Guide to the Human Genome
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Name: BAX Sequence: fasta or formatted (179aa) NCBI GI: 242117893
Description:

BCL2-associated X protein isoform sigma

Referenced in:

BCL2 Pathways, Caspases, and Programmed Cell Death

Other entries for this name:
alt prot [192aa] BCL2-associated X protein isoform alpha
alt prot [143aa] BCL2-associated X protein isoform delta
alt prot [218aa] BCL2-associated X protein isoform beta
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.8         14           2
 C cysteine            1.1          2           1
 D aspartate           6.7         12           1
 E glutamate           5.6         10           1
 F phenylalanine       5.0          9           2
 G glycine            10.6         19           3
 H histidine           0.0          0           0
 I isoleucine          5.0          9           1
 K lysine              5.0          9           2
 L leucine            11.2         20           3
 M methionine          4.5          8           1
 N asparagine          1.7          3           1
 P proline             3.9          7           1
 Q glutamine           4.5          8           1
 R arginine            6.1         11           1
 S serine              5.6         10           2
 T threonine           6.1         11           1
 V valine              6.1         11           2
 W tryptophan          2.8          5           1
 Y tyrosine            0.6          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   BCL2-associated X protein isoform sigma 
BAX                   0.970   BCL2-associated X protein isoform alpha 
BAX                   0.881   BCL2-associated X protein isoform beta 
BAX                   0.608   BCL2-associated X protein isoform delta 
BCL2                  0.098   B-cell lymphoma protein 2 alpha isoform 
BCL2L1                0.098   BCL2-like 1 isoform 1 
BOK                   0.098   BCL2-related ovarian killer 
BCL2                  0.095   B-cell lymphoma protein 2 beta isoform 
BCL2L2                0.092   BCL2-like 2 protein 
LOC100289713          0.089   PREDICTED: hypothetical protein XP_002348091 
BAK1                  0.086   BCL2-antagonist/killer 1 
BCL2A1                0.077   BCL2-related protein A1 isoform 2 
BCL2A1                0.077   BCL2-related protein A1 isoform 1 
MCL1                  0.074   myeloid cell leukemia sequence 1 isoform 1 
BCL2L14               0.021   BCL2-like 14 isoform 1 
BCL2L14               0.021   BCL2-like 14 isoform 1 
ARID1A                0.015   AT rich interactive domain 1A isoform a 
ARID1A                0.015   AT rich interactive domain 1A isoform b 
EIF2B2                0.015   eukaryotic translation initiation factor 2B, subunit ...
PKP3                  0.012   plakophilin 3 
SPDYE4                0.012   speedy homolog E4 
SPAG5                 0.009   sperm associated antigen 5 
C6orf222              0.006   hypothetical protein LOC389384 
RANBP2                0.006   RAN binding protein 2 
PEX19                 0.006   peroxisomal biogenesis factor 19 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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