Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 4502809
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4502809 chitotriosidase [Homo sapiens]
(466 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4502809 chitotriosidase [Homo sapiens] 971 0.0
gi|133893286 acidic chitinase isoform c [Homo sapiens] 519 e-147
gi|68533255 chitinase 3-like 2 isoform a [Homo sapiens] 421 e-118
gi|144226251 chitinase 3-like 1 [Homo sapiens] 414 e-115
gi|68533253 chitinase 3-like 2 isoform b [Homo sapiens] 408 e-114
gi|42542398 acidic chitinase isoform a [Homo sapiens] 376 e-104
gi|58386720 oviductal glycoprotein 1 precursor [Homo sapiens] 362 e-100
gi|68533260 chitinase 3-like 2 isoform c [Homo sapiens] 347 2e-95
gi|4758092 chitobiase, di-N-acetyl- [Homo sapiens] 48 2e-05
gi|161169015 neuron navigator 2 isoform 3 [Homo sapiens] 33 0.72
gi|161169013 neuron navigator 2 isoform 1 [Homo sapiens] 33 0.72
gi|38044282 neuron navigator 2 isoform 2 [Homo sapiens] 33 0.72
gi|126116581 retina and anterior neural fold homeobox [Homo sapi... 32 1.6
gi|207442677 hypothetical protein LOC100128569 [Homo sapiens] 32 1.6
gi|218083269 chitinase domain containing 1 isoform c [Homo sapiens] 30 3.6
gi|218083233 chitinase domain containing 1 isoform b [Homo sapiens] 30 3.6
gi|218083215 chitinase domain containing 1 isoform a [Homo sapiens] 30 3.6
gi|218083182 chitinase domain containing 1 isoform a [Homo sapiens] 30 3.6
gi|218083142 chitinase domain containing 1 isoform a [Homo sapiens] 30 3.6
gi|66529407 tensin [Homo sapiens] 30 3.6
gi|5453722 lysophospholipase 1 [Homo sapiens] 30 3.6
gi|109148552 keratin 3 [Homo sapiens] 30 3.6
gi|4507103 small nuclear RNA activating complex, polypeptide 2, ... 30 3.6
gi|13376064 zinc finger protein 408 [Homo sapiens] 30 3.6
gi|5803177 basic beta 2 syntrophin [Homo sapiens] 30 3.6
gi|239582735 radial spoke head 4 homolog A isoform 2 [Homo sapiens] 30 4.7
gi|58219006 radial spoke head 4 homolog A isoform 1 [Homo sapiens] 30 4.7
gi|239748752 PREDICTED: hypothetical protein XP_002346787 [Homo ... 30 4.7
gi|22749415 integral membrane protein 1 [Homo sapiens] 30 4.7
gi|47419930 chondroitin sulfate proteoglycan 4 [Homo sapiens] 30 6.1
>gi|4502809 chitotriosidase [Homo sapiens]
Length = 466
Score = 971 bits (2509), Expect = 0.0
Identities = 466/466 (100%), Positives = 466/466 (100%)
Query: 1 MVRSVAWAGFMVLLMIPWGSAAKLVCYFTNWAQYRQGEARFLPKDLDPSLCTHLIYAFAG 60
MVRSVAWAGFMVLLMIPWGSAAKLVCYFTNWAQYRQGEARFLPKDLDPSLCTHLIYAFAG
Sbjct: 1 MVRSVAWAGFMVLLMIPWGSAAKLVCYFTNWAQYRQGEARFLPKDLDPSLCTHLIYAFAG 60
Query: 61 MTNHQLSTTEWNDETLYQEFNGLKKMNPKLKTLLAIGGWNFGTQKFTDMVATANNRQTFV 120
MTNHQLSTTEWNDETLYQEFNGLKKMNPKLKTLLAIGGWNFGTQKFTDMVATANNRQTFV
Sbjct: 61 MTNHQLSTTEWNDETLYQEFNGLKKMNPKLKTLLAIGGWNFGTQKFTDMVATANNRQTFV 120
Query: 121 NSAIRFLRKYSFDGLDLDWEYPGSQGSPAVDKERFTTLVQDLANAFQQEAQTSGKERLLL 180
NSAIRFLRKYSFDGLDLDWEYPGSQGSPAVDKERFTTLVQDLANAFQQEAQTSGKERLLL
Sbjct: 121 NSAIRFLRKYSFDGLDLDWEYPGSQGSPAVDKERFTTLVQDLANAFQQEAQTSGKERLLL 180
Query: 181 SAAVPAGQTYVDAGYEVDKIAQNLDFVNLMAYDFHGSWEKVTGHNSPLYKRQEESGAAAS 240
SAAVPAGQTYVDAGYEVDKIAQNLDFVNLMAYDFHGSWEKVTGHNSPLYKRQEESGAAAS
Sbjct: 181 SAAVPAGQTYVDAGYEVDKIAQNLDFVNLMAYDFHGSWEKVTGHNSPLYKRQEESGAAAS 240
Query: 241 LNVDAAVQQWLQKGTPASKLILGMPTYGRSFTLASSSDTRVGAPATGSGTPGPFTKEGGM 300
LNVDAAVQQWLQKGTPASKLILGMPTYGRSFTLASSSDTRVGAPATGSGTPGPFTKEGGM
Sbjct: 241 LNVDAAVQQWLQKGTPASKLILGMPTYGRSFTLASSSDTRVGAPATGSGTPGPFTKEGGM 300
Query: 301 LAYYEVCSWKGATKQRIQDQKVPYIFRDNQWVGFDDVESFKTKVSYLKQKGLGGAMVWAL 360
LAYYEVCSWKGATKQRIQDQKVPYIFRDNQWVGFDDVESFKTKVSYLKQKGLGGAMVWAL
Sbjct: 301 LAYYEVCSWKGATKQRIQDQKVPYIFRDNQWVGFDDVESFKTKVSYLKQKGLGGAMVWAL 360
Query: 361 DLDDFAGFSCNQGRYPLIQTLRQELSLPYLPSGTPELEVPKPGQPSEPEHGPSPGQDTFC 420
DLDDFAGFSCNQGRYPLIQTLRQELSLPYLPSGTPELEVPKPGQPSEPEHGPSPGQDTFC
Sbjct: 361 DLDDFAGFSCNQGRYPLIQTLRQELSLPYLPSGTPELEVPKPGQPSEPEHGPSPGQDTFC 420
Query: 421 QGKADGLYPNPRERSSFYSCAAGRLFQQSCPTGLVFSNSCKCCTWN 466
QGKADGLYPNPRERSSFYSCAAGRLFQQSCPTGLVFSNSCKCCTWN
Sbjct: 421 QGKADGLYPNPRERSSFYSCAAGRLFQQSCPTGLVFSNSCKCCTWN 466
>gi|133893286 acidic chitinase isoform c [Homo sapiens]
Length = 476
Score = 519 bits (1336), Expect = e-147
Identities = 246/482 (51%), Positives = 322/482 (66%), Gaps = 24/482 (4%)
Query: 1 MVRSVAWAGFMVLLMIPWGSAAKLVCYFTNWAQYRQGEARFLPKDLDPSLCTHLIYAFAG 60
M + + G +++L + GSA +L CYFTNWAQYR G RF+P ++DP LCTHLIYAFAG
Sbjct: 1 MTKLILLTGLVLILNLQLGSAYQLTCYFTNWAQYRPGLGRFMPDNIDPCLCTHLIYAFAG 60
Query: 61 MTNHQLSTTEWNDETLYQEFNGLKKMNPKLKTLLAIGGWNFGTQKFTDMVATANNRQTFV 120
N++++T EWND TLYQ FNGLK N +LKTLLAIGGWNFGT FT MV+T NRQTF+
Sbjct: 61 RQNNEITTIEWNDVTLYQAFNGLKNKNSQLKTLLAIGGWNFGTAPFTAMVSTPENRQTFI 120
Query: 121 NSAIRFLRKYSFDGLDLDWEYPGSQGSPAVDKERFTTLVQDLANAFQQEAQTSGKERLLL 180
S I+FLR+Y FDGLD DWEYPGS+GSP DK FT LVQ++ AF+QEA+ K RL++
Sbjct: 121 TSVIKFLRQYEFDGLDFDWEYPGSRGSPPQDKHLFTVLVQEMREAFEQEAKQINKPRLMV 180
Query: 181 SAAVPAGQTYVDAGYEVDKIAQNLDFVNLMAYDFHGSWEKVTGHNSPLYKRQEESGAAAS 240
+AAV AG + + +GYE+ +++Q LD++++M YD HGSWE TG NSPLYK ++G+ A
Sbjct: 181 TAAVAAGISNIQSGYEIPQLSQYLDYIHVMTYDLHGSWEGYTGENSPLYKYPTDTGSNAY 240
Query: 241 LNVDAAVQQWLQKGTPASKLILGMPTYGRSFTLASSSDTRVGAPATGSGTPGPFTKEGGM 300
LNVD + W G PA KLI+G PTYG +F L++ S+T +GAP +G+G GP+ KE G+
Sbjct: 241 LNVDYVMNYWKDNGAPAEKLIVGFPTYGHNFILSNPSNTGIGAPTSGAGPAGPYAKESGI 300
Query: 301 LAYYEVCSW--KGATKQRIQDQKVPYIFRDNQWVGFDDVESFKTKVSYLKQKGLGGAMVW 358
AYYE+C++ GAT+ Q+VPY ++ N WVG+D+++SF K +LK GGAMVW
Sbjct: 301 WAYYEICTFLKNGATQGWDAPQEVPYAYQGNVWVGYDNIKSFDIKAQWLKHNKFGGAMVW 360
Query: 359 ALDLDDFAGFSCNQGRYPLIQTLRQELSLPYLPSGTPELEVPKPGQPSEP---------- 408
A+DLDDF G CNQG++PLI TL++ L G P QP EP
Sbjct: 361 AIDLDDFTGTFCNQGKFPLISTLKKAL-------GLQSASCTAPAQPIEPITAAPSGSGN 413
Query: 409 -----EHGPSPGQDTFCQGKADGLYPNPRERSSFYSCAAGRLFQQSCPTGLVFSNSCKCC 463
G S G FC +A+GLYP R++F+ C G +QQ+C GLVF SC CC
Sbjct: 414 GSGSSSSGGSSGGSGFCAVRANGLYPVANNRNAFWHCVNGVTYQQNCQAGLVFDTSCDCC 473
Query: 464 TW 465
W
Sbjct: 474 NW 475
>gi|68533255 chitinase 3-like 2 isoform a [Homo sapiens]
Length = 390
Score = 421 bits (1083), Expect = e-118
Identities = 200/382 (52%), Positives = 279/382 (73%), Gaps = 9/382 (2%)
Query: 7 WAGFMVLLMIPWGSAAKLVCYFTNWAQYRQGEARFLPKDLDPSLCTHLIYAFAGMTNHQL 66
WAG +VLL++ GSA KLVCYFTNW+Q RQ +F P+++DP LC+HLIY+FA + N+++
Sbjct: 12 WAGVVVLLLLQGGSAYKLVCYFTNWSQDRQEPGKFTPENIDPFLCSHLIYSFASIENNKV 71
Query: 67 STTEWNDETLYQEFNGLKKMNPKLKTLLAIGGWNFGTQKFTDMVATANNRQTFVNSAIRF 126
+ ++ LYQ N LK NPKLK LL+IGG+ FG++ F MV ++ +R F+NS I F
Sbjct: 72 IIKDKSEVMLYQTINSLKTKNPKLKILLSIGGYLFGSKGFHPMVDSSTSRLEFINSIILF 131
Query: 127 LRKYSFDGLDLDWEYPGSQGSPAVDKERFTTLVQDLANAFQQEAQTSGKERLLLSAAVPA 186
LR ++FDGLD+ W YP + + FT L+ +LA AFQ++ S KERLLL+A V A
Sbjct: 132 LRNHNFDGLDVSWIYPDQK-----ENTHFTVLIHELAEAFQKDFTKSTKERLLLTAGVSA 186
Query: 187 GQTYVDAGYEVDKIAQNLDFVNLMAYDFHGSWEK--VTGHNSPLYKRQEESGAAASLNVD 244
G+ +D Y+V+K+A++LDF+NL+++DFHGSWEK +TGHNSPL K ++ G ++ NV+
Sbjct: 187 GRQMIDNSYQVEKLAKDLDFINLLSFDFHGSWEKPLITGHNSPLSKGWQDRGPSSYYNVE 246
Query: 245 AAVQQWLQKGTPASKLILGMPTYGRSFTLASSSDTRVGAPATGSGTPGPFTKEGGMLAYY 304
AV W+ KG P+ K+++G+PTYG SFTLA S++T VGAPA+G G GP T+ G LAYY
Sbjct: 247 YAVGYWIHKGMPSEKVVMGIPTYGHSFTLA-SAETTVGAPASGPGAAGPITESSGFLAYY 305
Query: 305 EVCSW-KGATKQRIQDQKVPYIFRDNQWVGFDDVESFKTKVSYLKQKGLGGAMVWALDLD 363
E+C + KGA R+QDQ+VPY + NQWVG+DDV+S +TKV +LK LGGAM+W++D+D
Sbjct: 306 EICQFLKGAKITRLQDQQVPYAVKGNQWVGYDDVKSMETKVQFLKNLNLGGAMIWSIDMD 365
Query: 364 DFAGFSCNQGRYPLIQTLRQEL 385
DF G SCNQG YPL+Q +++ L
Sbjct: 366 DFTGKSCNQGPYPLVQAVKRSL 387
>gi|144226251 chitinase 3-like 1 [Homo sapiens]
Length = 383
Score = 414 bits (1063), Expect = e-115
Identities = 202/380 (53%), Positives = 272/380 (71%), Gaps = 9/380 (2%)
Query: 9 GFMVLLMIPWGSAAKLVCYFTNWAQYRQGEARFLPKDLDPSLCTHLIYAFAGMTNHQLST 68
GF+VL+++ SA KLVCY+T+W+QYR+G+ P LD LCTH+IY+FA ++N + T
Sbjct: 9 GFVVLVLLQCCSAYKLVCYYTSWSQYREGDGSCFPDALDRFLCTHIIYSFANISNDHIDT 68
Query: 69 TEWNDETLYQEFNGLKKMNPKLKTLLAIGGWNFGTQKFTDMVATANNRQTFVNSAIRFLR 128
EWND TLY N LK NP LKTLL++GGWNFG+Q+F+ + + +R+TF+ S FLR
Sbjct: 69 WEWNDVTLYGMLNTLKNRNPNLKTLLSVGGWNFGSQRFSKIASNTQSRRTFIKSVPPFLR 128
Query: 129 KYSFDGLDLDWEYPGSQGSPAVDKERFTTLVQDLANAFQQEAQTSGKERLLLSAAVPAGQ 188
+ FDGLDL W YPG + DK+ FTTL++++ F +EAQ GK++LLLSAA+ AG+
Sbjct: 129 THGFDGLDLAWLYPGRR-----DKQHFTTLIKEMKAEFIKEAQ-PGKKQLLLSAALSAGK 182
Query: 189 TYVDAGYEVDKIAQNLDFVNLMAYDFHGSWEKVTGHNSPLYKRQEESGAAASLNVDAAVQ 248
+D+ Y++ KI+Q+LDF+++M YDFHG+W TGH+SPL++ QE++ N D AV
Sbjct: 183 VTIDSSYDIAKISQHLDFISIMTYDFHGAWRGTTGHHSPLFRGQEDASPDRFSNTDYAVG 242
Query: 249 QWLQKGTPASKLILGMPTYGRSFTLASSSDTRVGAPATGSGTPGPFTKEGGMLAYYEVCS 308
L+ G PASKL++G+PT+GRSFTLA SS+T VGAP +G G PG FTKE G LAYYE+C
Sbjct: 243 YMLRLGAPASKLVMGIPTFGRSFTLA-SSETGVGAPISGPGIPGRFTKEAGTLAYYEICD 301
Query: 309 W-KGATKQRIQDQKVPYIFRDNQWVGFDDVESFKTKVSYLKQKGLGGAMVWALDLDDFAG 367
+ +GAT RI Q+VPY + NQWVG+DD ES K+KV YLK + L GAMVWALDLDDF G
Sbjct: 302 FLRGATVHRILGQQVPYATKGNQWVGYDDQESVKSKVQYLKDRQLAGAMVWALDLDDFQG 361
Query: 368 FSCNQG-RYPLIQTLRQELS 386
C Q R+PL ++ L+
Sbjct: 362 SFCGQDLRFPLTNAIKDALA 381
>gi|68533253 chitinase 3-like 2 isoform b [Homo sapiens]
Length = 380
Score = 408 bits (1049), Expect = e-114
Identities = 194/370 (52%), Positives = 270/370 (72%), Gaps = 9/370 (2%)
Query: 19 GSAAKLVCYFTNWAQYRQGEARFLPKDLDPSLCTHLIYAFAGMTNHQLSTTEWNDETLYQ 78
GSA KLVCYFTNW+Q RQ +F P+++DP LC+HLIY+FA + N+++ + ++ LYQ
Sbjct: 14 GSAYKLVCYFTNWSQDRQEPGKFTPENIDPFLCSHLIYSFASIENNKVIIKDKSEVMLYQ 73
Query: 79 EFNGLKKMNPKLKTLLAIGGWNFGTQKFTDMVATANNRQTFVNSAIRFLRKYSFDGLDLD 138
N LK NPKLK LL+IGG+ FG++ F MV ++ +R F+NS I FLR ++FDGLD+
Sbjct: 74 TINSLKTKNPKLKILLSIGGYLFGSKGFHPMVDSSTSRLEFINSIILFLRNHNFDGLDVS 133
Query: 139 WEYPGSQGSPAVDKERFTTLVQDLANAFQQEAQTSGKERLLLSAAVPAGQTYVDAGYEVD 198
W YP + + FT L+ +LA AFQ++ S KERLLL+A V AG+ +D Y+V+
Sbjct: 134 WIYPDQK-----ENTHFTVLIHELAEAFQKDFTKSTKERLLLTAGVSAGRQMIDNSYQVE 188
Query: 199 KIAQNLDFVNLMAYDFHGSWEK--VTGHNSPLYKRQEESGAAASLNVDAAVQQWLQKGTP 256
K+A++LDF+NL+++DFHGSWEK +TGHNSPL K ++ G ++ NV+ AV W+ KG P
Sbjct: 189 KLAKDLDFINLLSFDFHGSWEKPLITGHNSPLSKGWQDRGPSSYYNVEYAVGYWIHKGMP 248
Query: 257 ASKLILGMPTYGRSFTLASSSDTRVGAPATGSGTPGPFTKEGGMLAYYEVCSW-KGATKQ 315
+ K+++G+PTYG SFTLA S++T VGAPA+G G GP T+ G LAYYE+C + KGA
Sbjct: 249 SEKVVMGIPTYGHSFTLA-SAETTVGAPASGPGAAGPITESSGFLAYYEICQFLKGAKIT 307
Query: 316 RIQDQKVPYIFRDNQWVGFDDVESFKTKVSYLKQKGLGGAMVWALDLDDFAGFSCNQGRY 375
R+QDQ+VPY + NQWVG+DDV+S +TKV +LK LGGAM+W++D+DDF G SCNQG Y
Sbjct: 308 RLQDQQVPYAVKGNQWVGYDDVKSMETKVQFLKNLNLGGAMIWSIDMDDFTGKSCNQGPY 367
Query: 376 PLIQTLRQEL 385
PL+Q +++ L
Sbjct: 368 PLVQAVKRSL 377
>gi|42542398 acidic chitinase isoform a [Homo sapiens]
Length = 368
Score = 376 bits (966), Expect = e-104
Identities = 180/374 (48%), Positives = 241/374 (64%), Gaps = 24/374 (6%)
Query: 109 MVATANNRQTFVNSAIRFLRKYSFDGLDLDWEYPGSQGSPAVDKERFTTLVQDLANAFQQ 168
MV+T NRQTF+ S I+FLR+Y FDGLD DWEYPGS+GSP DK FT LVQ++ AF+Q
Sbjct: 1 MVSTPENRQTFITSVIKFLRQYEFDGLDFDWEYPGSRGSPPQDKHLFTVLVQEMREAFEQ 60
Query: 169 EAQTSGKERLLLSAAVPAGQTYVDAGYEVDKIAQNLDFVNLMAYDFHGSWEKVTGHNSPL 228
EA+ K RL+++AAV AG + + +GYE+ +++Q LD++++M YD HGSWE TG NSPL
Sbjct: 61 EAKQINKPRLMVTAAVAAGISNIQSGYEIPQLSQYLDYIHVMTYDLHGSWEGYTGENSPL 120
Query: 229 YKRQEESGAAASLNVDAAVQQWLQKGTPASKLILGMPTYGRSFTLASSSDTRVGAPATGS 288
YK ++G+ A LNVD + W G PA KLI+G PTYG +F L++ S+T +GAP +G+
Sbjct: 121 YKYPTDTGSNAYLNVDYVMNYWKDNGAPAEKLIVGFPTYGHNFILSNPSNTGIGAPTSGA 180
Query: 289 GTPGPFTKEGGMLAYYEVCSW--KGATKQRIQDQKVPYIFRDNQWVGFDDVESFKTKVSY 346
G GP+ KE G+ AYYE+C++ GAT+ Q+VPY ++ N WVG+D+++SF K +
Sbjct: 181 GPAGPYAKESGIWAYYEICTFLKNGATQGWDAPQEVPYAYQGNVWVGYDNIKSFDIKAQW 240
Query: 347 LKQKGLGGAMVWALDLDDFAGFSCNQGRYPLIQTLRQELSLPYLPSGTPELEVPKPGQPS 406
LK GGAMVWA+DLDDF G CNQG++PLI TL++ L G P QP
Sbjct: 241 LKHNKFGGAMVWAIDLDDFTGTFCNQGKFPLISTLKKAL-------GLQSASCTAPAQPI 293
Query: 407 EP---------------EHGPSPGQDTFCQGKADGLYPNPRERSSFYSCAAGRLFQQSCP 451
EP G S G FC +A+GLYP R++F+ C G +QQ+C
Sbjct: 294 EPITAAPSGSGNGSGSSSSGGSSGGSGFCAVRANGLYPVANNRNAFWHCVNGVTYQQNCQ 353
Query: 452 TGLVFSNSCKCCTW 465
GLVF SC CC W
Sbjct: 354 AGLVFDTSCDCCNW 367
>gi|58386720 oviductal glycoprotein 1 precursor [Homo sapiens]
Length = 678
Score = 362 bits (928), Expect = e-100
Identities = 188/398 (47%), Positives = 255/398 (64%), Gaps = 12/398 (3%)
Query: 1 MVRSVAWAGFMVLLMIPWGSAAKLVCYFTNWAQYRQGEARFLPKDLDPSLCTHLIYAFAG 60
M + + W G +++L G+A KLVCYFTNWA R G A LP DLDP LCTHLI+AFA
Sbjct: 1 MWKLLLWVGLVLVLKHHDGAAHKLVCYFTNWAHSRPGPASILPHDLDPFLCTHLIFAFAS 60
Query: 61 MTNHQLSTTEWNDET-LYQEFNGLKKMNPKLKTLLAIGGWNFGTQKFTDMVATANNRQTF 119
M N+Q+ + DE LY EFN LK+ N +LKTLL+IGGWNFGT +FT M++T NR+ F
Sbjct: 61 MNNNQIVAKDLQDEKILYPEFNKLKERNRELKTLLSIGGWNFGTSRFTTMLSTFANREKF 120
Query: 120 VNSAIRFLRKYSFDGLDLDWEYPGSQGSPAVDKERFTTLVQDLANAFQQEAQTSGKERLL 179
+ S I LR + FDGLDL + YPG +GSP D+ F L+++L AF++EA + + RLL
Sbjct: 121 IASVISLLRTHDFDGLDLFFLYPGLRGSPMHDRWTFLFLIEELLFAFRKEALLTMRPRLL 180
Query: 180 LSAAVPAGQTYVDAGYEVDKIAQNLDFVNLMAYDFHGSWEKVTGHNSPLYKRQEESGAAA 239
LSAAV V Y+V + + LDF+N+++YD HGSWE+ TGHNSPL+ E+ ++A
Sbjct: 181 LSAAVSGVPHIVQTSYDVRFLGRLLDFINVLSYDLHGSWERFTGHNSPLFSLPEDPKSSA 240
Query: 240 SLNVDAAVQQWLQKGTPASKLILGMPTYGRSFTLASSSDTRVGAPATGSGTPGPFTKEGG 299
A+ W + G P+ KLI+G+PTYGR+F L +S + A A G +PG +TK+ G
Sbjct: 241 -----YAMNYWRKLGAPSEKLIMGIPTYGRTFRLLKASKNGLQARAIGPASPGKYTKQEG 295
Query: 300 MLAYYEVCSWK-GATKQRIQDQKVPYIFRDNQWVGFDDVESFKTKVSYLKQKGLGGAMVW 358
LAY+E+CS+ GA K I Q VPY + +WVG+D+ SF K +++++ GGAMVW
Sbjct: 296 FLAYFEICSFVWGAKKHWIDYQYVPYANKGKEWVGYDNAISFSYKAWFIRREHFGGAMVW 355
Query: 359 ALDLDDFAGFSCNQGRYPLIQTL-----RQELSLPYLP 391
LD+DD G C G +PL+ L R E S LP
Sbjct: 356 TLDMDDVRGTFCGTGPFPLVYVLNDILVRAEFSSTSLP 393
>gi|68533260 chitinase 3-like 2 isoform c [Homo sapiens]
Length = 311
Score = 347 bits (889), Expect = 2e-95
Identities = 166/313 (53%), Positives = 228/313 (72%), Gaps = 9/313 (2%)
Query: 76 LYQEFNGLKKMNPKLKTLLAIGGWNFGTQKFTDMVATANNRQTFVNSAIRFLRKYSFDGL 135
LYQ N LK NPKLK LL+IGG+ FG++ F MV ++ +R F+NS I FLR ++FDGL
Sbjct: 2 LYQTINSLKTKNPKLKILLSIGGYLFGSKGFHPMVDSSTSRLEFINSIILFLRNHNFDGL 61
Query: 136 DLDWEYPGSQGSPAVDKERFTTLVQDLANAFQQEAQTSGKERLLLSAAVPAGQTYVDAGY 195
D+ W YP + + FT L+ +LA AFQ++ S KERLLL+A V AG+ +D Y
Sbjct: 62 DVSWIYPDQK-----ENTHFTVLIHELAEAFQKDFTKSTKERLLLTAGVSAGRQMIDNSY 116
Query: 196 EVDKIAQNLDFVNLMAYDFHGSWEK--VTGHNSPLYKRQEESGAAASLNVDAAVQQWLQK 253
+V+K+A++LDF+NL+++DFHGSWEK +TGHNSPL K ++ G ++ NV+ AV W+ K
Sbjct: 117 QVEKLAKDLDFINLLSFDFHGSWEKPLITGHNSPLSKGWQDRGPSSYYNVEYAVGYWIHK 176
Query: 254 GTPASKLILGMPTYGRSFTLASSSDTRVGAPATGSGTPGPFTKEGGMLAYYEVCSW-KGA 312
G P+ K+++G+PTYG SFTLAS+ +T VGAPA+G G GP T+ G LAYYE+C + KGA
Sbjct: 177 GMPSEKVVMGIPTYGHSFTLASA-ETTVGAPASGPGAAGPITESSGFLAYYEICQFLKGA 235
Query: 313 TKQRIQDQKVPYIFRDNQWVGFDDVESFKTKVSYLKQKGLGGAMVWALDLDDFAGFSCNQ 372
R+QDQ+VPY + NQWVG+DDV+S +TKV +LK LGGAM+W++D+DDF G SCNQ
Sbjct: 236 KITRLQDQQVPYAVKGNQWVGYDDVKSMETKVQFLKNLNLGGAMIWSIDMDDFTGKSCNQ 295
Query: 373 GRYPLIQTLRQEL 385
G YPL+Q +++ L
Sbjct: 296 GPYPLVQAVKRSL 308
>gi|4758092 chitobiase, di-N-acetyl- [Homo sapiens]
Length = 385
Score = 48.1 bits (113), Expect = 2e-05
Identities = 60/266 (22%), Positives = 109/266 (40%), Gaps = 35/266 (13%)
Query: 116 RQTFVNSAIRFLRKYSFDGLDLDWEYPGSQGSPAVDKERFTTLVQDLANAFQQEAQTSGK 175
R +++ + + DG+++D E + SP D T LV++ ++F +E + S
Sbjct: 119 RASWIAQKLNLAKTQYMDGINIDIEQEVNCLSPEYDA--LTALVKETTDSFHREIEGSQ- 175
Query: 176 ERLLLSAAVPAGQTYVDAG-YEVDKIAQNLDFVNLMAYDFHGS-W-EKVTGHNSPLYKRQ 232
++ V +D Y IA DF+ +M+YD W E + N+P Q
Sbjct: 176 ----VTFDVAWSPKNIDRRCYNYTGIADACDFLFVMSYDEQSQIWSECIAAANAPY--NQ 229
Query: 233 EESGAAASLNVDAAVQQWLQKGTPASKLILGMPTYGRSFTLASSSDTRVGAPATGSGTPG 292
+G +++ KL++G+P YG +T + S+ V A
Sbjct: 230 TLTG----------YNDYIKMSINPKKLVMGVPWYGYDYTCLNLSEDHVCTIAKVPFRGA 279
Query: 293 PFTKEGGMLAYYEV------CSWKGATKQRIQDQKVPYI-FRDN----QWVGFDDVESFK 341
P + G Y+ S G + DQ+ PY ++D V +D+ +S
Sbjct: 280 PCSDAAGRQVPYKTIMKQINSSISGNLWDK--DQRAPYYNYKDPAGHFHQVWYDNPQSIS 337
Query: 342 TKVSYLKQKGLGGAMVWALDLDDFAG 367
K +Y++ L G +W + D++G
Sbjct: 338 LKATYIQNYRLRGIGMWNANCLDYSG 363
>gi|161169015 neuron navigator 2 isoform 3 [Homo sapiens]
Length = 2365
Score = 32.7 bits (73), Expect = 0.72
Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 15/83 (18%)
Query: 368 FSCNQGRYPLIQTLRQELSLPYLPS-------------GTPELEVP-KPGQPSEPEHGPS 413
FS ++ + Q +Q LS P P+ GTP+ +VP P P +P H P+
Sbjct: 121 FSLSRYKQQQQQPQKQHLSSPLPPAVSQVAGAPSQCQAGTPQQQVPVTPQAPCQP-HQPA 179
Query: 414 PGQDTFCQGKADGLYPNPRERSS 436
P Q + Q + P P R S
Sbjct: 180 PHQQSKAQAEMQSRLPGPTARVS 202
>gi|161169013 neuron navigator 2 isoform 1 [Homo sapiens]
Length = 2432
Score = 32.7 bits (73), Expect = 0.72
Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 15/83 (18%)
Query: 368 FSCNQGRYPLIQTLRQELSLPYLPS-------------GTPELEVP-KPGQPSEPEHGPS 413
FS ++ + Q +Q LS P P+ GTP+ +VP P P +P H P+
Sbjct: 185 FSLSRYKQQQQQPQKQHLSSPLPPAVSQVAGAPSQCQAGTPQQQVPVTPQAPCQP-HQPA 243
Query: 414 PGQDTFCQGKADGLYPNPRERSS 436
P Q + Q + P P R S
Sbjct: 244 PHQQSKAQAEMQSRLPGPTARVS 266
>gi|38044282 neuron navigator 2 isoform 2 [Homo sapiens]
Length = 2429
Score = 32.7 bits (73), Expect = 0.72
Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 15/83 (18%)
Query: 368 FSCNQGRYPLIQTLRQELSLPYLPS-------------GTPELEVP-KPGQPSEPEHGPS 413
FS ++ + Q +Q LS P P+ GTP+ +VP P P +P H P+
Sbjct: 185 FSLSRYKQQQQQPQKQHLSSPLPPAVSQVAGAPSQCQAGTPQQQVPVTPQAPCQP-HQPA 243
Query: 414 PGQDTFCQGKADGLYPNPRERSS 436
P Q + Q + P P R S
Sbjct: 244 PHQQSKAQAEMQSRLPGPTARVS 266
>gi|126116581 retina and anterior neural fold homeobox [Homo
sapiens]
Length = 346
Score = 31.6 bits (70), Expect = 1.6
Identities = 17/33 (51%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 384 ELSLPYLPSGTPELEVPKPGQPSEP-EHGPSPG 415
E S P P+ PE E P+P P EP E PSPG
Sbjct: 82 EPSPPPAPAPAPEYEAPRPYCPKEPGEARPSPG 114
>gi|207442677 hypothetical protein LOC100128569 [Homo sapiens]
Length = 209
Score = 31.6 bits (70), Expect = 1.6
Identities = 14/25 (56%), Positives = 17/25 (68%)
Query: 378 IQTLRQELSLPYLPSGTPELEVPKP 402
+QTLRQE + P +PSGT E P P
Sbjct: 1 MQTLRQEAARPCIPSGTLEASFPAP 25
>gi|218083269 chitinase domain containing 1 isoform c [Homo sapiens]
Length = 362
Score = 30.4 bits (67), Expect = 3.6
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 16/85 (18%)
Query: 196 EVDKIAQNLDFVNLMAYDFHGSWEKVTGHNSPLYKRQEESGAAASLNVDAAVQQWLQKGT 255
E +++A LD +LM YD+ + + G N+PL V A VQ K
Sbjct: 214 EFEQLAPVLDGFSLMTYDYSTAHQP--GPNAPLSW------------VRACVQVLDPKSK 259
Query: 256 PASKLILGMPTYGRSFTLASSSDTR 280
SK++LG+ YG + A+S D R
Sbjct: 260 WRSKILLGLNFYGMDY--ATSKDAR 282
>gi|218083233 chitinase domain containing 1 isoform b [Homo sapiens]
Length = 418
Score = 30.4 bits (67), Expect = 3.6
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 16/85 (18%)
Query: 196 EVDKIAQNLDFVNLMAYDFHGSWEKVTGHNSPLYKRQEESGAAASLNVDAAVQQWLQKGT 255
E +++A LD +LM YD+ + + G N+PL V A VQ K
Sbjct: 270 EFEQLAPVLDGFSLMTYDYSTAHQP--GPNAPLSW------------VRACVQVLDPKSK 315
Query: 256 PASKLILGMPTYGRSFTLASSSDTR 280
SK++LG+ YG + A+S D R
Sbjct: 316 WRSKILLGLNFYGMDY--ATSKDAR 338
>gi|218083215 chitinase domain containing 1 isoform a [Homo sapiens]
Length = 393
Score = 30.4 bits (67), Expect = 3.6
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 16/85 (18%)
Query: 196 EVDKIAQNLDFVNLMAYDFHGSWEKVTGHNSPLYKRQEESGAAASLNVDAAVQQWLQKGT 255
E +++A LD +LM YD+ + + G N+PL V A VQ K
Sbjct: 245 EFEQLAPVLDGFSLMTYDYSTAHQP--GPNAPLSW------------VRACVQVLDPKSK 290
Query: 256 PASKLILGMPTYGRSFTLASSSDTR 280
SK++LG+ YG + A+S D R
Sbjct: 291 WRSKILLGLNFYGMDY--ATSKDAR 313
>gi|218083182 chitinase domain containing 1 isoform a [Homo sapiens]
Length = 393
Score = 30.4 bits (67), Expect = 3.6
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 16/85 (18%)
Query: 196 EVDKIAQNLDFVNLMAYDFHGSWEKVTGHNSPLYKRQEESGAAASLNVDAAVQQWLQKGT 255
E +++A LD +LM YD+ + + G N+PL V A VQ K
Sbjct: 245 EFEQLAPVLDGFSLMTYDYSTAHQP--GPNAPLSW------------VRACVQVLDPKSK 290
Query: 256 PASKLILGMPTYGRSFTLASSSDTR 280
SK++LG+ YG + A+S D R
Sbjct: 291 WRSKILLGLNFYGMDY--ATSKDAR 313
>gi|218083142 chitinase domain containing 1 isoform a [Homo sapiens]
Length = 393
Score = 30.4 bits (67), Expect = 3.6
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 16/85 (18%)
Query: 196 EVDKIAQNLDFVNLMAYDFHGSWEKVTGHNSPLYKRQEESGAAASLNVDAAVQQWLQKGT 255
E +++A LD +LM YD+ + + G N+PL V A VQ K
Sbjct: 245 EFEQLAPVLDGFSLMTYDYSTAHQP--GPNAPLSW------------VRACVQVLDPKSK 290
Query: 256 PASKLILGMPTYGRSFTLASSSDTR 280
SK++LG+ YG + A+S D R
Sbjct: 291 WRSKILLGLNFYGMDY--ATSKDAR 313
>gi|66529407 tensin [Homo sapiens]
Length = 1735
Score = 30.4 bits (67), Expect = 3.6
Identities = 22/73 (30%), Positives = 27/73 (36%), Gaps = 4/73 (5%)
Query: 365 FAGFSCNQGRYPLIQTLRQELSLPYLPSGTPELEVPKPGQP--SEPEHGPSPGQDTFCQG 422
+ G+S + R P + RQ + Y TP V P S P PSP F QG
Sbjct: 1323 YGGYSTPEDRRPTLS--RQSSASGYQAPSTPSFPVSPAYYPGLSSPATSPSPDSAAFRQG 1380
Query: 423 KADGLYPNPRERS 435
P R S
Sbjct: 1381 SPTPALPEKRRMS 1393
>gi|5453722 lysophospholipase 1 [Homo sapiens]
Length = 230
Score = 30.4 bits (67), Expect = 3.6
Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 217 SWEKVTGHNSPLYKRQEESGAAASLNVDAAVQQWLQKGTPASKLILGMPTYGRSFTLASS 276
SW + G SP + E A+ N+ A + Q ++ G P++++ILG + G + +L ++
Sbjct: 71 SWFDIIGL-SPDSQEDESGIKQAAENIKALIDQEVKNGIPSNRIILGGFSQGGALSLYTA 129
Query: 277 SDTR 280
T+
Sbjct: 130 LTTQ 133
>gi|109148552 keratin 3 [Homo sapiens]
Length = 628
Score = 30.4 bits (67), Expect = 3.6
Identities = 30/135 (22%), Positives = 56/135 (41%), Gaps = 17/135 (12%)
Query: 83 LKKMNPKLKTLLAIGGWNFGTQKFTDMVATANNRQTFVNSAIRFLRKYSFDGLDLDWEYP 142
L++ N L+T WN Q+ T ++ NN + + I +LR Y + L
Sbjct: 219 LEQQNKVLETK-----WNLLQQQGTSSISGTNNLEPLFENHINYLRSYLDNIL------- 266
Query: 143 GSQGSPAVDKERFTTLVQDLANAFQQEA-QTSGKERLLLSAAVPAGQTY---VDAGYEVD 198
G +G + + LV+D ++ E + + E ++ Y V+ +VD
Sbjct: 267 GERGRLDSELKNMEDLVEDFKKKYEDEINKRTAAENEFVTLKKDVDSAYMNKVELQAKVD 326
Query: 199 KIAQNLDFVNLMAYD 213
+ +DF+ + YD
Sbjct: 327 ALIDEIDFLRTL-YD 340
>gi|4507103 small nuclear RNA activating complex, polypeptide 2,
45kDa [Homo sapiens]
Length = 334
Score = 30.4 bits (67), Expect = 3.6
Identities = 14/32 (43%), Positives = 16/32 (50%)
Query: 386 SLPYLPSGTPELEVPKPGQPSEPEHGPSPGQD 417
S P PS P P P +PSE GPS +D
Sbjct: 170 SAPAAPSSAPRTPDPAPEKPSESSAGPSTEED 201
>gi|13376064 zinc finger protein 408 [Homo sapiens]
Length = 720
Score = 30.4 bits (67), Expect = 3.6
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Query: 139 WEYPGSQG----SPAVDKERFTTLVQDLANAFQQEAQTSGKE 176
W P S+G P +DKE +V ++ +A QQE + G++
Sbjct: 170 WPQPSSEGPSLTQPGLDKEAAVAVVTEVESAVQQEVASPGED 211
>gi|5803177 basic beta 2 syntrophin [Homo sapiens]
Length = 540
Score = 30.4 bits (67), Expect = 3.6
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 6/61 (9%)
Query: 233 EESGAAASLNVDAAVQQWLQKGTPASKLILGMPTYGRSFTLASSSDTRVGAPATGSGTPG 292
E SG + SL DAA + PA+ G+P G + D+ G+P+ G G P
Sbjct: 42 ELSGESLSLTGDAAAAELEPALGPAAAAFNGLPNGG------GAGDSLPGSPSRGLGPPS 95
Query: 293 P 293
P
Sbjct: 96 P 96
>gi|239582735 radial spoke head 4 homolog A isoform 2 [Homo sapiens]
Length = 600
Score = 30.0 bits (66), Expect = 4.7
Identities = 27/81 (33%), Positives = 33/81 (40%), Gaps = 23/81 (28%)
Query: 391 PSGTPELEVPKPGQPSEPEHGPSP----GQDTFCQGKADGL----------YPNPRERSS 436
P+G PE P P P EP PSP QD ++D YP+P E+SS
Sbjct: 74 PAG-PETSSPAPVSPREPSSSPSPLAPARQDLAAPPQSDRTTSVIPEAGTPYPDPLEQSS 132
Query: 437 --------FYSCAAGRLFQQS 449
S + G FQQS
Sbjct: 133 DKRESTPHHTSQSEGNTFQQS 153
>gi|58219006 radial spoke head 4 homolog A isoform 1 [Homo sapiens]
Length = 716
Score = 30.0 bits (66), Expect = 4.7
Identities = 27/81 (33%), Positives = 33/81 (40%), Gaps = 23/81 (28%)
Query: 391 PSGTPELEVPKPGQPSEPEHGPSP----GQDTFCQGKADGL----------YPNPRERSS 436
P+G PE P P P EP PSP QD ++D YP+P E+SS
Sbjct: 74 PAG-PETSSPAPVSPREPSSSPSPLAPARQDLAAPPQSDRTTSVIPEAGTPYPDPLEQSS 132
Query: 437 --------FYSCAAGRLFQQS 449
S + G FQQS
Sbjct: 133 DKRESTPHHTSQSEGNTFQQS 153
>gi|239748752 PREDICTED: hypothetical protein XP_002346787 [Homo
sapiens]
Length = 278
Score = 30.0 bits (66), Expect = 4.7
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 391 PSGTPELEVPKPGQPSEPEHGPSP 414
P+ + E +P+P +P EP GPSP
Sbjct: 67 PAASAETALPRPREPPEPGAGPSP 90
>gi|22749415 integral membrane protein 1 [Homo sapiens]
Length = 705
Score = 30.0 bits (66), Expect = 4.7
Identities = 16/66 (24%), Positives = 25/66 (37%), Gaps = 2/66 (3%)
Query: 209 LMAYDFHGSWEKVTGHNSPLYKRQEESGAAASLNVD--AAVQQWLQKGTPASKLILGMPT 266
L+ Y FH +W ++SP G + + D WL+ TP ++
Sbjct: 468 LITYTFHSTWVTSEAYSSPSIVLSARGGDGSRIIFDDFREAYYWLRHNTPEDAKVMSWWD 527
Query: 267 YGRSFT 272
YG T
Sbjct: 528 YGYQIT 533
>gi|47419930 chondroitin sulfate proteoglycan 4 [Homo sapiens]
Length = 2322
Score = 29.6 bits (65), Expect = 6.1
Identities = 15/50 (30%), Positives = 23/50 (46%)
Query: 256 PASKLILGMPTYGRSFTLASSSDTRVGAPATGSGTPGPFTKEGGMLAYYE 305
P S +L +P R+ S T G P + +P P +GG L++ E
Sbjct: 2170 PYSVALLSVPEAARTEAGKPESSTPTGEPGPMASSPEPAVAKGGFLSFLE 2219
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.134 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,800,923
Number of Sequences: 37866
Number of extensions: 1022544
Number of successful extensions: 3518
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 3470
Number of HSP's gapped (non-prelim): 53
length of query: 466
length of database: 18,247,518
effective HSP length: 106
effective length of query: 360
effective length of database: 14,233,722
effective search space: 5124139920
effective search space used: 5124139920
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.