Guide to the Human Genome
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Name: BLZF1 Sequence: fasta or formatted (400aa) NCBI GI: 4504805
Description:

basic leucine zipper nuclear factor 1

Referenced in:

Rab

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         25           2
 C cysteine            1.5          6           2
 D aspartate           2.8         11           2
 E glutamate           9.8         39           2
 F phenylalanine       2.2          9           2
 G glycine             4.8         19           1
 H histidine           3.0         12           2
 I isoleucine          3.8         15           1
 K lysine              8.0         32           2
 L leucine            11.5         46           2
 M methionine          2.0          8           1
 N asparagine          5.8         23           2
 P proline             4.5         18           2
 Q glutamine           5.5         22           1
 R arginine            5.8         23           2
 S serine              8.0         32           2
 T threonine           6.5         26           2
 V valine              6.8         27           1
 W tryptophan          0.8          3           1
 Y tyrosine            1.0          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   basic leucine zipper nuclear factor 1 
MYH10                 0.029   myosin, heavy polypeptide 10, non-muscle 
WDR87                 0.027   NYD-SP11 protein 
CGNL1                 0.027   cingulin-like 1 
CEP110                0.027   centrosomal protein 110kDa 
GOLGA6D               0.026   golgi autoantigen, golgin subfamily a, 6D 
GOLGA6C               0.026   PREDICTED: golgi autoantigen, golgin subfamily a, 6C...
GOLGA6                0.026   golgi autoantigen, golgin subfamily a, 6 
CROCC                 0.026   ciliary rootlet coiled-coil 
CCDC88A               0.025   coiled-coil domain containing 88A isoform 2 
CCDC88A               0.025   coiled-coil domain containing 88A isoform 1 
MYH9                  0.025   myosin, heavy polypeptide 9, non-muscle 
DSP                   0.025   desmoplakin isoform I 
UACA                  0.025   uveal autoantigen with coiled-coil domains and ankyr...
UACA                  0.025   uveal autoantigen with coiled-coil domains and ankyr...
AKAP9                 0.024   A-kinase anchor protein 9 isoform 2 
AKAP9                 0.024   A-kinase anchor protein 9 isoform 3 
LOC728636             0.022   PREDICTED: similar to golgi autoantigen, golgin sub...
LOC440295             0.022   hypothetical protein LOC440295 
CCDC11                0.022   coiled-coil domain containing 11 
LOC100133220          0.022   PREDICTED: hypothetical protein 
LOC647042             0.022   PREDICTED: hypothetical protein isoform 2 
CEP290                0.021   centrosomal protein 290kDa 
RAB11FIP3             0.021   rab11-family interacting protein 3 isoform 2 
RAB11FIP3             0.021   rab11-family interacting protein 3 isoform 1 
CDC42BPB              0.021   CDC42-binding protein kinase beta 
MYH13                 0.020   myosin, heavy polypeptide 13, skeletal muscle [Homo...
FAM184A               0.020   hypothetical protein LOC79632 isoform 2 
FAM184A               0.020   hypothetical protein LOC79632 isoform 1 
TPR                   0.020   nuclear pore complex-associated protein TPR 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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