Guide to the Human Genome
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Search of human proteins with 4504517

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4504517 heat shock protein beta-1 [Homo sapiens]
         (205 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4504517 heat shock protein beta-1 [Homo sapiens]                   424   e-119
gi|4503057 crystallin, alpha B [Homo sapiens]                         124   7e-29
gi|7657146 heat shock 22kDa protein 8 [Homo sapiens]                  115   3e-26
gi|4503055 crystallin, alpha A [Homo sapiens]                         108   2e-24
gi|4504519 heat shock 27kDa protein 2 [Homo sapiens]                  100   9e-22
gi|21389433 heat shock protein, alpha-crystallin-related, B6 [Ho...   100   1e-21
gi|5453688 heat shock 27kDa protein 3 [Homo sapiens]                   69   4e-12
gi|7657202 cardiovascular heat shock protein [Homo sapiens]            54   7e-08
gi|194248060 outer dense fiber of sperm tails 1 [Homo sapiens]         44   1e-04
gi|15082238 heat shock protein, alpha-crystallin-related, B9 [Ho...    40   0.001
gi|4504211 guanylate cyclase 1, soluble, alpha 2 [Homo sapiens]        33   0.13 
gi|90819231 myeloid/lymphoid or mixed-lineage leukemia (trithora...    33   0.17 
gi|242117953 SH3 domain-containing protein C1orf113 isoform 1 [H...    32   0.49 
gi|242117948 SH3 domain-containing protein C1orf113 isoform 2 [H...    32   0.49 
gi|22003858 ventricular zone expressed PH domain homolog 1 [Homo...    32   0.49 
gi|213385278 TNF receptor-associated factor 3 interacting protei...    31   0.84 
gi|20070262 TNF receptor-associated factor 3 interacting protein...    31   0.84 
gi|26787962 advanced glycosylation end product-specific receptor...    30   1.9  
gi|145309302 cell division cycle 2-like 5 isoform 1 [Homo sapiens]     30   1.9  
gi|145309300 cell division cycle 2-like 5 isoform 2 [Homo sapiens]     30   1.9  
gi|14150066 spermatogenesis associated 11 [Homo sapiens]               29   2.4  
gi|210147567 hypothetical protein LOC220081 [Homo sapiens]             29   3.2  
gi|23397672 homeobox D4 [Homo sapiens]                                 28   4.2  
gi|83367077 mucin 16 [Homo sapiens]                                    28   4.2  
gi|4826878 oxidative-stress responsive 1 [Homo sapiens]                28   4.2  
gi|239754289 PREDICTED: hypothetical protein [Homo sapiens]            28   4.2  
gi|239752697 PREDICTED: chromosome 1 open reading frame 167 [Hom...    28   4.2  
gi|239748826 PREDICTED: hypothetical protein XP_002346831 [Homo ...    28   4.2  
gi|239747231 PREDICTED: chromosome 1 open reading frame 167 [Hom...    28   4.2  
gi|239742857 PREDICTED: hypothetical protein XP_002342664 [Homo ...    28   4.2  

>gi|4504517 heat shock protein beta-1 [Homo sapiens]
          Length = 205

 Score =  424 bits (1091), Expect = e-119
 Identities = 205/205 (100%), Positives = 205/205 (100%)

Query: 1   MTERRVPFSLLRGPSWDPFRDWYPHSRLFDQAFGLPRLPEEWSQWLGGSSWPGYVRPLPP 60
           MTERRVPFSLLRGPSWDPFRDWYPHSRLFDQAFGLPRLPEEWSQWLGGSSWPGYVRPLPP
Sbjct: 1   MTERRVPFSLLRGPSWDPFRDWYPHSRLFDQAFGLPRLPEEWSQWLGGSSWPGYVRPLPP 60

Query: 61  AAIESPAVAAPAYSRALSRQLSSGVSEIRHTADRWRVSLDVNHFAPDELTVKTKDGVVEI 120
           AAIESPAVAAPAYSRALSRQLSSGVSEIRHTADRWRVSLDVNHFAPDELTVKTKDGVVEI
Sbjct: 61  AAIESPAVAAPAYSRALSRQLSSGVSEIRHTADRWRVSLDVNHFAPDELTVKTKDGVVEI 120

Query: 121 TGKHEERQDEHGYISRCFTRKYTLPPGVDPTQVSSSLSPEGTLTVEAPMPKLATQSNEIT 180
           TGKHEERQDEHGYISRCFTRKYTLPPGVDPTQVSSSLSPEGTLTVEAPMPKLATQSNEIT
Sbjct: 121 TGKHEERQDEHGYISRCFTRKYTLPPGVDPTQVSSSLSPEGTLTVEAPMPKLATQSNEIT 180

Query: 181 IPVTFESRAQLGGPEAAKSDETAAK 205
           IPVTFESRAQLGGPEAAKSDETAAK
Sbjct: 181 IPVTFESRAQLGGPEAAKSDETAAK 205


>gi|4503057 crystallin, alpha B [Homo sapiens]
          Length = 175

 Score =  124 bits (310), Expect = 7e-29
 Identities = 76/171 (44%), Positives = 101/171 (59%), Gaps = 17/171 (9%)

Query: 18  PFRDWYPHSRLFDQAFGLPRLPEEWSQWLGGSSWPGYVRPLPPAAIESPAVAAPAYSRAL 77
           PF  ++  SRLFDQ FG   L  +        S P Y+RP             P++ RA 
Sbjct: 13  PFFPFHSPSRLFDQFFGEHLLESDLFPTSTSLS-PFYLRP-------------PSFLRAP 58

Query: 78  SRQLSSGVSEIRHTADRWRVSLDVNHFAPDELTVKTKDGVVEITGKHEERQDEHGYISRC 137
           S    +G+SE+R   DR+ V+LDV HF+P+EL VK    V+E+ GKHEERQDEHG+ISR 
Sbjct: 59  S-WFDTGLSEMRLEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISRE 117

Query: 138 FTRKYTLPPGVDPTQVSSSLSPEGTLTVEAPMPKLATQSNEITIPVTFESR 188
           F RKY +P  VDP  ++SSLS +G LTV  P  +++    E TIP+T E +
Sbjct: 118 FHRKYRIPADVDPLTITSSLSSDGVLTVNGPRKQVS--GPERTIPITREEK 166


>gi|7657146 heat shock 22kDa protein 8 [Homo sapiens]
          Length = 196

 Score =  115 bits (287), Expect = 3e-26
 Identities = 72/180 (40%), Positives = 97/180 (53%), Gaps = 23/180 (12%)

Query: 1   MTERRVPFSLLRGPSW---DPFRDWYPHSRLFDQAFGLPRLPEE----WSQWLG---GSS 50
           M + ++PFS    PS    DPFRD    SRL D  FG+   P++    W  W      S+
Sbjct: 1   MADGQMPFSC-HYPSRLRRDPFRDSPLSSRLLDDGFGMDPFPDDLTASWPDWALPRLSSA 59

Query: 51  WPGYVRP--LPPAAIESPAVAAPAYSRALSRQLSSGVSEIRHTADRWRVSLDVNHFAPDE 108
           WPG +R   +P     +     PA  R          +      + W+V ++V+ F P+E
Sbjct: 60  WPGTLRSGMVPRGPTATARFGVPAEGR----------TPPPFPGEPWKVCVNVHSFKPEE 109

Query: 109 LTVKTKDGVVEITGKHEERQDEHGYISRCFTRKYTLPPGVDPTQVSSSLSPEGTLTVEAP 168
           L VKTKDG VE++GKHEE+Q E G +S+ FT+K  LP  VDP  V +SLSPEG L +EAP
Sbjct: 110 LMVKTKDGYVEVSGKHEEKQQEGGIVSKNFTKKIQLPAEVDPVTVFASLSPEGLLIIEAP 169


>gi|4503055 crystallin, alpha A [Homo sapiens]
          Length = 173

 Score =  108 bits (271), Expect = 2e-24
 Identities = 69/170 (40%), Positives = 94/170 (55%), Gaps = 23/170 (13%)

Query: 22  WYPHSRLFDQAFGLPRLPEEWSQWLGGSSWPGYVRPLPPAAIESPAVAAPAYSRALSRQ- 80
           +YP SRLFDQ FG      +   +L  +                    +P Y ++L R  
Sbjct: 17  FYP-SRLFDQFFGEGLFEYDLLPFLSST-------------------ISPYYRQSLFRTV 56

Query: 81  LSSGVSEIRHTADRWRVSLDVNHFAPDELTVKTKDGVVEITGKHEERQDEHGYISRCFTR 140
           L SG+SE+R   D++ + LDV HF+P++LTVK +D  VEI GKH ERQD+HGYISR F R
Sbjct: 57  LDSGISEVRSDRDKFVIFLDVKHFSPEDLTVKVQDDFVEIHGKHNERQDDHGYISREFHR 116

Query: 141 KYTLPPGVDPTQVSSSLSPEGTLTVEAPMPKLATQSN--EITIPVTFESR 188
           +Y LP  VD + +S SLS +G LT   P  +    +   E  IPV+ E +
Sbjct: 117 RYRLPSNVDQSALSCSLSADGMLTFCGPKIQTGLDATHAERAIPVSREEK 166


>gi|4504519 heat shock 27kDa protein 2 [Homo sapiens]
          Length = 182

 Score =  100 bits (249), Expect = 9e-22
 Identities = 71/182 (39%), Positives = 100/182 (54%), Gaps = 28/182 (15%)

Query: 26  SRLFDQAFGLPRLPEEWSQWLGGSSWPGY-VRPLPPAAIESPAVAAPAYSRALSRQLSSG 84
           SRL +Q FG   LPEE    L  + + GY VRP    A E         SRA       G
Sbjct: 22  SRLGEQRFGEGLLPEEI---LTPTLYHGYYVRPRAAPAGEG--------SRA-------G 63

Query: 85  VSEIRHTADRWRVSLDVNHFAPDELTVKTKDGVVEITGKHEERQDEHGYISRCFTRKYTL 144
            SE+R +  +++  LDV+HF PDE+TV+T D ++E++ +H +R D HG++SR F R Y L
Sbjct: 64  ASELRLSEGKFQAFLDVSHFTPDEVTVRTVDNLLEVSARHPQRLDRHGFVSREFCRTYVL 123

Query: 145 PPGVDPTQVSSSLSPEGTLTVEAPM--PKLATQSNEITIPVTFESRAQLGGPEAAKSDET 202
           P  VDP +V ++LS +G L +EAP     L T+ NE+ I +       L  P   + +E 
Sbjct: 124 PADVDPWRVRAALSHDGILNLEAPRGGRHLDTEVNEVYISL-------LPAPPDPEEEEE 176

Query: 203 AA 204
           AA
Sbjct: 177 AA 178


>gi|21389433 heat shock protein, alpha-crystallin-related, B6 [Homo
           sapiens]
          Length = 160

 Score = 99.8 bits (247), Expect = 1e-21
 Identities = 61/159 (38%), Positives = 84/159 (52%), Gaps = 26/159 (16%)

Query: 14  PSW-----DPFRDWYPHSRLFDQAFGLPRLPEEWSQWLGGSSWPGYVRPLPPAAIESPAV 68
           PSW      P        RLFDQ FG   L  E +     +  P Y+R        +P+V
Sbjct: 9   PSWLRRASAPLPGLSAPGRLFDQRFGEGLLEAELAALCPTTLAPYYLR--------APSV 60

Query: 69  AAPAYSRALSRQLSSGVSEIRHTADRWRVSLDVNHFAPDELTVKTKDGVVEITGKHEERQ 128
           A P             V+++      + V LDV HF+P+E+ VK     VE+  +HEER 
Sbjct: 61  ALP-------------VAQVPTDPGHFSVLLDVKHFSPEEIAVKVVGEHVEVHARHEERP 107

Query: 129 DEHGYISRCFTRKYTLPPGVDPTQVSSSLSPEGTLTVEA 167
           DEHG+++R F R+Y LPPGVDP  V+S+LSPEG L+++A
Sbjct: 108 DEHGFVAREFHRRYRLPPGVDPAAVTSALSPEGVLSIQA 146


>gi|5453688 heat shock 27kDa protein 3 [Homo sapiens]
          Length = 150

 Score = 68.6 bits (166), Expect = 4e-12
 Identities = 38/111 (34%), Positives = 59/111 (53%), Gaps = 2/111 (1%)

Query: 62  AIESPAVAAPAYSRALSRQLSSGVSEI--RHTADRWRVSLDVNHFAPDELTVKTKDGVVE 119
           A+  P +     +RA         +E   R     +++ LDV  F P+++ ++T +G + 
Sbjct: 36  ALPGPTIVDLRKTRAAQSPPVDSAAETPPREGKSHFQILLDVVQFLPEDIIIQTFEGWLL 95

Query: 120 ITGKHEERQDEHGYISRCFTRKYTLPPGVDPTQVSSSLSPEGTLTVEAPMP 170
           I  +H  R DEHG+ISR FTR+Y LP GV+   +S+ L  +G L VE   P
Sbjct: 96  IKAQHGTRMDEHGFISRSFTRQYKLPDGVEIKDLSAVLCHDGILVVEVKDP 146


>gi|7657202 cardiovascular heat shock protein [Homo sapiens]
          Length = 170

 Score = 54.3 bits (129), Expect = 7e-08
 Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 3/84 (3%)

Query: 84  GVSEIRHTADRWRVSLDVNHFAPDELTVKTKDGVVEITGKHEERQDEHGYISRCFTRKYT 143
           G   I+   D +  ++DV  F+P+++ V T +  +E+     E+    G +   F  K  
Sbjct: 71  GAGNIKTLGDAYEFAVDVRDFSPEDIIVTTSNNHIEVRA---EKLAADGTVMNTFAHKCQ 127

Query: 144 LPPGVDPTQVSSSLSPEGTLTVEA 167
           LP  VDPT V+S+L  +G+LT+ A
Sbjct: 128 LPEDVDPTSVTSALREDGSLTIRA 151


>gi|194248060 outer dense fiber of sperm tails 1 [Homo sapiens]
          Length = 250

 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 24/76 (31%), Positives = 44/76 (57%), Gaps = 7/76 (9%)

Query: 98  SLDVNHFAPDELTVKTKDGVVEITGKHEERQD-----EHGYISRCFTRKYTLPPGVDPTQ 152
           S++V  F PD++ V+ KDG V ++ + E R D     ++ Y++ C  ++++LPP VD   
Sbjct: 128 SVNVCGFEPDQVKVRVKDGKVCVSAERENRYDCLGSKKYSYMNIC--KEFSLPPCVDEKD 185

Query: 153 VSSSLSPEGTLTVEAP 168
           V+ S      + +E+P
Sbjct: 186 VTYSYGLGSCVKIESP 201


>gi|15082238 heat shock protein, alpha-crystallin-related, B9 [Homo
           sapiens]
          Length = 159

 Score = 40.4 bits (93), Expect = 0.001
 Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 3/87 (3%)

Query: 90  HTADRWRVSLDVNHFAPDELTVKTKDGVVEITGKHEERQDEHGYISRCFTRKY---TLPP 146
           H  D +++ LD + FAP+EL V+     + +TG+ +    +   +S   ++K     LP 
Sbjct: 49  HARDGFQMKLDAHGFAPEELVVQVDGQWLMVTGQQQLDVRDPERVSYRMSQKVHRKMLPS 108

Query: 147 GVDPTQVSSSLSPEGTLTVEAPMPKLA 173
            + PT ++  L+P G L V      LA
Sbjct: 109 NLSPTAMTCCLTPSGQLWVRGQCVALA 135


>gi|4504211 guanylate cyclase 1, soluble, alpha 2 [Homo sapiens]
          Length = 732

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 3/56 (5%)

Query: 45  WLGGSSWPGYVRPLPPAAIESPAVAAPAYSRALSRQLSSGVSEIRHTADRWRVSLD 100
           W G  S PG + P P AA    A AAPA + A S   ++  +  R    R RV+LD
Sbjct: 36  WNGSRSPPGPLEPSPAAAA---AAAAPAPTPAASAAAAAATAGARRVQRRRRVNLD 88


>gi|90819231 myeloid/lymphoid or mixed-lineage leukemia (trithorax
           homolog, Drosophila); translocated to, 4 isoform 3 [Homo
           sapiens]
          Length = 1612

 Score = 33.1 bits (74), Expect = 0.17
 Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 10/90 (11%)

Query: 106 PDELTVKTKDGVVEITGKHEERQDEHGYISRCFTRKYTLPPGVDPTQVSSSLSPEGTLTV 165
           PD +  KTK  +   T K +ER D  GY S       TLPP   P  V   LSP+G+ + 
Sbjct: 347 PDHIPKKTKKHLEGKTPKGKERADGSGYGS-------TLPPEKLPYLV--ELSPDGSDSR 397

Query: 166 EAP-MPKLATQSNEITIPVTFESRAQLGGP 194
           + P + +L     E+      ++  QL GP
Sbjct: 398 DKPKLYRLQLSVTEVGTEKLDDNSIQLFGP 427


>gi|242117953 SH3 domain-containing protein C1orf113 isoform 1 [Homo
           sapiens]
          Length = 756

 Score = 31.6 bits (70), Expect = 0.49
 Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 5/113 (4%)

Query: 95  WRVSLDVNHFAPDELTVKTKDGVVEITGKHEERQDEHGYISRCFTRKYTLPPG-VDPTQV 153
           +RV  D    APDEL ++  D VV++  K  E  D+  +   C  R+   P   V P   
Sbjct: 186 YRVLFDYQPEAPDELALRRGD-VVKVLSKTTE--DKGWWEGECQGRRGVFPDNFVLPPPP 242

Query: 154 SSSLSPEGTLTVE-APMPKLATQSNEITIPVTFESRAQLGGPEAAKSDETAAK 205
              L P   ++ E AP+ +      + ++P   +      GP  AK+  T ++
Sbjct: 243 IKKLVPRKVVSRESAPIKEPKKLMPKTSLPTVKKLATATTGPSKAKTSRTPSR 295


>gi|242117948 SH3 domain-containing protein C1orf113 isoform 2 [Homo
           sapiens]
          Length = 645

 Score = 31.6 bits (70), Expect = 0.49
 Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 5/113 (4%)

Query: 95  WRVSLDVNHFAPDELTVKTKDGVVEITGKHEERQDEHGYISRCFTRKYTLPPG-VDPTQV 153
           +RV  D    APDEL ++  D VV++  K  E  D+  +   C  R+   P   V P   
Sbjct: 75  YRVLFDYQPEAPDELALRRGD-VVKVLSKTTE--DKGWWEGECQGRRGVFPDNFVLPPPP 131

Query: 154 SSSLSPEGTLTVE-APMPKLATQSNEITIPVTFESRAQLGGPEAAKSDETAAK 205
              L P   ++ E AP+ +      + ++P   +      GP  AK+  T ++
Sbjct: 132 IKKLVPRKVVSRESAPIKEPKKLMPKTSLPTVKKLATATTGPSKAKTSRTPSR 184


>gi|22003858 ventricular zone expressed PH domain homolog 1 [Homo
           sapiens]
          Length = 833

 Score = 31.6 bits (70), Expect = 0.49
 Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 3/54 (5%)

Query: 91  TADRWRVSLDVNHFAPDELTVKTKDGVVEITGKHEERQDEHGYISRCFTRKYTL 144
           TA  W+  +  N   P++ TV  +DG   I GK +E+Q    +I R  TR +TL
Sbjct: 693 TAGAWQCFMCNN---PEKATVVNQDGQPLIEGKLKEKQVRWKFIKRWKTRYFTL 743


>gi|213385278 TNF receptor-associated factor 3 interacting protein 1
           isoform 2 [Homo sapiens]
          Length = 625

 Score = 30.8 bits (68), Expect = 0.84
 Identities = 24/97 (24%), Positives = 37/97 (38%), Gaps = 3/97 (3%)

Query: 36  PRLPEEWSQWLGGSSWPGYVRPLPPAAIESPAVAAPAYSRALSRQLSSGVSEIRHTADRW 95
           P +P E S  +     PG  RP PP      ++ A    R+ S +  S V    H +D  
Sbjct: 379 PEIPNELSSNIRRIPRPGSARPAPPRVKRQDSMEALQMDRSGSGKTVSNVITESHNSDNE 438

Query: 96  RVSLDVNHFAPDELTVKTKDGVVEITGKHEERQDEHG 132
                V   AP    +     +  +T    E +++HG
Sbjct: 439 EDDQFVVEAAPQ---LSEMSEIEMVTAVELEEEEKHG 472


>gi|20070262 TNF receptor-associated factor 3 interacting protein 1
           isoform 1 [Homo sapiens]
          Length = 691

 Score = 30.8 bits (68), Expect = 0.84
 Identities = 24/97 (24%), Positives = 37/97 (38%), Gaps = 3/97 (3%)

Query: 36  PRLPEEWSQWLGGSSWPGYVRPLPPAAIESPAVAAPAYSRALSRQLSSGVSEIRHTADRW 95
           P +P E S  +     PG  RP PP      ++ A    R+ S +  S V    H +D  
Sbjct: 445 PEIPNELSSNIRRIPRPGSARPAPPRVKRQDSMEALQMDRSGSGKTVSNVITESHNSDNE 504

Query: 96  RVSLDVNHFAPDELTVKTKDGVVEITGKHEERQDEHG 132
                V   AP    +     +  +T    E +++HG
Sbjct: 505 EDDQFVVEAAPQ---LSEMSEIEMVTAVELEEEEKHG 538


>gi|26787962 advanced glycosylation end product-specific receptor
          isoform 2 precursor [Homo sapiens]
          Length = 342

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)

Query: 34 GLPRLPEEWSQW-LGGSSWPGYVRPLPPAAIESPAV 68
          G P+ P +  +W LGG  W    R LP  ++  PAV
Sbjct: 40 GAPKKPPQRLEWKLGGGPWDSVARVLPNGSLFLPAV 75


>gi|145309302 cell division cycle 2-like 5 isoform 1 [Homo sapiens]
          Length = 1512

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 40/159 (25%), Positives = 63/159 (39%), Gaps = 18/159 (11%)

Query: 47  GGSSWPGYVRPLPPAAIESPAVAAPAYSRALSRQLSSGVSEIRHTADRWRVSLDVNHFAP 106
           GG S P Y R LP +        +P+YSR  S +    VS   +++  WR S   + ++P
Sbjct: 345 GGGSSP-YSRRLPRSPSPYSRRRSPSYSRHSSYERGGDVSPSPYSSSSWRRSR--SPYSP 401

Query: 107 DELTVKTKDGVVEITGKHEERQDEHGYISRCFTRKYTLPPGVDPTQVSSSLSPEGTLTVE 166
                     V+  +GK   R       SR  +R              SS+SP  TLT++
Sbjct: 402 ----------VLRRSGKSRSRSPYSSRHSRSRSRHRL----SRSRSRHSSISP-STLTLK 446

Query: 167 APMPKLATQSNEITIPVTFESRAQLGGPEAAKSDETAAK 205
           + +     ++ +        +       EA K+ E AAK
Sbjct: 447 SSLAAELNKNKKARAAEAARAAEAAKAAEATKAAEAAAK 485


>gi|145309300 cell division cycle 2-like 5 isoform 2 [Homo sapiens]
          Length = 1452

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 40/159 (25%), Positives = 63/159 (39%), Gaps = 18/159 (11%)

Query: 47  GGSSWPGYVRPLPPAAIESPAVAAPAYSRALSRQLSSGVSEIRHTADRWRVSLDVNHFAP 106
           GG S P Y R LP +        +P+YSR  S +    VS   +++  WR S   + ++P
Sbjct: 345 GGGSSP-YSRRLPRSPSPYSRRRSPSYSRHSSYERGGDVSPSPYSSSSWRRSR--SPYSP 401

Query: 107 DELTVKTKDGVVEITGKHEERQDEHGYISRCFTRKYTLPPGVDPTQVSSSLSPEGTLTVE 166
                     V+  +GK   R       SR  +R              SS+SP  TLT++
Sbjct: 402 ----------VLRRSGKSRSRSPYSSRHSRSRSRHRL----SRSRSRHSSISP-STLTLK 446

Query: 167 APMPKLATQSNEITIPVTFESRAQLGGPEAAKSDETAAK 205
           + +     ++ +        +       EA K+ E AAK
Sbjct: 447 SSLAAELNKNKKARAAEAARAAEAAKAAEATKAAEAAAK 485


>gi|14150066 spermatogenesis associated 11 [Homo sapiens]
          Length = 221

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 1/55 (1%)

Query: 45 WLGGSSWPGYVRPLPPAAIESPAVAAPAYSRALSRQLSSGVSEIRHTADRWRVSL 99
          W+ GS  P  +  L  AA+  P   + A    LSR+L   +   R+  D W  ++
Sbjct: 17 WVRGSG-PSVLSRLQDAAVVRPGFLSTAEEETLSRELEPELRRRRYEYDHWDAAI 70


>gi|210147567 hypothetical protein LOC220081 [Homo sapiens]
          Length = 696

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 15/63 (23%), Positives = 33/63 (52%)

Query: 127 RQDEHGYISRCFTRKYTLPPGVDPTQVSSSLSPEGTLTVEAPMPKLATQSNEITIPVTFE 186
           ++ +  Y S+    +    P   P+QV++ L+   T    +P+ + AT+S+E+ + +   
Sbjct: 212 KEPKASYSSQTMLLRDARSPDAGPSQVTTFLTVPLTFATPSPVSESATESSELLLTLYRR 271

Query: 187 SRA 189
           S+A
Sbjct: 272 SQA 274


>gi|23397672 homeobox D4 [Homo sapiens]
          Length = 255

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 23/91 (25%), Positives = 38/91 (41%), Gaps = 1/91 (1%)

Query: 52  PGYVRPLPPAAIESPAVAAPAYSRALSRQLSSGVS-EIRHTADRWRVSLDVNHFAPDELT 110
           PG   P PPA   +P   A AYS++  +Q  SG + +       W   + VN   P+   
Sbjct: 92  PGEPCPAPPAPPPAPLPGARAYSQSDPKQPPSGTALKQPAVVYPWMKKVHVNSVNPNYTG 151

Query: 111 VKTKDGVVEITGKHEERQDEHGYISRCFTRK 141
            + K      T +     ++  + +R  TR+
Sbjct: 152 GEPKRSRTAYTRQQVLELEKEFHFNRYLTRR 182


>gi|83367077 mucin 16 [Homo sapiens]
          Length = 14507

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 3/33 (9%)

Query: 142  YTLPPGVDPTQVSSSLSPEGTLT---VEAPMPK 171
            +T+PP ++ T  SSSL P   +T   V + +PK
Sbjct: 6790 WTIPPSIEKTSFSSSLMPSPAMTSPPVSSTLPK 6822


>gi|4826878 oxidative-stress responsive 1 [Homo sapiens]
          Length = 527

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 9/84 (10%)

Query: 112 KTKDGVVEITGKHEERQDEHGYISRCFTRKYTLPPGVDPTQVSSSLSPEGTL-------T 164
           KT+DG  E +    + + E G  +    R   +   +  +++  +  P GTL       +
Sbjct: 330 KTEDGGWEWSDDEFDEESEEGKAAISQLRSPRVKESISNSELFPTTDPVGTLLQVPEQIS 389

Query: 165 VEAPMP--KLATQSNEITIPVTFE 186
              P P  ++ATQ  ++++P T E
Sbjct: 390 AHLPQPAGQIATQPTQVSLPPTAE 413


>gi|239754289 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 178

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 23/60 (38%), Positives = 28/60 (46%), Gaps = 4/60 (6%)

Query: 27  RLFDQAFGLPRLPEEWSQWLGGSSWPGYVRPLPPAAIESPAVAAPAYSRALSRQLSSGVS 86
           RL  Q F LP  P      LG  SW  + R    A   +PA AA A +RAL   ++S  S
Sbjct: 49  RLGLQPFALPPPPR---LSLGPGSWAKFARSATAAQTAAPATAA-AMARALGPYVTSACS 104


>gi|239752697 PREDICTED: chromosome 1 open reading frame 167 [Homo
           sapiens]
          Length = 697

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 5/45 (11%)

Query: 42  WSQWLGGSSW----PGYVRPLPPAAIESPAV-AAPAYSRALSRQL 81
           W QW G SSW    P + R   P A  SP   A  A S+A  R+L
Sbjct: 513 WPQWPGQSSWVPGLPLWTRDQGPRAHSSPEPRACKAQSKAHKRRL 557


>gi|239748826 PREDICTED: hypothetical protein XP_002346831 [Homo
           sapiens]
          Length = 178

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 23/60 (38%), Positives = 28/60 (46%), Gaps = 4/60 (6%)

Query: 27  RLFDQAFGLPRLPEEWSQWLGGSSWPGYVRPLPPAAIESPAVAAPAYSRALSRQLSSGVS 86
           RL  Q F LP  P      LG  SW  + R    A   +PA AA A +RAL   ++S  S
Sbjct: 49  RLGLQPFALPPPPR---LSLGPGSWAKFARSATAAQTAAPATAA-AMARALGPYVTSACS 104


>gi|239747231 PREDICTED: chromosome 1 open reading frame 167 [Homo
           sapiens]
          Length = 697

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 5/45 (11%)

Query: 42  WSQWLGGSSW----PGYVRPLPPAAIESPAV-AAPAYSRALSRQL 81
           W QW G SSW    P + R   P A  SP   A  A S+A  R+L
Sbjct: 513 WPQWPGQSSWVPGLPLWTRDQGPRAHSSPEPRACKAQSKAHKRRL 557


>gi|239742857 PREDICTED: hypothetical protein XP_002342664 [Homo
           sapiens]
          Length = 178

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 23/60 (38%), Positives = 28/60 (46%), Gaps = 4/60 (6%)

Query: 27  RLFDQAFGLPRLPEEWSQWLGGSSWPGYVRPLPPAAIESPAVAAPAYSRALSRQLSSGVS 86
           RL  Q F LP  P      LG  SW  + R    A   +PA AA A +RAL   ++S  S
Sbjct: 49  RLGLQPFALPPPPR---LSLGPGSWAKFARSATAAQTAAPATAA-AMARALGPYVTSACS 104


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.314    0.131    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,025,775
Number of Sequences: 37866
Number of extensions: 432639
Number of successful extensions: 1305
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 1269
Number of HSP's gapped (non-prelim): 57
length of query: 205
length of database: 18,247,518
effective HSP length: 97
effective length of query: 108
effective length of database: 14,574,516
effective search space: 1574047728
effective search space used: 1574047728
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 59 (27.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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