Guide to the Human Genome
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Name: INTS5 Sequence: fasta or formatted (1019aa) NCBI GI: 44771201
Description:

integrator complex subunit 5

Referenced in:

Polyadenylation

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.6        108           3
 C cysteine            2.3         23           2
 D aspartate           3.1         32           1
 E glutamate           5.2         53           3
 F phenylalanine       3.3         34           2
 G glycine             9.7         99           3
 H histidine           4.3         44           2
 I isoleucine          2.5         25           2
 K lysine              1.5         15           1
 L leucine            15.5        158           4
 M methionine          1.0         10           1
 N asparagine          1.3         13           1
 P proline             8.4         86           5
 Q glutamine           4.4         45           2
 R arginine            6.0         61           2
 S serine              8.4         86           3
 T threonine           3.6         37           2
 V valine              7.0         71           2
 W tryptophan          1.2         12           1
 Y tyrosine            0.7          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   integrator complex subunit 5 
GPR150                0.006   G protein-coupled receptor 150 
AHDC1                 0.005   AT hook, DNA binding motif, containing 1 
EP400                 0.005   E1A binding protein p400 
MYPOP                 0.005   Myb protein P42POP 
IGSF9                 0.005   immunoglobulin superfamily, member 9 isoform a [Hom...
IGSF9                 0.005   immunoglobulin superfamily, member 9 isoform b [Hom...
YBX2                  0.005   Y box binding protein 2 
RNF19B                0.005   ring finger protein 19B isoform a 
RNF19B                0.005   ring finger protein 19B isoform b 
ANKRD43               0.005   ankyrin repeat domain 43 
RELA                  0.004   v-rel reticuloendotheliosis viral oncogene homolog ...
RELA                  0.004   v-rel reticuloendotheliosis viral oncogene homolog ...
AKT1S1                0.004   AKT1 substrate 1 (proline-rich) 
AKT1S1                0.004   AKT1 substrate 1 (proline-rich) 
AKT1S1                0.004   AKT1 substrate 1 (proline-rich) 
COL8A1                0.004   alpha 1 type VIII collagen precursor 
COL8A1                0.004   alpha 1 type VIII collagen precursor 
KLF16                 0.004   BTE-binding protein 4 
LOC100291609          0.004   PREDICTED: hypothetical protein XP_002346061 
SLC22A6               0.004   solute carrier family 22 member 6 isoform b 
SLC22A6               0.004   solute carrier family 22 member 6 isoform a 
MAP1A                 0.004   microtubule-associated protein 1A 
SALL3                 0.004   sal-like 3 
ABI1                  0.004   abl-interactor 1 isoform a 
MED25                 0.004   mediator complex subunit 25 
LRP10                 0.004   low density lipoprotein receptor-related protein 10 ...
KIF3C                 0.004   kinesin family member 3C 
BCL9L                 0.004   B-cell CLL/lymphoma 9-like 
JUND                  0.004   jun D proto-oncogene 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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