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Search of human proteins with 4503381
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4503381 down-regulator of transcription 1 [Homo sapiens]
(176 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4503381 down-regulator of transcription 1 [Homo sapiens] 339 6e-94
gi|5453780 nuclear transcription factor Y, beta [Homo sapiens] 73 1e-13
gi|224586804 DNA-directed DNA polymerase epsilon 3 [Homo sapiens] 60 1e-09
gi|19718731 bromodomain-containing protein 4 isoform long [Homo ... 39 0.002
gi|197333737 guanylate-binding protein 5 [Homo sapiens] 39 0.002
gi|16418425 guanylate-binding protein 5 [Homo sapiens] 39 0.002
gi|153791497 ciliary rootlet coiled-coil [Homo sapiens] 39 0.002
gi|116875842 tRNA-intron endonuclease 34 [Homo sapiens] 38 0.005
gi|116875840 tRNA-intron endonuclease 34 [Homo sapiens] 38 0.005
gi|206725450 TAF12 RNA polymerase II, TATA box binding protein (... 37 0.009
gi|5032153 TAF12 RNA polymerase II, TATA box binding protein (TB... 37 0.009
gi|145312241 differentially expressed in FDCP 6 homolog [Homo sa... 37 0.009
gi|4507379 TATA box binding protein [Homo sapiens] 37 0.012
gi|17017963 forkhead box P2 isoform I [Homo sapiens] 36 0.015
gi|22538413 forkhead box P2 isoform III [Homo sapiens] 36 0.015
gi|149999352 forkhead box P2 isoform II [Homo sapiens] 36 0.015
gi|110347429 mediator complex subunit 12 [Homo sapiens] 36 0.015
gi|24497618 ATPase family, AAA domain containing 2 [Homo sapiens] 36 0.020
gi|41281453 serine/threonine kinase 2 [Homo sapiens] 36 0.020
gi|55956910 meningioma 1 [Homo sapiens] 35 0.026
gi|221139761 zinc finger protein 853 [Homo sapiens] 35 0.034
gi|239757877 PREDICTED: FERM and PDZ domain containing 3 [Homo s... 35 0.034
gi|89060961 PREDICTED: FERM and PDZ domain containing 3 [Homo sa... 35 0.034
gi|89059963 PREDICTED: FERM and PDZ domain containing 3 [Homo sa... 35 0.034
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 35 0.034
gi|112799849 tumor protein p53 binding protein, 2 isoform 1 [Hom... 35 0.044
gi|4885643 tumor protein p53 binding protein, 2 isoform 2 [Homo ... 35 0.044
gi|194272186 enhancer of polycomb homolog 2 [Homo sapiens] 35 0.044
gi|29789058 WW and C2 domain containing 1 isoform 3 [Homo sapiens] 34 0.057
gi|242247257 WW and C2 domain containing 1 isoform 2 [Homo sapiens] 34 0.057
>gi|4503381 down-regulator of transcription 1 [Homo sapiens]
Length = 176
Score = 339 bits (870), Expect = 6e-94
Identities = 176/176 (100%), Positives = 176/176 (100%)
Query: 1 MASSSGNDDDLTIPRAAINKMIKETLPNVRVANDARELVVNCCTEFIHLISSEANEICNK 60
MASSSGNDDDLTIPRAAINKMIKETLPNVRVANDARELVVNCCTEFIHLISSEANEICNK
Sbjct: 1 MASSSGNDDDLTIPRAAINKMIKETLPNVRVANDARELVVNCCTEFIHLISSEANEICNK 60
Query: 61 SEKKTISPEHVIQALESLGFGSYISEVKEVLQECKTVALKRRKASSRLENLGIPEEELLR 120
SEKKTISPEHVIQALESLGFGSYISEVKEVLQECKTVALKRRKASSRLENLGIPEEELLR
Sbjct: 61 SEKKTISPEHVIQALESLGFGSYISEVKEVLQECKTVALKRRKASSRLENLGIPEEELLR 120
Query: 121 QQQELFAKARQQQAELAQQEWLQMQQAAQQAQLAAASASASNQAGSSQDEEDDDDI 176
QQQELFAKARQQQAELAQQEWLQMQQAAQQAQLAAASASASNQAGSSQDEEDDDDI
Sbjct: 121 QQQELFAKARQQQAELAQQEWLQMQQAAQQAQLAAASASASNQAGSSQDEEDDDDI 176
>gi|5453780 nuclear transcription factor Y, beta [Homo sapiens]
Length = 207
Score = 72.8 bits (177), Expect = 1e-13
Identities = 37/103 (35%), Positives = 66/103 (64%), Gaps = 2/103 (1%)
Query: 2 ASSSGNDDDLTIPRAAINKMIKETLPNV-RVANDARELVVNCCTEFIHLISSEANEICNK 60
+ S + D+ +P A + +++K +P ++A DA+E V C +EFI I+SEA+E C++
Sbjct: 48 SKESFREQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQ 107
Query: 61 SEKKTISPEHVIQALESLGFGSYISEVKEVLQECKTVALKRRK 103
++KTI+ E ++ A+ +LGF SY+ +K LQ+ + A+K K
Sbjct: 108 EKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFRE-AMKGEK 149
>gi|224586804 DNA-directed DNA polymerase epsilon 3 [Homo sapiens]
Length = 147
Score = 60.1 bits (144), Expect = 1e-09
Identities = 29/100 (29%), Positives = 58/100 (58%), Gaps = 1/100 (1%)
Query: 9 DDLTIPRAAINKMIKETLPN-VRVANDARELVVNCCTEFIHLISSEANEICNKSEKKTIS 67
+DL +P A I ++IKE LP+ V ++ +AR + + F+ +S AN K ++KT++
Sbjct: 6 EDLNLPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGKRKTLN 65
Query: 68 PEHVIQALESLGFGSYISEVKEVLQECKTVALKRRKASSR 107
V+ A+E + F +++ +KE L+ + +++AS +
Sbjct: 66 ASDVLSAMEEMEFQRFVTPLKEALEAYRREQKGKKEASEQ 105
>gi|19718731 bromodomain-containing protein 4 isoform long [Homo
sapiens]
Length = 1362
Score = 39.3 bits (90), Expect = 0.002
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Query: 86 EVKEVLQECKTVALKRRKASSRLENLGIPEEE-LLRQQQELFAKARQQQAELAQQEWLQM 144
E +E + + ++ K R E + E+E L Q + +AR++Q + QQ+ Q
Sbjct: 1235 EEREKALKAQAEHAEKEKERLRQERMRSREDEDALEQARRAHEEARRRQEQ--QQQQRQE 1292
Query: 145 QQAAQQAQLAAASASASNQAGSSQDE 170
QQ QQ Q AA +A+A+ QA SSQ +
Sbjct: 1293 QQQQQQQQAAAVAAAATPQAQSSQPQ 1318
>gi|197333737 guanylate-binding protein 5 [Homo sapiens]
Length = 586
Score = 39.3 bits (90), Expect = 0.002
Identities = 26/109 (23%), Positives = 53/109 (48%), Gaps = 6/109 (5%)
Query: 53 EANEICNKSEKKTISPEHVIQALESLGFGSYISEVKEVLQECKTVALKRRKASSRLENLG 112
+A E+ K K S H I + ++E ++ +E + A + + RL +
Sbjct: 454 QAEEVLQKYLKSKESVSHAILQTDQA-----LTETEKKKKEAQVKAEAEKAEAQRLAAIQ 508
Query: 113 IPEEELLRQQQELFAKARQQQAELAQQEWLQMQQAAQQAQLAAASASAS 161
E+++++++ L + + +Q E+A+Q WL QQ Q+ Q+ +A S
Sbjct: 509 RQNEQMMQERERLHQE-QVRQMEIAKQNWLAEQQKMQEQQMQEQAAQLS 556
>gi|16418425 guanylate-binding protein 5 [Homo sapiens]
Length = 586
Score = 39.3 bits (90), Expect = 0.002
Identities = 26/109 (23%), Positives = 53/109 (48%), Gaps = 6/109 (5%)
Query: 53 EANEICNKSEKKTISPEHVIQALESLGFGSYISEVKEVLQECKTVALKRRKASSRLENLG 112
+A E+ K K S H I + ++E ++ +E + A + + RL +
Sbjct: 454 QAEEVLQKYLKSKESVSHAILQTDQA-----LTETEKKKKEAQVKAEAEKAEAQRLAAIQ 508
Query: 113 IPEEELLRQQQELFAKARQQQAELAQQEWLQMQQAAQQAQLAAASASAS 161
E+++++++ L + + +Q E+A+Q WL QQ Q+ Q+ +A S
Sbjct: 509 RQNEQMMQERERLHQE-QVRQMEIAKQNWLAEQQKMQEQQMQEQAAQLS 556
>gi|153791497 ciliary rootlet coiled-coil [Homo sapiens]
Length = 2017
Score = 39.3 bits (90), Expect = 0.002
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Query: 88 KEVLQECKTVALKRRKASSRLENLGIPEEELLRQQQELFAKARQQQAELAQ-QEWLQMQQ 146
KE++ + K V +R +S E EE+L R Q+E A R+ +AE AQ Q LQ +Q
Sbjct: 966 KELMAQ-KLVQAEREAQASLREQRAAHEEDLQRLQREKEAAWRELEAERAQLQSQLQREQ 1024
Query: 147 AAQQAQLAAASASASNQAGSSQDEEDD 173
A+L A S + + Q E D+
Sbjct: 1025 EELLARLEAEKEELSEEIAALQQERDE 1051
>gi|116875842 tRNA-intron endonuclease 34 [Homo sapiens]
Length = 310
Score = 37.7 bits (86), Expect = 0.005
Identities = 23/73 (31%), Positives = 41/73 (56%)
Query: 102 RKASSRLENLGIPEEELLRQQQELFAKARQQQAELAQQEWLQMQQAAQQAQLAAASASAS 161
R S L + +EE ++Q L A+AR+ + + ++ + Q A +Q A+ AS+S
Sbjct: 77 RHHSLALTSFKRQQEESFQEQSALAAEARETRRQELLEKITEGQAAKKQKLEQASGASSS 136
Query: 162 NQAGSSQDEEDDD 174
+AGSSQ ++D+
Sbjct: 137 QEAGSSQAAKEDE 149
>gi|116875840 tRNA-intron endonuclease 34 [Homo sapiens]
Length = 310
Score = 37.7 bits (86), Expect = 0.005
Identities = 23/73 (31%), Positives = 41/73 (56%)
Query: 102 RKASSRLENLGIPEEELLRQQQELFAKARQQQAELAQQEWLQMQQAAQQAQLAAASASAS 161
R S L + +EE ++Q L A+AR+ + + ++ + Q A +Q A+ AS+S
Sbjct: 77 RHHSLALTSFKRQQEESFQEQSALAAEARETRRQELLEKITEGQAAKKQKLEQASGASSS 136
Query: 162 NQAGSSQDEEDDD 174
+AGSSQ ++D+
Sbjct: 137 QEAGSSQAAKEDE 149
>gi|206725450 TAF12 RNA polymerase II, TATA box binding protein
(TBP)-associated factor, 20 kD [Homo sapiens]
Length = 161
Score = 37.0 bits (84), Expect = 0.009
Identities = 24/106 (22%), Positives = 50/106 (47%), Gaps = 8/106 (7%)
Query: 8 DDDLTIPRAAINKMIKETLPNVRVANDARELVVNCCTEFIHLISSEANEICNKSEKKTIS 67
+++ + + + +++E PN ++ D E+++ +FI + + A ++ + T+
Sbjct: 53 ENNQVLTKKKLQDLVREVDPNEQLDEDVEEMLLQIADDFIESVVTAACQLARHRKSSTLE 112
Query: 68 PEHVIQALESL------GFGSYISEVKEVLQECKTVALKRRKASSR 107
+ V LE GFGS E++ + C T A K+R A R
Sbjct: 113 VKDVQLHLERQWNMWIPGFGS--EEIRPYKKACTTEAHKQRMALIR 156
>gi|5032153 TAF12 RNA polymerase II, TATA box binding protein
(TBP)-associated factor, 20 kD [Homo sapiens]
Length = 161
Score = 37.0 bits (84), Expect = 0.009
Identities = 24/106 (22%), Positives = 50/106 (47%), Gaps = 8/106 (7%)
Query: 8 DDDLTIPRAAINKMIKETLPNVRVANDARELVVNCCTEFIHLISSEANEICNKSEKKTIS 67
+++ + + + +++E PN ++ D E+++ +FI + + A ++ + T+
Sbjct: 53 ENNQVLTKKKLQDLVREVDPNEQLDEDVEEMLLQIADDFIESVVTAACQLARHRKSSTLE 112
Query: 68 PEHVIQALESL------GFGSYISEVKEVLQECKTVALKRRKASSR 107
+ V LE GFGS E++ + C T A K+R A R
Sbjct: 113 VKDVQLHLERQWNMWIPGFGS--EEIRPYKKACTTEAHKQRMALIR 156
>gi|145312241 differentially expressed in FDCP 6 homolog [Homo
sapiens]
Length = 631
Score = 37.0 bits (84), Expect = 0.009
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 10/79 (12%)
Query: 84 ISEVKEVLQECKTVALKRRK--ASSRLENLGIPEEE--------LLRQQQELFAKARQQQ 133
+ E+++ LQE + +K R+ S R+ + EEE L+++QE + + QQ+
Sbjct: 431 LEEMQQRLQEALQLEVKARRDEESVRIAQTRLLEEEEEKLKQLMQLKEEQERYIERAQQE 490
Query: 134 AELAQQEWLQMQQAAQQAQ 152
E QQE Q ++ QQAQ
Sbjct: 491 KEELQQEMAQQSRSLQQAQ 509
Score = 31.2 bits (69), Expect = 0.49
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 10/108 (9%)
Query: 75 LESLGFGSYISEVKEVLQECKTVALKRRKASS----RLENLG------IPEEELLRQQQE 124
L++ G S ++K+ +E + +RR A RL+ L + E ELL++ Q
Sbjct: 313 LQAEGKTSLHKDLKQKRREQREQRERRRAAKEEELLRLQQLQEEKERKLQELELLQEAQR 372
Query: 125 LFAKARQQQAELAQQEWLQMQQAAQQAQLAAASASASNQAGSSQDEED 172
+ Q++ E + + ++QQA + A A AS QA EE+
Sbjct: 373 QAERLLQEEEERRRSQHRELQQALEGQLREAEQARASMQAEMELKEEE 420
>gi|4507379 TATA box binding protein [Homo sapiens]
Length = 339
Score = 36.6 bits (83), Expect = 0.012
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 110 NLGIPEEELLRQQQELFAKARQQQAE---LAQQEWLQMQQAAQQAQLAAASASASNQAGS 166
+L I EE+ +QQQ+ + +QQQ + QQ+ Q QQ QQ Q A +A+A Q+ S
Sbjct: 48 SLSILEEQQRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQAVAAAAVQQSTS 107
Query: 167 SQ 168
Q
Sbjct: 108 QQ 109
Score = 35.8 bits (81), Expect = 0.020
Identities = 21/70 (30%), Positives = 37/70 (52%)
Query: 99 LKRRKASSRLENLGIPEEELLRQQQELFAKARQQQAELAQQEWLQMQQAAQQAQLAAASA 158
++ + S LE +++ +QQQ+ + +QQQ + QQ+ Q QQ QQ +AAA+
Sbjct: 43 IQNTNSLSILEEQQRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQAVAAAAV 102
Query: 159 SASNQAGSSQ 168
S ++Q
Sbjct: 103 QQSTSQQATQ 112
Score = 31.6 bits (70), Expect = 0.37
Identities = 16/54 (29%), Positives = 30/54 (55%)
Query: 115 EEELLRQQQELFAKARQQQAELAQQEWLQMQQAAQQAQLAAASASASNQAGSSQ 168
+++ +QQQ+ + +QQQ + QQ+ Q QQA A + +++ + Q S Q
Sbjct: 64 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQAVAAAAVQQSTSQQATQGTSGQ 117
Score = 27.3 bits (59), Expect = 7.0
Identities = 15/50 (30%), Positives = 26/50 (52%)
Query: 115 EEELLRQQQELFAKARQQQAELAQQEWLQMQQAAQQAQLAAASASASNQA 164
+++ +QQQ+ + +QQQ + QQ+ A QQ+ A+ S QA
Sbjct: 69 QQQQQQQQQQQQQQQQQQQQQQQQQQQAVAAAAVQQSTSQQATQGTSGQA 118
>gi|17017963 forkhead box P2 isoform I [Homo sapiens]
Length = 715
Score = 36.2 bits (82), Expect = 0.015
Identities = 27/114 (23%), Positives = 54/114 (47%), Gaps = 8/114 (7%)
Query: 64 KTISPEHVIQALESLGFGSYISEVKEVLQECKTVALKRR------KASSRLENLGIPEEE 117
+ I+P+ + Q L+ +++ +LQ+ + V L+++ K +L + +++
Sbjct: 97 QVITPQQMQQILQQQVLSP--QQLQALLQQQQAVMLQQQQLQEFYKKQQEQLHLQLLQQQ 154
Query: 118 LLRQQQELFAKARQQQAELAQQEWLQMQQAAQQAQLAAASASASNQAGSSQDEE 171
+QQQ+ + +QQQ + QQ+ Q QQ QQ Q A Q Q ++
Sbjct: 155 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHPGKQAKEQQQQQQQQQ 208
Score = 29.3 bits (64), Expect = 1.8
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 115 EEELLRQQQELFAKARQQQAELAQQEWLQMQQAAQQAQLAA 155
+++ +QQQ+ + +QQQ +Q Q QQ QQ QLAA
Sbjct: 172 QQQQQQQQQQQQQQQQQQQQHPGKQAKEQQQQQQQQQQLAA 212
Score = 27.3 bits (59), Expect = 7.0
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 115 EEELLRQQQELFAKARQQQAELAQQEWLQMQQAAQQAQL 153
+++ +QQQ +A++QQ + QQ+ L QQ Q QL
Sbjct: 183 QQQQQQQQQHPGKQAKEQQQQQQQQQQLAAQQLVFQQQL 221
Score = 27.3 bits (59), Expect = 7.0
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 11/46 (23%)
Query: 114 PEEELLRQQQELFAKARQQQAELA------QQEWLQMQQAAQQAQL 153
P ++ QQQ+ +QQQ +LA QQ+ LQMQQ QQ L
Sbjct: 193 PGKQAKEQQQQ-----QQQQQQLAAQQLVFQQQLLQMQQLQQQQHL 233
Score = 26.9 bits (58), Expect = 9.2
Identities = 14/54 (25%), Positives = 26/54 (48%)
Query: 115 EEELLRQQQELFAKARQQQAELAQQEWLQMQQAAQQAQLAAASASASNQAGSSQ 168
+++ +QQQ+ + +QQQ + QQ+ Q Q +QA+ Q + Q
Sbjct: 161 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHPGKQAKEQQQQQQQQQQLAAQQ 214
>gi|22538413 forkhead box P2 isoform III [Homo sapiens]
Length = 623
Score = 36.2 bits (82), Expect = 0.015
Identities = 27/114 (23%), Positives = 54/114 (47%), Gaps = 8/114 (7%)
Query: 64 KTISPEHVIQALESLGFGSYISEVKEVLQECKTVALKRR------KASSRLENLGIPEEE 117
+ I+P+ + Q L+ +++ +LQ+ + V L+++ K +L + +++
Sbjct: 5 QVITPQQMQQILQQQVLSP--QQLQALLQQQQAVMLQQQQLQEFYKKQQEQLHLQLLQQQ 62
Query: 118 LLRQQQELFAKARQQQAELAQQEWLQMQQAAQQAQLAAASASASNQAGSSQDEE 171
+QQQ+ + +QQQ + QQ+ Q QQ QQ Q A Q Q ++
Sbjct: 63 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHPGKQAKEQQQQQQQQQ 116
Score = 29.3 bits (64), Expect = 1.8
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 115 EEELLRQQQELFAKARQQQAELAQQEWLQMQQAAQQAQLAA 155
+++ +QQQ+ + +QQQ +Q Q QQ QQ QLAA
Sbjct: 80 QQQQQQQQQQQQQQQQQQQQHPGKQAKEQQQQQQQQQQLAA 120
Score = 27.3 bits (59), Expect = 7.0
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 115 EEELLRQQQELFAKARQQQAELAQQEWLQMQQAAQQAQL 153
+++ +QQQ +A++QQ + QQ+ L QQ Q QL
Sbjct: 91 QQQQQQQQQHPGKQAKEQQQQQQQQQQLAAQQLVFQQQL 129
Score = 27.3 bits (59), Expect = 7.0
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 11/46 (23%)
Query: 114 PEEELLRQQQELFAKARQQQAELA------QQEWLQMQQAAQQAQL 153
P ++ QQQ+ +QQQ +LA QQ+ LQMQQ QQ L
Sbjct: 101 PGKQAKEQQQQ-----QQQQQQLAAQQLVFQQQLLQMQQLQQQQHL 141
Score = 26.9 bits (58), Expect = 9.2
Identities = 14/54 (25%), Positives = 26/54 (48%)
Query: 115 EEELLRQQQELFAKARQQQAELAQQEWLQMQQAAQQAQLAAASASASNQAGSSQ 168
+++ +QQQ+ + +QQQ + QQ+ Q Q +QA+ Q + Q
Sbjct: 69 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHPGKQAKEQQQQQQQQQQLAAQQ 122
>gi|149999352 forkhead box P2 isoform II [Homo sapiens]
Length = 740
Score = 36.2 bits (82), Expect = 0.015
Identities = 27/114 (23%), Positives = 54/114 (47%), Gaps = 8/114 (7%)
Query: 64 KTISPEHVIQALESLGFGSYISEVKEVLQECKTVALKRR------KASSRLENLGIPEEE 117
+ I+P+ + Q L+ +++ +LQ+ + V L+++ K +L + +++
Sbjct: 122 QVITPQQMQQILQQQVLSP--QQLQALLQQQQAVMLQQQQLQEFYKKQQEQLHLQLLQQQ 179
Query: 118 LLRQQQELFAKARQQQAELAQQEWLQMQQAAQQAQLAAASASASNQAGSSQDEE 171
+QQQ+ + +QQQ + QQ+ Q QQ QQ Q A Q Q ++
Sbjct: 180 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHPGKQAKEQQQQQQQQQ 233
Score = 29.3 bits (64), Expect = 1.8
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 115 EEELLRQQQELFAKARQQQAELAQQEWLQMQQAAQQAQLAA 155
+++ +QQQ+ + +QQQ +Q Q QQ QQ QLAA
Sbjct: 197 QQQQQQQQQQQQQQQQQQQQHPGKQAKEQQQQQQQQQQLAA 237
Score = 27.3 bits (59), Expect = 7.0
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 115 EEELLRQQQELFAKARQQQAELAQQEWLQMQQAAQQAQL 153
+++ +QQQ +A++QQ + QQ+ L QQ Q QL
Sbjct: 208 QQQQQQQQQHPGKQAKEQQQQQQQQQQLAAQQLVFQQQL 246
Score = 27.3 bits (59), Expect = 7.0
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 11/46 (23%)
Query: 114 PEEELLRQQQELFAKARQQQAELA------QQEWLQMQQAAQQAQL 153
P ++ QQQ+ +QQQ +LA QQ+ LQMQQ QQ L
Sbjct: 218 PGKQAKEQQQQ-----QQQQQQLAAQQLVFQQQLLQMQQLQQQQHL 258
Score = 26.9 bits (58), Expect = 9.2
Identities = 14/54 (25%), Positives = 26/54 (48%)
Query: 115 EEELLRQQQELFAKARQQQAELAQQEWLQMQQAAQQAQLAAASASASNQAGSSQ 168
+++ +QQQ+ + +QQQ + QQ+ Q Q +QA+ Q + Q
Sbjct: 186 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHPGKQAKEQQQQQQQQQQLAAQQ 239
>gi|110347429 mediator complex subunit 12 [Homo sapiens]
Length = 2177
Score = 36.2 bits (82), Expect = 0.015
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 115 EEELLRQQQELFAKARQQQAELAQQEWLQMQQAAQQAQLAAASASASNQA 164
++++LRQQQ+ + +QQQ + QQ+ Q QQ QQ Q AA Q+
Sbjct: 2084 QQQILRQQQQQQQQQQQQQQQQQQQQQQQQQQHQQQQQQQAAPPQPQPQS 2133
Score = 32.0 bits (71), Expect = 0.28
Identities = 17/57 (29%), Positives = 27/57 (47%)
Query: 115 EEELLRQQQELFAKARQQQAELAQQEWLQMQQAAQQAQLAAASASASNQAGSSQDEE 171
+++ +QQQ+ + +QQQ L QQ+ Q QQ QQ Q Q Q ++
Sbjct: 2067 QQQQQQQQQQYHIRQQQQQQILRQQQQQQQQQQQQQQQQQQQQQQQQQQHQQQQQQQ 2123
Score = 31.6 bits (70), Expect = 0.37
Identities = 16/59 (27%), Positives = 29/59 (49%)
Query: 113 IPEEELLRQQQELFAKARQQQAELAQQEWLQMQQAAQQAQLAAASASASNQAGSSQDEE 171
+PE++ +QQQ+ + +QQQ + QQ+ ++Q QQ L Q Q ++
Sbjct: 2048 LPEQQQQQQQQQQQQQQQQQQQQQQQQQQYHIRQQQQQQILRQQQQQQQQQQQQQQQQQ 2106
Score = 31.2 bits (69), Expect = 0.49
Identities = 18/52 (34%), Positives = 24/52 (46%)
Query: 119 LRQQQELFAKARQQQAELAQQEWLQMQQAAQQAQLAAASASASNQAGSSQDE 170
+RQQQ+ +QQQ + QQ+ Q QQ QQ Q QA Q +
Sbjct: 2079 IRQQQQQQILRQQQQQQQQQQQQQQQQQQQQQQQQQQHQQQQQQQAAPPQPQ 2130
Score = 30.8 bits (68), Expect = 0.63
Identities = 15/57 (26%), Positives = 28/57 (49%)
Query: 115 EEELLRQQQELFAKARQQQAELAQQEWLQMQQAAQQAQLAAASASASNQAGSSQDEE 171
+++ +QQQ+ + +QQQ ++ +Q+ Q QQ QQ Q Q Q ++
Sbjct: 2066 QQQQQQQQQQQYHIRQQQQQQILRQQQQQQQQQQQQQQQQQQQQQQQQQQHQQQQQQ 2122
Score = 27.3 bits (59), Expect = 7.0
Identities = 16/57 (28%), Positives = 27/57 (47%)
Query: 115 EEELLRQQQELFAKARQQQAELAQQEWLQMQQAAQQAQLAAASASASNQAGSSQDEE 171
+++ +QQQ+ + +QQQ + QQ Q QQ A Q S + G Q ++
Sbjct: 2091 QQQQQQQQQQQQQQQQQQQQQQQQQHQQQQQQQAAPPQPQPQSQPQFQRQGLQQTQQ 2147
Score = 26.9 bits (58), Expect = 9.2
Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 5/65 (7%)
Query: 112 GIPEEELLRQQQELFAKARQQQAELAQQEWLQMQQ-----AAQQAQLAAASASASNQAGS 166
G+ +L +QQ+ + +QQQ + QQ+ Q QQ QQ Q+ Q
Sbjct: 2041 GVRSTAILPEQQQQQQQQQQQQQQQQQQQQQQQQQQYHIRQQQQQQILRQQQQQQQQQQQ 2100
Query: 167 SQDEE 171
Q ++
Sbjct: 2101 QQQQQ 2105
Score = 26.9 bits (58), Expect = 9.2
Identities = 14/57 (24%), Positives = 27/57 (47%)
Query: 115 EEELLRQQQELFAKARQQQAELAQQEWLQMQQAAQQAQLAAASASASNQAGSSQDEE 171
+++ +QQQ+ + +QQQ + QQ+ Q+ + QQ Q Q Q ++
Sbjct: 2058 QQQQQQQQQQQQQQQQQQQYHIRQQQQQQILRQQQQQQQQQQQQQQQQQQQQQQQQQ 2114
>gi|24497618 ATPase family, AAA domain containing 2 [Homo sapiens]
Length = 1390
Score = 35.8 bits (81), Expect = 0.020
Identities = 23/101 (22%), Positives = 44/101 (43%), Gaps = 2/101 (1%)
Query: 76 ESLGFGSYISEVKE-VLQECKTVALKRRKASSRLENLGIPEEELLRQQQELFAKARQQQA 134
+S+ F I+ E VLQ+ + RR+ LE+LG+ E ++ + +Q+
Sbjct: 169 QSMLFDKLITNTAEAVLQKMDDMKKMRRQRMRELEDLGV-FNETEESNLNMYTRGKQKDI 227
Query: 135 ELAQQEWLQMQQAAQQAQLAAASASASNQAGSSQDEEDDDD 175
+ +E Q+ + ++ + DE+DDDD
Sbjct: 228 QRTDEETTDNQEGSVESSEEGEDQEHEDDGEDEDDEDDDDD 268
>gi|41281453 serine/threonine kinase 2 [Homo sapiens]
Length = 1235
Score = 35.8 bits (81), Expect = 0.020
Identities = 32/117 (27%), Positives = 58/117 (49%), Gaps = 10/117 (8%)
Query: 45 EFIHLISSEANEICNKSEKKTISPEHVIQALESLGFGSYISEVKEVLQECKTVALKRRKA 104
E + + EA I + EK+ +++++ + I+EV++ +E + +KRRK
Sbjct: 895 EHTNRLRDEAKRIKGEQEKELSKFQNMLKNRKK----EVINEVEKAPKELRKELMKRRKE 950
Query: 105 SSRLENLGIPEEELLRQQQELFAKAR----QQQAELA--QQEWLQMQQAAQQAQLAA 155
+E + +QQQEL + QQ+AELA ++E L +Q +A+ AA
Sbjct: 951 ELAQSQHAQEQEFVQKQQQELDGSLKKIIQQQKAELANIERECLNNKQQLMRAREAA 1007
>gi|55956910 meningioma 1 [Homo sapiens]
Length = 1320
Score = 35.4 bits (80), Expect = 0.026
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 114 PEEELLRQQQELFAKARQQQAELAQQEWLQMQQAAQQAQLAAASASASNQ 163
P+ + L+QQQ+ + +QQQ + QQ+ Q QQ Q A L ++ NQ
Sbjct: 517 PDHQSLQQQQQQQQQQQQQQQQQQQQQQQQQQQQRQNAALMIKQMASRNQ 566
Score = 28.9 bits (63), Expect = 2.4
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 116 EELLRQQQELFAKARQQQAELAQQEWLQMQQAAQQAQLAAASASASNQ 163
+ L +QQQ+ + +QQQ + QQ+ Q QQ A + AS + Q
Sbjct: 520 QSLQQQQQQQQQQQQQQQQQQQQQQQQQQQQRQNAALMIKQMASRNQQ 567
>gi|221139761 zinc finger protein 853 [Homo sapiens]
Length = 659
Score = 35.0 bits (79), Expect = 0.034
Identities = 17/51 (33%), Positives = 31/51 (60%)
Query: 102 RKASSRLENLGIPEEELLRQQQELFAKARQQQAELAQQEWLQMQQAAQQAQ 152
++ +L+ E+++L+QQ++L + ++QQ QQE LQ QQ QQ +
Sbjct: 171 QQQQEQLQTQQAQEQQVLQQQEQLQQQVQEQQLLQQQQEQLQQQQLLQQQE 221
Score = 33.5 bits (75), Expect = 0.098
Identities = 20/41 (48%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 114 PEEELLRQQQELFAKARQQQAEL-AQQEWLQMQQAAQQAQL 153
PE +L+ QQQ+L + Q+Q L QQE LQ QQA +Q L
Sbjct: 148 PELQLMHQQQQLQPQQVQEQQRLQQQQEQLQTQQAQEQQVL 188
Score = 32.0 bits (71), Expect = 0.28
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 107 RLENLGIPEEELLRQQQE-LFAKARQQQAELAQQEWLQMQQAAQQAQLAAASASASNQAG 165
+L+ + E++ L+QQQE L + Q+Q L QQE Q+QQ Q+ QL Q
Sbjct: 158 QLQPQQVQEQQRLQQQQEQLQTQQAQEQQVLQQQE--QLQQQVQEQQLLQQQQEQLQQQQ 215
Query: 166 SSQDEE 171
Q +E
Sbjct: 216 LLQQQE 221
Score = 31.6 bits (70), Expect = 0.37
Identities = 25/117 (21%), Positives = 53/117 (45%), Gaps = 1/117 (0%)
Query: 60 KSEKKTISPEHVIQALESLGFGSYISEVKEVLQECKTVALKRRKASSRLENLGIPEEELL 119
+ +++ + + ++Q E L + + +E LQ+ + + L +++ + + L + +L
Sbjct: 205 QQQQEQLQQQQLLQQQEQLQQQQF-QQQQEQLQQQQQLLLLQQQGQLQQQLLQQQQAQLQ 263
Query: 120 RQQQELFAKARQQQAELAQQEWLQMQQAAQQAQLAAASASASNQAGSSQDEEDDDDI 176
+Q E QQQ L QQE LQ QQ Q Q + E+++++
Sbjct: 264 QQLLEQQQAQLQQQLLLQQQEQLQQQQQQQLLQQQQEQLQQQQLQPPPLEPEEEEEV 320
Score = 29.6 bits (65), Expect = 1.4
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 113 IPEEELLRQQQELFAKARQ-QQAELAQQEWLQMQQAAQQAQ 152
+ E++LL+QQQE + + QQ E QQ+ Q QQ Q Q
Sbjct: 198 VQEQQLLQQQQEQLQQQQLLQQQEQLQQQQFQQQQEQLQQQ 238
Score = 27.3 bits (59), Expect = 7.0
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 115 EEELLRQQQELFAKARQQQAELAQQEWLQM--QQAAQQAQ 152
+ + L +QQEL + Q+Q +L QE LQ QQ QQ Q
Sbjct: 338 QRQELERQQELERQQEQRQLQLKLQEELQQLEQQLEQQQQ 377
>gi|239757877 PREDICTED: FERM and PDZ domain containing 3 [Homo
sapiens]
Length = 1662
Score = 35.0 bits (79), Expect = 0.034
Identities = 35/127 (27%), Positives = 55/127 (43%), Gaps = 17/127 (13%)
Query: 53 EANEICNKSEKKTISPEHVIQALESLGFGSYISEVKEVLQECKTVALKRRKASSRLENLG 112
E C + SP H++ A+ GS+ + +++ + R + R E L
Sbjct: 1522 ELRASCRRVANVDKSPTHMLAAIT----GSF-QVLSSLIETFVRLVFIVRSEAQRQELLA 1576
Query: 113 IPEEE------LLRQQQELFAK------ARQQQAELAQQEWLQMQQAAQQAQLAAASASA 160
EE LLR +E A+ +QQQ + QQ+ Q QQ QQ Q+AAA+ +A
Sbjct: 1577 KVEEVVRNYTFLLRAAEESTARNLNQQQQQQQQQQQQQQQQQQQQQQQQQQQVAAAAGAA 1636
Query: 161 SNQAGSS 167
+ S
Sbjct: 1637 TEHPPGS 1643
>gi|89060961 PREDICTED: FERM and PDZ domain containing 3 [Homo
sapiens]
Length = 1810
Score = 35.0 bits (79), Expect = 0.034
Identities = 35/127 (27%), Positives = 55/127 (43%), Gaps = 17/127 (13%)
Query: 53 EANEICNKSEKKTISPEHVIQALESLGFGSYISEVKEVLQECKTVALKRRKASSRLENLG 112
E C + SP H++ A+ GS+ + +++ + R + R E L
Sbjct: 1670 ELRASCRRVANVDKSPTHMLAAIT----GSF-QVLSSLIETFVRLVFIVRSEAQRQELLA 1724
Query: 113 IPEEE------LLRQQQELFAK------ARQQQAELAQQEWLQMQQAAQQAQLAAASASA 160
EE LLR +E A+ +QQQ + QQ+ Q QQ QQ Q+AAA+ +A
Sbjct: 1725 KVEEVVRNYTFLLRAAEESTARNLNQQQQQQQQQQQQQQQQQQQQQQQQQQQVAAAAGAA 1784
Query: 161 SNQAGSS 167
+ S
Sbjct: 1785 TEHPPGS 1791
>gi|89059963 PREDICTED: FERM and PDZ domain containing 3 [Homo
sapiens]
Length = 1810
Score = 35.0 bits (79), Expect = 0.034
Identities = 35/127 (27%), Positives = 55/127 (43%), Gaps = 17/127 (13%)
Query: 53 EANEICNKSEKKTISPEHVIQALESLGFGSYISEVKEVLQECKTVALKRRKASSRLENLG 112
E C + SP H++ A+ GS+ + +++ + R + R E L
Sbjct: 1670 ELRASCRRVANVDKSPTHMLAAIT----GSF-QVLSSLIETFVRLVFIVRSEAQRQELLA 1724
Query: 113 IPEEE------LLRQQQELFAK------ARQQQAELAQQEWLQMQQAAQQAQLAAASASA 160
EE LLR +E A+ +QQQ + QQ+ Q QQ QQ Q+AAA+ +A
Sbjct: 1725 KVEEVVRNYTFLLRAAEESTARNLNQQQQQQQQQQQQQQQQQQQQQQQQQQQVAAAAGAA 1784
Query: 161 SNQAGSS 167
+ S
Sbjct: 1785 TEHPPGS 1791
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 35.0 bits (79), Expect = 0.034
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 113 IPEEELLRQQQELFAKARQQQAELAQQEWLQMQQAAQQAQLAAASASASNQAGSSQDE 170
+ +++ L+QQQ+L +QQQ +L QQ+ LQ QQ QQ Q Q Q +
Sbjct: 3900 LQQQQQLQQQQQL---QQQQQQQLQQQQQLQQQQLQQQQQQQQLQQQQQQQLQQQQQQ 3954
Score = 32.7 bits (73), Expect = 0.17
Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 99 LKRRKASSRLENLGIPEEELLRQQQEL---FAKARQQQAELAQQEWLQMQQAAQQAQ 152
L++++ + + L +++ L+QQQ+L + +QQQ +L QQ+ Q+QQ QQ Q
Sbjct: 3900 LQQQQQLQQQQQLQQQQQQQLQQQQQLQQQQLQQQQQQQQLQQQQQQQLQQQQQQLQ 3956
Score = 32.3 bits (72), Expect = 0.22
Identities = 17/54 (31%), Positives = 31/54 (57%)
Query: 99 LKRRKASSRLENLGIPEEELLRQQQELFAKARQQQAELAQQEWLQMQQAAQQAQ 152
L++++ + + +++L +QQQ+ + +QQQ QQ+ LQ QQ QQ Q
Sbjct: 3912 LQQQQQQQLQQQQQLQQQQLQQQQQQQQLQQQQQQQLQQQQQQLQQQQQQQQQQ 3965
Score = 32.3 bits (72), Expect = 0.22
Identities = 16/57 (28%), Positives = 31/57 (54%)
Query: 115 EEELLRQQQELFAKARQQQAELAQQEWLQMQQAAQQAQLAAASASASNQAGSSQDEE 171
+++L +QQQ+ + +QQ + QQ+ Q QQ QQ Q+ + S + + Q ++
Sbjct: 3937 QQQLQQQQQQQLQQQQQQLQQQQQQQQQQFQQQQQQQQMGLLNQSRTLLSPQQQQQQ 3993
Score = 30.4 bits (67), Expect = 0.83
Identities = 17/51 (33%), Positives = 24/51 (47%)
Query: 120 RQQQELFAKARQQQAELAQQEWLQMQQAAQQAQLAAASASASNQAGSSQDE 170
+QQQ+L + + QQ +L QQ+ Q Q QQ QL Q Q +
Sbjct: 3915 QQQQQLQQQQQLQQQQLQQQQQQQQLQQQQQQQLQQQQQQLQQQQQQQQQQ 3965
Score = 29.3 bits (64), Expect = 1.8
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 6/71 (8%)
Query: 97 VALKRRKASSRLENLGIPEEELLRQQQ--ELFAKARQQQAELAQQEWLQMQQAAQQAQLA 154
+AL+ SRL + E +L QQQ +L K +QQQ + QQ+ L Q A QQ Q
Sbjct: 3704 LALRSLGPDSRL----LQERQLQLQQQRMQLAQKLQQQQQQQQQQQHLLGQVAIQQQQQQ 3759
Query: 155 AASASASNQAG 165
+ G
Sbjct: 3760 GPGVQTNQALG 3770
Score = 28.1 bits (61), Expect = 4.1
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 6/55 (10%)
Query: 112 GIPEEELLRQQQELFAKARQQQAELAQQEWLQMQQAAQQAQLAAASASASNQAGS 166
G+ + EL +Q+Q RQ+ EL ++ +Q Q+ + AAA+A A GS
Sbjct: 2671 GLSQTELEKQRQ------RQRLRELLIRQQIQRNTLRQEKETAAAAAGAVGPPGS 2719
Score = 26.9 bits (58), Expect = 9.2
Identities = 19/80 (23%), Positives = 39/80 (48%), Gaps = 13/80 (16%)
Query: 88 KEVLQECKTVALKRRKASSRLENLGIPEEELLRQQQELFAKARQQQAELAQQEWLQMQ-- 145
++ LQ+ + + ++ + + + L +++ L+QQQ+ + +QQQ + QQ+ Q Q
Sbjct: 3917 QQQLQQQQQLQQQQLQQQQQQQQLQQQQQQQLQQQQQQLQQQQQQQQQQFQQQQQQQQMG 3976
Query: 146 -----------QAAQQAQLA 154
Q QQ Q+A
Sbjct: 3977 LLNQSRTLLSPQQQQQQQVA 3996
>gi|112799849 tumor protein p53 binding protein, 2 isoform 1 [Homo
sapiens]
Length = 1134
Score = 34.7 bits (78), Expect = 0.044
Identities = 18/58 (31%), Positives = 30/58 (51%)
Query: 106 SRLENLGIPEEELLRQQQELFAKARQQQAELAQQEWLQMQQAAQQAQLAAASASASNQ 163
+ L+ + +++ + QQ+L A Q+ L QQ+ Q QQ A+Q +L A NQ
Sbjct: 135 AELQEMASRQQQQIEAQQQLLATKEQRLKFLKQQDQRQQQQVAEQEKLKRLKEIAENQ 192
>gi|4885643 tumor protein p53 binding protein, 2 isoform 2 [Homo
sapiens]
Length = 1005
Score = 34.7 bits (78), Expect = 0.044
Identities = 18/58 (31%), Positives = 30/58 (51%)
Query: 106 SRLENLGIPEEELLRQQQELFAKARQQQAELAQQEWLQMQQAAQQAQLAAASASASNQ 163
+ L+ + +++ + QQ+L A Q+ L QQ+ Q QQ A+Q +L A NQ
Sbjct: 6 AELQEMASRQQQQIEAQQQLLATKEQRLKFLKQQDQRQQQQVAEQEKLKRLKEIAENQ 63
>gi|194272186 enhancer of polycomb homolog 2 [Homo sapiens]
Length = 807
Score = 34.7 bits (78), Expect = 0.044
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 112 GIPEEELLRQQQELFAKARQQQAELAQQEWLQMQQAAQQAQLAAASASASNQAGSSQD 169
GI EE+ QQ+L RQQ A+L Q++ Q Q ++QQ A +S S+ + D
Sbjct: 577 GITEEQFQTHQQQLVQMQRQQLAQLQQKQ--QSQHSSQQTHPKAQGSSTSDCMSKTLD 632
>gi|29789058 WW and C2 domain containing 1 isoform 3 [Homo sapiens]
Length = 1113
Score = 34.3 bits (77), Expect = 0.057
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 6/66 (9%)
Query: 101 RRKASSRLENLGIPEEELLRQQQELFAKARQQQAELAQQEWLQM-----QQAAQQAQLAA 155
RR+ L++ + +E L Q+E++ + +QQ+ ELAQQE+ Q+ + Q L +
Sbjct: 89 RREQEHMLKDYLVVAQEALSAQKEIY-QVKQQRLELAQQEYQQLHAVWEHKLGSQVSLVS 147
Query: 156 ASASAS 161
S+S+S
Sbjct: 148 GSSSSS 153
>gi|242247257 WW and C2 domain containing 1 isoform 2 [Homo sapiens]
Length = 1118
Score = 34.3 bits (77), Expect = 0.057
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 6/66 (9%)
Query: 101 RRKASSRLENLGIPEEELLRQQQELFAKARQQQAELAQQEWLQM-----QQAAQQAQLAA 155
RR+ L++ + +E L Q+E++ + +QQ+ ELAQQE+ Q+ + Q L +
Sbjct: 89 RREQEHMLKDYLVVAQEALSAQKEIY-QVKQQRLELAQQEYQQLHAVWEHKLGSQVSLVS 147
Query: 156 ASASAS 161
S+S+S
Sbjct: 148 GSSSSS 153
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.309 0.122 0.323
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,574,011
Number of Sequences: 37866
Number of extensions: 205277
Number of successful extensions: 3540
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 140
Number of HSP's successfully gapped in prelim test: 182
Number of HSP's that attempted gapping in prelim test: 1970
Number of HSP's gapped (non-prelim): 1158
length of query: 176
length of database: 18,247,518
effective HSP length: 95
effective length of query: 81
effective length of database: 14,650,248
effective search space: 1186670088
effective search space used: 1186670088
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.