Guide to the Human Genome
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Name: KLK13 Sequence: fasta or formatted (277aa) NCBI GI: 11496281
Description:

kallikrein 13 precursor

Referenced in:

Serine Proteases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.0         11           2
 C cysteine            3.6         10           1
 D aspartate           2.9          8           1
 E glutamate           4.7         13           2
 F phenylalanine       1.1          3           1
 G glycine            10.5         29           2
 H histidine           3.6         10           1
 I isoleucine          3.2          9           1
 K lysine              4.3         12           1
 L leucine            11.6         32           2
 M methionine          1.1          3           1
 N asparagine          3.2          9           2
 P proline             6.9         19           1
 Q glutamine           6.1         17           3
 R arginine            5.4         15           2
 S serine              6.5         18           2
 T threonine           7.6         21           3
 V valine              7.6         21           2
 W tryptophan          2.5          7           1
 Y tyrosine            3.6         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   kallikrein 13 precursor 
KLK11                 0.427   kallikrein 11 isoform 1 preproprotein 
KLK11                 0.427   kallikrein 11 isoform 2 precursor 
KLK11                 0.427   kallikrein 11 isoform 1 preproprotein 
KLK8                  0.388   kallikrein 8 isoform 2 
KLK8                  0.388   kallikrein 8 isoform 1 preproprotein 
KLK5                  0.384   kallikrein-related peptidase 5 preproprotein 
KLK5                  0.384   kallikrein-related peptidase 5 preproprotein 
KLK5                  0.384   kallikrein-related peptidase 5 preproprotein 
KLK6                  0.384   kallikrein-related peptidase 6 isoform A preproprote...
KLK6                  0.384   kallikrein-related peptidase 6 isoform A preproprotei...
KLK14                 0.381   kallikrein 14 preproprotein 
KLK2                  0.365   kallikrein 2, prostatic isoform 1 
KLK3                  0.358   prostate specific antigen isoform 1 preproprotein [Ho...
KLK15                 0.352   kallikrein-related peptidase 15 isoform 4 preproprot...
KLK9                  0.352   kallikrein-related peptidase 9 
KLK7                  0.345   stratum corneum chymotryptic enzyme preproprotein [H...
KLK7                  0.345   stratum corneum chymotryptic enzyme preproprotein [Ho...
KLK12                 0.343   kallikrein 12 isoform 2 
KLK1                  0.327   kallikrein 1 preproprotein 
KLK12                 0.322   kallikrein 12 isoform 1 
PRSS1                 0.319   protease, serine, 1 preproprotein 
PRSS3                 0.311   mesotrypsin isoform 1 preproprotein 
PRSS3                 0.311   mesotrypsin isoform 2 preproprotein 
KLK4                  0.304   kallikrein-related peptidase 4 preproprotein 
KLK10                 0.304   kallikrein-related peptidase 10 preproprotein [Homo...
KLK10                 0.304   kallikrein-related peptidase 10 preproprotein 
KLK10                 0.304   kallikrein-related peptidase 10 preproprotein 
PRSS2                 0.302   protease, serine, 2 preproprotein 
KLK3                  0.297   prostate specific antigen isoform 4 preproprotein [H...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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