Search of human proteins with 4503121

Search of human proteins with 4503121

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4503121 cardiotrophin 1 isoform 1 [Homo sapiens]
         (201 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4503121 cardiotrophin 1 isoform 1 [Homo sapiens]                   394   e-110
gi|216548056 cardiotrophin 1 isoform 2 [Homo sapiens]                 387   e-108
gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Hom...    38   0.005
gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Hom...    38   0.005
gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo ...    38   0.005
gi|154937380 hypothetical protein LOC642475 [Homo sapiens]             38   0.007
gi|7019351 cardiotrophin-like cytokine factor 1 [Homo sapiens]         35   0.033
gi|239745684 PREDICTED: hypothetical protein XP_002343515 [Homo ...    35   0.056
gi|24430210 interleukin 17 receptor E isoform 1 [Homo sapiens]         34   0.073
gi|24430206 interleukin 17 receptor E isoform 2 [Homo sapiens]         34   0.073
gi|24430204 interleukin 17 receptor E isoform 1 [Homo sapiens]         34   0.073
gi|239754991 PREDICTED: hypothetical protein isoform 1 [Homo sap...    33   0.16 
gi|239746344 PREDICTED: hypothetical protein XP_002343734 [Homo ...    33   0.16 
gi|154146199 sal-like 3 [Homo sapiens]                                 33   0.16 
gi|24233572 zinc finger protein 367 [Homo sapiens]                     33   0.16 
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]     33   0.16 
gi|88900501 tyrosine hydroxylase isoform a [Homo sapiens]              33   0.21 
gi|221219026 pleckstrin homology-like domain, family B, member 1...    32   0.28 
gi|221219024 pleckstrin homology-like domain, family B, member 1...    32   0.28 
gi|38424073 pleckstrin homology-like domain, family B, member 1 ...    32   0.28 
gi|54873602 hypothetical protein LOC220382 [Homo sapiens]              32   0.28 
gi|239756701 PREDICTED: similar to hCG1986016 [Homo sapiens]           32   0.36 
gi|157388904 HEAT repeat containing 2 [Homo sapiens]                   32   0.36 
gi|116292168 KRAB A domain containing 1 [Homo sapiens]                 32   0.36 
gi|4757910 cocaine- and amphetamine-regulated transcript [Homo s...    32   0.47 
gi|239751194 PREDICTED: hypothetical protein XP_002347745 [Homo ...    32   0.47 
gi|116686120 periaxin isoform 2 [Homo sapiens]                         32   0.47 
gi|88900505 tyrosine hydroxylase isoform c [Homo sapiens]              31   0.81 
gi|29789058 WW and C2 domain containing 1 isoform 3 [Homo sapiens]     31   0.81 
gi|242247257 WW and C2 domain containing 1 isoform 2 [Homo sapiens]    31   0.81 

>gi|4503121 cardiotrophin 1 isoform 1 [Homo sapiens]
          Length = 201

 Score =  394 bits (1011), Expect = e-110
 Identities = 201/201 (100%), Positives = 201/201 (100%)

Query: 1   MSRREGSLEDPQTDSSVSLLPHLEAKIRQTHSLAHLLTKYAEQLLQEYVQLQGDPFGLPS 60
           MSRREGSLEDPQTDSSVSLLPHLEAKIRQTHSLAHLLTKYAEQLLQEYVQLQGDPFGLPS
Sbjct: 1   MSRREGSLEDPQTDSSVSLLPHLEAKIRQTHSLAHLLTKYAEQLLQEYVQLQGDPFGLPS 60

Query: 61  FSPPRLPVAGLSAPAPSHAGLPVHERLRLDAAALAALPPLLDAVCRRQAELNPRAPRLLR 120
           FSPPRLPVAGLSAPAPSHAGLPVHERLRLDAAALAALPPLLDAVCRRQAELNPRAPRLLR
Sbjct: 61  FSPPRLPVAGLSAPAPSHAGLPVHERLRLDAAALAALPPLLDAVCRRQAELNPRAPRLLR 120

Query: 121 RLEDAARQARALGAAVEALLAALGAANRGPRAEPPAATASAASATGVFPAKVLGLRVCGL 180
           RLEDAARQARALGAAVEALLAALGAANRGPRAEPPAATASAASATGVFPAKVLGLRVCGL
Sbjct: 121 RLEDAARQARALGAAVEALLAALGAANRGPRAEPPAATASAASATGVFPAKVLGLRVCGL 180

Query: 181 YREWLSRTEGDLGQLLPGGSA 201
           YREWLSRTEGDLGQLLPGGSA
Sbjct: 181 YREWLSRTEGDLGQLLPGGSA 201


>gi|216548056 cardiotrophin 1 isoform 2 [Homo sapiens]
          Length = 200

 Score =  387 bits (994), Expect = e-108
 Identities = 200/201 (99%), Positives = 200/201 (99%), Gaps = 1/201 (0%)

Query: 1   MSRREGSLEDPQTDSSVSLLPHLEAKIRQTHSLAHLLTKYAEQLLQEYVQLQGDPFGLPS 60
           MSRREGSL DPQTDSSVSLLPHLEAKIRQTHSLAHLLTKYAEQLLQEYVQLQGDPFGLPS
Sbjct: 1   MSRREGSL-DPQTDSSVSLLPHLEAKIRQTHSLAHLLTKYAEQLLQEYVQLQGDPFGLPS 59

Query: 61  FSPPRLPVAGLSAPAPSHAGLPVHERLRLDAAALAALPPLLDAVCRRQAELNPRAPRLLR 120
           FSPPRLPVAGLSAPAPSHAGLPVHERLRLDAAALAALPPLLDAVCRRQAELNPRAPRLLR
Sbjct: 60  FSPPRLPVAGLSAPAPSHAGLPVHERLRLDAAALAALPPLLDAVCRRQAELNPRAPRLLR 119

Query: 121 RLEDAARQARALGAAVEALLAALGAANRGPRAEPPAATASAASATGVFPAKVLGLRVCGL 180
           RLEDAARQARALGAAVEALLAALGAANRGPRAEPPAATASAASATGVFPAKVLGLRVCGL
Sbjct: 120 RLEDAARQARALGAAVEALLAALGAANRGPRAEPPAATASAASATGVFPAKVLGLRVCGL 179

Query: 181 YREWLSRTEGDLGQLLPGGSA 201
           YREWLSRTEGDLGQLLPGGSA
Sbjct: 180 YREWLSRTEGDLGQLLPGGSA 200


>gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Homo
           sapiens]
          Length = 305

 Score = 38.1 bits (87), Expect = 0.005
 Identities = 49/170 (28%), Positives = 67/170 (39%), Gaps = 22/170 (12%)

Query: 50  QLQGDPFGLPSFSPPRLPV-AGLSAPAPSHAGLPVHERLRLDAAALAALPPLLDAVCRRQ 108
           QL   P   P+ +PP +PV A   APAP+    PV   + +  A LA  P    A     
Sbjct: 124 QLPSVPVPAPASTPPPVPVLAPAPAPAPAPVAAPVAAPVAV--AVLAPAPAPAPAPAPAP 181

Query: 109 AELNPRAPRLLRRLEDAARQARALGAAVEALLAALGAANRGPRAEP-------------P 155
           A +   AP        A   A A  AA +   +A   AN+G R +              P
Sbjct: 182 APVAAPAPAPAPAPAPAPAPAPAPDAAPQE--SAEQGANQGQRGQEPLADQLHSGISGRP 239

Query: 156 AATASAASATGVFPAKVLGLRVCGLY----REWLSRTEGDLGQLLPGGSA 201
           AA  +AASA G    K+ G  +   +    R    ++ GD+    P  SA
Sbjct: 240 AAGTAAASANGAAIKKLSGPLISDFFAKRKRSAPEKSSGDVPAPCPSPSA 289


>gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Homo
           sapiens]
          Length = 305

 Score = 38.1 bits (87), Expect = 0.005
 Identities = 49/170 (28%), Positives = 67/170 (39%), Gaps = 22/170 (12%)

Query: 50  QLQGDPFGLPSFSPPRLPV-AGLSAPAPSHAGLPVHERLRLDAAALAALPPLLDAVCRRQ 108
           QL   P   P+ +PP +PV A   APAP+    PV   + +  A LA  P    A     
Sbjct: 124 QLPSVPVPAPASTPPPVPVLAPAPAPAPAPVAAPVAAPVAV--AVLAPAPAPAPAPAPAP 181

Query: 109 AELNPRAPRLLRRLEDAARQARALGAAVEALLAALGAANRGPRAEP-------------P 155
           A +   AP        A   A A  AA +   +A   AN+G R +              P
Sbjct: 182 APVAAPAPAPAPAPAPAPAPAPAPDAAPQE--SAEQGANQGQRGQEPLADQLHSGISGRP 239

Query: 156 AATASAASATGVFPAKVLGLRVCGLY----REWLSRTEGDLGQLLPGGSA 201
           AA  +AASA G    K+ G  +   +    R    ++ GD+    P  SA
Sbjct: 240 AAGTAAASANGAAIKKLSGPLISDFFAKRKRSAPEKSSGDVPAPCPSPSA 289


>gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo
           sapiens]
          Length = 316

 Score = 38.1 bits (87), Expect = 0.005
 Identities = 49/170 (28%), Positives = 67/170 (39%), Gaps = 22/170 (12%)

Query: 50  QLQGDPFGLPSFSPPRLPV-AGLSAPAPSHAGLPVHERLRLDAAALAALPPLLDAVCRRQ 108
           QL   P   P+ +PP +PV A   APAP+    PV   + +  A LA  P    A     
Sbjct: 135 QLPSVPVPAPASTPPPVPVLAPAPAPAPAPVAAPVAAPVAV--AVLAPAPAPAPAPAPAP 192

Query: 109 AELNPRAPRLLRRLEDAARQARALGAAVEALLAALGAANRGPRAEP-------------P 155
           A +   AP        A   A A  AA +   +A   AN+G R +              P
Sbjct: 193 APVAAPAPAPAPAPAPAPAPAPAPDAAPQE--SAEQGANQGQRGQEPLADQLHSGISGRP 250

Query: 156 AATASAASATGVFPAKVLGLRVCGLY----REWLSRTEGDLGQLLPGGSA 201
           AA  +AASA G    K+ G  +   +    R    ++ GD+    P  SA
Sbjct: 251 AAGTAAASANGAAIKKLSGPLISDFFAKRKRSAPEKSSGDVPAPCPSPSA 300


>gi|154937380 hypothetical protein LOC642475 [Homo sapiens]
          Length = 719

 Score = 37.7 bits (86), Expect = 0.007
 Identities = 49/159 (30%), Positives = 64/159 (40%), Gaps = 21/159 (13%)

Query: 7   SLEDPQTDSSVSLLPHLEAKIRQTHSLAHLLTKYAEQLLQEYVQLQGDP---------FG 57
           S +DPQ  ++++    L     Q+   A LL +  E +L+  +  QGDP          G
Sbjct: 371 SADDPQRLTAMAFFTGL----LQSRPTARLLRE--EVILERLLTWQGDPEPTVRWLGLLG 424

Query: 58  LPSFSPPRLPVAGLSAPAPSHAGLPVHERLRLDAAALAALPPLL----DAVCRRQAELNP 113
           L   +  R  V  +S   P+  G       RL  AAL AL  LL      V    AEL P
Sbjct: 425 LGHLALNRRKVRHVSTLLPALLGALGEGDARLVGAALGALRRLLLRPRAPVRLLSAELGP 484

Query: 114 RAPRLLRRLEDAARQARA--LGAAVEALLAALGAANRGP 150
           R P LL    D+ R +    LG  V      L    RGP
Sbjct: 485 RLPPLLDDTRDSIRASAVGLLGTLVRRGRGGLRLGLRGP 523


>gi|7019351 cardiotrophin-like cytokine factor 1 [Homo sapiens]
          Length = 225

 Score = 35.4 bits (80), Expect = 0.033
 Identities = 45/174 (25%), Positives = 69/174 (39%), Gaps = 13/174 (7%)

Query: 27  IRQTHSLAHLLTKYAEQLLQEYVQLQGDPFGLPSFSPPRLPVAGL-SAPAPSHAGLPVHE 85
           I++T+ L   L      L   Y+   G PF  P F+PPRL    L  A         +++
Sbjct: 40  IQKTYDLTRYLEHQLRSLAGTYLNYLGPPFNEPDFNPPRLGAETLPRATVDLEVWRSLND 99

Query: 86  RLRL--DAAALAALPPLLDAVCRRQAELNPRAPRLLRRLEDAARQARALGAAVEALLAAL 143
           +LRL  +  A + L   L  + R+ A        L R L       + L  ++  ++AAL
Sbjct: 100 KLRLTQNYEAYSHLLCYLRGLNRQAA-----TAELRRSLAHFCTSLQGLLGSIAGVMAAL 154

Query: 144 G--AANRGPRAEPPAATASAASATGVFPAKVLGLRVCGLYREWLSRTEGDLGQL 195
           G       P  EP   T +   A   F  K+    +    + WL R+  D  +L
Sbjct: 155 GYPLPQPLPGTEP---TWTPGPAHSDFLQKMDDFWLLKELQTWLWRSAKDFNRL 205


>gi|239745684 PREDICTED: hypothetical protein XP_002343515 [Homo
           sapiens]
          Length = 368

 Score = 34.7 bits (78), Expect = 0.056
 Identities = 19/39 (48%), Positives = 23/39 (58%)

Query: 113 PRAPRLLRRLEDAARQARALGAAVEALLAALGAANRGPR 151
           P  P +L +LE AA   +ALGA V+ L  A G   RGPR
Sbjct: 47  PGEPAVLGQLEQAALGQQALGAVVDILQGAGGPDQRGPR 85


>gi|24430210 interleukin 17 receptor E isoform 1 [Homo sapiens]
          Length = 667

 Score = 34.3 bits (77), Expect = 0.073
 Identities = 28/66 (42%), Positives = 32/66 (48%), Gaps = 5/66 (7%)

Query: 84  HERLRLDAAALAALPPLLDAV----CRR-QAELNPRAPRLLRRLEDAARQARALGAAVEA 138
           +  L L   AL AL  LL  V    CRR Q+   P  P LL    D+  Q R +GA  E 
Sbjct: 452 YRHLGLLILALLALLTLLGVVLALTCRRPQSGPGPARPVLLLHAADSEAQRRLVGALAEL 511

Query: 139 LLAALG 144
           L AALG
Sbjct: 512 LRAALG 517


>gi|24430206 interleukin 17 receptor E isoform 2 [Homo sapiens]
          Length = 551

 Score = 34.3 bits (77), Expect = 0.073
 Identities = 28/66 (42%), Positives = 32/66 (48%), Gaps = 5/66 (7%)

Query: 84  HERLRLDAAALAALPPLLDAV----CRR-QAELNPRAPRLLRRLEDAARQARALGAAVEA 138
           +  L L   AL AL  LL  V    CRR Q+   P  P LL    D+  Q R +GA  E 
Sbjct: 336 YRHLGLLILALLALLTLLGVVLALTCRRPQSGPGPARPVLLLHAADSEAQRRLVGALAEL 395

Query: 139 LLAALG 144
           L AALG
Sbjct: 396 LRAALG 401


>gi|24430204 interleukin 17 receptor E isoform 1 [Homo sapiens]
          Length = 667

 Score = 34.3 bits (77), Expect = 0.073
 Identities = 28/66 (42%), Positives = 32/66 (48%), Gaps = 5/66 (7%)

Query: 84  HERLRLDAAALAALPPLLDAV----CRR-QAELNPRAPRLLRRLEDAARQARALGAAVEA 138
           +  L L   AL AL  LL  V    CRR Q+   P  P LL    D+  Q R +GA  E 
Sbjct: 452 YRHLGLLILALLALLTLLGVVLALTCRRPQSGPGPARPVLLLHAADSEAQRRLVGALAEL 511

Query: 139 LLAALG 144
           L AALG
Sbjct: 512 LRAALG 517


>gi|239754991 PREDICTED: hypothetical protein isoform 1 [Homo
           sapiens]
          Length = 209

 Score = 33.1 bits (74), Expect = 0.16
 Identities = 29/92 (31%), Positives = 35/92 (38%), Gaps = 8/92 (8%)

Query: 88  RLDAAALAALPPLLDAVCRRQAELNPRAPRLLRRLEDAARQARALGAAVEALLAALGAAN 147
           RL   A+   P       RR A  +P  PR  +R   AA   R  G    +   + G A 
Sbjct: 120 RLSTPAVGPRP-----AARRAAPSSPAVPREGQR---AAPPPRPSGTFAASARLSPGLAG 171

Query: 148 RGPRAEPPAATASAASATGVFPAKVLGLRVCG 179
           RG  A P A  +      GVF A   GL   G
Sbjct: 172 RGSPARPGARASHPPGPVGVFGASSQGLAAAG 203


>gi|239746344 PREDICTED: hypothetical protein XP_002343734 [Homo
           sapiens]
          Length = 194

 Score = 33.1 bits (74), Expect = 0.16
 Identities = 23/42 (54%), Positives = 26/42 (61%), Gaps = 2/42 (4%)

Query: 103 AVCR-RQAELNPRAPRLLRRLE-DAARQARALGAAVEALLAA 142
           AVCR RQA    RAPRL RRL  + AR+  AL A  + L AA
Sbjct: 49  AVCRLRQAPAPRRAPRLRRRLSFEVAREQEALVAQAQPLQAA 90


>gi|154146199 sal-like 3 [Homo sapiens]
          Length = 1300

 Score = 33.1 bits (74), Expect = 0.16
 Identities = 39/124 (31%), Positives = 47/124 (37%), Gaps = 18/124 (14%)

Query: 45  LQEYVQLQGDPFGLPSFSPPRLPVAGLSAPAPSHAGLPVHERLRLDAAALAALPPLLDAV 104
           ++  V L   P   PS SP   P    SAP P+ + LP           LAALP    A 
Sbjct: 226 IRSQVALMQRPPPRPSLSPAAAP----SAPGPAPSQLP----------GLAALPLSAGAP 271

Query: 105 CRRQAELNPRAPRLLRRLEDAARQ---ARALGAAVEALLAALGAANRGPRAEPPA-ATAS 160
               A   P AP      +  +R    A   G   E    A  +A   P A  PA A  S
Sbjct: 272 AAAIAGSGPAAPAAFEGAQPLSRPESGASTPGGPAEPSAPAAPSAAPAPAAPAPAPAPQS 331

Query: 161 AASA 164
           AAS+
Sbjct: 332 AASS 335


>gi|24233572 zinc finger protein 367 [Homo sapiens]
          Length = 350

 Score = 33.1 bits (74), Expect = 0.16
 Identities = 21/40 (52%), Positives = 24/40 (60%), Gaps = 4/40 (10%)

Query: 131 ALGAAVEALLAALGAAN----RGPRAEPPAATASAASATG 166
           A GAA  A L A  AA     RG  A PPAA+ASAA++ G
Sbjct: 86  AAGAAASAALPAAAAAEHSGLRGRGAPPPAASASAAASGG 125


>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
          Length = 538

 Score = 33.1 bits (74), Expect = 0.16
 Identities = 45/137 (32%), Positives = 55/137 (40%), Gaps = 29/137 (21%)

Query: 42  EQLLQEYVQLQGDPFGLPSF------SPPRLPVAGLSAPAPSHA--GLPVHERLRLDAAA 93
           E+L+Q+   L+    G  S+       PPR    G + PAP  A  G P        AAA
Sbjct: 74  EKLIQQRAVLRVSYKGSISYRNAARVQPPR---RGATPPAPPRAPRGAP--------AAA 122

Query: 94  LAALPPLLDAVCRRQAELNPRAPRLLRRLEDAARQARALGAAVEALLAALGAANRGPRAE 153
            AA PP   A     A +   AP         AR  RA  AA  A  +  G A  GPRA+
Sbjct: 123 AAAAPPPTPAPPPPPAPVAAAAP---------ARAPRAAAAAATAPPSP-GPAQPGPRAQ 172

Query: 154 PPAATASAASATGVFPA 170
             A  A+   A    PA
Sbjct: 173 RAAPLAAPPPAPAAPPA 189


>gi|88900501 tyrosine hydroxylase isoform a [Homo sapiens]
          Length = 528

 Score = 32.7 bits (73), Expect = 0.21
 Identities = 47/164 (28%), Positives = 60/164 (36%), Gaps = 49/164 (29%)

Query: 68  VAGLSAPAPSHAGLPVHERLRLDAAALAALPPLLDAVCRRQAELNPRAPRLLRR----LE 123
           V G  AP PS  G P        AA  A+  P             PR+PR + R    +E
Sbjct: 31  VRGQGAPGPSLTGSPWPGT----AAPAASYTP------------TPRSPRFIGRRQSLIE 74

Query: 124 DAARQARALGAAVEAL--------LAALGAANR----------GPRAEPPAATASAASAT 165
           DA ++  A  AA  A         L A+    +           PRA  P+A + A    
Sbjct: 75  DARKEREAAVAAAAAAVPSEPGDPLEAVAFEEKEGKAVLNLLFSPRATKPSALSRAVKVF 134

Query: 166 GVFPAKVLGL--------RVCGLYREWLSRTE---GDLGQLLPG 198
             F AK+  L        R  G + E+  R E   GDL  LL G
Sbjct: 135 ETFEAKIHHLETRPAQRPRAGGPHLEYFVRLEVRRGDLAALLSG 178


>gi|221219026 pleckstrin homology-like domain, family B, member 1
           isoform b [Homo sapiens]
          Length = 1319

 Score = 32.3 bits (72), Expect = 0.28
 Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 6/86 (6%)

Query: 93  ALAALPPLLDAVCRRQAELNPRA----PRLLRRLEDAARQAR--ALGAAVEALLAALGAA 146
           ++  LPPL  ++ RR     P      P+L R + ++ R  R  A GA+ E     LGA 
Sbjct: 453 SMRELPPLSPSLSRRALSPLPTRTTPDPKLNREVAESPRPRRWAAHGASPEDFSLTLGAR 512

Query: 147 NRGPRAEPPAATASAASATGVFPAKV 172
            R  R+  P    S A   G F  ++
Sbjct: 513 GRRTRSPSPTLGESLAPHKGSFSGRL 538


>gi|221219024 pleckstrin homology-like domain, family B, member 1
           isoform a [Homo sapiens]
          Length = 1377

 Score = 32.3 bits (72), Expect = 0.28
 Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 6/86 (6%)

Query: 93  ALAALPPLLDAVCRRQAELNPRA----PRLLRRLEDAARQAR--ALGAAVEALLAALGAA 146
           ++  LPPL  ++ RR     P      P+L R + ++ R  R  A GA+ E     LGA 
Sbjct: 453 SMRELPPLSPSLSRRALSPLPTRTTPDPKLNREVAESPRPRRWAAHGASPEDFSLTLGAR 512

Query: 147 NRGPRAEPPAATASAASATGVFPAKV 172
            R  R+  P    S A   G F  ++
Sbjct: 513 GRRTRSPSPTLGESLAPHKGSFSGRL 538


>gi|38424073 pleckstrin homology-like domain, family B, member 1
           isoform a [Homo sapiens]
          Length = 1377

 Score = 32.3 bits (72), Expect = 0.28
 Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 6/86 (6%)

Query: 93  ALAALPPLLDAVCRRQAELNPRA----PRLLRRLEDAARQAR--ALGAAVEALLAALGAA 146
           ++  LPPL  ++ RR     P      P+L R + ++ R  R  A GA+ E     LGA 
Sbjct: 453 SMRELPPLSPSLSRRALSPLPTRTTPDPKLNREVAESPRPRRWAAHGASPEDFSLTLGAR 512

Query: 147 NRGPRAEPPAATASAASATGVFPAKV 172
            R  R+  P    S A   G F  ++
Sbjct: 513 GRRTRSPSPTLGESLAPHKGSFSGRL 538


>gi|54873602 hypothetical protein LOC220382 [Homo sapiens]
          Length = 426

 Score = 32.3 bits (72), Expect = 0.28
 Identities = 36/118 (30%), Positives = 42/118 (35%), Gaps = 15/118 (12%)

Query: 57  GLPSFSPPRLPVAGLSAPAPSHAGLPVHERLRLDAAALAALPPLLDAVCRRQAELNPRA- 115
           GL   +PP         P+PS A  P    L   +A   A P    A  RR+A     A 
Sbjct: 106 GLMGAAPP-------GPPSPSAADTPAKRPLAAPSAPTVAAPAHGKAAPRREASQAAAAA 158

Query: 116 ---PRLLRRLEDAARQ----ARALGAAVEALLAALGAANRGPRAEPPAATASAASATG 166
               R L  L D+ R     A   G  V A  A LG A  G      A  A A +  G
Sbjct: 159 SLQSRSLAALFDSLRHVPGGAEPAGGEVAAPAAGLGGAGTGGAGGDVAGPAGATAIPG 216


>gi|239756701 PREDICTED: similar to hCG1986016 [Homo sapiens]
          Length = 325

 Score = 32.0 bits (71), Expect = 0.36
 Identities = 18/38 (47%), Positives = 22/38 (57%)

Query: 114 RAPRLLRRLEDAARQARALGAAVEALLAALGAANRGPR 151
           R   +L +LE AA   +ALGA V+ L  A G   RGPR
Sbjct: 5   RLAAVLGQLEQAALGQQALGAVVDILQGAGGPEQRGPR 42


>gi|157388904 HEAT repeat containing 2 [Homo sapiens]
          Length = 855

 Score = 32.0 bits (71), Expect = 0.36
 Identities = 41/126 (32%), Positives = 48/126 (38%), Gaps = 28/126 (22%)

Query: 71  LSAPAPSHAGLPVHERLRLDAAALAALPPL-----------LDAVCRRQAELNPRA---- 115
           ++AP P+  G    E + L  A    LP L           L+A+ R   E  P A    
Sbjct: 10  VAAPHPAE-GAETAEAVELSRALSRLLPGLEADSKPGRRRALEALRRALEEPGPAADPTA 68

Query: 116 ----------PRLLRRLEDAARQARALGAAVEALLAALGAANRGPRAEPPAATASAASAT 165
                     PRLLR L D A   RAL  AV  L   L  A R   A P    A AA   
Sbjct: 69  FQGPWARLLLPRLLRCLSDPAEGCRAL--AVHLLDLGLRRAARPRDALPRLLPALAARLA 126

Query: 166 GVFPAK 171
           G  PA+
Sbjct: 127 GPVPAR 132


>gi|116292168 KRAB A domain containing 1 [Homo sapiens]
          Length = 1030

 Score = 32.0 bits (71), Expect = 0.36
 Identities = 39/132 (29%), Positives = 52/132 (39%), Gaps = 22/132 (16%)

Query: 6   GSLEDPQTDSSVSLLPHLEAKIRQT---HSLAHLLTKYAEQLLQEYVQLQGDPFGLPSFS 62
           G+ +DP   S +   P +    R     H    +  K  E+LL      QG P  LPS S
Sbjct: 716 GTAQDPCPVSQLEKRPRVSEASRGLELGHGRPRVAAKTHERLLP-----QGPP-ELPSES 769

Query: 63  PP-RLPVAGLSAPA--------PSHAGLPVHERLRLDAAALA----ALPPLLDAVCRRQA 109
           PP  LP    + P         P H G P+ + L    AALA     L   L  + +  A
Sbjct: 770 PPPELPPPEAAPPVLPASSLQPPCHCGKPLQQELHSLGAALAEKLDRLATALAGLAQEVA 829

Query: 110 ELNPRAPRLLRR 121
            +  +  RL RR
Sbjct: 830 TMRTQVNRLGRR 841


>gi|4757910 cocaine- and amphetamine-regulated transcript [Homo
           sapiens]
          Length = 116

 Score = 31.6 bits (70), Expect = 0.47
 Identities = 19/53 (35%), Positives = 27/53 (50%)

Query: 87  LRLDAAALAALPPLLDAVCRRQAELNPRAPRLLRRLEDAARQARALGAAVEAL 139
           L L  AAL  + PLL    +  AEL PRA  +   ++DA+ +   + A  E L
Sbjct: 9   LPLLGAALLLMLPLLGTRAQEDAELQPRALDIYSAVDDASHEKELIEALQEVL 61


>gi|239751194 PREDICTED: hypothetical protein XP_002347745 [Homo
           sapiens]
          Length = 325

 Score = 31.6 bits (70), Expect = 0.47
 Identities = 18/38 (47%), Positives = 22/38 (57%)

Query: 114 RAPRLLRRLEDAARQARALGAAVEALLAALGAANRGPR 151
           R   +L +LE AA   +ALGA V+ L  A G   RGPR
Sbjct: 5   RLAAVLGQLEQAALGQQALGAVVDILQGAGGPDQRGPR 42


>gi|116686120 periaxin isoform 2 [Homo sapiens]
          Length = 1461

 Score = 31.6 bits (70), Expect = 0.47
 Identities = 39/141 (27%), Positives = 52/141 (36%), Gaps = 18/141 (12%)

Query: 50  QLQGDPFGLPSFSPPR--------------LPVAGLSAPAPSHAGLPV--HERLRLDAAA 93
           +L G   G+P  S P+              LP  GL APAP     P    +  +++  A
Sbjct: 240 RLPGAEVGVPQVSAPKAAPSAEAAGGFALHLPTLGLGAPAPPAVEAPAVGIQVPQVELPA 299

Query: 94  LAALP--PLLDAVCRRQAELNPRAPRLLRRLEDAARQARALGAAVEALLAALGAANRGPR 151
           L +LP  P L  +  R+  ++   P L              GA VEA   A   A + PR
Sbjct: 300 LPSLPTLPTLPCLETREGAVSVVVPTLDVAAPTVGVDLALPGAEVEARGEAPEVALKMPR 359

Query: 152 AEPPAATASAASATGVFPAKV 172
              P   A A        AKV
Sbjct: 360 LSFPRFGARAKEVAEAKVAKV 380



 Score = 30.0 bits (66), Expect = 1.4
 Identities = 34/99 (34%), Positives = 43/99 (43%), Gaps = 13/99 (13%)

Query: 63  PPRLPVAGLSAPAPSHAGLPVHERLRLDAAALAALPPLLDAVCRRQAELNPRAPRL-LRR 121
           P  L V    AP       P   RLR    A A   P+  A  RR+ +L    PRL +R 
Sbjct: 142 PGALGVPADLAPVDVEFSFPKFSRLRRGLKAEAVKGPVPAAPARRRLQL----PRLRVRE 197

Query: 122 LEDAARQARALGAA-------VEALLAALGAANRGPRAE 153
           + + A+ AR   AA       VEA +AA GA    P+ E
Sbjct: 198 VAEEAQAARLAAAAPPPRKAKVEAEVAA-GARFTAPQVE 235


>gi|88900505 tyrosine hydroxylase isoform c [Homo sapiens]
          Length = 524

 Score = 30.8 bits (68), Expect = 0.81
 Identities = 45/161 (27%), Positives = 59/161 (36%), Gaps = 49/161 (30%)

Query: 71  LSAPAPSHAGLPVHERLRLDAAALAALPPLLDAVCRRQAELNPRAPRLLRR----LEDAA 126
           + AP PS  G P        AA  A+  P             PR+PR + R    +EDA 
Sbjct: 30  MGAPGPSLTGSPWPGT----AAPAASYTP------------TPRSPRFIGRRQSLIEDAR 73

Query: 127 RQARALGAAVEAL--------LAALGAANR----------GPRAEPPAATASAASATGVF 168
           ++  A  AA  A         L A+    +           PRA  P+A + A      F
Sbjct: 74  KEREAAVAAAAAAVPSEPGDPLEAVAFEEKEGKAVLNLLFSPRATKPSALSRAVKVFETF 133

Query: 169 PAKVLGL--------RVCGLYREWLSRTE---GDLGQLLPG 198
            AK+  L        R  G + E+  R E   GDL  LL G
Sbjct: 134 EAKIHHLETRPAQRPRAGGPHLEYFVRLEVRRGDLAALLSG 174


>gi|29789058 WW and C2 domain containing 1 isoform 3 [Homo sapiens]
          Length = 1113

 Score = 30.8 bits (68), Expect = 0.81
 Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 3/78 (3%)

Query: 86  RLRLDAAALAALPPLLDAVCRRQAELNPRAPRLLRRLEDAARQARALGAAVEALLAALGA 145
           R RL+    AA      A+  R  +LN +  +L+R LE+A RQ   L + +++L +++ +
Sbjct: 374 RKRLEKDLQAARDTQSKALTER-LKLNSKRNQLVRELEEATRQVATLHSQLKSLSSSMQS 432

Query: 146 ANRGPRAEPPAATASAAS 163
            + G  + P + T+S  S
Sbjct: 433 LSSG--SSPGSLTSSRGS 448


>gi|242247257 WW and C2 domain containing 1 isoform 2 [Homo sapiens]
          Length = 1118

 Score = 30.8 bits (68), Expect = 0.81
 Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 3/78 (3%)

Query: 86  RLRLDAAALAALPPLLDAVCRRQAELNPRAPRLLRRLEDAARQARALGAAVEALLAALGA 145
           R RL+    AA      A+  R  +LN +  +L+R LE+A RQ   L + +++L +++ +
Sbjct: 374 RKRLEKDLQAARDTQSKALTER-LKLNSKRNQLVRELEEATRQVATLHSQLKSLSSSMQS 432

Query: 146 ANRGPRAEPPAATASAAS 163
            + G  + P + T+S  S
Sbjct: 433 LSSG--SSPGSLTSSRGS 448


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.133    0.386 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,423,209
Number of Sequences: 37866
Number of extensions: 391597
Number of successful extensions: 2149
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 102
Number of HSP's that attempted gapping in prelim test: 2069
Number of HSP's gapped (non-prelim): 187
length of query: 201
length of database: 18,247,518
effective HSP length: 97
effective length of query: 104
effective length of database: 14,574,516
effective search space: 1515749664
effective search space used: 1515749664
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.