVDSNTPLTTSTEASSSPPTAEGTSMPTSTPSEGSTPLTSMPVSTTTVASSETSTLS 3302
Query: 354 RLGLKMANEAAAKNRAKKQEALRRVTENLASLTPKGLSPA--MSPALQRLVSRTASKYTD 411
+ ++A + T S +G +P MS + +VS AS +
Sbjct: 3303 TTPADTSTPVTTYSQASSSPPIADGTSMPTSTYSEGSTPLTNMSFSTTPVVSSEASTLST 3362
Query: 412 RALRASYTPSPARSTHLK-TPASGLQTPTSTPAPGSATRTPLTQDPASIT 460
+ S + + L T A G PTS+P+ G+ TPL P S T
Sbjct: 3363 TPVDTSTPVTTSTEASLSPTTAEGTSIPTSSPSEGT---TPLASMPVSTT 3409
Score = 29.6 bits (65), Expect = 6.3
Identities = 44/174 (25%), Positives = 61/174 (35%), Gaps = 19/174 (10%)
Query: 302 ATPSPAPGVNESPMMTWGEVENTPLRVEGSETPYVDRTPGPAFKILEPGRRERLGLKMAN 361
+T S P + +P+ T E ++ EG+ P T G P L ++
Sbjct: 647 STLSTTPVDSNTPVTTSTEATSSSTTAEGTSMPTSTYTEGSTPLTSMPVNTT---LVASS 703
Query: 362 EAAAKNRAKKQEALRRVTENLASLTPKGLSPAMSPALQR------LVSRTASKY---TDR 412
EA+ + + T AS +P A P L S SK +
Sbjct: 704 EASTLSTTPVDTSTPVTTSTEASSSPTTADGASMPTSTPSEGSTPLTSMPVSKTLLTSSE 763
Query: 413 ALRASYTPSPARSTHLKTPASGLQTPTSTPAPGSATRTP------LTQDPASIT 460
A S TP STH+ T +PT+T TP LT P SIT
Sbjct: 764 ASTLSTTPLDT-STHITTSTEASCSPTTTEGTSMPISTPSEGSPLLTSIPVSIT 816
Score = 29.6 bits (65), Expect = 6.3
Identities = 42/178 (23%), Positives = 65/178 (36%), Gaps = 27/178 (15%)
Query: 302 ATPSPAPGVNESPMMTWGEVENTPLRVEGSETPYVDRTPGPAFKILEPGRRERLGLK--M 359
+T S P + SP++T E+ ++ EG+ P + G P R + K
Sbjct: 2533 STLSTTPVDSNSPVVTSTEISSSATSAEGTSMPTSTYSEGST-----PLRSMPVSTKPLA 2587
Query: 360 ANEAAAKNRAKKQEALRRVTENLASLTPKGLSPAMSP---------ALQRLVSRTASKYT 410
++EA+ + ++ T S +P P +L ++ T +
Sbjct: 2588 SSEASTLSTTPVDTSIPVTTSTETSSSPTTAKDTSMPISTPSEVSTSLTSILVSTMPVAS 2647
Query: 411 DRALRASYTPSPAR--------STHLKTPASGLQTPTSTPAPGSATRTPLTQDPASIT 460
A S TP R ++ T A G PTSTP S TPLT S T
Sbjct: 2648 SEASTLSTTPVDTRTLVTTSTGTSSSPTTAEGSSMPTSTPGERS---TPLTNILVSTT 2702
>gi|239752594 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 673
Score = 37.4 bits (85), Expect = 0.030
Identities = 51/183 (27%), Positives = 65/183 (35%), Gaps = 35/183 (19%)
Query: 303 TPSPAPGVNESPMMTWGEVENTPLRVEGSETPYVDRTPGPAFKILEPGRRERLGLKMANE 362
TPS A + + M + + TP R + TP G L G R L
Sbjct: 496 TPSRA---SLTKMESTASITRTPSRASPTWTPSTASPTGSPSTALAMGSPSRAALTRTPS 552
Query: 363 AAAKNRAKKQEALRRVTENLASLT----------------PKGLSPAMSP------ALQR 400
A+ R + +L T + ASLT P G+ SP AL
Sbjct: 553 RASLTRTPSRASL--TTPSRASLTRTPSTVLLTRMPPSASPTGMPSRTSPTGMPSSALLT 610
Query: 401 LVSRTASKYTDRALRASYTPSPARSTHLKTPASGLQT-------PTSTPAPGSATRTPLT 453
+ TAS T RAS T +P R++ TP T PT TP S T TP
Sbjct: 611 KMDSTAS-ITRTPPRASPTETPPRASPTGTPPRASPTGTPPRASPTGTPPRASPTGTPSR 669
Query: 454 QDP 456
P
Sbjct: 670 ASP 672
Score = 35.0 bits (79), Expect = 0.15
Identities = 27/113 (23%), Positives = 47/113 (41%), Gaps = 12/113 (10%)
Query: 339 TPGPAFKILEPGRRERLGLKMANEAAAKNRAKKQEALRRVTENLASLTPKGLSPAMSPAL 398
TP A +P R G+ ++ K ++ T +P G P SP
Sbjct: 397 TPSTASLTRKPPRASPTGM------LSRTSITKMDSTASPTRTPPRASPTGTPPRASP-- 448
Query: 399 QRLVSRTASKYTDRALRASYTPSPARSTHLKTPASGLQTPTSTPAPGSATRTP 451
+ T S+ + +++ +P+ + ST T + +PT +P+ S TRTP
Sbjct: 449 ----TGTPSRASPTGTQSTASPTGSPSTASPTGSPSTASPTGSPSRASLTRTP 497
Score = 34.7 bits (78), Expect = 0.19
Identities = 47/188 (25%), Positives = 68/188 (36%), Gaps = 30/188 (15%)
Query: 301 VATPSPAPGVNESPMMT--WGEVENTPLRVEGSETPYVDRTPGPAFKILEPGRRERLGLK 358
+A P+ P SP T + TP R + TP G + G R LK
Sbjct: 1 MAPPTRTPS-RASPTRTPSTASLTGTPSRASLTGTPSTASLMGTPSRASLTGTPPRASLK 59
Query: 359 MANEAAAKNRAKKQEALRRV-TENLASLTPKGLSPAMSP--------------------- 396
A+ + + +L R+ + +L + TP S P
Sbjct: 60 GTTSMASLMVSPSRASLTRMQSSSLLTRTPSMASLKRMPPRASRTRTLPRASLMRRPSTA 119
Query: 397 ALQRLVSRTASKYTDRALRASYTPSPARSTHLKTPASGLQTP-----TSTPAPGSATRTP 451
+L R SR + T S TPS A + + + AS +TP T TP+ S TRTP
Sbjct: 120 SLTRSPSRASLTTTPSRASLSMTPSTAAALTMPSRASLTRTPPRASLTMTPSTASLTRTP 179
Query: 452 LTQDPASI 459
P +
Sbjct: 180 PRASPTGM 187
Score = 34.3 bits (77), Expect = 0.25
Identities = 43/137 (31%), Positives = 53/137 (38%), Gaps = 21/137 (15%)
Query: 324 TPLRVEGSETPYVDRTPGPAFKILEPGRRERLGLKMANEAAAKNRAKKQEALRRVTENLA 383
TP R S TP + G R L + A+ +R + ++ R
Sbjct: 289 TPSRASLSMTPSTASLMRMLPRASPTGMLSRTSLTKMDSTASISRTPPRASITR------ 342
Query: 384 SLTPKGLSPAMSPALQRLVSRTASKYTDRALRASYTPSPARSTHLKTPASGLQTPTSTPA 443
TP SP P+ TAS T RAS T SP ST T S +PT TP
Sbjct: 343 --TPSRASPTGKPS-------TASP-TGTPSRASPTGSP--STASLTGLSSTASPTGTPP 390
Query: 444 PGSATRTPLTQDPASIT 460
S T TP T AS+T
Sbjct: 391 RASPTGTPST---ASLT 404
Score = 32.7 bits (73), Expect = 0.74
Identities = 43/163 (26%), Positives = 63/163 (38%), Gaps = 34/163 (20%)
Query: 303 TPSPAPGVNESPMMTWGEVENTPLRVEGSETPY---VDRTPGPAFKILEPGRRERLGLKM 359
TPS A + M + + TP R + TP + RTP A P R G+
Sbjct: 142 TPSTAAALT---MPSRASLTRTPPRASLTMTPSTASLTRTPPRASPTGMPSRTSPTGMPS 198
Query: 360 ANEAAAKNRAKKQEALRRVTENLASLTPKGLSPAMSPALQRLVSRTASKYTDRALRASYT 419
K ++ +T L+ +P G P SP T RAS +
Sbjct: 199 TASLT------KMDSTASITRTLSRASPTGTPPRASP-------------TGSPPRASLS 239
Query: 420 PSPARSTHLKTPASGLQTPTSTPAPGSATRTPLTQ--DPASIT 460
P+ + ++TP P ++P G +RT LT+ ASIT
Sbjct: 240 MMPSTALLIRTP------PRASPT-GMLSRTSLTKMDSTASIT 275
Score = 32.0 bits (71), Expect = 1.3
Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 20/107 (18%)
Query: 379 TENLASLTPKGLSPAMSPALQRLVSRTASKYTDRAL-------RASYTPSPARSTHLKTP 431
T + ASLT K P SP ++SRT+ D RAS T +P R++ TP
Sbjct: 397 TPSTASLTRK--PPRASPT--GMLSRTSITKMDSTASPTRTPPRASPTGTPPRASPTGTP 452
Query: 432 ASGLQT-------PTSTPAPGSATRTPLTQDPASITD--NLLQLPAR 469
+ T PT +P+ S T +P T P +L + P+R
Sbjct: 453 SRASPTGTQSTASPTGSPSTASPTGSPSTASPTGSPSRASLTRTPSR 499
Score = 30.0 bits (66), Expect = 4.8
Identities = 42/160 (26%), Positives = 69/160 (43%), Gaps = 28/160 (17%)
Query: 324 TPLRVEGSETP---YVDRTPGPAFKILEPGRRERLGL-------KMANEAA-AKNRAKKQ 372
TP R + +P + P A I P R G+ KM + A+ + ++
Sbjct: 223 TPPRASPTGSPPRASLSMMPSTALLIRTPPRASPTGMLSRTSLTKMDSTASITRTPSRPS 282
Query: 373 EALRRVTENLASLTPKGLSPAMSPALQR-----LVSRTASKYTDRAL-------RASYTP 420
A T + ASL+ + ++ L R ++SRT+ D RAS T
Sbjct: 283 TASPTGTPSRASLSMTPSTASLMRMLPRASPTGMLSRTSLTKMDSTASISRTPPRASITR 342
Query: 421 SPARSTHLKTPASGLQTPTSTPAPGSATRTPLTQDPASIT 460
+P+R++ P++ +PT TP+ S T +P T AS+T
Sbjct: 343 TPSRASPTGKPSTA--SPTGTPSRASPTGSPST---ASLT 377
>gi|38176300 nestin [Homo sapiens]
Length = 1621
Score = 37.0 bits (84), Expect = 0.039
Identities = 62/255 (24%), Positives = 88/255 (34%), Gaps = 41/255 (16%)
Query: 131 LEDGEAGEEEEKEPLPSLDVFLSRYTSEDNASFQEIMEVAKE--RSRARHAWLYQAEEEF 188
LE+ + EE +KE +L+ + E S + + E +E +S W E++
Sbjct: 900 LENLRSPEEVDKESQRNLEEEENLGKGEYQESLRSLEEEGQELPQSADVQRWEDTVEKDQ 959
Query: 189 EKRQK-----------DNLELPSAEHQAIESSQASVETWKYKAKNSLMYYPEGVPD---- 233
E Q+ D EL E + VE + A + EG P+
Sbjct: 960 ELAQESPPGMAGVENEDEAELNLREQDGFTGKEEVVEQGELNATEEVWIPGEGHPESPEP 1019
Query: 234 EEQLFKKPRQVVHKNTRFLRDPFSQALSRCQLQQAAALNAQHKQG-----------KVGP 282
+EQ V L+DP Q+ QQ A Q QG V P
Sbjct: 1020 KEQRGLVEGASVKGGAEGLQDPEGQS------QQVGAPGLQAPQGLPEAIEPLVEDDVAP 1073
Query: 283 DGKELIPQ----ESPRVGGFGFVATPSPAPGVN---ESPMMTWGEVENTPLRVEGSETPY 335
G + P+ P +G A P P GV + +T EV PL E E
Sbjct: 1074 GGDQASPEVMLGSEPAMGESAAGAEPGPGQGVGGLGDPGHLTREEVMEPPLEEESLEAKR 1133
Query: 336 VDRTPGPAFKILEPG 350
V GP + E G
Sbjct: 1134 VQGLEGPRKDLEEAG 1148
>gi|18379328 WW domain-containing adapter with a coiled-coil region
isoform 1 [Homo sapiens]
Length = 647
Score = 37.0 bits (84), Expect = 0.039
Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 3/111 (2%)
Query: 347 LEPGRRERLGLKMANEAAAKNRAKKQEALRRV-TENLAS-LTPKGLSPAMSPALQRLVSR 404
LE +R++ KMA + K+R ++E ++ T AS + K S A S Q ++S+
Sbjct: 164 LEREQRQKEANKMAVNSFPKDRDYRREVMQATATSGFASGMEDKHSSDASSLLPQNILSQ 223
Query: 405 TASKYTDRALRASYTPSPARSTHLKTPASGLQTPTSTPAPGSATRTPLTQD 455
T S++ DR R + + ST ++ P + PT+TP+ ++ L D
Sbjct: 224 T-SRHNDRDYRLPRAETHSSSTPVQHPIKPVVHPTATPSTVPSSPFTLQSD 273
>gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]
Length = 2817
Score = 37.0 bits (84), Expect = 0.039
Identities = 51/202 (25%), Positives = 81/202 (40%), Gaps = 34/202 (16%)
Query: 13 LPAASRPPRKREA--GEAGAATSKQRVLDEEEYIEGLQTVIQRDFFPDVEKLQAQKEYLE 70
L A PP R+A G G SKQ+V DE+E I + Q + VE+ + ++E
Sbjct: 412 LLAQQHPPPDRQAVPGRPGPFPSKQQVADEDE-IWKQRRRQQSEISAAVERARKRRE--- 467
Query: 71 AEENGDLERMRQIAI-----KFGSALGKMSREPPPPYVTPATFETPEVHAGTGVVGNKPR 125
EE +E R+ A + LG + ++P P + E K R
Sbjct: 468 -EEERRMEEQRKAACAEKLKRLDEKLGILEKQPSPEEIRERERE-------------KER 513
Query: 126 PRGRGLEDGEAGEEEEKEPLPSLDVFLSRYTSEDNASFQEIMEVAKERSRARHAWLYQAE 185
R + LE E +E EKE + E ++ E +E + R + E
Sbjct: 514 EREKELEK-EQEQEREKEREKDRE-----RQQEKEKELEKEQEKQREMEKERK---QEKE 564
Query: 186 EEFEKRQKDNLELPSAEHQAIE 207
+E E++++ EL + Q E
Sbjct: 565 KELERQKEKEKELQKMKEQEKE 586
Score = 31.2 bits (69), Expect = 2.2
Identities = 39/156 (25%), Positives = 61/156 (39%), Gaps = 10/156 (6%)
Query: 304 PSPAPGVNESPMMTWGEVENTPLRVEGSETPYVDRTPGPAFKILEPGRRERLGLKMANEA 363
P P + ++ ++ N V + P V P + + G E + K
Sbjct: 1634 PGPKKPKEKVDALSQFDLNNYASVVIIDDHPEVTVIEDPQSNLNDDGFTEVVSKKQQKRL 1693
Query: 364 AAKNRAKKQEALRRVTENLASLTPKGLSPAMSPALQRLVSRTASKYTDRALRASYTPS-P 422
+ R KK+E + +V N + KG S +L R A K +A + S P
Sbjct: 1694 QDEERRKKEEQVIQVW-NKKNANEKGRSQT-----SKLPPRFAKKQATGIQQAQSSASVP 1747
Query: 423 ARSTHLKTPASGLQTPTSTPAPGSATRTPLTQDPAS 458
++ P++ P ST AP AT TP+ PAS
Sbjct: 1748 PLASAPLPPSTSASVPASTSAPLPATLTPV---PAS 1780
Score = 30.8 bits (68), Expect = 2.8
Identities = 44/189 (23%), Positives = 67/189 (35%), Gaps = 34/189 (17%)
Query: 87 FGSALGKMSREPPPPYVTPATFETPEVHAGTGVVGNKP---------------------- 124
F G S PPPP + P+ A G G P
Sbjct: 396 FNQERGTSSHLPPPPKLLAQQHPPPDRQAVPGRPGPFPSKQQVADEDEIWKQRRRQQSEI 455
Query: 125 -----RPRGRGLEDGEAGEEEEK----EPLPSLDVFLSRYTSEDNASFQEIMEVAKERSR 175
R R R E+ EE+ K E L LD L E S +EI E +E+ R
Sbjct: 456 SAAVERARKRREEEERRMEEQRKAACAEKLKRLDEKLG--ILEKQPSPEEIREREREKER 513
Query: 176 ARHAWL-YQAEEEFEKRQKDNLELPSAEHQAIESSQASVETWKYKAKNSLMYYPEGVPDE 234
R L + E+E EK ++ + E + + +E Q + + K E ++
Sbjct: 514 EREKELEKEQEQEREKEREKDRERQQEKEKELEKEQEKQREMEKERKQEKEKELERQKEK 573
Query: 235 EQLFKKPRQ 243
E+ +K ++
Sbjct: 574 EKELQKMKE 582
>gi|19923559 EMSY protein [Homo sapiens]
Length = 1322
Score = 36.6 bits (83), Expect = 0.051
Identities = 35/130 (26%), Positives = 51/130 (39%), Gaps = 18/130 (13%)
Query: 355 LGLKMANEAAAKNRAKKQEALRRVTENLASLTPKGLSP------AMSPALQRLVSRTASK 408
L + A RA E L + N++ P S + P + RLV +TA
Sbjct: 56 LSISTERHRAEVRRAVNDERLTTIAHNMSG--PNSSSEWSIEGRRLVPLMPRLVPQTAFT 113
Query: 409 YTDRAL------RASYTPSPARSTHLKTPA----SGLQTPTSTPAPGSATRTPLTQDPAS 458
T A+ + P PA + + S TPTSTP P + T + PAS
Sbjct: 114 VTANAVANAAIQHNASLPVPAETGSKEVVCYSYTSTTSTPTSTPVPSGSIATVKSPRPAS 173
Query: 459 ITDNLLQLPA 468
N++ LP+
Sbjct: 174 PASNVVVLPS 183
>gi|51173717 actin-binding LIM protein 1 isoform s [Homo sapiens]
Length = 455
Score = 36.6 bits (83), Expect = 0.051
Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 7/115 (6%)
Query: 331 SETPYV--DRTPGP-AFKILEPGRRERL-GLKMANEAAAKNRAKKQEALRRVTENLASLT 386
SETP + D PGP +F ++ P + R G + +E + R ++E L ++ L L
Sbjct: 236 SETPKIETDHWPGPPSFAVVGPDMKRRSSGREEDDEELLRRRQLQEEQLMKLNSGLGQLI 295
Query: 387 PKGLSPAMSPALQRLVSRTASKYTDRALRASYTPSPARSTHLKTPASGLQTPTST 441
L M + S AS+Y AS+ PS ++ +GL P ST
Sbjct: 296 ---LKEEMEKESRERSSLLASRYDSPINSASHIPSSKTASLPGYGRNGLHRPVST 347
>gi|51173715 actin-binding LIM protein 1 isoform c [Homo sapiens]
Length = 746
Score = 36.6 bits (83), Expect = 0.051
Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 7/115 (6%)
Query: 331 SETPYV--DRTPGP-AFKILEPGRRERL-GLKMANEAAAKNRAKKQEALRRVTENLASLT 386
SETP + D PGP +F ++ P + R G + +E + R ++E L ++ L L
Sbjct: 527 SETPKIETDHWPGPPSFAVVGPDMKRRSSGREEDDEELLRRRQLQEEQLMKLNSGLGQLI 586
Query: 387 PKGLSPAMSPALQRLVSRTASKYTDRALRASYTPSPARSTHLKTPASGLQTPTST 441
L M + S AS+Y AS+ PS ++ +GL P ST
Sbjct: 587 ---LKEEMEKESRERSSLLASRYDSPINSASHIPSSKTASLPGYGRNGLHRPVST 638
>gi|51173713 actin-binding LIM protein 1 isoform b [Homo sapiens]
Length = 718
Score = 36.6 bits (83), Expect = 0.051
Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 7/115 (6%)
Query: 331 SETPYV--DRTPGP-AFKILEPGRRERL-GLKMANEAAAKNRAKKQEALRRVTENLASLT 386
SETP + D PGP +F ++ P + R G + +E + R ++E L ++ L L
Sbjct: 499 SETPKIETDHWPGPPSFAVVGPDMKRRSSGREEDDEELLRRRQLQEEQLMKLNSGLGQLI 558
Query: 387 PKGLSPAMSPALQRLVSRTASKYTDRALRASYTPSPARSTHLKTPASGLQTPTST 441
L M + S AS+Y AS+ PS ++ +GL P ST
Sbjct: 559 ---LKEEMEKESRERSSLLASRYDSPINSASHIPSSKTASLPGYGRNGLHRPVST 610
>gi|51173711 actin-binding LIM protein 1 isoform a [Homo sapiens]
Length = 778
Score = 36.6 bits (83), Expect = 0.051
Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 7/115 (6%)
Query: 331 SETPYV--DRTPGP-AFKILEPGRRERL-GLKMANEAAAKNRAKKQEALRRVTENLASLT 386
SETP + D PGP +F ++ P + R G + +E + R ++E L ++ L L
Sbjct: 559 SETPKIETDHWPGPPSFAVVGPDMKRRSSGREEDDEELLRRRQLQEEQLMKLNSGLGQLI 618
Query: 387 PKGLSPAMSPALQRLVSRTASKYTDRALRASYTPSPARSTHLKTPASGLQTPTST 441
L M + S AS+Y AS+ PS ++ +GL P ST
Sbjct: 619 ---LKEEMEKESRERSSLLASRYDSPINSASHIPSSKTASLPGYGRNGLHRPVST 670
>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 36.2 bits (82), Expect = 0.067
Identities = 64/320 (20%), Positives = 119/320 (37%), Gaps = 29/320 (9%)
Query: 132 EDGEAGEEEEKEPLPSLDVFLSRYTSEDNASFQEIMEVAKERSRARHAWLYQAEEEFEKR 191
E+ E GEEE K P P+ + S + + + E AK + A+ +A+ E +
Sbjct: 492 EEAEGGEEETKSP-PAEEA-----ASPEKEAKSPVKEEAKSPAEAKSPEKEEAKSPAEVK 545
Query: 192 QKDNLELPSAEHQAIESSQASVETWKYKAKNSLMYYPEGVPDEEQLFKKPRQVVHKNTRF 251
+ + P+ E S E K +AK+ P E + +K + + +
Sbjct: 546 SPEKAKSPAKEEAKSPPEAKSPE--KEEAKS---------PAEVKSPEKAKSPAKEEAKS 594
Query: 252 LRDPFSQALSRCQLQQAAALNAQHKQGKVGPDGKELIPQESPRVGGFGFVATPSPAPGVN 311
+ S ++ +++ A A+ K V + K +SP SP
Sbjct: 595 PAEAKSPEKAKSPVKEEAKSPAEAKS-PVKEEAKSPAEVKSPE-------KAKSPTKEEA 646
Query: 312 ESPMMTWGEVENTPLRVEGSETPYVDRTPGPAFKILEPGRRERLGLKMANEAAAKNRAKK 371
+SP + E +++P P K P + E + A ++ K AK
Sbjct: 647 KSPEKAKSPEKEEAKSPEKAKSPVKAEAKSPE-KAKSPVKAEAKSPEKA-KSPVKEEAKS 704
Query: 372 QEALRRVTENLASLTPKGLSPAMSPALQRLVSRTASKYTDRALRASYTPSPARSTHLKTP 431
E + + A K SP A +++ K ++ + +P A++ +K+P
Sbjct: 705 PEKAKSPVKEEAKSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPEKAKTLDVKSP 764
Query: 432 ASGLQTPTSTPAPGSATRTP 451
+ +TP A A + P
Sbjct: 765 EA--KTPAKEEARSPADKFP 782
>gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens]
Length = 2303
Score = 36.2 bits (82), Expect = 0.067
Identities = 67/292 (22%), Positives = 113/292 (38%), Gaps = 50/292 (17%)
Query: 197 ELPSAEHQAIESSQASVETWKYKA----------KNSLMYYPEGVPDEEQLFKKPRQVVH 246
+L S E +AI+ S+ TW ++A +S++ + G+ L + P+ H
Sbjct: 1680 DLDSVEWRAIQEGANSIVTWLHQAAAATREASSESDSILSFVSGLSVGSTL-QPPK---H 1735
Query: 247 KNTRFLRDPFSQALSRCQLQQAAALNAQHKQGKVGPDGKELIPQESPRVG----GFGFVA 302
+ R A + A+ + + GP+ + +P V G +
Sbjct: 1736 RKGRQAEGEMGSARRPEKRGAASVKTSGSPRSPAGPEKPRGTQKTTPGVPAVLRGRTVIY 1795
Query: 303 TPSPAPGVNESPMMTWGEVENTPLRVEGSETPYVDRTPGPAFKILEPGRRERLGLKMANE 362
PSPAP P T G TP +V P + + PA K+ PG++ L
Sbjct: 1796 VPSPAP--RAQPKGTPGP-RATPRKVA---PPCLAQPAAPA-KVPSPGQQRSRSL----- 1843
Query: 363 AAAKNRAKKQEALRRVTENLASLTPKGLSPAMSPALQRLVSRTASKYTDRALRASYTPSP 422
+R K L +++ S TP PA +++T S + + AS P P
Sbjct: 1844 ----HRPAKTSELATLSQPPRSATP----PAR-------LAKTPSSSSSQTSPASQ-PLP 1887
Query: 423 ARSTHLKTPASGLQTPTSTPAPGSATRTPLTQ----DPASITDNLLQLPARR 470
+ + A L P ++P P + RT L + + + +Q PARR
Sbjct: 1888 RKRPPVTQAAGALPGPGASPVPKTPARTLLAKQHKTQRSPVRIPFMQRPARR 1939
>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
Length = 1270
Score = 35.8 bits (81), Expect = 0.087
Identities = 42/151 (27%), Positives = 59/151 (39%), Gaps = 13/151 (8%)
Query: 306 PAPGVNESPMMTWGEV-------ENTPLRVEGSE-TPYVDRTPGPAFKILEPGRRERLGL 357
PAP E+P T EV E T + E TP + P P K LE +E G+
Sbjct: 708 PAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELSAEPTP--KALENSPKEP-GV 764
Query: 358 KMANEAAAKNRAKKQEALRRVTENLASLTPKGLSPAMSPALQRLVSRTASKYTDRALRAS 417
AA A + TE TP+ + A P + + + T K T+ + A+
Sbjct: 765 PTTKTPAATKPEMTTTAKDKTTERDLRTTPETTTAA--PKMTKETATTTEKTTESKITAT 822
Query: 418 YTPSPARSTHLKTPASGLQTPTSTPAPGSAT 448
T + +T TP T+T AP T
Sbjct: 823 TTQVTSTTTQDTTPFKITTLKTTTLAPKVTT 853
>gi|189181722 proteoglycan 4 isoform C [Homo sapiens]
Length = 1311
Score = 35.8 bits (81), Expect = 0.087
Identities = 42/151 (27%), Positives = 59/151 (39%), Gaps = 13/151 (8%)
Query: 306 PAPGVNESPMMTWGEV-------ENTPLRVEGSE-TPYVDRTPGPAFKILEPGRRERLGL 357
PAP E+P T EV E T + E TP + P P K LE +E G+
Sbjct: 749 PAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELSAEPTP--KALENSPKEP-GV 805
Query: 358 KMANEAAAKNRAKKQEALRRVTENLASLTPKGLSPAMSPALQRLVSRTASKYTDRALRAS 417
AA A + TE TP+ + A P + + + T K T+ + A+
Sbjct: 806 PTTKTPAATKPEMTTTAKDKTTERDLRTTPETTTAA--PKMTKETATTTEKTTESKITAT 863
Query: 418 YTPSPARSTHLKTPASGLQTPTSTPAPGSAT 448
T + +T TP T+T AP T
Sbjct: 864 TTQVTSTTTQDTTPFKITTLKTTTLAPKVTT 894
>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
Length = 1363
Score = 35.8 bits (81), Expect = 0.087
Identities = 42/151 (27%), Positives = 59/151 (39%), Gaps = 13/151 (8%)
Query: 306 PAPGVNESPMMTWGEV-------ENTPLRVEGSE-TPYVDRTPGPAFKILEPGRRERLGL 357
PAP E+P T EV E T + E TP + P P K LE +E G+
Sbjct: 801 PAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELSAEPTP--KALENSPKEP-GV 857
Query: 358 KMANEAAAKNRAKKQEALRRVTENLASLTPKGLSPAMSPALQRLVSRTASKYTDRALRAS 417
AA A + TE TP+ + A P + + + T K T+ + A+
Sbjct: 858 PTTKTPAATKPEMTTTAKDKTTERDLRTTPETTTAA--PKMTKETATTTEKTTESKITAT 915
Query: 418 YTPSPARSTHLKTPASGLQTPTSTPAPGSAT 448
T + +T TP T+T AP T
Sbjct: 916 TTQVTSTTTQDTTPFKITTLKTTTLAPKVTT 946
>gi|67190163 proteoglycan 4 isoform A [Homo sapiens]
Length = 1404
Score = 35.8 bits (81), Expect = 0.087
Identities = 42/151 (27%), Positives = 59/151 (39%), Gaps = 13/151 (8%)
Query: 306 PAPGVNESPMMTWGEV-------ENTPLRVEGSE-TPYVDRTPGPAFKILEPGRRERLGL 357
PAP E+P T EV E T + E TP + P P K LE +E G+
Sbjct: 842 PAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELSAEPTP--KALENSPKEP-GV 898
Query: 358 KMANEAAAKNRAKKQEALRRVTENLASLTPKGLSPAMSPALQRLVSRTASKYTDRALRAS 417
AA A + TE TP+ + A P + + + T K T+ + A+
Sbjct: 899 PTTKTPAATKPEMTTTAKDKTTERDLRTTPETTTAA--PKMTKETATTTEKTTESKITAT 956
Query: 418 YTPSPARSTHLKTPASGLQTPTSTPAPGSAT 448
T + +T TP T+T AP T
Sbjct: 957 TTQVTSTTTQDTTPFKITTLKTTTLAPKVTT 987
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 35.8 bits (81), Expect = 0.087
Identities = 52/214 (24%), Positives = 77/214 (35%), Gaps = 31/214 (14%)
Query: 265 LQQAAALNAQHKQGKVGPDGKELIPQESPRVGGFGFVATPSPAPGVNESPMMTWGEVENT 324
L A A+ + + G G IP+ +PR G P+ G P +NT
Sbjct: 47 LGAAGAVGRKPLAERAGGIGGATIPESAPRAGPTRTSRPPASGRGERAPP------AKNT 100
Query: 325 PLRVEGSETPYVDRTPGPAFKILEPGRRERLGLKM-ANEAAAKNRA----KKQEALRRVT 379
+P +PG A PG + GL++ A E A+ +A K+
Sbjct: 101 --------SPGPVSSPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGAR 152
Query: 380 ENLASLTPKGLSPAMSPALQRLVSRTASKYTDRALRASYTPSPARSTHLKTPASGLQTPT 439
+ + TP SPAM+ R+ + T+ L P PA S + P G +
Sbjct: 153 RDTSGPTPGTPSPAMA-------RRSRAAGTEVGL-----PRPAPSARPRPPTEGPRKSV 200
Query: 440 STPAPGSATRTPLTQDPASITDNLLQLPARRKAS 473
S+ + S T LQ PA R S
Sbjct: 201 SSASEHSTTEPSPAARRRPSAGGGLQRPASRSLS 234
Score = 34.3 bits (77), Expect = 0.25
Identities = 60/220 (27%), Positives = 81/220 (36%), Gaps = 38/220 (17%)
Query: 282 PDGKELIPQESPR--VGGFGFVATPSPAPGVNESPMMTWG---------EVENTPLRVEG 330
P + P E PR V +T P+P P G TPL
Sbjct: 185 PSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPA 244
Query: 331 SETPYVDRTP-GPAFKILEPGRRERLGLK-MANEAAAKNRAKKQEALRRVTEN-LASLTP 387
P TP PA P + + GL+ + R AL ++ + LA+ +P
Sbjct: 245 RSGPSARGTPRAPA----HPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSP 300
Query: 388 KGL-SPAMSPALQRLVSRTASKYTDRA-------LRA--SYTPSPARSTHLKTPASG--- 434
SP+ P+LQ L S A+ + L+A S+ PSP S P
Sbjct: 301 SAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPA 360
Query: 435 -----LQTPTSTPA--PGSATRTPLTQDPASITDNLLQLP 467
LQ P S PA P S TP Q P ++ +LLQ P
Sbjct: 361 LALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAP 400
Score = 31.6 bits (70), Expect = 1.6
Identities = 29/85 (34%), Positives = 36/85 (42%), Gaps = 8/85 (9%)
Query: 391 SPAMSPALQRLVSRTASKYTDRALRASYTPSPARSTHLKTPASGLQTPTSTPA--PGSAT 448
SP SP L L T S AL +P P+ +Q P S PA P S +
Sbjct: 371 SPPASPPLSPLA--TPSPQAPNALAVHLLQAPFSPP----PSPPVQAPFSPPASPPVSPS 424
Query: 449 RTPLTQDPASITDNLLQLPARRKAS 473
TP +Q P S+ LQ+P AS
Sbjct: 425 ATPPSQAPPSLAAPPLQVPPSPPAS 449
>gi|90669307 cyclin B3 isoform 3 [Homo sapiens]
Length = 1395
Score = 35.0 bits (79), Expect = 0.15
Identities = 41/177 (23%), Positives = 73/177 (41%), Gaps = 9/177 (5%)
Query: 141 EKEPLPSLDVFLSRYTSEDNASFQEIMEVAKERSRARHAWLYQAEEEFEKRQKDNL---E 197
++EP + L T + A F+E + + +E S + A L + + E K+ L E
Sbjct: 805 QEEPSIEKEAVLKEPTIDTEAHFKEPLALQEEPSTEKEAVLKEPSVDTEAHFKETLALQE 864
Query: 198 LPSAEHQAIESSQASVETWKYKAKNSLMYYPEGVPDEEQLFKKPRQVVHKNTRFLRDPFS 257
PS E +A+ +++ W+ + + E + +E+ K ++ K +
Sbjct: 865 KPSIEQEALFKRHSAL--WEKPSTEKETIFKESLDLQEKPSIKKETLLKKPLALKMSTIN 922
Query: 258 QALSRCQLQQAAALNAQHKQGKVGPDGKELIPQESPRVGGFGFVATPSPAPGVNESP 314
+A+ + ALN + GK + L QESP F+ T P V SP
Sbjct: 923 EAV---LFEDMIALNEKPTTGKELSFKEPLALQESPTYKEDTFLKT-LLVPQVGTSP 975
>gi|9910266 kinesin family member 15 [Homo sapiens]
Length = 1388
Score = 35.0 bits (79), Expect = 0.15
Identities = 40/158 (25%), Positives = 63/158 (39%), Gaps = 25/158 (15%)
Query: 61 KLQAQKEYLEAEENGDLERMRQIAIKFGSALGKMSREPPPPYVTPATFETPEVHAGTGVV 120
KL +KE +E ++N +MRQ+ SA E P TP F+T +
Sbjct: 1106 KLNQKKEEVEQKKNEYNFKMRQLEHVMDSAA-----EDPQSPKTPPHFQTH--------L 1152
Query: 121 GNKPRPRGRGLEDGEAGEEEEKEPLPSLDVFLSRYTSEDNASFQEIMEVAKERSRAR--- 177
+ + +EDG A K L L L+ NA + E +E R
Sbjct: 1153 AKLLETQEQEIEDGRAS----KTSLEHLVTKLNEDREVKNAEILRMKEQLREMENLRLES 1208
Query: 178 -----HAWLYQAEEEFEKRQKDNLELPSAEHQAIESSQ 210
WL Q + + KRQK+N + ++Q +++ Q
Sbjct: 1209 QQLIEKNWLLQGQLDDIKRQKENSDQNHPDNQQLKNEQ 1246
>gi|27262622 neuron navigator 1 [Homo sapiens]
Length = 1874
Score = 35.0 bits (79), Expect = 0.15
Identities = 49/199 (24%), Positives = 76/199 (38%), Gaps = 31/199 (15%)
Query: 283 DGKELIPQESPRVGGFGFVATPSPAPGVNESPMMTWGEVENTPLRVEGSETPYVDRTPGP 342
DG+ ++P+ + GG G +A S A E + G V++ RV G GP
Sbjct: 38 DGRGMLPKRAKAPGGGGGMAKASAA----ELKVFKSGSVDS---RVPG----------GP 80
Query: 343 AFKILEPGRRERLGLKMANEAAAKNRAKKQEALRRVTENLASLTPKGLSPAMSPALQR-L 401
P R + N + + KK + + + PKGL S + L
Sbjct: 81 ------PASNLRKQKSLTNLSFLTDSEKKLQLYEPEWSDDMAKAPKGLGKVGSKGREAPL 134
Query: 402 VSRTASKYTDRALRASYTPSPARSTHLKTPASGLQTPTSTPAPGSATRTPLTQDPASIT- 460
+S+T SK +A +P+ T L A L P+ P A PL++ P +
Sbjct: 135 MSKTLSKSEHSLFQAKGSPAGGAKTPLAPLAPNLGKPSRIPRGPYAEVKPLSKAPEAAVS 194
Query: 461 ------DNLLQLPARRKAS 473
D LL A+ + S
Sbjct: 195 EDGKSDDELLSSKAKAQKS 213
>gi|32140760 collagen, type XXVII, alpha 1 [Homo sapiens]
Length = 1860
Score = 34.7 bits (78), Expect = 0.19
Identities = 39/162 (24%), Positives = 56/162 (34%), Gaps = 11/162 (6%)
Query: 293 PRVGGFGFVATPSPAPGVNESPMMTWGEVENTPLRVEGSETPYVDRTPGPAFKILEPGRR 352
P V SP P +P T +V + P R PA K ++
Sbjct: 372 PSAPSTSIVPIKSPHPTQKTAPSSFTKSALPTQKQVPPTSRPVPARVSRPAEKPIQ---- 427
Query: 353 ERLGLKMANEAAAKNRAKKQEALRRVTENLASLTPKGLSPAMSPALQRLVSRTASKYTDR 412
G+ + + + ++ LA K S A PA R + +T
Sbjct: 428 RNPGMPRPPPPSTRPLPPTTSSSKKPIPTLARTEAKITSHASKPASARTSTHKPPPFTAL 487
Query: 413 ALRASYTPSPARSTH----LKTPASGLQTPTSTPA---PGSA 447
+ + TP RST + P SG TP + PA PGSA
Sbjct: 488 SSSPAPTPGSTRSTRPPATMVPPTSGTSTPRTAPAVPTPGSA 529
Score = 29.6 bits (65), Expect = 6.3
Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 7/84 (8%)
Query: 277 QGKVGPDGKELIPQESPRVGGFGFVATPSPA--PGVNESPMMTWGEVENTPLRVEGSETP 334
QG+ G G++ + E +G GF P P+ PG P + P+ G P
Sbjct: 1089 QGRPGRPGQQGVAGERGHLGSRGFPGIPGPSGPPGTKGLPGEPGPQGPQGPIGPPGEMGP 1148
Query: 335 YVDRTPGPAFKILEPGRRERLGLK 358
GP + EPG G+K
Sbjct: 1149 -----KGPPGAVGEPGLPGEAGMK 1167
>gi|34365793 WNK lysine deficient protein kinase 4 [Homo sapiens]
Length = 1243
Score = 34.3 bits (77), Expect = 0.25
Identities = 43/162 (26%), Positives = 60/162 (37%), Gaps = 17/162 (10%)
Query: 228 PEGVPDEEQLFKKPRQVVHKNTRFLRDPFSQALSRCQLQQAAALNAQHKQGKVGPDGKEL 287
P G + +L PR+ + + P S LSR L++ PD
Sbjct: 27 PLGTAGQPRLGPPPRRARRFSGKAEPRPRSSRLSRRSSVDLGLLSSWSLPASPAPD---- 82
Query: 288 IPQESPRVGGFGFVATPSPAPGVNESPMMTWGEVENTPLRVEGSETPYVDRTPGPAFKIL 347
P + P G G SP P E P TW E P V+ +E P A +
Sbjct: 83 -PPDPPDSAGPG--PARSPPPSSKEPPEGTW--TEGAP--VKAAEDSARPELPDSA---V 132
Query: 348 EPGRRERLGLKMANEAAAKNRAKKQEALRRVTENLASLTPKG 389
PG RE L + EA A R ++QE + + +P G
Sbjct: 133 GPGSREPLRVP---EAVALERRREQEEKEDMETQAVATSPDG 171
>gi|239747867 PREDICTED: hypothetical protein [Homo sapiens]
Length = 384
Score = 34.3 bits (77), Expect = 0.25
Identities = 60/211 (28%), Positives = 78/211 (36%), Gaps = 29/211 (13%)
Query: 258 QALSRCQLQQAAALNAQHKQGKVGPDGKELIPQESPRVGGFGFVATPSPAPGVNESPMMT 317
QA+ +Q + A ++ + G L P E G G V PSP PG P +
Sbjct: 83 QAVHASGMQHIPSAQASKQRSRGGAQPSTLSPAEELLRPGAGAVGLPSPDPG----PAPS 138
Query: 318 WGEVENTP-LRVEGSETPYVDR---------TPGPAFKILEPGRRERL--GLKMANEAAA 365
++ P L V+ PY T + L+ G L NEA
Sbjct: 139 GKKLPAGPDLVVQSRAAPYPSGEGWGAQGTCTQAQKWAGLQAGSTHNALWTLGRGNEAVK 198
Query: 366 KNRAKK--QEALRRVTENLASLTPKG-----LSP-AMSPALQRLVSRTASKYTD--RALR 415
+ K+ +EAL +T+ L P G L P A SP L SK D A R
Sbjct: 199 EEGMKEGVKEAL-TITKESRELLPPGSAGCSLGPWAQSPQLLESCCSDLSKSADGTEAPR 257
Query: 416 ASYTPSPARSTHLKTPASGLQTP-TSTPAPG 445
A + SP L PA GL P P PG
Sbjct: 258 AGWRGSPGARGPLLPPA-GLSPPRRCQPQPG 287
>gi|58761544 amine oxidase (flavin containing) domain 2 isoform a
[Homo sapiens]
Length = 876
Score = 33.9 bits (76), Expect = 0.33
Identities = 48/199 (24%), Positives = 70/199 (35%), Gaps = 39/199 (19%)
Query: 2 ETPGASA-SSLLLPAASRPPRKREAGEAGAATSKQRVLDEEEYIEGLQT-------VIQR 53
E P AS L P S P+ G+AT + + E EG +T V R
Sbjct: 64 EPPRASPPGGLAEPPGSAGPQAGPTVVPGSATPMETGIAETP--EGRRTSRRKRAKVEYR 121
Query: 54 DFFPDVEKLQAQKEYLEAEENGDLERMRQIAIKFGSALGKMSREPPPPYVTPATFETPEV 113
+ + L + Y E E N E+ +++ PPPP P E
Sbjct: 122 EMDESLANLSEDEYYSEEERNAKAEKEKKLP-------------PPPPQAPPEEENESEP 168
Query: 114 HAGTGVVGNKPRPRGRGLEDGEAGEEEE---KEPLPSLDVFLSRYTSEDNASFQEIMEVA 170
+G G G DG+A E + LP R TS++ A F +I+
Sbjct: 169 EEPSGQAGGLQDDSSGGYGDGQASGVEGAAFQSRLPH-----DRMTSQEAACFPDIISGP 223
Query: 171 KE--------RSRARHAWL 181
++ R+R WL
Sbjct: 224 QQTQKVFLFIRNRTLQLWL 242
>gi|83921602 solute carrier family 38, member 10 isoform a [Homo
sapiens]
Length = 1119
Score = 33.9 bits (76), Expect = 0.33
Identities = 71/294 (24%), Positives = 108/294 (36%), Gaps = 45/294 (15%)
Query: 13 LPAASRPPRKREAGEAGAATSKQRVLDEE-EYIEGLQTVIQRDFFPDVEKLQAQKEYLEA 71
LP + R ++ E GE G + + L+E + E Q V + D P V Q KE L
Sbjct: 542 LPDSEREKQEPEQGEVGKRPGQAQALEEAGDLPEDPQKVPEADGQPAV---QPAKEDLGP 598
Query: 72 EENGDLERMRQIAIKFGSAL----GKMSREPPPPYVTPATFETPEVHAGTGVVGNKPRPR 127
+ G R + + + + L G+ ++ PPP GN
Sbjct: 599 GDRGLHPRPQAVLSEQQNGLAVGGGEKAKGGPPP-------------------GNAAGDT 639
Query: 128 GRGLEDGEAGEE-----EEKEPLPSLDVFLSRYTSEDNASFQEIMEVAKERSRAR---HA 179
G+ ED + G + E+ P P L + A + +E RA HA
Sbjct: 640 GQPAEDSDHGGKPPLPAEKPAPGPGLPPEPREQRDVERAGGNQAASQLEEAGRAEMLDHA 699
Query: 180 WLYQAEEEFEKRQKDNLE-----LPSAEHQAIESSQASVETWKYKAKNSLMYYPEG--VP 232
L Q +E + +QK L+ L E Q E Q E + K + ++ G VP
Sbjct: 700 VLLQVIKEQQVQQKRLLDQQEKLLAVIEEQHKEIHQQRQEDEEDKPRQVEVHQEPGAAVP 759
Query: 233 -DEEQLFKKPRQVVHKNTRFLRDPFSQALS--RCQLQQAAALNAQHKQGKVGPD 283
+E K R+ V DP +A Q + +H +G VG D
Sbjct: 760 RGQEAPEGKARETVENLPPLPLDPVLRAPGGRPAPSQDLNQRSLEHSEGPVGRD 813
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.128 0.362
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,612,256
Number of Sequences: 37866
Number of extensions: 1197895
Number of successful extensions: 6284
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 210
Number of HSP's that attempted gapping in prelim test: 5531
Number of HSP's gapped (non-prelim): 926
length of query: 476
length of database: 18,247,518
effective HSP length: 106
effective length of query: 370
effective length of database: 14,233,722
effective search space: 5266477140
effective search space used: 5266477140
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.