CSPG4 30474

Name: CSPG4	Sequence: fasta or formatted (2322aa)		NCBI GI: 47419930
Description: chondroitin sulfate proteoglycan 4		Referenced in: Protein Glycosylation
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.6 224 2 C cysteine 0.5 12 1 D aspartate 4.7 110 2 E glutamate 6.3 147 4 F phenylalanine 3.8 89 2 G glycine 8.7 201 4 H histidine 2.9 67 2 I isoleucine 2.3 54 2 K lysine 1.2 29 2 L leucine 12.1 280 4 M methionine 1.1 26 1 N asparagine 2.1 48 1 P proline 7.8 182 3 Q glutamine 6.1 141 3 R arginine 6.3 146 2 S serine 7.1 164 3 T threonine 6.2 143 2 V valine 8.4 195 2 W tryptophan 0.9 22 2 Y tyrosine 1.8 42 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 chondroitin sulfate proteoglycan 4 LOC100291610 0.164 PREDICTED: similar to KIAA1920 protein LOC100131154 0.097 PREDICTED: similar to chondroitin sulfate proteogly... LOC100131154 0.097 PREDICTED: similar to chondroitin sulfate proteogly... LOC100287819 0.097 PREDICTED: hypothetical protein XP_002344245 LOC100287758 0.097 PREDICTED: hypothetical protein XP_002344244 FREM2 0.040 FRAS1-related extracellular matrix protein 2 precurs... FREM3 0.039 PREDICTED: FRAS1 related extracellular matrix 3 [Ho... FREM3 0.039 PREDICTED: FRAS1 related extracellular matrix 3 [Ho... FREM3 0.039 PREDICTED: FRAS1 related extracellular matrix 3 [Ho... FREM1 0.036 FRAS1 related extracellular matrix 1 FRAS1 0.032 Fraser syndrome 1 NRXN2 0.012 neurexin 2 isoform alpha-2 precursor NRXN2 0.011 neurexin 2 isoform alpha-1 precursor NRXN1 0.010 neurexin 1 isoform alpha1 precursor NRXN1 0.009 neurexin 1 isoform alpha2 precursor NRXN3 0.008 neurexin 3 isoform 1 precursor AGRN 0.006 agrin CNTNAP4 0.006 cell recognition protein CASPR4 isoform 1 FAT1 0.005 FAT tumor suppressor 1 precursor CNTNAP5 0.005 contactin associated protein-like 5 LAMA1 0.005 laminin, alpha 1 precursor HSPG2 0.005 heparan sulfate proteoglycan 2 CNTNAP1 0.004 contactin associated protein 1 precursor EGFLAM 0.004 EGF-like, fibronectin type III and laminin G domains... EGFLAM 0.004 EGF-like, fibronectin type III and laminin G domains... SLIT2 0.004 slit homolog 2 LAMA2 0.004 laminin alpha 2 subunit isoform b precursor LAMA2 0.004 laminin alpha 2 subunit isoform a precursor LAMA3 0.004 laminin alpha 3 subunit isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.