Guide to the Human Genome
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Name: BCL2L1 Sequence: fasta or formatted (233aa) NCBI GI: 20336335
Description:

BCL2-like 1 isoform 1

Referenced in:

BCL2 Pathways, Caspases, and Programmed Cell Death

Other entries for this name:
alt prot [170aa] BCL2-like 1 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.0         21           3
 C cysteine            0.4          1           1
 D aspartate           4.3         10           1
 E glutamate           9.0         21           2
 F phenylalanine       5.6         13           2
 G glycine             7.7         18           2
 H histidine           1.7          4           1
 I isoleucine          2.6          6           1
 K lysine              2.6          6           1
 L leucine             8.2         19           2
 M methionine          2.6          6           1
 N asparagine          5.2         12           2
 P proline             3.0          7           1
 Q glutamine           4.3         10           1
 R arginine            6.0         14           2
 S serine              9.9         23           3
 T threonine           4.7         11           1
 V valine              7.7         18           2
 W tryptophan          3.0          7           1
 Y tyrosine            2.6          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   BCL2-like 1 isoform 1 
BCL2L1                0.506   BCL2-like 1 isoform 2 
BCL2                  0.342   B-cell lymphoma protein 2 alpha isoform 
BCL2                  0.309   B-cell lymphoma protein 2 beta isoform 
BCL2L2                0.298   BCL2-like 2 protein 
BAK1                  0.101   BCL2-antagonist/killer 1 
LOC100289713          0.098   PREDICTED: hypothetical protein XP_002348091 
BAX                   0.083   BCL2-associated X protein isoform alpha 
BAX                   0.081   BCL2-associated X protein isoform delta 
BAX                   0.074   BCL2-associated X protein isoform sigma 
BAX                   0.072   BCL2-associated X protein isoform beta 
MCL1                  0.067   myeloid cell leukemia sequence 1 isoform 1 
BOK                   0.067   BCL2-related ovarian killer 
BCL2A1                0.060   BCL2-related protein A1 isoform 1 
BCL2A1                0.060   BCL2-related protein A1 isoform 2 
BCL2L14               0.045   BCL2-like 14 isoform 1 
BCL2L14               0.045   BCL2-like 14 isoform 1 
BCL2L10               0.025   BCL2-like 10 (apoptosis facilitator) 
BCL2L13               0.020   BCL2-like 13 (apoptosis facilitator) 
DNAJC14               0.011   dopamine receptor interacting protein 
DCAF15                0.009   DDB1 and CUL4 associated factor 15 
CSPG5                 0.009   chondroitin sulfate proteoglycan 5 (neuroglycan C) ...
IKZF4                 0.007   zinc finger protein, subfamily 1A, 4 
MCCC1                 0.007   methylcrotonoyl-Coenzyme A carboxylase 1 (alpha) pr...
KLRC3                 0.007   killer cell lectin-like receptor subfamily C, member...
KLRC3                 0.007   killer cell lectin-like receptor subfamily C, member...
PIK3AP1               0.007   phosphoinositide-3-kinase adaptor protein 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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