Guide to the Human Genome
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Name: MASP1 Sequence: fasta or formatted (728aa) NCBI GI: 21264359
Description:

mannan-binding lectin serine protease 1 isoform 2 precursor

Referenced in:

Complement

Other entries for this name:
alt prot [699aa] mannan-binding lectin serine protease 1 isoform 1 precursor
alt prot [380aa] mannan-binding lectin serine protease 1 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.7         27           2
 C cysteine            3.7         27           1
 D aspartate           5.5         40           2
 E glutamate           7.3         53           2
 F phenylalanine       4.0         29           2
 G glycine             7.3         53           2
 H histidine           2.6         19           1
 I isoleucine          4.4         32           2
 K lysine              4.1         30           1
 L leucine             7.8         57           3
 M methionine          1.8         13           1
 N asparagine          4.4         32           3
 P proline             6.5         47           2
 Q glutamine           3.7         27           1
 R arginine            4.1         30           2
 S serine              8.2         60           2
 T threonine           5.6         41           2
 V valine              8.5         62           2
 W tryptophan          1.8         13           1
 Y tyrosine            4.9         36           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mannan-binding lectin serine protease 1 isoform 2 pr... 
MASP1                 0.694   mannan-binding lectin serine protease 1 isoform 1 pr...
MASP1                 0.499   mannan-binding lectin serine protease 1 isoform 3 [H...
MASP2                 0.390   mannan-binding lectin serine protease 2 isoform 1 pr...
C1R                   0.338   complement component 1, r subcomponent 
C1S                   0.300   complement component 1, s subcomponent precursor [Hom...
C1S                   0.300   complement component 1, s subcomponent precursor [Ho...
MASP2                 0.121   mannan-binding lectin serine protease 2 isoform 2 pr...
C1RL                  0.104   complement component 1, r subcomponent-like precursor...
BMP1                  0.098   bone morphogenetic protein 1 isoform 3 precursor [Hom...
TLL2                  0.096   tolloid-like 2 
TLL1                  0.094   tolloid-like 1 
F9                    0.089   coagulation factor IX preproprotein 
HP                    0.089   haptoglobin isoform 1 preproprotein 
ST14                  0.086   matriptase 
BMP1                  0.085   bone morphogenetic protein 1 isoform 1 precursor [Hom...
HP                    0.083   haptoglobin isoform 2 preproprotein 
BMP1                  0.081   bone morphogenetic protein 1 isoform 2 precursor [Hom...
KLKB1                 0.080   plasma kallikrein B1 precursor 
UNQ9391               0.077   hypothetical protein LOC203074 
HPR                   0.076   haptoglobin-related protein 
F7                    0.075   coagulation factor VII isoform b precursor 
F7                    0.075   coagulation factor VII isoform a precursor 
TMPRSS6               0.074   transmembrane protease, serine 6 
PROC                  0.073   protein C 
TMPRSS9               0.073   transmembrane protease, serine 9 
PRSS2                 0.073   protease, serine, 2 preproprotein 
PRSS8                 0.072   prostasin preproprotein 
HPN                   0.070   hepsin 
HPN                   0.070   hepsin 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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