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Search of human proteins with 4502363
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4502363 BCL2-antagonist/killer 1 [Homo sapiens]
(211 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4502363 BCL2-antagonist/killer 1 [Homo sapiens] 429 e-121
gi|239751987 PREDICTED: hypothetical protein XP_002348091 [Homo ... 418 e-117
gi|72198346 B-cell lymphoma protein 2 beta isoform [Homo sapiens] 70 1e-12
gi|20336335 BCL2-like 1 isoform 1 [Homo sapiens] 70 2e-12
gi|72198189 B-cell lymphoma protein 2 alpha isoform [Homo sapiens] 68 6e-12
gi|4757842 BCL2-like 2 protein [Homo sapiens] 64 9e-11
gi|4757838 BCL2-associated X protein isoform beta [Homo sapiens] 55 3e-08
gi|20631958 BCL2-associated X protein isoform alpha [Homo sapiens] 54 7e-08
gi|242117893 BCL2-associated X protein isoform sigma [Homo sapiens] 54 1e-07
gi|11386165 myeloid cell leukemia sequence 1 isoform 1 [Homo sap... 52 4e-07
gi|20631964 BCL2-associated X protein isoform delta [Homo sapiens] 45 3e-05
gi|14210524 BCL2-related ovarian killer [Homo sapiens] 45 3e-05
gi|168480072 BCL2-related protein A1 isoform 2 [Homo sapiens] 45 4e-05
gi|4757840 BCL2-related protein A1 isoform 1 [Homo sapiens] 45 4e-05
gi|15812178 zinc finger protein 36, C3H type-like 2 [Homo sapiens] 32 0.51
gi|71040096 Rho GTPase activating protein 30 isoform 2 [Homo sap... 31 0.67
gi|31324577 molecule interacting with Rab13 [Homo sapiens] 30 1.1
gi|156938257 leucine rich repeat containing 16B [Homo sapiens] 30 1.5
gi|11545853 concentrative Na+-nucleoside cotransporter [Homo sap... 29 2.6
gi|22538461 nuclear receptor co-repressor 1 [Homo sapiens] 28 4.4
gi|187937179 apoptosis-associated tyrosine kinase [Homo sapiens] 28 4.4
gi|148727255 microtubule associated serine/threonine kinase fami... 28 5.7
gi|19718731 bromodomain-containing protein 4 isoform long [Homo ... 28 7.4
gi|56549645 nucleoporin 98kD isoform 4 [Homo sapiens] 28 7.4
gi|21264365 nucleoporin 98kD isoform 1 [Homo sapiens] 28 7.4
gi|27735045 peptidylprolyl isomerase-like 6 isoform 1 [Homo sapi... 27 9.7
gi|162329587 peptidylprolyl isomerase-like 6 isoform 2 [Homo sap... 27 9.7
gi|109638745 transforming growth factor beta 1 induced transcrip... 27 9.7
gi|21361591 transforming growth factor beta 1 induced transcript... 27 9.7
gi|139394599 hypermethylated in cancer 2 [Homo sapiens] 27 9.7
>gi|4502363 BCL2-antagonist/killer 1 [Homo sapiens]
Length = 211
Score = 429 bits (1103), Expect = e-121
Identities = 211/211 (100%), Positives = 211/211 (100%)
Query: 1 MASGQGPGPPRQECGEPALPSASEEQVAQDTEEVFRSYVFYRHQQEQEAEGVAAPADPEM 60
MASGQGPGPPRQECGEPALPSASEEQVAQDTEEVFRSYVFYRHQQEQEAEGVAAPADPEM
Sbjct: 1 MASGQGPGPPRQECGEPALPSASEEQVAQDTEEVFRSYVFYRHQQEQEAEGVAAPADPEM 60
Query: 61 VTLPLQPSSTMGQVGRQLAIIGDDINRRYDSEFQTMLQHLQPTAENAYEYFTKIATSLFE 120
VTLPLQPSSTMGQVGRQLAIIGDDINRRYDSEFQTMLQHLQPTAENAYEYFTKIATSLFE
Sbjct: 61 VTLPLQPSSTMGQVGRQLAIIGDDINRRYDSEFQTMLQHLQPTAENAYEYFTKIATSLFE 120
Query: 121 SGINWGRVVALLGFGYRLALHVYQHGLTGFLGQVTRFVVDFMLHHCIARWIAQRGGWVAA 180
SGINWGRVVALLGFGYRLALHVYQHGLTGFLGQVTRFVVDFMLHHCIARWIAQRGGWVAA
Sbjct: 121 SGINWGRVVALLGFGYRLALHVYQHGLTGFLGQVTRFVVDFMLHHCIARWIAQRGGWVAA 180
Query: 181 LNLGNGPILNVLVVLGVVLLGQFVVRRFFKS 211
LNLGNGPILNVLVVLGVVLLGQFVVRRFFKS
Sbjct: 181 LNLGNGPILNVLVVLGVVLLGQFVVRRFFKS 211
>gi|239751987 PREDICTED: hypothetical protein XP_002348091 [Homo
sapiens]
Length = 211
Score = 418 bits (1075), Expect = e-117
Identities = 205/211 (97%), Positives = 207/211 (98%)
Query: 1 MASGQGPGPPRQECGEPALPSASEEQVAQDTEEVFRSYVFYRHQQEQEAEGVAAPADPEM 60
MASGQGPGPPRQECGEPALPSASEEQVAQDTEEVFRSYVFY HQQEQEAEG AAPADPEM
Sbjct: 1 MASGQGPGPPRQECGEPALPSASEEQVAQDTEEVFRSYVFYHHQQEQEAEGAAAPADPEM 60
Query: 61 VTLPLQPSSTMGQVGRQLAIIGDDINRRYDSEFQTMLQHLQPTAENAYEYFTKIATSLFE 120
VTLPLQPSSTMGQVGRQLAIIGDDINRRYDSEFQTMLQHLQPTAENAYEYFTKIA+SLFE
Sbjct: 61 VTLPLQPSSTMGQVGRQLAIIGDDINRRYDSEFQTMLQHLQPTAENAYEYFTKIASSLFE 120
Query: 121 SGINWGRVVALLGFGYRLALHVYQHGLTGFLGQVTRFVVDFMLHHCIARWIAQRGGWVAA 180
SGINWGRVVALLGF YRLALH+YQ GLTGFLGQVTRFVVDFMLHHCIARWIAQRGGWVAA
Sbjct: 121 SGINWGRVVALLGFSYRLALHIYQRGLTGFLGQVTRFVVDFMLHHCIARWIAQRGGWVAA 180
Query: 181 LNLGNGPILNVLVVLGVVLLGQFVVRRFFKS 211
LNLGNGPILNVLVVLGVVLLGQFVVRRFFKS
Sbjct: 181 LNLGNGPILNVLVVLGVVLLGQFVVRRFFKS 211
>gi|72198346 B-cell lymphoma protein 2 beta isoform [Homo sapiens]
Length = 205
Score = 70.5 bits (171), Expect = 1e-12
Identities = 43/141 (30%), Positives = 64/141 (45%), Gaps = 13/141 (9%)
Query: 53 AAPADPEMVTLPLQ-PSSTMGQVGRQLAII-----------GDDINRRYDSEFQTMLQHL 100
AA DP T PLQ P++ G L+ + GDD +RRY +F M L
Sbjct: 60 AASRDPVARTSPLQTPAAPGAAAGPALSPVPPVVHLTLRQAGDDFSRRYRRDFAEMSSQL 119
Query: 101 QPTAENAYEYFTKIATSLFESGINWGRVVALLGFGYRLALHVYQHGLTGFLGQVTRFVVD 160
T A F + LF G+NWGR+VA FG + + ++ + + ++ +
Sbjct: 120 HLTPFTARGRFATVVEELFRDGVNWGRIVAFFEFGGVMCVESVNREMSPLVDNIALWMTE 179
Query: 161 FMLHHCIARWIAQRGGWVAAL 181
++ H + WI GGWV AL
Sbjct: 180 YLNRH-LHTWIQDNGGWVGAL 199
>gi|20336335 BCL2-like 1 isoform 1 [Homo sapiens]
Length = 233
Score = 69.7 bits (169), Expect = 2e-12
Identities = 43/152 (28%), Positives = 65/152 (42%), Gaps = 16/152 (10%)
Query: 71 MGQVGRQLAIIGDDINRRYDSEFQTMLQHLQPTAENAYEYFTKIATSLFESGINWGRVVA 130
M V + L GD+ RY F + L T AY+ F ++ LF G+NWGR+VA
Sbjct: 83 MAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFRDGVNWGRIVA 142
Query: 131 LLGFGYRLALHVYQHGLTGFLGQVTRFVVDFMLHHCIARWIAQRGGWVAALNL-GNGP-- 187
FG L + + + ++ ++ ++ H + WI + GGW + L GN
Sbjct: 143 FFSFGGALCVESVDKEMQVLVSRIAAWMATYLNDH-LEPWIQENGGWDTFVELYGNNAAA 201
Query: 188 ------------ILNVLVVLGVVLLGQFVVRR 207
L + V GVVLLG R+
Sbjct: 202 ESRKGQERFNRWFLTGMTVAGVVLLGSLFSRK 233
>gi|72198189 B-cell lymphoma protein 2 alpha isoform [Homo sapiens]
Length = 239
Score = 67.8 bits (164), Expect = 6e-12
Identities = 45/152 (29%), Positives = 68/152 (44%), Gaps = 14/152 (9%)
Query: 53 AAPADPEMVTLPLQ-PSSTMGQVGRQLAII-----------GDDINRRYDSEFQTMLQHL 100
AA DP T PLQ P++ G L+ + GDD +RRY +F M L
Sbjct: 60 AASRDPVARTSPLQTPAAPGAAAGPALSPVPPVVHLTLRQAGDDFSRRYRRDFAEMSSQL 119
Query: 101 QPTAENAYEYFTKIATSLFESGINWGRVVALLGFGYRLALHVYQHGLTGFLGQVTRFVVD 160
T A F + LF G+NWGR+VA FG + + ++ + + ++ +
Sbjct: 120 HLTPFTARGRFATVVEELFRDGVNWGRIVAFFEFGGVMCVESVNREMSPLVDNIALWMTE 179
Query: 161 FMLHHCIARWIAQRGGWVAALNLGNGPILNVL 192
++ H + WI GGW A + L GP + L
Sbjct: 180 YLNRH-LHTWIQDNGGWDAFVEL-YGPSMRPL 209
>gi|4757842 BCL2-like 2 protein [Homo sapiens]
Length = 193
Score = 63.9 bits (154), Expect = 9e-11
Identities = 56/198 (28%), Positives = 80/198 (40%), Gaps = 26/198 (13%)
Query: 28 AQDTEEVFRSYVFYRHQQEQEAEGVAAPADPEMVTLPLQPSSTMGQVGRQLAIIGDDINR 87
A DT + +V Y+ +Q+ G P L + + GD+
Sbjct: 7 APDTRALVADFVGYKLRQKGYVCGAGPGEGPAADPLH-----------QAMRAAGDEFET 55
Query: 88 RYDSEFQTMLQHLQPTAENAYEYFTKIATSLFESGINWGRVVALLGFGYRLALHVYQHGL 147
R+ F + L T +A + FT+++ LF+ G NWGR+VA FG L +
Sbjct: 56 RFRRTFSDLAAQLHVTPGSAQQRFTQVSDELFQGGPNWGRLVAFFVFGAALCAESVNKEM 115
Query: 148 TGFLGQVTRFVVDFMLHHCIARWIAQRGGWV------------AALNLGNGPILNVLVVL 195
+GQV ++V + L +A WI GGW A L G +V VL
Sbjct: 116 EPLVGQVQEWMVAY-LETRLADWIHSSGGWAEFTALYGDGALEEARRLREGNWASVRTVL 174
Query: 196 -GVVLLGQFV-VRRFFKS 211
G V LG V V FF S
Sbjct: 175 TGAVALGALVTVGAFFAS 192
>gi|4757838 BCL2-associated X protein isoform beta [Homo sapiens]
Length = 218
Score = 55.5 bits (132), Expect = 3e-08
Identities = 37/136 (27%), Positives = 64/136 (47%), Gaps = 6/136 (4%)
Query: 47 QEAEGVAAPADPEMVTLPLQPSSTMGQVGRQLAIIGDDINRRYDSEFQTMLQHLQPTAEN 106
Q+ G PE+ P+ ++ ++ L IGD+++ + E Q M+ + ++
Sbjct: 32 QDRAGRMGGEAPELALDPVPQDASTKKLSECLKRIGDELDS--NMELQRMIAAVD--TDS 87
Query: 107 AYEYFTKIATSLFESG-INWGRVVALLGFGYRLALHVYQHGLTGFLGQVTRFVVDFMLHH 165
E F ++A +F G NWGRVVAL F +L L + + + + +DF+
Sbjct: 88 PREVFFRVAADMFSDGNFNWGRVVALFYFASKLVLKALCTKVPELIRTIMGWTLDFLRER 147
Query: 166 CIARWIAQRGGWVAAL 181
+ WI +GGWV L
Sbjct: 148 LLG-WIQDQGGWVRLL 162
>gi|20631958 BCL2-associated X protein isoform alpha [Homo sapiens]
Length = 192
Score = 54.3 bits (129), Expect = 7e-08
Identities = 37/149 (24%), Positives = 67/149 (44%), Gaps = 6/149 (4%)
Query: 47 QEAEGVAAPADPEMVTLPLQPSSTMGQVGRQLAIIGDDINRRYDSEFQTMLQHLQPTAEN 106
Q+ G PE+ P+ ++ ++ L IGD+++ + E Q M+ + ++
Sbjct: 32 QDRAGRMGGEAPELALDPVPQDASTKKLSECLKRIGDELDS--NMELQRMIAAVD--TDS 87
Query: 107 AYEYFTKIATSLFESG-INWGRVVALLGFGYRLALHVYQHGLTGFLGQVTRFVVDFMLHH 165
E F ++A +F G NWGRVVAL F +L L + + + + +DF+
Sbjct: 88 PREVFFRVAADMFSDGNFNWGRVVALFYFASKLVLKALCTKVPELIRTIMGWTLDFLRER 147
Query: 166 CIARWIAQRGGWVAALNLGNGPILNVLVV 194
+ WI +GGW L+ P + +
Sbjct: 148 LLG-WIQDQGGWDGLLSYFGTPTWQTVTI 175
>gi|242117893 BCL2-associated X protein isoform sigma [Homo sapiens]
Length = 179
Score = 53.9 bits (128), Expect = 1e-07
Identities = 35/136 (25%), Positives = 63/136 (46%), Gaps = 6/136 (4%)
Query: 47 QEAEGVAAPADPEMVTLPLQPSSTMGQVGRQLAIIGDDINRRYDSEFQTMLQHLQPTAEN 106
Q+ G PE+ P+ ++ ++ L IGD+++ + E Q M+ + ++
Sbjct: 32 QDRAGRMGGEAPELALDPVPQDASTKKLSECLKRIGDELDS--NMELQRMIAAVD--TDS 87
Query: 107 AYEYFTKIATSLFESG-INWGRVVALLGFGYRLALHVYQHGLTGFLGQVTRFVVDFMLHH 165
E F ++A +F G NWGRVVAL F +L L + + + + +DF+
Sbjct: 88 PREVFFRVAADMFSDGNFNWGRVVALFYFASKLVLKALCTKVPELIRTIMGWTLDFLRER 147
Query: 166 CIARWIAQRGGWVAAL 181
+ WI +GGW +
Sbjct: 148 LLG-WIQDQGGWTVTI 162
>gi|11386165 myeloid cell leukemia sequence 1 isoform 1 [Homo
sapiens]
Length = 350
Score = 52.0 bits (123), Expect = 4e-07
Identities = 41/165 (24%), Positives = 77/165 (46%), Gaps = 17/165 (10%)
Query: 17 PALPSASEEQVAQDTEEVFRSY--VFYRHQQEQEAEGVAAPADPEMVTLPLQPS-STMGQ 73
P+ P +EE+ +E++R + R+ +EQ A T P+ S +T +
Sbjct: 161 PSTPPPAEEE----EDELYRQSLEIISRYLREQ--------ATGAKDTKPMGRSGATSRK 208
Query: 74 VGRQLAIIGDDINRRYDSEFQTMLQHLQPTAENAYEYFTKIATSLFESGI-NWGRVVALL 132
L +GD + R +++ FQ ML+ L E+ + +++ +F G+ NWGR+V L+
Sbjct: 209 ALETLRRVGDGVQRNHETAFQGMLRKLDIKNEDDVKSLSRVMIHVFSDGVTNWGRIVTLI 268
Query: 133 GFGYRLALHVYQHGLTGFLGQVTRFVVDFMLHHCIARWIAQRGGW 177
FG +A H+ + + + D +L W+ ++ GW
Sbjct: 269 SFGAFVAKHLKTINQESCIEPLAESITD-VLVRTKRDWLVKQRGW 312
>gi|20631964 BCL2-associated X protein isoform delta [Homo sapiens]
Length = 143
Score = 45.4 bits (106), Expect = 3e-05
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Query: 109 EYFTKIATSLFESG-INWGRVVALLGFGYRLALHVYQHGLTGFLGQVTRFVVDFMLHHCI 167
E F ++A +F G NWGRVVAL F +L L + + + + +DF+ +
Sbjct: 41 EVFFRVAADMFSDGNFNWGRVVALFYFASKLVLKALCTKVPELIRTIMGWTLDFLRERLL 100
Query: 168 ARWIAQRGGWVAALNLGNGPILNVLVV 194
WI +GGW L+ P + +
Sbjct: 101 G-WIQDQGGWDGLLSYFGTPTWQTVTI 126
>gi|14210524 BCL2-related ovarian killer [Homo sapiens]
Length = 212
Score = 45.4 bits (106), Expect = 3e-05
Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 22/147 (14%)
Query: 73 QVGRQLAIIGDDINRRYDSEFQTMLQHLQPTAENAYEYFTKIATSLFESGINWGRVVALL 132
++G +L +I + R + LQ +P +A F +A +F +GI WG+VV+L
Sbjct: 72 RLGDELEMIRPSVYRNVARQLHISLQS-EPVVTDA---FLAVAGHIFSAGITWGKVVSLY 127
Query: 133 GFGYRLALHVYQ-------HGLTGFLGQVTRFVVDFMLHHCIARWIAQRGGWVAALN--L 183
LA+ + H L LG+ R +A W+ +RGGW L +
Sbjct: 128 AVAAGLAVDCVRQAQPAMVHALVDCLGEFVR--------KTLATWLRRRGGWTDVLKCVV 179
Query: 184 GNGP-ILNVLVVLGVVLLGQFVVRRFF 209
P + + +V + G+F+ FF
Sbjct: 180 STDPGLRSHWLVAALCSFGRFLKAAFF 206
>gi|168480072 BCL2-related protein A1 isoform 2 [Homo sapiens]
Length = 163
Score = 45.1 bits (105), Expect = 4e-05
Identities = 28/117 (23%), Positives = 55/117 (47%), Gaps = 6/117 (5%)
Query: 66 QPSSTMGQVGRQLAIIGDDINRRYDSEFQTMLQHLQPTA-ENAYEYFTKIATSLFESGI- 123
QP S + R L + + + + ++ L ++ + + A F ++ FE GI
Sbjct: 25 QPGSGPSKTSRVLQNVAFSVQKEVEKNLKSCLDNVNVVSVDTARTLFNQVMEKEFEDGII 84
Query: 124 NWGRVVALLGFGYRLALHVYQHGLTGFLG---QVTRFVVDFMLHHCIARWIAQRGGW 177
NWGR+V + F L + + + + +++ FV +F++++ WI Q GGW
Sbjct: 85 NWGRIVTIFAFEGILIKKLLRQQIAPDVDTYKEISYFVAEFIMNN-TGEWIRQNGGW 140
>gi|4757840 BCL2-related protein A1 isoform 1 [Homo sapiens]
Length = 175
Score = 45.1 bits (105), Expect = 4e-05
Identities = 28/117 (23%), Positives = 55/117 (47%), Gaps = 6/117 (5%)
Query: 66 QPSSTMGQVGRQLAIIGDDINRRYDSEFQTMLQHLQPTA-ENAYEYFTKIATSLFESGI- 123
QP S + R L + + + + ++ L ++ + + A F ++ FE GI
Sbjct: 25 QPGSGPSKTSRVLQNVAFSVQKEVEKNLKSCLDNVNVVSVDTARTLFNQVMEKEFEDGII 84
Query: 124 NWGRVVALLGFGYRLALHVYQHGLTGFLG---QVTRFVVDFMLHHCIARWIAQRGGW 177
NWGR+V + F L + + + + +++ FV +F++++ WI Q GGW
Sbjct: 85 NWGRIVTIFAFEGILIKKLLRQQIAPDVDTYKEISYFVAEFIMNN-TGEWIRQNGGW 140
>gi|15812178 zinc finger protein 36, C3H type-like 2 [Homo sapiens]
Length = 494
Score = 31.6 bits (70), Expect = 0.51
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 5/32 (15%)
Query: 40 FYRHQQEQEAEGVAAPADPEMVTLPLQPSSTM 71
+YR QQ+Q+ +G+A PA P P PS+T+
Sbjct: 391 YYRSQQQQQQQGLAPPAQP-----PAPPSATL 417
>gi|71040096 Rho GTPase activating protein 30 isoform 2 [Homo
sapiens]
Length = 890
Score = 31.2 bits (69), Expect = 0.67
Identities = 24/75 (32%), Positives = 31/75 (41%), Gaps = 9/75 (12%)
Query: 14 CGEPALPSASEEQVAQDTEEVFRSYVFYRHQQEQEAEGVAAPADPEMVTLPLQPSST--- 70
CG AL EEQ + E ++ R +EAEG P PE + QPS
Sbjct: 640 CGRQALGQGGEEQACWEVGEDKQAEPGGRLDIREEAEGTPQPPQPEEMEPEGQPSPDGCL 699
Query: 71 ------MGQVGRQLA 79
+G VG +LA
Sbjct: 700 CPCSLGLGGVGMRLA 714
>gi|31324577 molecule interacting with Rab13 [Homo sapiens]
Length = 863
Score = 30.4 bits (67), Expect = 1.1
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Query: 7 PGPPRQECGEPALPSASEEQVAQDTEEV-FRSYVFYRHQQEQEAEGVAAPADPEMVTLPL 65
PGPP Q+ + + + E+VAQ + S + ++E+E + APA P + T P
Sbjct: 392 PGPPSQDSRQ--VENGGTEEVAQPSPTASLESKPYNPFEEEEEDKEEEAPAAPSLATSPA 449
Query: 66 --QPSST 70
P ST
Sbjct: 450 LGHPEST 456
>gi|156938257 leucine rich repeat containing 16B [Homo sapiens]
Length = 1372
Score = 30.0 bits (66), Expect = 1.5
Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Query: 17 PALPSASEEQVAQDTEE-VFRSYVFYRHQQEQEAEGVAAPADPEMVTLPLQPSST 70
P P EE A D V + + QQ+QE V P DP T PL+P T
Sbjct: 1290 PQEPGVREEAEAGDAAPGVNKPRLRLSSQQDQEEPEVQGPPDPGRRTAPLKPKRT 1344
>gi|11545853 concentrative Na+-nucleoside cotransporter [Homo
sapiens]
Length = 691
Score = 29.3 bits (64), Expect = 2.6
Identities = 13/45 (28%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 158 VVDFMLHHCIARWIAQRGGWVAALNLGNGPILNVLVVLGVVLLGQ 202
V+ + + + +WI ++ GW+ + G+ PI +V V G + +GQ
Sbjct: 298 VMSMLYYLGLMQWIIRKVGWIMLVTTGSSPIESV-VASGNIFVGQ 341
>gi|22538461 nuclear receptor co-repressor 1 [Homo sapiens]
Length = 2440
Score = 28.5 bits (62), Expect = 4.4
Identities = 31/104 (29%), Positives = 44/104 (42%), Gaps = 14/104 (13%)
Query: 12 QECGEP--ALPSA-SEEQVAQDTEEVFRSYVFYRHQ-------QEQEAEGVAAPADPEMV 61
Q CG+ A PS S+E++ Q + V R Q Q+Q E A P +PE
Sbjct: 163 QPCGDDQNASPSKLSKEELIQSMDRVDREIAKVEQQILKLKKKQQQLEEEAAKPPEPEK- 221
Query: 62 TLPLQPSSTMGQVGRQLAIIGDDINRRYDSEFQTMLQHLQPTAE 105
P+ P + Q R + I D NR+ E + + L P E
Sbjct: 222 --PVSP-PPVEQKHRSIVQIIYDENRKKAEEAHKIFEGLGPKVE 262
>gi|187937179 apoptosis-associated tyrosine kinase [Homo sapiens]
Length = 1374
Score = 28.5 bits (62), Expect = 4.4
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 8/64 (12%)
Query: 6 GPGPPRQ--ECGEPALPSA------SEEQVAQDTEEVFRSYVFYRHQQEQEAEGVAAPAD 57
GPG PR P LP+A EE+ ++D++E Y Q+ E APA
Sbjct: 1135 GPGTPRAPLRLALPGLPAALEGRPEEEEEDSEDSDESDEELRCYSVQEPSEDSEEEAPAV 1194
Query: 58 PEMV 61
P +V
Sbjct: 1195 PVVV 1198
>gi|148727255 microtubule associated serine/threonine kinase family
member 4 isoform a [Homo sapiens]
Length = 2434
Score = 28.1 bits (61), Expect = 5.7
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 3/28 (10%)
Query: 7 PGPPRQECGEPALPSASEEQVAQDTEEV 34
PG P +E G+PALP E+ AQ+ EV
Sbjct: 805 PGDPHEEPGKPALP---PEECAQEEPEV 829
>gi|19718731 bromodomain-containing protein 4 isoform long [Homo
sapiens]
Length = 1362
Score = 27.7 bits (60), Expect = 7.4
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Query: 16 EPALPSA--SEEQVAQDTEEVFRSYVFYRHQQEQEAEGVAAPADPEMVTLPLQPSSTMGQ 73
E AL A + E+ + E+ + + QQ+Q+A VAA A P+ + QP S + Q
Sbjct: 1266 EDALEQARRAHEEARRRQEQQQQQRQEQQQQQQQQAAAVAAAATPQAQS--SQPQSMLDQ 1323
Query: 74 VGRQLAIIGDDINRRYDSEFQTMLQHLQPTAENAYE 109
R+LA + RR ++ T+ + Q + +E
Sbjct: 1324 -QRELARKREQERRRREAMAATIDMNFQSDLLSIFE 1358
>gi|56549645 nucleoporin 98kD isoform 4 [Homo sapiens]
Length = 1726
Score = 27.7 bits (60), Expect = 7.4
Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 16/84 (19%)
Query: 54 APADPEMVTLPLQ-------------PSSTMGQVGRQLAIIGDDINRRYDSEFQTMLQHL 100
AP P T PLQ S + Q+GR + + D ++ + TML+
Sbjct: 890 APLPPASQTTPLQMALNGKPAPPPQSQSPEVEQLGRVVELDSDMVDITQEPVLDTMLEES 949
Query: 101 QPTAENAYEYFTKIATSLFESGIN 124
P + T IA+SL GIN
Sbjct: 950 MPEDQEPVSASTHIASSL---GIN 970
>gi|21264365 nucleoporin 98kD isoform 1 [Homo sapiens]
Length = 1800
Score = 27.7 bits (60), Expect = 7.4
Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 16/84 (19%)
Query: 54 APADPEMVTLPLQ-------------PSSTMGQVGRQLAIIGDDINRRYDSEFQTMLQHL 100
AP P T PLQ S + Q+GR + + D ++ + TML+
Sbjct: 890 APLPPASQTTPLQMALNGKPAPPPQSQSPEVEQLGRVVELDSDMVDITQEPVLDTMLEES 949
Query: 101 QPTAENAYEYFTKIATSLFESGIN 124
P + T IA+SL GIN
Sbjct: 950 MPEDQEPVSASTHIASSL---GIN 970
>gi|27735045 peptidylprolyl isomerase-like 6 isoform 1 [Homo
sapiens]
Length = 311
Score = 27.3 bits (59), Expect = 9.7
Identities = 11/20 (55%), Positives = 12/20 (60%)
Query: 1 MASGQGPGPPRQECGEPALP 20
MA Q GPP CG P+LP
Sbjct: 1 MARPQPCGPPHARCGSPSLP 20
>gi|162329587 peptidylprolyl isomerase-like 6 isoform 2 [Homo
sapiens]
Length = 279
Score = 27.3 bits (59), Expect = 9.7
Identities = 11/20 (55%), Positives = 12/20 (60%)
Query: 1 MASGQGPGPPRQECGEPALP 20
MA Q GPP CG P+LP
Sbjct: 1 MARPQPCGPPHARCGSPSLP 20
>gi|109638745 transforming growth factor beta 1 induced transcript 1
isoform 1 [Homo sapiens]
Length = 461
Score = 27.3 bits (59), Expect = 9.7
Identities = 21/78 (26%), Positives = 32/78 (41%), Gaps = 9/78 (11%)
Query: 17 PALPSASEEQVAQDTEEVFRSYVFYRHQQEQEAEGVAAPADPEMVT-----LPLQPSST- 70
P LP AS + + + S +R Q A G P P +V+ P P T
Sbjct: 144 PGLPKASATSATLELDRLMASLSDFRVQNHLPASG---PTQPPVVSSTNEGSPSPPEPTG 200
Query: 71 MGQVGRQLAIIGDDINRR 88
G + L ++ D++RR
Sbjct: 201 KGSLDTMLGLLQSDLSRR 218
>gi|21361591 transforming growth factor beta 1 induced transcript 1
isoform 2 [Homo sapiens]
Length = 444
Score = 27.3 bits (59), Expect = 9.7
Identities = 21/78 (26%), Positives = 32/78 (41%), Gaps = 9/78 (11%)
Query: 17 PALPSASEEQVAQDTEEVFRSYVFYRHQQEQEAEGVAAPADPEMVT-----LPLQPSST- 70
P LP AS + + + S +R Q A G P P +V+ P P T
Sbjct: 127 PGLPKASATSATLELDRLMASLSDFRVQNHLPASG---PTQPPVVSSTNEGSPSPPEPTG 183
Query: 71 MGQVGRQLAIIGDDINRR 88
G + L ++ D++RR
Sbjct: 184 KGSLDTMLGLLQSDLSRR 201
>gi|139394599 hypermethylated in cancer 2 [Homo sapiens]
Length = 615
Score = 27.3 bits (59), Expect = 9.7
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
Query: 1 MASGQGPGPPRQECGEPALPSASEEQVAQDTEE 33
+ASG GP P GEP P EE+ +D E
Sbjct: 378 LASGAGPSGPY---GEPPYPCKEEEENGKDASE 407
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.138 0.421
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,590,111
Number of Sequences: 37866
Number of extensions: 373525
Number of successful extensions: 1344
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 1319
Number of HSP's gapped (non-prelim): 30
length of query: 211
length of database: 18,247,518
effective HSP length: 98
effective length of query: 113
effective length of database: 14,536,650
effective search space: 1642641450
effective search space used: 1642641450
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.