Guide to the Human Genome
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Name: BAX Sequence: fasta or formatted (192aa) NCBI GI: 20631958
Description:

BCL2-associated X protein isoform alpha

Referenced in:

BCL2 Pathways, Caspases, and Programmed Cell Death

Other entries for this name:
alt prot [143aa] BCL2-associated X protein isoform delta
alt prot [179aa] BCL2-associated X protein isoform sigma
alt prot [218aa] BCL2-associated X protein isoform beta
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.3         14           2
 C cysteine            1.0          2           1
 D aspartate           6.8         13           1
 E glutamate           5.2         10           1
 F phenylalanine       5.2         10           2
 G glycine            10.9         21           3
 H histidine           0.0          0           0
 I isoleucine          4.7          9           1
 K lysine              4.7          9           2
 L leucine            11.5         22           3
 M methionine          4.2          8           1
 N asparagine          1.6          3           1
 P proline             4.2          8           1
 Q glutamine           4.7          9           1
 R arginine            5.7         11           1
 S serine              5.7         11           2
 T threonine           6.8         13           1
 V valine              5.7         11           2
 W tryptophan          3.1          6           1
 Y tyrosine            1.0          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   BCL2-associated X protein isoform alpha 
BAX                   0.893   BCL2-associated X protein isoform sigma 
BAX                   0.814   BCL2-associated X protein isoform beta 
BAX                   0.664   BCL2-associated X protein isoform delta 
BCL2                  0.104   B-cell lymphoma protein 2 alpha isoform 
BCL2L1                0.101   BCL2-like 1 isoform 1 
BCL2                  0.096   B-cell lymphoma protein 2 beta isoform 
MCL1                  0.090   myeloid cell leukemia sequence 1 isoform 1 
BCL2L2                0.087   BCL2-like 2 protein 
BOK                   0.087   BCL2-related ovarian killer 
LOC100289713          0.085   PREDICTED: hypothetical protein XP_002348091 
BAK1                  0.079   BCL2-antagonist/killer 1 
BCL2A1                0.079   BCL2-related protein A1 isoform 1 
BCL2A1                0.071   BCL2-related protein A1 isoform 2 
BCL2L10               0.038   BCL2-like 10 (apoptosis facilitator) 
BCL2L14               0.025   BCL2-like 14 isoform 1 
BCL2L14               0.025   BCL2-like 14 isoform 1 
CLDN5                 0.016   claudin 5 
CLDN5                 0.016   claudin 5 
ARID1A                0.014   AT rich interactive domain 1A isoform a 
ARID1A                0.014   AT rich interactive domain 1A isoform b 
EIF2B2                0.014   eukaryotic translation initiation factor 2B, subunit ...
PKP3                  0.011   plakophilin 3 
SPDYE4                0.011   speedy homolog E4 
SPAG5                 0.008   sperm associated antigen 5 
CLDN19                0.005   claudin 19 isoform a 
CLDN19                0.005   claudin 19 isoform b 
C6orf222              0.005   hypothetical protein LOC389384 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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